Predicts presence of signal peptides in eukaryotic protein using hidden semi-Markov models. The implemented algorithm can be accessed both from command line and GUI.
| Version: | 1.1 |
| Depends: | R (≥ 3.0.0) |
| Imports: | seqinr, shiny |
| Suggests: | knitr, markdown, shinyAce |
| Published: | 2014-09-29 |
| Author: | Michal Burdukiewicz [cre, aut], Piotr Sobczyk [aut] |
| Maintainer: | Michal Burdukiewicz <michalburdukiewicz at gmail.com> |
| License: | GPL-3 |
| URL: | https://github.com/michbur/signal.hsmm |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | signal.hsmm results |
| Reference manual: | signal.hsmm.pdf |
| Package source: | signal.hsmm_1.1.tar.gz |
| Windows binaries: | r-devel: signal.hsmm_1.1.zip, r-release: signal.hsmm_1.1.zip, r-oldrel: signal.hsmm_1.1.zip |
| OS X Snow Leopard binaries: | r-release: signal.hsmm_1.1.tgz, r-oldrel: signal.hsmm_1.1.tgz |
| OS X Mavericks binaries: | r-release: signal.hsmm_1.1.tgz |
| Old sources: | signal.hsmm archive |