RDML

RDML

Imports qPCR data from RDML v1.1 format files (Lefever et al. 2009) and transforms it to the appropriate format of the qpcR package (Ritz et al. 2008, Spiess et al. 2008) or chiPCR package. RDML is the recommended file format element in the Minimum Information for Publication of Quantitative Real-Time PCR Experiments (MIQE) guidelines (Bustin et al. 2009). Data can be imported to the one table format (flat) or list of tables spited by PCR targets and samples types. Tables consist of 'Cycles' in the first column and fluorescence data of the samples in the remaining columns for qPCR data. For melting data tables consist of 'Temperature' in the first column and fluorescence data of the samples in the remaining columns.

Installation

You can install the latest development version of the code using the devtools R package.

# Install devtools, if you haven't already.
install.packages("devtools")

library(devtools)
install_github("RDML", "kablag")