CRAN Package Check Results for Package apTreeshape

Last updated on 2015-02-05 23:50:18.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.4-5 1.18 58.41 59.58 NOTE
r-devel-linux-x86_64-debian-gcc 1.4-5 1.14 56.84 57.98 NOTE
r-devel-linux-x86_64-fedora-clang 1.4-5 123.51 NOTE
r-devel-linux-x86_64-fedora-gcc 1.4-5 116.91 NOTE
r-devel-osx-x86_64-clang 1.4-5 102.54 NOTE
r-devel-windows-ix86+x86_64 1.4-5 6.00 98.00 104.00 OK
r-patched-linux-x86_64 1.4-5 1.43 62.74 64.16 NOTE
r-patched-solaris-sparc 1.4-5 830.40 OK
r-patched-solaris-x86 1.4-5 147.40 OK
r-release-linux-ix86 1.4-5 1.84 74.16 76.00 NOTE
r-release-linux-x86_64 1.4-5 1.43 62.07 63.50 NOTE
r-release-osx-x86_64-mavericks 1.4-5 OK
r-release-osx-x86_64-snowleopard 1.4-5 WARN
r-release-windows-ix86+x86_64 1.4-5 7.00 100.00 107.00 OK
r-oldrel-windows-ix86+x86_64 1.4-5 6.00 102.00 108.00 OK

Check Details

Version: 1.4-5
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     all.equal.treeshape all.equal.treeshape as.phylo.treeshape
     as.treeshape.phylo as.treeshape.treebalance plot.treeshape
     summary.treeshape
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang

Version: 1.4-5
Check: Rd line widths
Result: NOTE
    Rd file 'shift.test.Rd':
     \examples lines wider than 100 characters:
     pv <- sapply(1:135, FUN = function(i) shift.test(tree.birds, i, lambda1 = 1, lambda2 = 100, nrep = 1000, silent = TRUE))
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64

Version: 1.4-5
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     as.treeshape.phylo as.treeshape.treebalance all.equal.treeshape
     summary.treeshape plot.treeshape as.phylo.treeshape
     all.equal.treeshape
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.4-5
Check: examples
Result: WARN
    checking a package with encoding 'latin1' in an ASCII locale
    
     OK
Flavor: r-release-osx-x86_64-snowleopard