Last updated on 2015-02-05 23:51:05.
Package | ERROR | WARN | NOTE | OK |
---|---|---|---|---|
ade4 | 1 | 14 | ||
seqinr | 6 | 9 |
Current CRAN status: WARN: 1, NOTE: 14
Version: 1.6-2
Check: installed package size
Result: NOTE
installed size is 5.4Mb
sub-directories of 1Mb or more:
data 1.5Mb
pictures 2.1Mb
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 1.6-2
Check: dependencies in R code
Result: NOTE
'library' or 'require' calls in package code:
‘MASS’ ‘pixmap’ ‘spdep’ ‘splancs’ ‘waveslim’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64
Version: 1.6-2
Check: S3 generic/method consistency
Result: NOTE
Found the following apparent S3 methods exported but not registered:
kplot.sepan.coa
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang
Version: 1.6-2
Check: R code for possible problems
Result: NOTE
prep.mdpcoa : fun1: no visible global function definition for
‘dist.dna’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64
Version: 1.6-2
Check: compiled code
Result: NOTE
File ‘ade4/libs/ade4.so’:
Found ‘rand’, possibly from ‘rand’ (C)
Object: ‘adesub.o’
Found ‘srand’, possibly from ‘srand’ (C)
Object: ‘adesub.o’
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86
Version: 1.6-2
Check: compiled code
Result: NOTE
File ‘ade4/libs/ade4.so’:
Found ‘_rand’, possibly from ‘rand’ (C)
Object: ‘adesub.o’
Found ‘_srand’, possibly from ‘srand’ (C)
Object: ‘adesub.o’
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-osx-x86_64-clang, r-release-osx-x86_64-mavericks
Version: 1.6-2
Check: compiled code
Result: NOTE
File 'ade4/libs/i386/ade4.dll':
Found 'rand', possibly from 'rand' (C)
Object: 'adesub.o'
Found 'srand', possibly from 'srand' (C)
Object: 'adesub.o'
File 'ade4/libs/x64/ade4.dll':
Found 'rand', possibly from 'rand' (C)
Object: 'adesub.o'
Found 'srand', possibly from 'srand' (C)
Object: 'adesub.o'
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.
See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavor: r-devel-windows-ix86+x86_64
Version: 1.6-2
Check: compiled code
Result: NOTE
File ‘ade4/libs/ade4.so’:
Found ‘rand’, possibly from ‘rand’ (C)
Object: ‘adesub.o’
Found ‘srand’, possibly from ‘srand’ (C)
Object: ‘adesub.o’
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the C RNG.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-release-linux-ix86, r-release-linux-x86_64
Version: 1.6-2
Check: examples
Result: WARN
checking a package with encoding 'UTF-8' in an ASCII locale
OK
Flavor: r-release-osx-x86_64-snowleopard
Version: 1.6-2
Check: compiled code
Result: NOTE
File 'ade4/libs/i386/ade4.dll':
Found 'rand', possibly from 'rand' (C)
Object: 'adesub.o'
Found 'srand', possibly from 'srand' (C)
Object: 'adesub.o'
File 'ade4/libs/x64/ade4.dll':
Found 'rand', possibly from 'rand' (C)
Object: 'adesub.o'
Found 'srand', possibly from 'srand' (C)
Object: 'adesub.o'
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the C RNG.
See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavor: r-release-windows-ix86+x86_64
Current CRAN status: NOTE: 6, OK: 9
Version: 3.1-3
Check: dependencies in R code
Result: NOTE
'library' or 'require' call to ‘segmented’ in package code.
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64
Version: 3.1-3
Check: S3 generic/method consistency
Result: NOTE
Found the following apparent S3 methods exported but not registered:
as.matrix.alignment getAnnot.SeqAcnucWeb getAnnot.SeqFastaAA
getAnnot.SeqFastadna getAnnot.default getAnnot.list getAnnot.logical
getAnnot.qaw getFrag.SeqAcnucWeb getFrag.SeqFastaAA
getFrag.SeqFastadna getFrag.SeqFrag getFrag.character getFrag.default
getFrag.list getFrag.logical getFrag.qaw getKeyword.SeqAcnucWeb
getKeyword.default getKeyword.list getKeyword.logical getKeyword.qaw
getLength.SeqAcnucWeb getLength.SeqFastaAA getLength.SeqFastadna
getLength.SeqFrag getLength.character getLength.default
getLength.list getLength.logical getLength.qaw
getLocation.SeqAcnucWeb getLocation.default getLocation.list
getLocation.logical getLocation.qaw getName.SeqAcnucWeb
getName.SeqFastaAA getName.SeqFastadna getName.SeqFrag
getName.default getName.list getName.logical getName.qaw
getSequence.SeqAcnucWeb getSequence.SeqFastaAA
getSequence.SeqFastadna getSequence.SeqFrag getSequence.character
getSequence.default getSequence.list getSequence.logical
getSequence.qaw getTrans.SeqAcnucWeb getTrans.SeqFastadna
getTrans.SeqFrag getTrans.character getTrans.default getTrans.list
getTrans.logical getTrans.qaw plot.SeqAcnucWeb print.SeqAcnucWeb
print.qaw summary.SeqFastaAA summary.SeqFastadna
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang
Version: 3.1-3
Check: S3 generic/method consistency
Result: NOTE
Found the following apparent S3 methods exported but not registered:
getAnnot.SeqAcnucWeb getAnnot.SeqFastaAA getAnnot.SeqFastadna
getAnnot.default getAnnot.list getAnnot.logical getAnnot.qaw
getFrag.SeqAcnucWeb getFrag.SeqFastaAA getFrag.SeqFastadna
getFrag.SeqFrag getFrag.character getFrag.default getFrag.list
getFrag.logical getFrag.qaw getKeyword.SeqAcnucWeb getKeyword.default
getKeyword.list getKeyword.logical getKeyword.qaw
getLength.SeqAcnucWeb getLength.SeqFastaAA getLength.SeqFastadna
getLength.SeqFrag getLength.character getLength.default
getLength.list getLength.logical getLength.qaw
getLocation.SeqAcnucWeb getLocation.default getLocation.list
getLocation.logical getLocation.qaw getName.SeqAcnucWeb
getName.SeqFastaAA getName.SeqFastadna getName.SeqFrag
getName.default getName.list getName.logical getName.qaw
getSequence.SeqAcnucWeb getSequence.SeqFastaAA
getSequence.SeqFastadna getSequence.SeqFrag getSequence.character
getSequence.default getSequence.list getSequence.logical
getSequence.qaw getTrans.SeqAcnucWeb getTrans.SeqFastadna
getTrans.SeqFrag getTrans.character getTrans.default getTrans.list
getTrans.logical getTrans.qaw as.matrix.alignment print.SeqAcnucWeb
print.qaw summary.SeqFastaAA summary.SeqFastadna plot.SeqAcnucWeb
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc