adegenet: adegenet: an R package for the exploratory analysis of genetic and genomic data

Classes and functions for genetic data analysis within the multivariate framework.

Version: 1.4-2
Depends: R (≥ 2.14), methods, ade4
Imports: utils, stats, MASS, igraph, ape, shiny, ggplot2
Suggests: genetics, spdep, tripack, pegas, seqinr, adehabitat, parallel, akima, maps, splancs, hierfstat
Published: 2014-05-13
Author: Thibaut Jombart, Caitlin Collins, Peter Solymos, Ismail Ahmed, Federico Calboli, Anne Cori
Maintainer: Thibaut Jombart <t.jombart at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
Citation: adegenet citation info
Materials: ChangeLog
In views: Genetics
CRAN checks: adegenet results


Reference manual: adegenet.pdf
Package source: adegenet_1.4-2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X Snow Leopard binaries: r-release: adegenet_1.4-2.tgz, r-oldrel: adegenet_1.4-2.tgz
OS X Mavericks binaries: r-release: adegenet_1.4-2.tgz
Old sources: adegenet archive

Reverse dependencies:

Reverse depends: mmod, pegas, PopGenReport, poppr
Reverse imports: adephylo, AFLPsim, outbreaker, StAMPP
Reverse suggests: hierfstat, HWxtest, memgene, polysat