Last updated on 2014-10-10 15:48:49.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.0 | 9.46 | 96.87 | 106.33 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.1.0 | 8.96 | 94.28 | 103.25 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.1.0 | 250.20 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.0 | 237.68 | NOTE | |||
| r-devel-osx-x86_64-clang | 1.1.0 | 205.95 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 1.1.0 | 28.00 | 141.00 | 169.00 | NOTE | |
| r-patched-linux-x86_64 | 1.1.0 | 8.19 | 98.79 | 106.98 | NOTE | |
| r-patched-solaris-sparc | 1.1.0 | 1283.20 | NOTE | |||
| r-patched-solaris-x86 | 1.1.0 | 335.80 | NOTE | |||
| r-release-linux-ix86 | 1.1.0 | 9.56 | 119.74 | 129.30 | NOTE | |
| r-release-linux-x86_64 | 1.1.0 | 9.64 | 98.92 | 108.55 | NOTE | |
| r-release-osx-x86_64-mavericks | 1.1.0 | ERROR | ||||
| r-release-osx-x86_64-snowleopard | 1.1.0 | ERROR | ||||
| r-release-windows-ix86+x86_64 | 1.1.0 | 32.00 | 145.00 | 177.00 | NOTE | |
| r-oldrel-windows-ix86+x86_64 | 1.1.0 | 20.00 | 126.00 | 146.00 | NOTE |
Version: 1.1.0
Check: dependencies in R code
Result: NOTE
Packages in Depends field not imported from:
‘RColorBrewer’ ‘beadarray’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
See the information on DESCRIPTION files in the chapter ‘Creating R
packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 1.1.0
Check: R code for possible problems
Result: NOTE
beadtypeFilter: no visible global function definition for ‘exprs’
beadtypeFilter: no visible global function definition for ‘se.exprs’
beadtypeFilter: no visible global function definition for ‘beadNum’
beadtypeFilter: no visible global function definition for ‘fData’
emCDF: no visible global function definition for ‘brewer.pal’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64
Version: 1.1.0
Check: Rd line widths
Result: NOTE
Rd file 'iccFun.Rd':
\examples lines wider than 100 characters:
aaa<-na.omit(data.frame(I(rownames(exprs(exampleSummaryDataNorm))),exprs(exampleSummaryDataNorm)))[1:40,]
These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 1.1.0
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
‘beadarrayExampleData’ ‘lumi’
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard
Version: 1.1.0
Check: whether package can be installed
Result: ERROR
Installation failed.
Flavor: r-release-osx-x86_64-mavericks
Version: 1.1.0
Check: R code for possible problems
Result: NOTE
beadtypeFilter: no visible global function definition for ‘beadNum’
Flavor: r-release-osx-x86_64-snowleopard
Version: 1.1.0
Check: examples
Result: ERROR
Running examples in ‘beadarrayFilter-Ex.R’ failed
The error most likely occurred in:
> ### Name: MLM.beadarray
> ### Title: Multi-level Mixed model
> ### Aliases: MLM.beadarray
> ### Keywords: differential expression
>
> ### ** Examples
>
> require(beadarrayExampleData)
Loading required package: beadarrayExampleData
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
there is no package called ‘beadarrayExampleData’
> data(exampleSummaryData)
Warning in data(exampleSummaryData) :
data set ‘exampleSummaryData’ not found
> exampleSummaryDatalog2 <- channel(exampleSummaryData, "G")[1:40,]
Error in channel(exampleSummaryData, "G") :
error in evaluating the argument 'object' in selecting a method for function 'channel': Error: object 'exampleSummaryData' not found
Execution halted
Flavor: r-release-osx-x86_64-snowleopard