phylobase: Base package for phylogenetic structures and comparative data

Provides a base S4 class for comparative methods, incorporating one or more trees and trait data

Version: 0.6.8
Depends: grid
Imports: ade4, ape (≥ 3.0), Rcpp (≥ 0.11.0), methods
LinkingTo: Rcpp
Suggests: MASS, testthat (≥ 0.8.1), RUnit
Published: 2014-03-20
Author: R Hackathon et al. (alphabetically: Ben Bolker, Marguerite Butler, Peter Cowan, Damien de Vienne, Dirk Eddelbuettel, Mark Holder, Thibaut Jombart, Steve Kembel, Francois Michonneau, David Orme, Brian O'Meara, Emmanuel Paradis, Jim Regetz, Derrick Zwickl)
Maintainer: Francois Michonneau <francois.michonneau at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
Materials: NEWS
In views: Phylogenetics
CRAN checks: phylobase results


Reference manual: phylobase.pdf
Vignettes: A developers guide for contributing to phylobase
phylo4: classes and methods for phylogenetic trees and data
Package source: phylobase_0.6.8.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X Snow Leopard binaries: r-release: phylobase_0.6.5.2.tgz, r-oldrel: phylobase_0.6.8.tgz
OS X Mavericks binaries: r-release: phylobase_0.6.8.tgz
Old sources: phylobase archive

Reverse dependencies:

Reverse depends: BioGeoBEARS, phyext, phyloTop
Reverse imports: adephylo, PCPS
Reverse enhances: phyext