Last updated on 2014-10-10 15:49:21.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.0 | 1.20 | 34.33 | 35.53 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 2.0 | 1.05 | 33.30 | 34.35 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 2.0 | 70.64 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 2.0 | 63.06 | NOTE | |||
| r-devel-osx-x86_64-clang | 2.0 | 74.44 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 2.0 | 4.00 | 52.00 | 56.00 | NOTE | |
| r-patched-linux-x86_64 | 2.0 | 1.12 | 38.26 | 39.38 | NOTE | |
| r-patched-solaris-sparc | 2.0 | 487.90 | NOTE | |||
| r-patched-solaris-x86 | 2.0 | 102.60 | NOTE | |||
| r-release-linux-ix86 | 2.0 | 1.53 | 47.80 | 49.33 | NOTE | |
| r-release-linux-x86_64 | 2.0 | 1.08 | 36.48 | 37.56 | NOTE | |
| r-release-osx-x86_64-mavericks | 2.0 | NOTE | ||||
| r-release-osx-x86_64-snowleopard | 2.0 | NOTE | ||||
| r-release-windows-ix86+x86_64 | 2.0 | 6.00 | 55.00 | 61.00 | NOTE | |
| r-oldrel-windows-ix86+x86_64 | 2.0 | 4.00 | 56.00 | 60.00 | NOTE |
Version: 2.0
Check: top-level files
Result: NOTE
Non-standard file/directory found at top level:
‘doc’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 2.0
Check: dependencies in R code
Result: NOTE
'library' or 'require' calls to packages already attached by Depends:
‘tcltk’ ‘tkrplot’
Please remove these calls from your code.
See the information on DESCRIPTION files in the chapter ‘Creating R
packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 2.0
Check: R code for possible problems
Result: NOTE
cleavogram : savecleavogram : savefic: warning in jpeg(file =
filename): partial argument match of ‘file’ to ‘filename’
read.coord: no visible binding for global variable ‘Filters’
Found the following assignments to the global environment:
File ‘SyNet/R/cleavogram.r’:
assign(tclvalue(outpartition), rslt, pos = 1)
File ‘SyNet/R/creategrid.r’:
assign(ReturnVal, outobj, envir = .GlobalEnv)
File ‘SyNet/R/dotinfer.r’:
assign(tclvalue(outputname), out, envir = .GlobalEnv)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64
Version: 2.0
Check: Rd line widths
Result: NOTE
Rd file 'SyNet-package.rd':
\examples lines wider than 100 characters:
# Run NAM method on the previously inferred sympatry network
Rd file 'acshgral.rd':
\examples lines wider than 100 characters:
#Display relationships into a parenthetical notation. You can track the indices of the species in the
Rd file 'gridinfer.rd':
\examples lines wider than 100 characters:
#are nested inside it. In a network analysis this kind of element will behave as intermediary node.
Rd file 'reweight.rd':
\examples lines wider than 100 characters:
plot(unlist(ej),unlist(reweight(ej)), xlab = "Input matrix", ylab = "Reweighted matrix", main = "First reweighting")
These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 2.0
Check: R code for possible problems
Result: NOTE
cleavogram : savecleavogram : savefic: warning in jpeg(file =
filename): partial argument match of 'file' to 'filename'
read.coord: no visible binding for global variable ‘Filters’
Flavors: r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard
Version: 2.0
Check: R code for possible problems
Result: NOTE
cleavogram : savecleavogram : savefic: warning in jpeg(file =
filename): partial argument match of 'file' to 'filename'
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64