The package provides biomarker selection for several classification methods: the lasso/elastic net, PCLDA, PLSDA, and several t-tests. Two approaches are provided, one based on the stability of model coefficients under perturbation, and the other on higher criticism.
| Version: | 0.4.2 |
| Depends: | pls, glmnet, MASS, st (≥ 1.1.6) |
| Published: | 2014-08-06 |
| Author: | Ron Wehrens, Pietro Franceschi |
| Maintainer: | Ron Wehrens <ron.wehrens at gmail.com> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | no |
| Citation: | BioMark citation info |
| Materials: | NEWS |
| In views: | ChemPhys |
| CRAN checks: | BioMark results |
| Reference manual: | BioMark.pdf |
| Package source: | BioMark_0.4.2.tar.gz |
| Windows binaries: | r-devel: BioMark_0.4.2.zip, r-release: BioMark_0.4.2.zip, r-oldrel: BioMark_0.4.2.zip |
| OS X Snow Leopard binaries: | r-release: BioMark_0.4.2.tgz, r-oldrel: BioMark_0.4.2.tgz |
| OS X Mavericks binaries: | r-release: BioMark_0.4.2.tgz |
| Old sources: | BioMark archive |