gtx: Genetics ToolboX
Assorted tools for genetic association analyses. The
current focus is on implementing (either exactly or
approximately) regression analyses using summary statistics
instead of using subject-specific data. So far, functions
exist to support multi-SNP risk score analyses, multi-SNP
conditional regression analyses, and multi-phenotype analyses,
using summary statistics. There are helper functions for
reading and manipulating subject-specific genotype data, which
provide a platform for calculating the summary statistics, or
for using R to conduct other analyses not supported by specific
GWAS analysis tools.
| Version: |
0.0.8 |
| Depends: |
R (≥ 2.4.0), survival |
| Published: |
2013-01-11 |
| Author: |
Toby Johnson |
| Maintainer: |
Toby Johnson <Toby.x.Johnson at gsk.com> |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: |
no |
| Materials: |
ChangeLog |
| CRAN checks: |
gtx results |
Downloads: