CNprep: pre-process DNA copy number (CN) data for detection of CN events
The package evaluates DNA copy number data, using both
their intitial form (copy number as a noisy function of genomic
position) and their approximation by a piecewise-constant
function (segmentation), for the purpose of identifying genomic
regions where the copy number differs from the norm.
| Version: |
1.0 |
| Depends: |
R (≥ 2.10), parallel, mclust, rlecuyer |
| Published: |
2013-06-20 |
| Author: |
Alex Krasnitz, Guoli Sun |
| Maintainer: |
Guoli Sun <gsun at cshl.edu> |
| License: |
GPL-2 |
| NeedsCompilation: |
no |
| CRAN checks: |
CNprep results |
Downloads: