pegas: Population and Evolutionary Genetics Analysis System

pegas provides functions for reading, writing, plotting, analysing, and manipulating allelic and haplotypic data, and for the analysis of population nucleotide sequences and micro-satellites including coalescence analyses.

Version: 0.6
Depends: R (≥ 2.6.0), ape (≥ 2.4), adegenet
Imports: graphics, utils
Published: 2014-08-21
Author: Emmanuel Paradis [aut, cre, cph], Klaus Schliep [aut, cph], Alastair Potts [aut, cph], David Winter [aut, cph]
Maintainer: Emmanuel Paradis <Emmanuel.Paradis at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
Citation: pegas citation info
Materials: NEWS
In views: Phylogenetics
CRAN checks: pegas results


Reference manual: pegas.pdf
Vignettes: Reading Files
Package source: pegas_0.6.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X Snow Leopard binaries: r-release: pegas_0.6.tgz, r-oldrel: pegas_0.6.tgz
OS X Mavericks binaries: r-release: pegas_0.6.tgz
Old sources: pegas archive

Reverse dependencies:

Reverse depends: mmod, spider, StAMPP
Reverse imports: PopGenReport, poppr
Reverse suggests: adegenet