RbioRXN is an R package that facilitates retrieving and processing biochemical reaction data such as Rhea, MetaCyc, KEGG and Unipathway. The package provides the functions to download and parse data, instantiate generic reaction and check mass-balance. The package aims to construct an integrated metabolic network and genome-scale metabolic model.
| Version: |
1.3.1 |
| Depends: |
R (≥ 3.0.3), fmcsR |
| Imports: |
plyr, RCurl, gdata, KEGGREST, data.table, stringr |
| Published: |
2014-07-30 |
| Author: |
Byoungnam Min, Byeonghyuk Park, Kyoung Heon Kim and In-Geol Choi |
| Maintainer: |
Byoungnam Min <mbnmbn00 at gmail.com> |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: |
no |
| CRAN checks: |
RbioRXN results |