Rcell

Microscopy Based Cytometry Data Analysis Package for R

A package to analyze microscopy based cytometry datasets. It was originally design for Cell-ID, but can be adapted to other image segmentation programs. It includes functions for loading, manipulating and plotting the data. It can also create automatic image montages of cells in a user defined layout.

To install or update, run:

install.packages("Rcell")
source("http://bioconductor.org/biocLite.R")
biocLite("EBImage")

To get started read the vignette:

vignette("Rcell")