nodiv: Compares the Distribution of Sister Clades Through a Phylogeny

An implementation of the nodiv algorithm, (see Borregaard, M.K., Rahbek, C., Fjeldsaa, J., Parra, J.L., Whittaker, R.J. & Graham, C.H. 2014. Node-based analysis of species distributions. Methods in Ecology and Evolution 5(11): 1225-1235. DOI: 10.1111/2041-210X.12283. Package for phylogenetic analysis of species distributions. The main function goes through each node in the phylogeny, compares the distributions of the two descendant nodes, and compares the result to a null model. This highlights nodes where major distributional divergence have occurred. The distributional divergence for these nodes is mapped using the SOS statistic.

Version: 1.0.1
Depends: R (≥ 3.0)
Imports: picante, raster, ape, sp, vegan
Suggests: RColorBrewer, parallel, testthat
Published: 2015-01-06
Author: Michael Krabbe Borregaard
Maintainer: Michael Krabbe Borregaard <mkborregaard at snm.ku.dk>
License: GPL-2
NeedsCompilation: no
Citation: nodiv citation info
CRAN checks: nodiv results

Downloads:

Reference manual: nodiv.pdf
Package source: nodiv_1.0.1.tar.gz
Windows binaries: r-devel: nodiv_1.0.1.zip, r-release: nodiv_1.0.1.zip, r-oldrel: nodiv_1.0.1.zip
OS X Snow Leopard binaries: r-release: nodiv_1.0.1.tgz, r-oldrel: nodiv_1.0.1.tgz
OS X Mavericks binaries: r-release: nodiv_1.0.1.tgz
Old sources: nodiv archive