Performs clustering of haplotypes that ought to share a common ancestor. It is based on the similarity measures of every pair of haplotypes using a sliding window along the genome.
| Version: | 1.2 |
| Depends: | R (≥ 2.14), ggplot2, grid |
| Suggests: | RHmm |
| Published: | 2013-07-05 |
| Author: | Damien Leroux [aut, cre], Brigitte Mangin [aut], Sylvain Jasson [aut], Abdelaziz Rahmani [aut] |
| Maintainer: | Damien Leroux <damien.leroux at toulouse.inra.fr> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | http://www.r-project.org, https://mulcyber.toulouse.inra.fr/projects/clusthaplo/ |
| NeedsCompilation: | no |
| CRAN checks: | clusthaplo results |
| Reference manual: | clusthaplo.pdf |
| Package source: | clusthaplo_1.2.tar.gz |
| Windows binaries: | r-devel: clusthaplo_1.2.zip, r-release: clusthaplo_1.2.zip, r-oldrel: clusthaplo_1.2.zip |
| OS X Snow Leopard binaries: | r-release: clusthaplo_1.2.tgz, r-oldrel: clusthaplo_1.2.tgz |
| OS X Mavericks binaries: | r-release: clusthaplo_1.2.tgz |
| Old sources: | clusthaplo archive |