Date | Package | Title |
---|---|---|

2015-04-24 | DiceKriging | Kriging Methods for Computer Experiments |

2015-04-24 | maptools | Tools for Reading and Handling Spatial Objects |

2015-04-24 | mma | Multiple Mediation Analysis |

2015-04-24 | PBSmapping | Mapping Fisheries Data and Spatial Analysis Tools |

2015-04-24 | RCurl | General network (HTTP/FTP/...) client interface for R |

2015-04-24 | rfordummies | Code Examples to Accompany the Book "R for Dummies" |

2015-04-24 | RJafroc | Analysis of Data Acquired Using the Receiver Operating Characteristic Paradigm and Its Extensions |

2015-04-24 | RRTCS | Randomized Response Techniques for Complex Surveys |

2015-04-24 | sp | Classes and Methods for Spatial Data |

2015-04-24 | spacetime | Classes and Methods for Spatio-Temporal Data |

2015-04-24 | tsDyn | Nonlinear Time Series Models with Regime Switching |

2015-04-23 | aqp | Algorithms for Quantitative Pedology |

2015-04-23 | drgee | Doubly Robust Generalized Estimating Equations |

2015-04-23 | geoR | Analysis of Geostatistical Data |

2015-04-23 | knitr | A General-Purpose Package for Dynamic Report Generation in R |

2015-04-23 | LinRegInteractive | Interactive Interpretation of Linear Regression Models |

2015-04-23 | monitoR | Acoustic Template Detection in R |

2015-04-23 | plotKML | Visualization of Spatial and Spatio-temporal Objects in Google Earth |

2015-04-23 | soilDB | Soil Database Interface |

2015-04-22 | bootSVD | Fast, Exact Bootstrap Principal Component Analysis for High Dimensional Data |

2015-04-22 | broman | Karl Broman's R Code |

2015-04-22 | cellranger | Translate Spreadsheet Cell Ranges to Rows and Columns |

2015-04-22 | discSurv | Discrete Time Survival Analysis |

2015-04-22 | effsize | Efficient Effect Size Computation |

2015-04-22 | emg | Exponentially Modified Gaussian (EMG) Distribution |

2015-04-22 | GCD | Global Charcoal Database |

2015-04-22 | genderizeR | Gender Prediction Based on First Names |

2015-04-22 | gnm | Generalized Nonlinear Models |

2015-04-22 | GSIF | Global Soil Information Facilities |

2015-04-22 | logmult | Log-Multiplicative Models, Including Association Models |

2015-04-22 | mapStats | Geographic Display of Survey Data Statistics |

2015-04-22 | markdown | 'Markdown' Rendering for R |

2015-04-22 | mclust | Normal Mixture Modelling for Model-Based Clustering, Classification, and Density Estimation |

2015-04-22 | MRIaggr | Management, Display, and Processing of Medical Imaging Data |

2015-04-22 | NAM | Nested Association Mapping Analysis |

2015-04-22 | paleofire | Analysis of Charcoal Records from the Global Charcoal Database |

2015-04-22 | probemod | Statistical Tools for Probing Moderation Effects |

2015-04-22 | QuantifQuantile | Estimation of Conditional Quantiles using Optimal Quantization |

2015-04-22 | RadOnc | Analytical Tools for Radiation Oncology |

2015-04-22 | Rdistance | Distance Sampling Analyses |

2015-04-22 | rplexos | Read and Analyze PLEXOS Solutions |

2015-04-22 | rversions | Query R Versions, Including r-release and r-oldrel |

2015-04-22 | seedy | Simulation of Evolutionary and Epidemiological Dynamics |

2015-04-22 | shinydashboard | Create Dashboards with 'Shiny' |

2015-04-22 | shinyjs | Perform Common JavaScript Operations in Shiny Apps using Plain R Code |

2015-04-22 | sjPlot | Data Visualization for Statistics in Social Science |

2015-04-22 | sspse | Estimating Hidden Population Size using Respondent Driven Sampling Data |

2015-04-22 | TickExec | Execution Functions for Tick Data Back Test |

2015-04-22 | treeperm | Exact and Asymptotic K Sample Permutation Test |

2015-04-22 | visreg | Visualization of Regression Models |

2015-04-22 | zoib | Bayesian Inference for Beta Regression and Zero/One Inflated Beta Regression |

2015-04-21 | aoos | Another Object Orientation System |

2015-04-21 | blockmodels | Latent and Stochastic Block Model Estimation by a 'V-EM' Algorithm |

2015-04-21 | causaleffect | Deriving Expressions of Joint Interventional Distributions in Causal Models |

2015-04-21 | dfcomb | Phase I/II Adaptive Dose-Finding Design for Combination Studies |

2015-04-21 | dfmta | Phase I/II Adaptive Dose-Finding Design For MTA |

2015-04-21 | DNAprofiles | DNA Profiling Evidence Analysis |

2015-04-21 | ensurer | Ensure Values at Runtime |

2015-04-21 | evaluate | Parsing and Evaluation Tools that Provide More Details than the Default |

2015-04-21 | formatR | Format R Code Automatically |

2015-04-21 | GENLIB | Genealogical Data Analysis |

2015-04-21 | GUILDS | Implementation of Sampling Formulas for the Unified Neutral Model of Biodiversity and Biogeography, with or without Guild Structure |

2015-04-21 | GWRM | Generalized Waring Regression Model for Count Data |

2015-04-21 | highr | Syntax Highlighting for R Source Code |

2015-04-21 | htmlTable | Advanced Tables for Markdown/HTML |

2015-04-21 | icd9 | Tools for Working with ICD-9 Codes, and Finding Comorbidities |

2015-04-21 | indicspecies | Relationship Between Species and Groups of Sites |

2015-04-21 | lmomco | L-moments, Censored L-moments, Trimmed L-moments, L-comoments, and Many Distributions |

2015-04-21 | managelocalrepo | Manage a CRAN-Style Local Repository |

2015-04-21 | nLTT | Calculate the NLTT Statistic |

2015-04-21 | plyr | Tools for Splitting, Applying and Combining Data |

2015-04-21 | R2jags | Using R to Run 'JAGS' |

2015-04-21 | R2MLwiN | Running 'MLwiN' from Within R |

2015-04-21 | RcppArmadillo | Rcpp Integration for the Armadillo Templated Linear Algebra Library |

2015-04-21 | RDML | Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files |

2015-04-21 | readGenalex | Read, Write, Manipulate and Convert GenAlEx-Format Genotype Files |

2015-04-21 | RMySQL | Database Interface and MySQL Driver for R |

2015-04-21 | sitar | Super Imposition by Translation and Rotation Growth Curve Analysis |

2015-04-21 | sotkanet | Tools for Sotkanet Open Data Portal |

2015-04-21 | treatSens | Sensitivity Analysis for Causal Inference |

2015-04-20 | ABCanalysis | Computed ABC Analysis |

2015-04-20 | ADPclust | Fast Clustering Using Adaptive Density Peak Detection |

2015-04-20 | bayescount | Power Calculations and Bayesian Analysis of Count Distributions and FECRT Data using MCMC |

2015-04-20 | carcass | Estimation of the Number of Fatalities from Carcass Searches |

2015-04-20 | crunch | Crunch.io Data Tools |

2015-04-20 | Frames2 | Estimation in Dual Frame Surveys |

2015-04-20 | fscaret | Automated Feature Selection from 'caret' |

2015-04-20 | futile.logger | A Logging Utility for R |

2015-04-20 | gcmr | Gaussian Copula Marginal Regression |

2015-04-20 | GMCM | Fast Estimation of Gaussian Mixture Copula Models |

2015-04-20 | GWLelast | Geographically Weighted Logistic Elastic Net Regression |

2015-04-20 | highlight | Syntax Highlighter |

2015-04-20 | icamix | Estimation of ICA Mixture Models |

2015-04-20 | LeafArea | Rapid Digital Image Analysis of Leaf Area |

2015-04-20 | lmerTest | Tests in Linear Mixed Effects Models |

2015-04-20 | mbest | Moment-Based Estimation for Hierarchical Models |

2015-04-20 | oro.dicom | Rigorous - DICOM Input / Output |

2015-04-20 | prevalence | Tools for Prevalence Assessment Studies |

2015-04-20 | qwraps2 | Quick Wraps 2 |

2015-04-20 | RandomFieldsUtils | Utilities for the Simulation and Analysis of Random Fields |

2015-04-20 | RANN | Fast Nearest Neighbour Search (Wraps Arya and Mount's ANN Library) |

2015-04-20 | rLiDAR | LiDAR Data Processing and Visualization |

2015-04-20 | RSocrata | Download 'Socrata' Data Sets as R Data Frames |

2015-04-20 | solaR | Radiation and Photovoltaic Systems |

2015-04-20 | sparkTable | Sparklines and Graphical Tables for TeX and HTML |

2015-04-20 | synRNASeqNet | Synthetic RNA-Seq Network Generation and Mutual Information Estimates |

2015-04-20 | TestScorer | GUI for Entering Test Items and Obtaining Raw and Transformed Scores |

2015-04-20 | userfriendlyscience | Quantitative Analysis Made Accessible |

2015-04-20 | weirs | A Hydraulics Package to Compute Open-Channel Flow over Weirs |

2015-04-20 | xml2 | Parse XML |

2015-04-19 | BDgraph | Graph Estimation Based on Birth-Death MCMC Approach |

2015-04-19 | BNPTSclust | A Bayesian Nonparametric Algorithm for Time Series Clustering |

2015-04-19 | candisc | Visualizing Generalized Canonical Discriminant and Canonical Correlation Analysis |

2015-04-19 | degreenet | Models for Skewed Count Distributions Relevant to Networks |

2015-04-19 | gemtc | Network Meta-Analysis Using Bayesian Methods |

2015-04-19 | hitandrun | "Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes |

2015-04-19 | mixtools | Tools for Analyzing Finite Mixture Models |

2015-04-19 | phonR | Tools for Phoneticians and Phonologists |

2015-04-19 | PortfolioAnalytics | Portfolio Analysis, Including Numerical Methods for Optimization of Portfolios |

2015-04-19 | R1magic | Compressive Sampling: Sparse Signal Recovery Utilities |

2015-04-19 | SKAT | SNP-Set (Sequence) Kernel Association Test |

2015-04-19 | tdr | Target Diagram |

2015-04-19 | timeSeq | Nonparallel Differential Expressed Genes |

2015-04-19 | WikipediaR | R-Based Wikipedia Client |

2015-04-18 | BivarP | Estimating the Parameters of Some Bivariate Distributions |

2015-04-18 | bold | Interface to Bold Systems API |

2015-04-18 | cheddar | Analysis and Visualisation of Ecological Communities |

2015-04-18 | cna | A Package for Coincidence Analysis (CNA) |

2015-04-18 | crimelinkage | Statistical Methods for Crime Series Linkage |

2015-04-18 | daff | Diff, Patch and Merge for Data.frames |

2015-04-18 | datacheck | Tools for Checking Data Consistency |

2015-04-18 | eHOF | Extended HOF (Huisman-Olff-Fresco) Models |

2015-04-18 | gbm2sas | Convert GBM Object Trees to SAS Code |

2015-04-18 | heplots | Visualizing Hypothesis Tests in Multivariate Linear Models |

2015-04-18 | KFAS | Kalman Filter and Smoother for Exponential Family State Space Models |

2015-04-18 | Luminescence | Comprehensive Luminescence Dating Data Analysis |

2015-04-18 | MATA | Model-Averaged Tail Area Wald (MATA-Wald) Confidence Interval |

2015-04-18 | NPC | Nonparametric Combination of Hypothesis Tests |

2015-04-18 | plaqr | Partially Linear Additive Quantile Regression |

2015-04-18 | sjmisc | Miscellaneous Data Management Tools |

2015-04-18 | sprex | Calculate Species Richness and Extrapolation Metrics |

2015-04-18 | SSDforR | Functions to Analyze Single System Data |

2015-04-18 | SSN | Spatial Modeling on Stream Networks |

2015-04-18 | TDCor | Gene Network Inference from Time-Series Transcriptomic Data |

2015-04-18 | TKF | Pairwise Distance Estimation with TKF91 and TKF92 Model |

2015-04-18 | vegdata | Access Vegetation Databases and Treat Taxonomy |

2015-04-17 | marl | Multivariate Analysis Based on Relative Likelihoods |

2015-04-17 | TDMR | Tuned Data Mining in R |

2015-04-17 | VLMC | Variable Length Markov Chains ('VLMC') Models |

2015-04-16 | BAT | Biodiversity Assessment Tools |

2015-04-16 | BiodiversityR | Package for Community Ecology and Suitability Analysis |

2015-04-16 | compendiumdb | Tools for Retrieval and Storage of Functional Genomics Data |

2015-04-16 | copCAR | Fitting the copCAR Regression Model for Discrete Areal Data |

2015-04-16 | dga | Capture-Recapture Estimation using Bayesian Model Averaging |

2015-04-16 | etasFLP | Mixed FLP and ML Estimation of ETAS Space-Time Point Processes |

2015-04-16 | iterpc | Efficient Iterator for Permutations and Combinations |

2015-04-16 | letsR | Tools for Data Handling and Analysis in Macroecology |

2015-04-16 | LindenmayeR | Functions to Explore L-Systems (Lindenmayer Systems) |

2015-04-16 | lsmeans | Least-Squares Means |

2015-04-16 | mi | Missing Data Imputation and Model Checking |

2015-04-16 | multimark | Capture-Mark-Recapture Analysis using Multiple Non-Invasive Marks |

2015-04-16 | networksis | Simulate Bipartite Graphs with Fixed Marginals Through Sequential Importance Sampling |

2015-04-16 | poweRlaw | Analysis of Heavy Tailed Distributions |

2015-04-16 | qclust | Robust Estimation of Gaussian Mixture Models |

2015-04-16 | RAdwords | Loading Google Adwords Data into R |

2015-04-16 | smoother | Functions Relating to the Smoothing of Numerical Data |

2015-04-16 | softclassval | Soft Classification Performance Measures |

2015-04-16 | vcdExtra | 'vcd' Extensions and Additions |

2015-04-15 | apex | Phylogenetic Methods for Multiple Gene Data |

2015-04-15 | boxr | Interface for the 'Box.com API' |

2015-04-15 | cernn | Covariance Estimation Regularized by Nuclear Norm Penalties |

2015-04-15 | chillR | Statistical Methods for Phenology Analysis in Temperate Fruit Trees |

2015-04-15 | CoClust | Copula Based Cluster Analysis |

2015-04-15 | cold | Count Longitudinal Data |

2015-04-15 | domino | R Console Bindings for the 'Domino Command-Line Client' |

2015-04-15 | embryogrowth | Tools to Analyze the Thermal Reaction Norm of Embryo Growth |

2015-04-15 | forecTheta | Forecasting Time Series by Theta Method |

2015-04-15 | ggtern | An Extension to 'ggplot2', for the Creation of Ternary Diagrams |

2015-04-15 | knockoff | Knockoff Filter for Controlling the False Discovery Rate |

2015-04-15 | lctools | Local Correlation, Spatial Inequalities and Other Tools |

2015-04-15 | multiway | Component Models for Multi-Way Data |

2015-04-15 | rainbow | Rainbow Plots, Bagplots and Boxplots for Functional Data |

2015-04-15 | rdrop2 | Programmatic Interface to the Dropbox API |

2015-04-15 | REST | RcmdrPlugin Easy Script Templates |

2015-04-15 | rjags | Bayesian Graphical Models using MCMC |

2015-04-15 | rmaf | Refined Moving Average Filter |

2015-04-15 | roxygen2 | In-Source Documentation for R |

2015-04-15 | runjags | Interface Utilities, Model Templates, Parallel Computing Methods and Additional Distributions for MCMC Models in JAGS |

2015-04-15 | SPRT | Wald's Sequential Probability Ratio Test |

2015-04-15 | sse | Sample Size Estimation |

2015-04-15 | survMisc | Miscellaneous Functions for Survival Data |

2015-04-15 | tolerance | Functions for Calculating Tolerance Intervals |

2015-04-14 | ade4 | Analysis of Ecological Data : Exploratory and Euclidean Methods in Environmental Sciences |

2015-04-14 | adegraphics | An S4 Lattice-Based Package for the Representation of Multivariate Data |

2015-04-14 | bild | BInary Longitudinal Data |

2015-04-14 | CRTSize | Sample Size Estimation Functions for Cluster Randomized Trials |

2015-04-14 | descr | Descriptive Statistics |

2015-04-14 | drc | Analysis of Dose-Response Curves |

2015-04-14 | dummy | Automatic Creation of Dummies with Support for Predictive Modeling |

2015-04-14 | EGRET | Exploration and Graphics for RivEr Trends (EGRET) |

2015-04-14 | flexsurv | Flexible Parametric Survival and Multi-State Models |

2015-04-14 | gamlr | Gamma Lasso Regression |

2015-04-14 | InvariantCausalPrediction | Invariant Causal Prediction |

2015-04-14 | lucid | Lucid Printing of Floating Point Numbers |

2015-04-14 | MissMech | Testing Homoscedasticity, Multivariate Normality, and Missing Completely at Random |

2015-04-14 | openair | Tools for the Analysis of Air Pollution Data |

2015-04-14 | PGRdup | Discover Probable Duplicates in Plant Genetic Resources (PGR) Collections |

2015-04-14 | RcppParallel | Parallel Programming Tools for Rcpp |

2015-04-14 | readxl | Read Excel Files |

2015-04-14 | Rvcg | Manipulations of Triangular Meshes Based on the VCGLIB API |

2015-04-14 | sivipm | Sensitivity Indices with Dependent Inputs |

2015-04-14 | TSdist | Distance Measures for Time Series Data |

2015-04-13 | apc | Age-Period-Cohort Analysis |

2015-04-13 | ASMap | Linkage Map Construction using the MSTmap Algorithm |

2015-04-13 | cancerTiming | Estimation of Temporal Ordering of Cancer Abnormalities |

2015-04-13 | fCertificates | Basics of Certificates and Structured Products Valuation |

2015-04-13 | geeM | Fit Generalized Estimating Equations |

2015-04-13 | HiddenMarkov | Hidden Markov Models |

2015-04-13 | HiLMM | Estimation of Heritability in Linear Mixed Models |

2015-04-13 | inline | Functions to Inline C, C++, Fortran Function Calls from R |

2015-04-13 | L1pack | Routines for L1 Estimation |

2015-04-13 | lfe | Linear Group Fixed Effects |

2015-04-13 | metacom | Analysis of the "Elements of Metacommunity Structure" |

2015-04-13 | NbClust | Determining the Best Number of Clusters in a Data Set |

2015-04-13 | PtProcess | Time Dependent Point Process Modelling |

2015-04-13 | R2admb | 'ADMB' to R Interface Functions |

2015-04-13 | ramify | Additional Matrix Functionality |

2015-04-13 | retrosheet | Import Professional Baseball Data from 'Retrosheet' |

2015-04-13 | rkafka | Using Apache 'Kafka' Messaging Queue Through 'R' |

2015-04-13 | rstackdeque | Persistent Fast Amortized Stack and Queue Data Structures |

2015-04-13 | settings | Software Option Settings Manager for R |

2015-04-13 | smds | Symbolic Multidimensional Scaling |

2015-04-13 | spartan | Simulation Parameter Analysis R Toolkit ApplicatioN: Spartan |

2015-04-13 | subselect | Selecting Variable Subsets |

2015-04-12 | csrplus | Methods to Test Hypotheses on the Distribution of Spatial Point Processes |

2015-04-12 | EpiModel | Mathematical Modeling of Infectious Disease |

2015-04-12 | glmnet | Lasso and Elastic-Net Regularized Generalized Linear Models |

2015-04-12 | GUTS | Fast Calculation of the Likelihood of a Stochastic Survival Model |

2015-04-12 | heatmap3 | An Improved Heatmap Package |

2015-04-12 | mongolite | Streaming 'MongoDB' Client for R |

2015-04-12 | MPV | Data Sets from Montgomery, Peck and Vining's Book |

2015-04-12 | queueing | Analysis of Queueing Networks and Models |

2015-04-12 | resample | Resampling Functions |

2015-04-12 | saturnin | Spanning Trees Used for Network Inference |

2015-04-11 | bayesPop | Probabilistic Population Projection |

2015-04-11 | discreteRV | Create and Manipulate Discrete Random Variables |

2015-04-11 | esaBcv | Estimate Number of Latent Factors and Factor Matrix for Factor Analysis |

2015-04-11 | fdth | Frequency Distribution Tables, Histograms and Polygons |

2015-04-11 | geosphere | Spherical Trigonometry |

2015-04-11 | jsonlite | A Robust, High Performance JSON Parser and Generator for R |

2015-04-11 | lvm4net | Latent Variable Models for Networks |

2015-04-11 | MIIVsem | Two Stage Least Squares with Model Implied Instremental Search |

2015-04-11 | msSurv | Nonparametric Estimation for Multistate Models |

2015-04-11 | mvmesh | Multivariate Meshes and Histograms in Arbitrary Dimensions |

2015-04-11 | peptider | Evaluation of Diversity in Nucleotide Libraries |

2015-04-11 | raster | Geographic Data Analysis and Modeling |

2015-04-11 | rivervis | River Visualisation Tool |

2015-04-11 | scrm | Simulating the Evolution of Biological Sequences |

2015-04-11 | soilphysics | Soil Physical Analysis |

2015-04-11 | VIFCP | Detecting Change-Points via VIFCP Method |

2015-04-11 | wppExplorer | Explorer of World Population Prospects |

2015-04-10 | AID | Estimation of Box-Cox Power Transformation Parameter |

2015-04-10 | BayesLCA | Bayesian Latent Class Analysis |

2015-04-10 | bentcableAR | Bent-Cable Regression for Independent Data or Autoregressive Time Series |

2015-04-10 | chipPCR | Toolkit of Helper Functions to Pre-Process Amplification Data |

2015-04-10 | cocor | Comparing Correlations |

2015-04-10 | dataRetrieval | Retrieval Functions for USGS and EPA Hydrologic and Water Quality Data |

2015-04-10 | data.tree | Hierarchical Data Structures |

2015-04-10 | drat | Drat R Archive Template |

2015-04-10 | gtools | Various R Programming Tools |

2015-04-10 | hiddenf | The All-Configurations, Maximum-Interaction F-Test for Hidden Additivity |

2015-04-10 | import | An Import Mechanism for R |

2015-04-10 | leafletR | Interactive Web-Maps Based on the Leaflet JavaScript Library |

2015-04-10 | nnlasso | Non-Negative Lasso and Elastic Net Penalized Generalized Linear Models |

2015-04-10 | pocrm | Dose Finding in Drug Combination Phase I Trials Using PO-CRM |

2015-04-10 | qrng | (Randomized) Quasi-Random Number Generators |

2015-04-10 | rkafkajars | External Jars Required for Package 'rkafka' |

2015-04-10 | sdcTable | Methods for Statistical Disclosure Control in Tabular Data |

2015-04-10 | SemiMarkov | Multi-States Semi-Markov Models |

2015-04-10 | seroincidence | Estimating Infection Rates from Serological Data |

2015-04-10 | Thermimage | Functions for Handling Thermal Images |

2015-04-09 | biosignalEMG | Standard Processing Tools for Electromyogram Signals |

2015-04-09 | crayon | Colored Terminal Output |

2015-04-09 | denovolyzeR | Statistical Analyses of De Novo Genetic Variants |

2015-04-09 | dpcR | Digital PCR Analysis |

2015-04-09 | emov | Eye Movement Analysis Package for Fixation and Saccade Detection |

2015-04-09 | expsmooth | Data Sets from "Forecasting with Exponential Smoothing" |

2015-04-09 | falsy | Define Truthy and Falsy Values |

2015-04-09 | groupRemMap | Regularized Multivariate Regression for Identifying Master Predictors Using the GroupRemMap Penalty |

2015-04-09 | haven | Import SPSS, Stata and SAS Files |

2015-04-09 | igraphdata | A Collection of Network Data Sets for the Igraph Package |

2015-04-09 | isa2 | The Iterative Signature Algorithm |

2015-04-09 | phenology | Tools to Manage a Parametric Function that Describes Phenology |

2015-04-09 | reader | Suite of Functions to Flexibly Read Data from Files |

2015-04-09 | readr | Read Tabular Data |

2015-04-08 | CIDnetworks | Generative Models for Complex Networks with Conditionally Independent Dyadic Structure |

2015-04-08 | ClickClust | Model-Based Clustering of Categorical Sequences |

2015-04-08 | corHMM | Analysis of Binary Character Evolution |

2015-04-08 | cqrReg | Quantile, Composite Quantile Regression and Regularized Versions |

2015-04-08 | DVHmetrics | Analyze Dose-Volume Histograms and Check Constraints |

2015-04-08 | hsdar | Manage, Analyse and Simulate Hyperspectral Data in R |

2015-04-08 | nanop | Tools for Nanoparticle Simulation and Calculation of PDF and Total Scattering Structure Function |

2015-04-08 | NCmisc | Miscellaneous Functions for Creating Adaptive Functions and Scripts |

2015-04-08 | pairsD3 | D3 Scatterplot Matrices |

2015-04-08 | partykit | A Toolkit for Recursive Partytioning |

2015-04-08 | pendensity | Density Estimation with a Penalized Mixture Approach |

2015-04-08 | phangorn | Phylogenetic Analysis in R |

2015-04-08 | PhyloMeasures | Fast and Exact Algorithms for Computing Phylogenetic Biodiversity Measures |

2015-04-08 | rSPACE | Spatially-Explicit Power Analysis for Conservation and Ecology |

2015-04-08 | RxnSim | Functions to Compute Chemical Reaction Similarity |

2015-04-08 | searchable | Tools for Custom Searches / Subsets / Slices of Named R Objects |

2015-04-08 | softImpute | Matrix Completion via Iterative Soft-Thresholded SVD |

2015-04-08 | TriMatch | Propensity Score Matching of Non-Binary Treatments |

2015-04-08 | TROM | Transcriptome Overlap Measure |

2015-04-08 | TSPred | Functions for Baseline-Based Time Series Prediction |

2015-04-08 | wux | Wegener Center Climate Uncertainty Explorer |

2015-04-07 | arm | Data Analysis Using Regression and Multilevel/Hierarchical Models |

2015-04-07 | BGLR | Bayesian Generalized Linear Regression |

2015-04-07 | Deriv | Symbolic Differentiation |

2015-04-07 | dygraphs | Interface to Dygraphs Interactive Time Series Charting Library |

2015-04-07 | Formula | Extended Model Formulas |

2015-04-07 | gProfileR | Interface to the 'g:Profiler' Toolkit |

2015-04-07 | HelpersMG | Tools for Earth Meteorological Analysis |

2015-04-07 | lpSolve | Interface to 'Lp_solve' v. 5.5 to Solve Linear/Integer Programs |

2015-04-07 | network | Classes for Relational Data |

2015-04-07 | pssm | Piecewise Exponential Model for Time to Progression and Time from Progression to Death |

2015-04-07 | quanteda | Quantitative Analysis of Textual Data |

2015-04-07 | R2OpenBUGS | Running OpenBUGS from R |

2015-04-07 | rcorpora | A Collection of Small Text Corpora of Interesting Data |

2015-04-07 | rehh | Searching for Footprints of Selection using Haplotype Homozygosity Based Tests |

2015-04-07 | rstudioapi | Safely Access the RStudio API |

2015-04-07 | StereoMorph | Stereo Camera Calibration and Reconstruction |

2015-04-06 | BBEST | Bayesian Estimation of Incoherent Neutron Scattering Backgrounds |

2015-04-06 | lavaan | Latent Variable Analysis |

2015-04-06 | ngramrr | A Simple General Purpose N-Gram Tokenizer |

2015-04-06 | qdapDictionaries | Dictionaries and Word Lists for the 'qdap' Package |

2015-04-06 | qdapRegex | Regular Expression Removal, Extraction, and Replacement Tools |

2015-04-06 | repfdr | Replicability Analysis for Multiple Studies of High Dimension |

2015-04-05 | bda | Density Estimation for Grouped Data |

2015-04-05 | LakeMetabolizer | Tools for the Analysis of Ecosystem Metabolism |

2015-04-05 | mvngGrAd | Moving Grid Adjustment in Plant Breeding Field Trials |

2015-04-05 | RcppRoll | Efficient Rolling / Windowed Operations |

2015-04-05 | rLakeAnalyzer | Package for the Analysis of Lake Physics |

2015-04-05 | zooaRch | Analytical Tools for Zooarchaeological Data |

2015-04-04 | EFDR | Wavelet-Based Enhanced FDR for Signal Detection in Noisy Images |

2015-04-04 | ISOcodes | Selected ISO Codes |

2015-04-04 | Matrix | Sparse and Dense Matrix Classes and Methods |

2015-04-04 | MixAll | Clustering using Mixture Models |

2015-04-04 | pitchRx | Tools for Harnessing MLBAM Gameday Data and Visualizing PITCHf/x |

2015-04-04 | rebmix | Rough - Enhanced - Bayesian Finite Mixture Modeling |

2015-04-04 | SOUP | Stochastic Ordering Using Permutations (and Pairwise Comparisons) |

2015-04-04 | timeseriesdb | Manage Time Series with R and PostgreSQL |

2015-04-03 | EcoSimR | Null Model Analysis for Ecological Data |

2015-04-03 | fpCompare | Reliable Comparison of Floating Point Numbers |

2015-04-03 | hgm | Holonomic Gradient Method and Gradient Descent |

2015-04-03 | matchingMarkets | An R Package for the Analysis of Stable Matchings |

2015-04-03 | mnormt | The Multivariate Normal and t Distributions |

2015-04-03 | nleqslv | Solve Systems of Nonlinear Equations |

2015-04-03 | ODMconverter | Tools to Convert ODM Files |

2015-04-03 | relSim | Relative Simulator |

2015-04-03 | RKEA | R/KEA Interface |

2015-04-03 | RKEAjars | R/KEA Interface Jars |

2015-04-03 | shapeR | Collection and Analysis of Otolith Shape Data |

2015-04-03 | stcm | Tools for Inference with Set-Theoretic Comparative Methods |

2015-04-03 | TAM | Test Analysis Modules |

2015-04-03 | thsls | Three-Stage Least Squares Estimation for Systems of Simultaneous Equations |

2015-04-03 | V8 | Embedded JavaScript Engine |

2015-04-03 | wq | Exploring Water Quality Monitoring Data |

2015-04-02 | Bmix | Bayesian Sampling for Stick-Breaking Mixtures |

2015-04-02 | DiffCorr | Analyzing and Visualizing Differential Correlation Networks in Biological Data |

2015-04-02 | distrom | Distributed Multinomial Regression |

2015-04-02 | geoBayes | Analysis of Geostatistical Data using Bayes and Empirical Bayes Methods |

2015-04-02 | geomorph | Geometric Morphometric Analyses of 2d/3D Landmark Data |

2015-04-02 | GPfit | Gaussian Processes Modeling |

2015-04-02 | HighDimOut | Outlier Detection Algorithms for High-Dimensional Data |

2015-04-02 | maptpx | MAP Estimation of Topic Models |

2015-04-02 | MCMC4Extremes | Posterior Distribution of Extreme Value Models in R |

2015-04-02 | mra | Analysis of Mark-Recapture Data |

2015-04-02 | mutoss | Unified Multiple Testing Procedures |

2015-04-02 | PermAlgo | Permutational Algorithm to Simulate Survival Data |

2015-04-02 | Rarity | Calculation of Rarity Indices for Species and Assemblages of Species |

2015-04-02 | sglasso | Lasso Method for RCON(V,E) Models |

2015-04-02 | sybilccFBA | Cost Constrained FLux Balance Analysis: MetabOlic Modeling with ENzyme kineTics (MOMENT) |

2015-04-01 | CARBayes | Spatial Areal Unit Modelling |

2015-04-01 | decompr | Global Value Chains Decomposition (Wang-Wei-Zhu and Leontief) |

2015-04-01 | FlexParamCurve | Tools to Fit Flexible Parametric Curves |

2015-04-01 | gazepath | Gazepath Transforms Eye-Tracking Data into Fixations and Saccades |

2015-04-01 | GenOrd | Simulation of Ordinal and Discrete Variables with Given Correlation Matrix and Marginal Distributions |

2015-04-01 | HarmonicRegression | Harmonic Regression to One or more Time Series |

2015-04-01 | KMDA | Kernel-Based Metabolite Differential Analysis |

2015-04-01 | Laterality | Functions to Calculate Common Laterality Statistics in Primatology |

2015-04-01 | npbr | Nonparametric Boundary Regression |

2015-04-01 | PopVar | Genomic Breeding Tools: Genetic Variance Prediction and Cross-Validation |

2015-04-01 | preseqR | Predicting Species Accumulation Curves |

2015-04-01 | rivr | Steady and Unsteady Open-Channel Flow Computation |

2015-04-01 | scidb | An R Interface to SciDB |

2015-04-01 | SWMPr | Retrieving, Organizing, and Analyzing Estuary Monitoring Data |

2015-04-01 | textir | Inverse Regression for Text Analysis |

2015-04-01 | TimeWarp | Date Calculations and Manipulation |

2015-04-01 | track | Store Objects on Disk Automatically |

2015-03-31 | bayesGDS | Scalable Rejection Sampling for Bayesian Hierarchical Models |

2015-03-31 | BrailleR | Improved Access for Blind Users |

2015-03-31 | CARBayesdata | Data Sets Used in the Vignette Accompanying the CARBayes Package |

2015-03-31 | DatABEL | File-Based Access to Large Matrices Stored on HDD in Binary Format |

2015-03-31 | EMMREML | Fitting Mixed Models with Known Covariance Structures |

2015-03-31 | episensr | Basic Sensitivity Analysis of Epidemiological Results |

2015-03-31 | GenSA | Functions for Generalized Simulated Annealing |

2015-03-31 | gvc | Global Value Chains Tools |

2015-03-31 | longclust | Model-Based Clustering and Classification for Longitudinal Data |

2015-03-31 | MatchingFrontier | Computation of the Balance - Sample Size Frontier in Matching Methods for Causal Inference |

2015-03-31 | MethComp | Functions for Analysis of Agreement in Method Comparison Studies |

2015-03-31 | mgcv | Mixed GAM Computation Vehicle with GCV/AIC/REML Smoothness Estimation |

2015-03-31 | MIICD | Data Augmentation and Multiple Imputation for Interval Censored Data |

2015-03-31 | orthogonalsplinebasis | Orthogonal B-Spline Basis Functions |

2015-03-31 | questionr | Functions to Make Surveys Processing Easier |

2015-03-31 | RLumShiny | 'Shiny' Applications for the R Package 'Luminescence' |

2015-03-31 | Rmonkey | A Survey Monkey R Client |

2015-03-31 | shinyBS | Twitter Bootstrap Components for Shiny |

2015-03-30 | Ake | Associated Kernel Estimations |

2015-03-30 | ConSpline | Partial Linear Least-Squares Regression using Constrained Splines |

2015-03-30 | ecoengine | Programmatic Interface to the API Serving UC Berkeley's Natural History Data |

2015-03-30 | FeatureHashing | Creates a Model Matrix via Feature Hashing with a Formula Interface |

2015-03-30 | ftsa | Functional Time Series Analysis |

2015-03-30 | glinternet | Learning Interactions via Hierarchical Group-Lasso Regularization |

2015-03-30 | lattice | Lattice Graphics |

2015-03-30 | mipfp | Multidimensional Iterative Proportional Fitting and Alternative Models |

2015-03-30 | MKmisc | Miscellaneous Functions from M. Kohl |

2015-03-30 | qmethod | Analysis of Subjective Perspectives Using Q Methodology |

2015-03-30 | RIGHT | R Interactive Graphics via HTML |

2015-03-30 | sadists | Some Additional Distributions |

2015-03-30 | sae | Small Area Estimation |

2015-03-30 | servr | A Simple HTTP Server to Serve Static Files or Dynamic Documents |

2015-03-30 | statmod | Statistical Modeling |

2015-03-30 | TFDEA | Technology Forecasting using DEA (Data Envelopment Analysis) |

2015-03-30 | VdgRsm | Plots of Scaled Prediction Variances for Response Surface Designs |

2015-03-29 | adehabitatLT | Analysis of Animal Movements |

2015-03-29 | DoE.base | Full Factorials, Orthogonal Arrays and Base Utilities for DoE Packages |

2015-03-29 | empiricalFDR.DESeq2 | Simulation-Based False Discovery Rate in RNA-Seq |

2015-03-29 | flowr | Streamlining Design and Deployment of Complex Workflows |

2015-03-29 | ggRandomForests | Visually Exploring Random Forests |

2015-03-29 | mime | Map Filenames to MIME Types |

2015-03-29 | mirt | Multidimensional Item Response Theory |

2015-03-29 | MonetDB.R | Connect MonetDB to R |

2015-03-29 | pscl | Political Science Computational Laboratory, Stanford University |

2015-03-29 | Rd2roxygen | Convert Rd to Roxygen Documentation |

2015-03-29 | snht | Standard Normal Homogeneity Test |

2015-03-28 | Exact | Unconditional Exact Test |

2015-03-28 | SOMbrero | SOM Bound to Realize Euclidean and Relational Outputs |

2015-03-28 | spgs | Statistical Patterns in Genomic Sequences |

2015-03-28 | WGCNA | Weighted Correlation Network Analysis |

2015-03-27 | adehabitat | Analysis of Habitat Selection by Animals |

2015-03-27 | adehabitatHR | Home Range Estimation |

2015-03-27 | adehabitatHS | Analysis of Habitat Selection by Animals |

2015-03-27 | adehabitatMA | Tools to Deal with Raster Maps |

2015-03-27 | AutoSEARCH | General-to-Specific (GETS) Modelling |

2015-03-27 | ELYP | Empirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model |

2015-03-27 | eurostat | Tools for Eurostat Open Data |

2015-03-27 | fanc | Penalized Likelihood Factor Analysis via Nonconvex Penalty |

2015-03-27 | gdm | Functions for Generalized Dissimilarity Modeling |

2015-03-27 | ggExtra | Collection of Functions and Layers to Enhance ggplot2 |

2015-03-27 | HiClimR | Hierarchical Climate Regionalization |

2015-03-27 | HiDimDA | High Dimensional Discriminant Analysis |

2015-03-27 | LPStimeSeries | Learned Pattern Similarity and Representation for Time Series |

2015-03-27 | miniCRAN | Create a Mini Version of CRAN Containing Only Selected Packages |

2015-03-27 | PAFit | Nonparametric Estimation of Preferential Attachment and Node Fitness in Temporal Complex Networks |

2015-03-27 | rDEA | Robust Data Envelopment Analysis (DEA) for R |

2015-03-27 | reval | Repeated Function Evaluation for Sensitivity Analysis |

2015-03-27 | s20x | Functions for University of Auckland Course STATS 201/208 Data Analysis |

2015-03-27 | SAMUR | Stochastic Augmentation of Matched Data Using Restriction Methods |

2015-03-27 | secrdesign | Sampling Design for Spatially Explicit Capture-Recapture |

2015-03-27 | StatMeasures | Easy Data Manipulation, Data Quality and Statistical Checks |

2015-03-27 | tmap | Thematic Maps |

2015-03-27 | tm.plugin.europresse | Import Articles from 'Europresse' Using the 'tm' Text Mining Framework |

2015-03-27 | UNF | Tools for Creating Universal Numeric Fingerprints for Data |

2015-03-26 | chopthin | The Chopthin Resampler |

2015-03-26 | Crossover | Analysis and Search of Crossover Designs |

2015-03-26 | descomponer | Seasonal Adjustment by Frequency Analysis |

2015-03-26 | interpretR | Binary Classifier Interpretation Functions |

2015-03-26 | KappaGUI | GUI for Cohen's and Fleiss' Kappa |

2015-03-26 | kmodR | K-Means with Simultaneous Outlier Detection |

2015-03-26 | MazamaSpatialUtils | Mazama Science Spatial Data Download and Utility Functions |

2015-03-26 | nodiv | Compares the Distribution of Sister Clades Through a Phylogeny |

2015-03-26 | quantspec | Quantile-Based Spectral Analysis of Time Series |

2015-03-26 | repmis | Miscellaneous Tools for Reproducible Research |

2015-03-26 | ROCR | Visualizing the Performance of Scoring Classifiers |

2015-03-26 | rr | Statistical Methods for the Randomized Response Technique |

2015-03-26 | sandwich | Robust Covariance Matrix Estimators |

2015-03-26 | shinyFiles | A Server-Side File System Viewer For Shiny |

2015-03-26 | Surrogate | Evaluation of Surrogate Endpoints in Clinical Trials |

2015-03-26 | survsim | Simulation of Simple and Complex Survival Data |

2015-03-25 | BayesGESM | Bayesian Analysis of Generalized Elliptical Semi-Parametric Models and Flexible Measurement Error Models |

2015-03-25 | diseasemapping | Modelling Spatial Variation in Disease Risk for Areal Data |

2015-03-25 | fitbitScraper | Scrapes Data from Fitbit.com |

2015-03-25 | flexCWM | Flexible Cluster-Weighted Modeling |

2015-03-25 | glmgraph | Graph-Constrained Regularization for Sparse Generalized Linear Models |

2015-03-25 | internetarchive | An API Client for the Internet Archive |

2015-03-25 | investr | Inverse Estimation/Calibration Functions |

2015-03-25 | kohonen | Supervised and Unsupervised Self-Organising Maps |

2015-03-25 | mapmisc | Utilities for Producing Maps |

2015-03-25 | pheno2geno | High-Throughput Generation of Genetic Markers and Maps from Molecular Phenotypes for Crosses Between Inbred Strains |

2015-03-25 | radiant | Business Analytics using R and Shiny |

2015-03-25 | secr | Spatially Explicit Capture-Recapture |

2015-03-25 | sn | The Skew-Normal and Skew-t Distributions |

2015-03-25 | timeROC | Time-Dependent ROC Curve and AUC for Censored Survival Data |

2015-03-25 | tumblR | Access to Tumblr v2 API |

2015-03-25 | vines | Multivariate Dependence Modeling with Vines |

2015-03-24 | assertive | Readable Check Functions to Ensure Code Integrity |

2015-03-24 | assertr | Assertive Programming for R Analysis Pipelines |

2015-03-24 | FAwR | Functions and Datasets for "Forest Analytics with R" |

2015-03-24 | fishmove | Prediction of Fish Movement Parameters |

2015-03-24 | goft | Tests of Fit for some Probability Distributions |

2015-03-24 | jomo | Multilevel Joint Modelling Multiple Imputation |

2015-03-24 | mapfit | A Tool for PH/MAP Parameter Estimation |

2015-03-24 | rcbalance | Large, Sparse Optimal Matching with Refined Covariate Balance |

2015-03-24 | RDS | Respondent-Driven Sampling |

2015-03-24 | readstata13 | Import Stata 13 Data Files |

2015-03-24 | rgexf | Build, Import and Export GEXF Graph Files |

2015-03-24 | RoughSets | Data Analysis Using Rough Set and Fuzzy Rough Set Theories |

2015-03-24 | rscala | Bi-Directional Interface Between R and Scala with Callbacks |

2015-03-24 | rtable | Tabular Reporting Functions |

2015-03-24 | tree | Classification and Regression Trees |

2015-03-24 | trend | Non-Parametric Trend Tests and Change-Point Detection |

2015-03-23 | BAMMtools | Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees |

2015-03-23 | bootsPLS | Bootstrap Subsamplings of Sparse Partial Least Squares - Discriminant Analysis for Classification and Signature Identification |

2015-03-23 | Copula.Markov | Estimation and Statistical Process Control Under Copula-Based Time Series Models |

2015-03-23 | measuRing | Detection and Control of Tree-Ring Widths on Scanned Image Sections |

2015-03-23 | mht | Multiple Hypothesis Testing for Variable Selection in High-Dimensional Linear Models |

2015-03-23 | NPBayesImpute | Non-Parametric Bayesian Multiple Imputation for Categorical Data |

2015-03-23 | OutbreakTools | Basic Tools for the Analysis of Disease Outbreaks |

2015-03-23 | PMCMR | Calculate Pairwise Multiple Comparisons of Mean Rank Sums |

2015-03-23 | RSA | Response Surface Analysis |

2015-03-23 | rTableICC | Random Generation of Contingency Tables |

2015-03-23 | waffle | Create Waffle Chart Visualizations in R |

2015-03-22 | Coxnet | Regularized Cox Model |

2015-03-22 | latentnet | Latent Position and Cluster Models for Statistical Networks |

2015-03-22 | MCS | Model Confidence Set Procedure |

2015-03-22 | MPTinR | Analyze Multinomial Processing Tree Models |

2015-03-22 | mvMORPH | Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data |

2015-03-22 | psd | Adaptive, Sine-Multitaper Power Spectral Density Estimation |

2015-03-22 | TR8 | A Tool for Downloading Functional Traits Data for Plant Species |

2015-03-21 | DescTools | Tools for Descriptive Statistics |

2015-03-21 | lambda.tools | Tools for Modeling Data with Functional Programming |

2015-03-21 | MASS | Support Functions and Datasets for Venables and Ripley's MASS |

2015-03-21 | mRMRe | R package for parallelized mRMR ensemble feature selection |

2015-03-21 | sda | Shrinkage Discriminant Analysis and CAT Score Variable Selection |

2015-03-21 | st | Shrinkage t Statistic and Correlation-Adjusted t-Score |

2015-03-21 | tcR | Advanced Data Analysis of T-Cell Receptor Repertoires |

2015-03-20 | alphahull | Generalization of the Convex Hull of a Sample of Points in the Plane |

2015-03-20 | astrochron | A Computational Tool for Astrochronology |

2015-03-20 | BayesFactor | Computation of Bayes Factors for Common Designs |

2015-03-20 | checkmate | Fast and Versatile Argument Checks |

2015-03-20 | circlize | Circular Visualization in R |

2015-03-20 | DDD | Diversity-Dependent Diversification |

2015-03-20 | directPA | Direction Analysis for Pathways and Kinases |

2015-03-20 | flora | Tools for Interacting with the Brazilian Flora Checklist |

2015-03-20 | GAR | Authorize and Request Google Analytics Data |

2015-03-20 | glmm | Generalized Linear Mixed Models via Monte Carlo Likelihood Approximation |

2015-03-20 | hermite | Generalized Hermite Distribution |

2015-03-20 | hierDiversity | Hierarchical Multiplicative Partitioning of Complex Phenotypes |

2015-03-20 | james.analysis | Analysis Tools for the 'JAMES' Framework |

2015-03-20 | lambda.r | Modeling Data with Functional Programming |

2015-03-20 | LMest | Latent Markov Models with and without Covariates |

2015-03-20 | NanoStringNorm | Normalize NanoString miRNA and mRNA Data |

2015-03-20 | pcnetmeta | Methods for Patient-Centered Network Meta-Analysis |

2015-03-20 | PopED | Population (and Individual) Optimal Experimental Design |

2015-03-20 | prais | Prais-Winsten Estimation Procedure for AR(1) Serial Correlation |

2015-03-20 | randomizr | Easy to Use Tools for Common Forms of Random Assignment |

2015-03-20 | rPref | Database Preferences and Skyline Computation |

2015-03-20 | SAVE | Bayesian Emulation, Calibration and Validation of Computer Models |

2015-03-20 | simecol | Simulation of Ecological (and Other) Dynamic Systems |

2015-03-20 | systemicrisk | A Toolbox for Systemic Risk |

2015-03-19 | biclust | BiCluster Algorithms |

2015-03-19 | bisoreg | Bayesian Isotonic Regression with Bernstein Polynomials |

2015-03-19 | DiagrammeR | Create Diagrams and Flowcharts Using R |

2015-03-19 | eco | Ecological Inference in 2x2 Tables |

2015-03-19 | ensembleBMA | Probabilistic Forecasting using Ensembles and Bayesian Model Averaging |

2015-03-19 | Interatrix | Compute Chi-Square Measures with Corrections |

2015-03-19 | lessR | Less Code, More Results |

2015-03-19 | mcmcplots | Create Plots from MCMC Output |

2015-03-19 | move | Visualizing and Analyzing Animal Track Data |

2015-03-19 | NSM3 | Functions and Datasets to Accompany Hollander, Wolfe, and Chicken - Nonparametric Statistical Methods, Third Edition |

2015-03-19 | pcalg | Methods for Graphical Models and Causal Inference |

2015-03-19 | phylocurve | Phylogenetic Comparative Methods for Function-Valued and Other High-Dimensional Traits |

2015-03-19 | pipe.design | Dual-Agent Dose Escalation for Phase I Trials using the PIPE Design |

2015-03-19 | rdrobust | Robust Data-Driven Statistical Inference in Regression-Discontinuity Designs |

2015-03-19 | rkt | Mann-Kendall Test, Seasonal and Regional Kendall Tests |

2015-03-19 | treeClust | Cluster Distances Through Trees |

2015-03-19 | VarSelLCM | Variable Selection for Model-Based Clustering using the Integrated Complete-Data Likelihood of a Latent Class Model |

2015-03-18 | BatchExperiments | Statistical Experiments on Batch Computing Clusters |

2015-03-18 | BatchJobs | Batch Computing with R |

2015-03-18 | CARLIT | Ecological Quality Ratios Calculation and Plot |

2015-03-18 | decode | Differential Co-Expression and Differential Expression Analysis |

2015-03-18 | fftwtools | Wrapper for FFTW3: Includes 1-D, Univariate and Multivariate, and 2-D Transform |

2015-03-18 | FuzzyStatProb | Fuzzy Stationary Probabilities from a Sequence of Observations of an Unknown Markov Chain |

2015-03-18 | jtrans | Johnson Transformation for Normality |

2015-03-18 | MVN | Multivariate Normality Tests |

2015-03-18 | ncvreg | Regularization Paths for SCAD and MCP Penalized Regression Models |

2015-03-18 | PerFit | Person Fit |

2015-03-18 | robumeta | Robust Variance Meta-Regression |

2015-03-18 | saccades | Detection of Fixations in Eye-Tracking Data |

2015-03-18 | splancs | Spatial and Space-Time Point Pattern Analysis |

2015-03-17 | atsd | Support Querying Axibase Time-Series Database |

2015-03-17 | BGPhazard | Markov Beta and Gamma Processes for Modeling Hazard Rates |

2015-03-17 | bigsplines | Smoothing Splines for Large Samples |

2015-03-17 | checkpoint | Install Packages from Snapshots on the Checkpoint Server for Reproducibility |

2015-03-17 | ClustVarLV | Clustering of Variables Around Latent Variables |

2015-03-17 | conting | Bayesian Analysis of Contingency Tables |

2015-03-17 | DCluster | Functions for the Detection of Spatial Clusters of Diseases |

2015-03-17 | EntropyExplorer | Tools for Exploring Differential Shannon Entropy, Differential Coefficient of Variation and Differential Expression |

2015-03-17 | gapminder | Gapminder Data |

2015-03-17 | ggplot2 | An Implementation of the Grammar of Graphics |

2015-03-17 | gmm | Generalized Method of Moments and Generalized Empirical Likelihood |

2015-03-17 | HistDAWass | Histogram-Valued Data Analysis |

2015-03-17 | histmdl | A Most Informative Histogram-Like Model |

2015-03-17 | kfigr | Integrated Code Chunk Anchoring and Referencing for R Markdown Documents |

2015-03-17 | marked | Mark-Recapture Analysis for Survival and Abundance Estimation |

2015-03-17 | mixexp | Design and Analysis of Mixture Experiments |

2015-03-17 | RGA | A Google Analytics API Client |

2015-03-17 | rglobi | R Interface to Global Biotic Interactions |

2015-03-17 | rsatscan | Tools, Classes, and Methods for Interfacing with SaTScan Stand-Alone Software |

2015-03-17 | spdep | Spatial Dependence: Weighting Schemes, Statistics and Models |

2015-03-17 | staTools | Statistical Tools for Social Network Analysis |

2015-03-17 | tsallisqexp | Tsallis q-Exp Distribution |

2015-03-17 | vcrpart | Tree-Based Varying Coefficient Regression for Generalized Linear and Ordinal Mixed Models |

2015-03-17 | VGAMdata | Data Supporting the 'VGAM' Package |

2015-03-16 | ChemoSpec | Exploratory Chemometrics for Spectroscopy |

2015-03-16 | choroplethr | Simplify the Creation of Choropleth Maps in R |

2015-03-16 | genalg | R Based Genetic Algorithm |

2015-03-16 | gvcm.cat | Regularized Categorical Effects/Categorical Effect Modifiers/Continuous/Smooth Effects in GLMs |

2015-03-16 | plotROC | Generate Useful ROC Curve Charts for Print and Interactive Use |

2015-03-16 | PRISMA | Protocol Inspection and State Machine Analysis |

2015-03-16 | ROCS | Receiver Operating Characteristics Surface |

2015-03-16 | SIS | Sure Independence Screening |

2015-03-16 | survRM2 | Comparing Restricted Mean Survival Time |

2015-03-16 | zoo | S3 Infrastructure for Regular and Irregular Time Series (Z's Ordered Observations) |

2015-03-15 | dismo | Species Distribution Modeling |

2015-03-15 | jmetrik | Tools for Interacting with 'jMetrik' |

2015-03-15 | metaMix | Bayesian Mixture Analysis for Metagenomic Community Profiling |

2015-03-15 | NHPoisson | Modelling and Validation of Non Homogeneous Poisson Processes |

2015-03-15 | rgdal | Bindings for the Geospatial Data Abstraction Library |

2015-03-15 | RMark | R Code for Mark Analysis |

2015-03-15 | rqPen | Penalized Quantile Regression |

2015-03-15 | separationplot | Separation Plots |

2015-03-15 | tab | Functions for Creating Summary Tables for Statistical Reports |

2015-03-15 | TDboost | A Boosted Tweedie Compound Poisson Model |

2015-03-15 | TSP | Traveling Salesperson Problem (TSP) |

2015-03-14 | clusterSim | Searching for Optimal Clustering Procedure for a Data Set |

2015-03-14 | dmm | Dyadic Mixed Model for Pedigree Data |

2015-03-14 | gstat | Spatial and Spatio-Temporal Geostatistical Modelling, Prediction and Simulation |

2015-03-14 | numbers | Number-Theoretic Functions |

2015-03-14 | pointRes | Analyzing Pointer Years and Components of Resilience |

2015-03-14 | redcapAPI | R Interface to REDCap |

2015-03-14 | RVAideMemoire | Diverse Basic Statistical and Graphical Functions |

2015-03-14 | scriptests | Transcript-Based Unit Tests that are Easy to Create and Maintain |

2015-03-14 | sgPLS | Sparse Group Partial Least Square Methods |

2015-03-14 | symbolicDA | Analysis of Symbolic Data |

2015-03-13 | abind | Combine Multidimensional Arrays |

2015-03-13 | alm | R Client for the Lagotto Altmetrics Platform |

2015-03-13 | betas | Standardized Beta Coefficients |

2015-03-13 | bizdays | Business Days Calculations and Utilities |

2015-03-13 | boottol | Bootstrap Tolerance Levels for Credit Scoring Validation Statistics |

2015-03-13 | climdex.pcic | PCIC Implementation of Climdex Routines |

2015-03-13 | FAmle | Maximum Likelihood and Bayesian Estimation of Univariate Probability Distributions |

2015-03-13 | funFEM | Clustering in the Discriminative Functional Subspace |

2015-03-13 | Holidays | Holiday and Half-Day Data, for Use with the 'TimeWarp' Package |

2015-03-13 | JMbayes | Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach |

2015-03-13 | netassoc | Inference of Species Associations from Co-Occurrence Data |

2015-03-13 | PReMiuM | Dirichlet Process Bayesian Clustering, Profile Regression |

2015-03-12 | bayesLife | Bayesian Projection of Life Expectancy |

2015-03-12 | cardidates | Identification of Cardinal Dates in Ecological Time Series |

2015-03-12 | CFC | Cause-Specific Framework for Competing-Risk Analysis |

2015-03-12 | FAdist | Distributions that are Sometimes Used in Hydrology |

2015-03-12 | fdakma | Functional Data Analysis: K-Mean Alignment |

2015-03-12 | G2Sd | Grain-Size Statistics and Description of Sediment |

2015-03-12 | ggvis | Interactive Grammar of Graphics |

2015-03-12 | graphicalVAR | Graphical VAR for Experience Sampling Data |

2015-03-12 | GWAF | Genome-Wide Association/Interaction Analysis and Rare Variant Analysis with Family Data |

2015-03-12 | hypervolume | High-Dimensional Kernel Density Estimation and Geometry Operations |

2015-03-12 | likeLTD | Tools to Determine DNA Profile Evidence |

2015-03-12 | LLSR | Data Analysis of Liquid-Liquid Systems |

2015-03-12 | lsbclust | Least-Squares Bilinear Clustering for Three-Way Data |

2015-03-12 | nparcomp | Multiple Comparisons and Simultaneous Confidence Intervals |

2015-03-12 | qualV | Qualitative Validation Methods |

2015-03-12 | RcmdrPlugin.NMBU | R Commander Plug-in for University Level Applied Statistics |

2015-03-12 | toOrdinal | Function for Converting Cardinal to Ordinal Numbers by Adding a Language Specific Ordinal Indicator to the Number |

2015-03-11 | baseline | Baseline Correction of Spectra |

2015-03-11 | blatr | Send Emails Using 'Blat' for Windows |

2015-03-11 | clusterSEs | Calculate Cluster-Robust p-Values and Confidence Intervals |

2015-03-11 | colorspace | Color Space Manipulation |

2015-03-11 | dbmss | Distance-Based Measures of Spatial Structures |

2015-03-11 | gbm | Generalized Boosted Regression Models |

2015-03-11 | gdistance | Distances and Routes on Geographical Grids |

2015-03-11 | gems | Generalized Multistate Simulation Model |

2015-03-11 | ipdw | Spatial Interpolation by Inverse Path Distance Weighting |

2015-03-11 | MCL | Markov Cluster Algorithm |

2015-03-11 | mixlm | Mixed Model ANOVA and Statistics for Education |

2015-03-11 | multgee | GEE Solver for Correlated Nominal or Ordinal Multinomial Responses |

2015-03-11 | multigroup | Multigroup Data Analysis |

2015-03-11 | nlsem | Fitting Structural Equation Mixture Models |

2015-03-11 | NORRRM | Geochemical Toolkit for R |

2015-03-11 | rgrass7 | Interface Between GRASS 7 Geographical Information System and R |

2015-03-11 | rtkpp | STK++ Integration to R Using Rcpp |

2015-03-11 | seismicRoll | Fast Rolling Functions for Seismology using Rcpp |

2015-03-11 | showtext | Using Fonts More Easily in R Graphs |

2015-03-11 | summarytools | Dataframe Summaries, Frequency Tables and Numerical Summaries with Customizable Output |

2015-03-11 | texmexseq | Treatment Effect eXplorer for Microbial Ecology eXperiments (using Sequence Counts) |

2015-03-10 | bartMachine | Bayesian Additive Regression Trees |

2015-03-10 | binr | Cut Numeric Values into Evenly Distributed Groups |

2015-03-10 | cit | Causal Inference Test |

2015-03-10 | codetools | Code Analysis Tools for R |

2015-03-10 | DiceOptim | Kriging-Based Optimization for Computer Experiments |

2015-03-10 | EIAdata | R Wrapper for the Energy Information Administration (EIA) API |

2015-03-10 | EnvStats | Package for Environmental Statistics, Including US EPA Guidance |

2015-03-10 | eVenn | A Powerful Tool to Quickly Compare Huge Lists and Draw Venn Diagrams |

2015-03-10 | forestplot | Advanced Forest Plot Using 'grid' Graphics |

2015-03-10 | gsheet | Download Google Sheets Using Just the URL |

2015-03-10 | lmfor | Functions for Forest Biometrics |

2015-03-10 | longitudinal | Analysis of Multiple Time Course Data |

2015-03-10 | midasr | Mixed Data Sampling Regression |

2015-03-10 | mixture | Mixture Models for Clustering and Classification |

2015-03-10 | orca | Computation of Graphlet Orbit Counts in Sparse Graphs |

2015-03-10 | pheatmap | Pretty Heatmaps |

2015-03-10 | qgraph | Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation |

2015-03-10 | relevent | Relational Event Models |

2015-03-10 | RVFam | Rare Variants Association Analyses with Family Data |

2015-03-10 | showtextdb | Font Files for the 'showtext' Package |

2015-03-10 | vmsbase | GUI Tools to Process, Analyze and Plot Fisheries Data |

2015-03-09 | C50 | C5.0 Decision Trees and Rule-Based Models |

2015-03-09 | care | High-Dimensional Regression and CAR Score Variable Selection |

2015-03-09 | cOde | Automated C Code Generation for Use with the "deSolve" and "bvpSolve"" Packages |

2015-03-09 | deldir | Delaunay Triangulation and Dirichlet (Voronoi) Tessellation |

2015-03-09 | desirability | Desirability Function Optimization and Ranking |

2015-03-09 | DynNom | A Dynamic Nomogram for Linear and Generalized Linear Models as Shiny Applications |

2015-03-09 | Familias | Probabilities for Pedigrees Given DNA Data |

2015-03-09 | fdrtool | Estimation of (Local) False Discovery Rates and Higher Criticism |

2015-03-09 | GetoptLong | Parsing Command-Line Arguments and Variable Interpolation |

2015-03-09 | HSAUR3 | A Handbook of Statistical Analyses Using R (3rd Edition) |

2015-03-09 | inferference | Methods for Causal Inference with Interference |

2015-03-09 | informR | Sequence Statistics for Relational Event Models |

2015-03-09 | OUwie | Analysis of Evolutionary Rates in an OU Framework |

2015-03-09 | pollstR | Client for the HuffPost Pollster API |

2015-03-09 | rgbif | Interface to the Global Biodiversity Information Facility API |

2015-03-09 | SensusR | Sensus Analytics |

2015-03-09 | SGCS | Spatial Graph Based Clustering Summaries for Spatial Point Patterns |

2015-03-08 | blocksdesign | Nested Block Designs for Unstructured Treatments |

2015-03-08 | csvread | Fast Specialized CSV File Loader |

2015-03-08 | FeaLect | Scores Features for Feature Selection |

2015-03-08 | GameTheory | Cooperative Game Theory |

2015-03-08 | hergm | Hierarchical Exponential-Family Random Graph Models |

2015-03-08 | ibmdbR | IBM in-Database Analytics for R |

2015-03-08 | mbbefd | Maxwell Bolzano Bose Einstein Fermi Dirac Distribution and Exposure Curve |

2015-03-08 | memisc | Tools for Management of Survey Data, Graphics, Programming, Statistics, and Simulation |

2015-03-08 | netgsa | Network-Based Gene Set Analysis |

2015-03-08 | quantmod | Quantitative Financial Modelling Framework |

2015-03-08 | signal.hsmm | Predict Presence of Signal Peptides |

2015-03-07 | ks | Kernel Smoothing |

2015-03-07 | openxlsx | Read, Write and Edit XLSX Files |

2015-03-07 | SID | Structural Intervention Distance |

2015-03-07 | SimSeq | Nonparametric Simulation of RNA-Seq Data |

2015-03-07 | tm.plugin.lexisnexis | Import Articles from LexisNexis Using the tm Text Mining Framework |

2015-03-07 | yhatr | R Binder for the Yhat API |

2015-03-06 | alabama | Constrained Nonlinear Optimization |

2015-03-06 | biogas | Analyze Biogas Data and Predict Biogas Production |

2015-03-06 | climwin | Climate Window Analysis |

2015-03-06 | depend.truncation | Statistical Inference for Parametric and Semiparametric Models Based on Dependently Truncated Data |

2015-03-06 | ecospat | Spatial Ecology Miscellaneous Methods |

2015-03-06 | frailtypack | General Frailty Models: Shared, Joint and Nested Frailty Models with Prediction |

2015-03-06 | httk | High-Throughput Toxicokinetics |

2015-03-06 | qtl | Tools for Analyzing QTL Experiments |

2015-03-06 | Rcpp | Seamless R and C++ Integration |

2015-03-06 | recluster | Ordination Methods for the Analysis of Beta-Diversity Indices |

2015-03-06 | ReporteRs | Microsoft Word, Microsoft Powerpoint and HTML Documents Generation |

2015-03-06 | RESS | Integrates R and Essentia |

2015-03-06 | SDDE | Shortcuts, Detours and Dead Ends (SDDE) Path Types in Genome Similarity Networks |

2015-03-06 | sensitivity | Sensitivity Analysis |

2015-03-06 | vardpoor | Variance Estimation for Sample Surveys by the Ultimate Cluster Method |

2015-03-06 | VGAM | Vector Generalized Linear and Additive Models |

2015-03-06 | webchem | Chemical Information from the Web |

2015-03-05 | Binarize | Binarization of One-Dimensional Data |

2015-03-05 | binda | Multi-Class Discriminant Analysis using Binary Predictors |

2015-03-05 | CAM | Causal Additive Model (CAM) |

2015-03-05 | copula | Multivariate Dependence with Copulas |

2015-03-05 | DAMOCLES | Dynamic Assembly Model of Colonization, Local Extinction and Speciation |

2015-03-05 | ggmap | Spatial Visualization with Google Maps and OpenStreetMap |

2015-03-05 | GLDreg | Fit GLD Regression Model and GLD Quantile Regression Model to Empirical Data |

2015-03-05 | gtop | Game-Theoretically OPtimal (GTOP) Reconciliation Method |

2015-03-05 | hyperSpec | Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...) |

2015-03-05 | KOGMWU | Functional Summary and Meta-Analysis of Gene Expression Data |

2015-03-05 | MicSim | Performing Continuous-Time Microsimulation |

2015-03-05 | multcomp | Simultaneous Inference in General Parametric Models |

2015-03-05 | pegas | Population and Evolutionary Genetics Analysis System |

2015-03-05 | timereg | Flexible Regression Models for Survival Data |

2015-03-04 | abf2 | Load Gap-Free Axon ABF2 Files |

2015-03-04 | bootnet | Bootstrap Methods for Various Network Estimation Routines |

2015-03-04 | capm | Companion Animal Population Management |

2015-03-04 | ChainLadder | Statistical Methods and Models for Claims Reserving in General Insurance |

2015-03-04 | clifro | Easily Download and Visualise Climate Data from CliFlo |

2015-03-04 | FunChisq | Chi-Square Tests for Non-Parametric Functional Dependencies |

2015-03-04 | geocodeHERE | Wrapper for Nokia's HERE Geocoding API |

2015-03-04 | Gmisc | Descriptive Statistics, Transition Plots, and More |

2015-03-04 | krm | Kernel Based Regression Models |

2015-03-04 | kyotil | Utility Functions by Youyi, Krisz and Others |

2015-03-04 | MixGHD | Model Based Clustering, Classification and Discriminant Analysis Using the Mixture of Generalized Hyperbolic Distributions |

2015-03-04 | monreg | Nonparametric Monotone Regression |

2015-03-04 | nCal | Nonlinear Calibration |

2015-03-04 | ncappc | NCA Calculation and Population PK Model Diagnosis |

2015-03-04 | networkD3 | Tools for Creating D3 JavaScript Network Graphs from R |

2015-03-04 | Newdistns | Computes Pdf, Cdf, Quantile and Random Numbers, Measures of Inference for 19 General Families of Distributions |

2015-03-04 | OceanView | Visualisation of Oceanographic Data and Model Output |

2015-03-04 | planor | Generation of Regular Factorial Designs |

2015-03-04 | PResiduals | Probability-Scale Residuals and Residual Correlations |

2015-03-04 | pxweb | R Interface to the PX-Web/PC-Axis API |

2015-03-04 | randomForestSRC | Random Forests for Survival, Regression and Classification (RF-SRC) |

2015-03-04 | rclinicaltrials | Download Aggregate Trial Information and Results from ClinicalTrials.gov |

2015-03-04 | Rcolombos | Interface to Colombos Compendia using the Exposed REST API |

2015-03-04 | rcrossref | Client for Various CrossRef APIs |

2015-03-04 | RISmed | Download Content from NCBI Databases |

2015-03-04 | rNOMADS | An Interface to the NOAA Operational Model Archive and Distribution System |

2015-03-04 | simctest | Safe Implementation of Monte Carlo Tests |

2015-03-04 | stepR | Fitting Step-Functions |

2015-03-03 | agridat | Agricultural Datasets |

2015-03-03 | BayesSummaryStatLM | MCMC Sampling of Bayesian Linear Models via Summary Statistics |

2015-03-03 | bio3d | Biological Structure Analysis |

2015-03-03 | BiSEp | Toolkit to Identify Candidate Synthetic Lethality |

2015-03-03 | BOG | Bacterium and Virus Analysis of Orthologous Groups (BOG) is a Package for Identifying Differentially Regulated Genes in the Light of Gene Functions |

2015-03-03 | car | Companion to Applied Regression |

2015-03-03 | coalescentMCMC | MCMC Algorithms for the Coalescent |

2015-03-03 | coda | Output Analysis and Diagnostics for MCMC |

2015-03-03 | coxme | Mixed Effects Cox Models |

2015-03-03 | FieldSim | Random Fields (and Bridges) Simulations |

2015-03-03 | hornpa | Horn's (1965) Test to Determine the Number of Components/Factors |

2015-03-03 | JAGUAR | Joint Analysis of Genotype and Group-Specific Variability Using a Novel Score Test Approach to Map eQTL |

2015-03-03 | LPTime | LP Nonparametric Approach to Non-Gaussian Non-Linear Time Series Modelling |

2015-03-03 | mediation | Causal Mediation Analysis |

2015-03-03 | NAPPA | Performs the Processing and Normalisation of Nanostring miRNA and mRNA Data |

2015-03-03 | NSUM | Network Scale Up Method |

2015-03-03 | pRF | Permutation Significance for Random Forests |

2015-03-03 | RcmdrPlugin.EACSPIR | Plugin de R-Commander para el Manual 'EACSPIR' |

2015-03-03 | rentrez | Entrez in R |

2015-03-03 | rsnps | Get SNP (Single-Nucleotide Polymorphism) Data on the Web |

2015-03-03 | Rssa | A Collection of Methods for Singular Spectrum Analysis |

2015-03-03 | shinythemes | Themes for Shiny |

2015-03-03 | simMSM | Simulation of Event Histories for Multi-State Models |

2015-03-03 | sirt | Supplementary Item Response Theory Models |

2015-03-03 | stheoreme | Klimontovich's S-Theorem Algorithm Implementation and Data Preparation Tools |

2015-03-03 | x.ent | eXtraction of ENTity |

2015-03-02 | archivist | Tools for Storing, Restoring and Searching for R Objects |

2015-03-02 | ggenealogy | Visualization Tools for Genealogical Data |

2015-03-02 | ggthemes | Extra Themes, Scales and Geoms for 'ggplot2' |

2015-03-02 | IsingSampler | Sampling Methods and Distribution Functions for the Ising Model |

2015-03-02 | lsr | Companion to "Learning Statistics with R" |

2015-03-02 | PogromcyDanych | PogromcyDanych / DataCrunchers is the Masive Online Open Course that Brings R and Statistics to the People |

2015-03-02 | ppiPre | Predict Protein-Protein Interactions Based on Functional and Topological Similarities |

2015-03-02 | RobPer | Robust Periodogram and Periodicity Detection Methods |

2015-03-02 | stmCorrViz | A Tool for Structural Topic Model Visualizations |

2015-03-02 | strum | STRUctural Modeling of Latent Variables for General Pedigree |

2015-03-01 | BinNonNor | Data Generation with Binary and Continuous Non-Normal Components |

2015-03-01 | Conake | Continuous Associated Kernel Estimation |

2015-03-01 | emIRT | EM Algorithms for Estimating Item Response Theory Models |

2015-03-01 | FinCovRegularization | Covariance Matrix Estimation and Regularization for Finance |

2015-03-01 | gendata | Generate and Modify Synthetic Datasets |

2015-03-01 | isingLenzMC | Monte Carlo for Classical Ising Model |

2015-03-01 | PoisBinNonNor | Data Generation with Poisson, Binary and Continuous Components |

2015-03-01 | PoisBinOrd | Data Generation with Poisson, Binary and Ordinal Components |

2015-03-01 | R.utils | Various Programming Utilities |

2015-03-01 | XLConnect | Excel Connector for R |

2015-02-28 | ExtremeBounds | Extreme Bounds Analysis (EBA) |

2015-02-28 | fields | Tools for Spatial Data |

2015-02-28 | joint.Cox | Penalized Likelihood Estimation under the Joint Cox Models Between TTP and OS for Meta-Analysis |

2015-02-28 | laketemps | Lake Temperatures Collected by Situ and Satellite Methods from 1985-2009 |

2015-02-28 | MAMS | Designing Multi-Arm Multi-Stage Studies |

2015-02-28 | pwr | Basic Functions for Power Analysis |

2015-02-28 | R.oo | R Object-Oriented Programming with or without References |

2015-02-28 | sidier | Substitution and Indel Distances to Infer Evolutionary Relationships |

2015-02-28 | timma | Target Inhibition Interaction using Maximization and Minimization Averaging |

2015-02-28 | wkb | Convert Between Spatial Objects and Well-Known Binary (WKB) Geometry |

2015-02-27 | CoxRidge | Cox Models with Dynamic Ridge Penalties |

2015-02-27 | DSsim | Distance Sampling Simulations |

2015-02-27 | FindIt | Finding Heterogeneous Treatment Effects |

2015-02-27 | GenForImp | The Forward Imputation: A Sequential Distance-Based Approach for Imputing Missing Data |

2015-02-27 | geostatsp | Geostatistical Modelling with Likelihood and Bayes |

2015-02-27 | itsadug | Interpreting Time Series and Autocorrelated Data Using GAMMs |

2015-02-27 | lcmm | Extended Mixed Models Using Latent Classes and Latent Processes |

2015-02-27 | mads | Multi-Analysis Distance Sampling |

2015-02-27 | NormPsy | Normalisation of Psychometric Tests |

2015-02-27 | openNLP | Apache OpenNLP Tools Interface |

2015-02-27 | RcppEigen | Rcpp Integration for the Eigen Templated Linear Algebra Library |

2015-02-27 | RObsDat | Data Mangement for Hydrology and Beyond Using the Observations Data Model |

2015-02-27 | spatstat | Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests |

2015-02-26 | amen | Additive and Multiplicative Effects Models for Networks and Relational Data |

2015-02-26 | CEoptim | Cross-Entropy R Package for Optimization |

2015-02-26 | CNVassoc | Association Analysis of CNV Data and Imputed SNPs |

2015-02-26 | dplRCon | Concordance for Dendroclimatology |

2015-02-26 | exact2x2 | Exact Conditional Tests and Confidence Intervals for 2x2 tables |

2015-02-26 | forecast | Forecasting Functions for Time Series and Linear Models |

2015-02-26 | FuzzyNumbers | Tools to Deal with Fuzzy Numbers |

2015-02-26 | gte | Generalized Turnbull's Estimator |

2015-02-26 | HardyWeinberg | Graphical Tests for Hardy-Weinberg Equilibrium |

2015-02-26 | multicool | Permutations of Multisets in Cool-Lex Order |

2015-02-26 | nlstools | Tools for Nonlinear Regression Analysis |

2015-02-26 | nortest | Tests for Normality |

2015-02-26 | ore | An R Interface to the Oniguruma Regular Expression Library |

2015-02-26 | PDQutils | PDQ Functions via Gram Charlier, Edgeworth, and Cornish Fisher Approximations |

2015-02-26 | polyCub | Cubature over Polygonal Domains |

2015-02-26 | PRROC | Precision-Recall and ROC Curves for Weighted and Unweighted Data |

2015-02-26 | R2SWF | Convert R Graphics to Flash Animations |

2015-02-26 | RcmdrPlugin.ROC | Rcmdr Receiver Operator Characteristic Plug-In PACKAGE |

2015-02-26 | RODBC | ODBC Database Access |

2015-02-26 | SurvCorr | Correlation of Bivariate Survival Times |

2015-02-25 | aroma.apd | A Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated] |

2015-02-25 | BoolNet | Construction, Simulation and Analysis of Boolean Networks |

2015-02-25 | dunn.test | Dunn's Test of Multiple Comparisons Using Rank Sums |

2015-02-25 | FGSG | Feature Grouping and Selection Over an Undirected Graph |

2015-02-25 | GAabbreviate | Abbreviating Questionnaires (or Other Measures) Using Genetic Algorithms |

2015-02-25 | ihs | Inverse Hyperbolic Sine Distribution |

2015-02-25 | iqLearn | Interactive Q-Learning |

2015-02-25 | lgcp | Log-Gaussian Cox Process |

2015-02-25 | momentchi2 | Moment-Matching Methods for Weighted Sums of Chi-Squared Random Variables |

2015-02-25 | multiPIM | Variable Importance Analysis with Population Intervention Models |

2015-02-25 | multitaper | Multitaper Spectral Analysis Tools |

2015-02-25 | MuMIn | Multi-Model Inference |

2015-02-25 | npmv | Nonparametric Comparison of Multivariate Samples |

2015-02-25 | R.matlab | Read and Write MAT Files and Call MATLAB from Within R |

2015-02-25 | SDD | Serial Dependence Diagrams |

2015-02-25 | sgt | Skewed Generalized T Distribution |

2015-02-24 | AER | Applied Econometrics with R |

2015-02-24 | aroma.cn | Copy-Number Analysis of Large Microarray Data Sets |

2015-02-24 | assist | A Suite of R Functions Implementing Spline Smoothing Techniques |

2015-02-24 | autopls | Partial Least Squares Regression with Backward Selection of Predictors |

2015-02-24 | babar | Bayesian Bacterial Growth Curve Analysis in R |

2015-02-24 | boot | Bootstrap Functions (Originally by Angelo Canty for S) |

2015-02-24 | cairoDevice | Cairo-based Graphics Device Driver |

2015-02-24 | cds | Constrained Dual Scaling for Detecting Response Styles |

2015-02-24 | clinfun | Clinical Trial Design and Data Analysis Functions |

2015-02-24 | coloredICA | Implementation of Colored Independent Component Analysis and Spatial Colored Independent Component Analysis |

2015-02-24 | CombinS | Construction Methods of some Series of PBIB Designs |

2015-02-24 | coxsei | Fitting a CoxSEI Model |

2015-02-24 | FFD | Freedom from Disease |

2015-02-24 | iBATCGH | Integrative Bayesian Analysis of Transcriptomic and CGH Data |

2015-02-24 | ipred | Improved Predictors |

2015-02-24 | js | Tools for Working with JavaScript in R |

2015-02-24 | likelihood | Methods for Maximum Likelihood Estimation |

2015-02-24 | maxstat | Maximally Selected Rank Statistics |

2015-02-24 | mwa | Causal Inference in Spatiotemporal Event Data |

2015-02-24 | party | A Laboratory for Recursive Partytioning |

2015-02-24 | phenability | Nonparametric Stability Analysis |

2015-02-24 | rasterVis | Visualization Methods for Raster Data |

2015-02-24 | rfUtilities | Random Forests Model Selection and Performance Evaluation |

2015-02-24 | rpart | Recursive Partitioning and Regression Trees |

2015-02-24 | spatialEco | Spatial Analysis and Modeling |

2015-02-24 | speaq | Tools for Nuclear Magnetic Resonance Spectrum Alignment and Quantitative Analysis |

2015-02-24 | survival | Survival Analysis |

2015-02-24 | SvyNom | Nomograms for Right-Censored Outcomes from Survey Designs |

2015-02-23 | ACNE | Affymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization |

2015-02-23 | calmate | Improved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation |

2015-02-23 | CDM | Cognitive Diagnosis Modeling |

2015-02-23 | CopulaREMADA | Copula Mixed Effect Models for Bivariate Meta-Analysis of Diagnostic Test Accuracy Studies |

2015-02-23 | crrstep | Stepwise Covariate Selection for the Fine & Gray Competing Risks Regression Model |

2015-02-23 | fitdistrplus | Help to Fit of a Parametric Distribution to Non-Censored or Censored Data |

2015-02-23 | games | Statistical Estimation of Game-Theoretic Models |

2015-02-23 | geotopbricks | An R Plug-in for the Distributed Hydrological Model GEOtop |

2015-02-23 | git2r | Provides Access to Git Repositories |

2015-02-23 | gmnl | Multinomial Logit Models with Random Parameters |

2015-02-23 | miceadds | Some Additional Multiple Imputation Functions, Especially for 'mice' |

2015-02-23 | nephro | Biostatistics Utilities for Nephrology |

2015-02-23 | powerMediation | Power/Sample Size Calculation for Mediation Analysis |

2015-02-23 | PSCBS | Analysis of Parent-Specific DNA Copy Numbers |

2015-02-23 | RcppAPT | Rcpp Interface to the APT Package Manager |

2015-02-23 | R.filesets | Easy Handling of and Access to Files Organized in Structured Directories |

2015-02-23 | rfPermute | Estimate Permutation p-Values for Random Forest Importance Metrics |

2015-02-23 | RJSDMX | R Interface to SDMX Web Services |

2015-02-23 | RRreg | Correlation and Regression Analyses for Randomized Response Data |

2015-02-23 | Rsymphony | SYMPHONY in R |

2015-02-23 | SamplerCompare | A Framework for Comparing the Performance of MCMC Samplers |

2015-02-23 | spaMM | Mixed Models, Particularly Spatial GLMMs |

2015-02-23 | stocks | Fast Functions for Stock Market Analysis |

2015-02-23 | strataG | Summaries and Population Structure Analyses of Haplotypic and Genotypic Data |

2015-02-23 | SurvLong | Analysis of Proportional Hazards Model with Sparse Longitudinal Covariates |

2015-02-23 | wahc | Autocorrelation and Heteroskedasticity Correction in Fixed Effect Panel Data Model |

2015-02-23 | wmlf | Wavelet Leaders in Multifractal Analysis |

2015-02-22 | AsynchLong | Regression Analysis of Sparse Asynchronous Longitudinal Data |

2015-02-22 | BIFIEsurvey | Tools for Survey Statistics in Educational Assessment |

2015-02-22 | FRESA.CAD | FeatuRE Selection Algorithms for Computer Aided Diagnosis |

2015-02-22 | highTtest | Simultaneous Critical Values for t-Tests in Very High Dimensions |

2015-02-22 | mapDK | Maps of Denmark |

2015-02-22 | protoclust | Hierarchical Clustering with Prototypes |

2015-02-22 | pvrank | Rank Correlations |

2015-02-22 | Rcmdr | R Commander |

2015-02-22 | R.devices | Unified Handling of Graphics Devices |

2015-02-22 | RDota | Data Analysis Toolbox for Dota2 |

2015-02-22 | R.huge | Methods for Accessing Huge Amounts of Data [deprecated] |

2015-02-22 | rpg | Easy Interface to Advanced PostgreSQL Features |

2015-02-22 | SIMMS | Subnetwork Integration for Multi-Modal Signatures |

2015-02-22 | ssize.fdr | Sample Size Calculations for Microarray Experiments |

2015-02-22 | syuzhet | Extracts Sentiment and Sentiment-Derived Plot Arcs from Text |

2015-02-22 | TAQMNGR | Manage Tick-by-Tick Transaction Data |

2015-02-21 | CaDENCE | Conditional Density Estimation Network Construction and Evaluation |

2015-02-21 | frm | Regression Analysis of Fractional Responses |

2015-02-21 | frmhet | Regression Analysis of Fractional Responses Under Unobserved Heterogeneity |

2015-02-21 | Grid2Polygons | Convert Spatial Grids to Polygons |

2015-02-21 | lmeNBBayes | Compute the Personalized Activity Index Based on a Flexible Bayesian Negative Binomial Model |

2015-02-21 | markovchain | Easy Handling Discrete Time Markov Chains |

2015-02-21 | pacman | Package Management Tool |

2015-02-21 | rlm | Robust Fitting of Linear Model |

2015-02-21 | RSurvey | Analysis of Spatially Distributed Data |

2015-02-21 | synthpop | Generating Synthetic Versions of Sensitive Microdata for Statistical Disclosure Control |

2015-02-20 | exactRankTests | Exact Distributions for Rank and Permutation Tests |

2015-02-20 | Factoshiny | Perform Factorial Analysis from FactoMineR with a Shiny Application |

2015-02-20 | faisalconjoint | Faisal Conjoint Model: A New Approach to Conjoint Analysis |

2015-02-20 | fastpseudo | Fast Pseudo Observations |

2015-02-20 | ForeCA | Forecastable Component Analysis |

2015-02-20 | foreign | Read Data Stored by Minitab, S, SAS, SPSS, Stata, Systat, Weka, dBase, .. |

2015-02-20 | hisse | Hidden State Speciation and Extinction |

2015-02-20 | lodGWAS | Genome-Wide Association Analysis of a Biomarker Accounting for Limit of Detection |

2015-02-20 | mmpp | Various Similarity and Distance Metrics for Marked Point Processes |

2015-02-20 | msda | Multi-Class Sparse Discriminant Analysis |

2015-02-20 | nlme | Linear and Nonlinear Mixed Effects Models |

2015-02-20 | outbreaker | Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data |

2015-02-20 | plspm | Tools for Partial Least Squares Path Modeling (PLS-PM) |

2015-02-20 | pullword | R Interface to Pullword Service |

2015-02-20 | R.methodsS3 | S3 Methods Simplified |

2015-02-20 | tseries | Time Series Analysis and Computational Finance |

2015-02-20 | UBCRM | Functions to Simulate and Conduct Dose-Escalation Phase I Studies |

2015-02-20 | WhopGenome | High-Speed Processing of VCF, FASTA and Alignment Data |

2015-02-19 | bootstrap | Functions for the Book "An Introduction to the Bootstrap" |

2015-02-19 | disparityfilter | Disparity Filter Algorithm of Weighted Network |

2015-02-19 | EcoGenetics | Analysis of Phenotypic, Genotypic and Environmental Data |

2015-02-19 | ega | Error Grid Analysis |

2015-02-19 | fgpt | Floating Grid Permutation Technique |

2015-02-19 | npIntFactRep | Nonparametric Interaction Tests for Factorial Designs with Repeated Measures |

2015-02-19 | partDSA | Partitioning Using Deletion, Substitution, and Addition Moves |

2015-02-19 | precintcon | Precipitation Intensity, Concentration and Anomaly Analysis |

2015-02-19 | R.rsp | Dynamic Generation of Scientific Reports |

2015-02-19 | sharpshootR | A Soil Survey Toolkit |

2015-02-19 | Simile | Interact with Simile Models |

2015-02-18 | broom | Convert Statistical Analysis Objects into Tidy Data Frames |

2015-02-18 | clues | Clustering Method Based on Local Shrinking |

2015-02-18 | clusterGeneration | Random Cluster Generation (with Specified Degree of Separation) |

2015-02-18 | frmpd | Regression Analysis of Panel Fractional Responses |

2015-02-18 | lbfgsb3 | Limited Memory BFGS Minimizer with Bounds on Parameters |

2015-02-18 | modMax | Community Structure Detection via Modularity Maximization |

2015-02-18 | MortalitySmooth | Smoothing and Forecasting Poisson Counts with P-Splines |

2015-02-18 | oaxaca | Blinder-Oaxaca Decomposition |

2015-02-18 | PST | Probabilistic Suffix Trees and Variable Length Markov Chains |

2015-02-18 | rjade | A Clean, Whitespace-Sensitive Template Language for Writing HTML |

2015-02-18 | RNiftyReg | Medical Image Registration Using the NiftyReg Library |

2015-02-18 | segmented | Regression Models with Breakpoints/Changepoints Estimation |

2015-02-18 | semsfa | Semiparametric Estimation of Stochastic Frontier Models |

2015-02-17 | analyz | Model Layer for Automatic Data Analysis via CSV File Interpretation |

2015-02-17 | ATE | Inference for Average Treatment Effects using Covariate Balancing |

2015-02-17 | eegkit | Toolkit for Electroencephalography Data |

2015-02-17 | fastcluster | Fast Hierarchical Clustering Routines for R and Python |

2015-02-17 | GaDiFPT | First Passage Time Simulation for Gaussian Diffusion Processes |

2015-02-17 | gWidgets2RGtk2 | Implementation of gWidgets2 for the RGtk2 Package |

2015-02-17 | hpcwld | High Performance Cluster Models Based on Kiefer-Wolfowitz Recursion |

2015-02-17 | IBDhaploRtools | Functions for the Analysis of IBD Haplo Output |

2015-02-17 | IBDLabels | Convert Between Different IBD-State Labelling Schemes |

2015-02-17 | lava | Latent Variable Models |

2015-02-17 | linbin | Binning and Plotting of Linearly Referenced Data |

2015-02-17 | multisensi | Multivariate Sensitivity Analysis |

2015-02-17 | palaeoSig | Significance Tests for Palaeoenvironmental Reconstructions |

2015-02-17 | Rlabkey | Data Exchange Between R and LabKey Server |

2015-02-17 | Sleuth3 | Data Sets from Ramsey and Schafer's "Statistical Sleuth (3rd Ed)" |

2015-02-17 | sorvi | Finnish Open Government Data Toolkit |

2015-02-16 | BANFF | Bayesian Network Feature Finder |

2015-02-16 | bde | Bounded Density Estimation |

2015-02-16 | DNMF | Discriminant Non-Negative Matrix Factorization |

2015-02-16 | FDboost | Boosting Functional Regression Models |

2015-02-16 | fdrDiscreteNull | False Discovery Rate Procedure Under Discrete Null Distributions |

2015-02-16 | glba | General Linear Ballistic Accumulator Models |

2015-02-16 | HDclassif | High Dimensional Supervised Classification and Clustering |

2015-02-16 | HDPenReg | High-Dimensional Penalized Regression |

2015-02-16 | HH | Statistical Analysis and Data Display: Heiberger and Holland |

2015-02-16 | Hmisc | Harrell Miscellaneous |

2015-02-16 | LPS | Linear Predictor Score, for Binary Inference from Multiple Continuous Variables |

2015-02-16 | mets | Analysis of Multivariate Event Times |

2015-02-16 | PCIT | Partial Correlation Coefficient with Information Theory |

2015-02-16 | phia | Post-Hoc Interaction Analysis |

2015-02-16 | PKfit | Data Analysis Tool for Pharmacokinetics |

2015-02-16 | qrNLMM | Quantile Regression for Nonlinear Mixed-Effects Models |

2015-02-16 | R4CouchDB | An R Convenience Layer for CouchDB |

2015-02-16 | ramps | Bayesian Geostatistical Modeling with RAMPS |

2015-02-16 | randomUniformForest | Random Uniform Forests for Classification, Regression and Unsupervised Learning |

2015-02-16 | retistruct | Retinal Reconstruction Program |

2015-02-16 | Rlibeemd | Ensemble Empirical Mode Decomposition (EEMD) and Its Complete Variant (CEEMDAN) |

2015-02-16 | rms | Regression Modeling Strategies |

2015-02-16 | saeSim | Simulation Tools for Small Area Estimation |

2015-02-16 | SCGLR | Supervised Component Generalized Linear Regression |

2015-02-16 | sybilEFBA | Using Gene Expression Data to Improve Flux Balance Analysis Predictions |

2015-02-16 | wbs | Wild Binary Segmentation for Multiple Change-Point Detection |

2015-02-15 | BOIN | Bayesian Optimal Interval Design for Phase I Clinical Trials |

2015-02-15 | MultiLCIRT | Multidimensional Latent Class Item Response Theory Models |

2015-02-15 | nFCA | Numerical Formal Concept Analysis for Systematic Clustering |

2015-02-15 | sapa | Spectral Analysis for Physical Applications |

2015-02-15 | SciencesPo | A Tool Set for Analyzing Political Behavior Data |

2015-02-15 | smbinning | Optimal Binning for Scoring Modeling |

2015-02-15 | sparseBC | Sparse Biclustering of Transposable Data |

2015-02-15 | ztable | Zebra-Striped Tables in LaTeX and HTML Formats |

2015-02-14 | BayesBridge | Bridge Regression |

2015-02-14 | glmvsd | Variable Selection Deviation Measures and Instability Tests for High-Dimensional Generalized Linear Models |

2015-02-14 | matrixStats | Methods that Apply to Rows and Columns of a Matrix |

2015-02-14 | minimist | Parse Argument Options |

2015-02-14 | moonBook | Functions and Datasets for the Book by Keon-Woong Moon |

2015-02-14 | phytotools | Phytoplankton Production Tools |

2015-02-14 | Rborist | Extensible, Parallelizable Implementation of the Random Forest Algorithm |

2015-02-14 | rsdmx | Tools for Reading SDMX Data and Metadata |

2015-02-13 | BSGS | Bayesian Sparse Group Selection |

2015-02-13 | cati | Community Assembly by Traits: Individuals and Beyond |

2015-02-13 | corrgram | Plot a Correlogram |

2015-02-13 | demi | Differential Expression from Multiple Indicators |

2015-02-13 | eggCounts | Hierarchical Modelling of Faecal Egg Counts |

2015-02-13 | FedData | Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources |

2015-02-13 | mldr | Exploratory Data Analysis and Manipulation of Multi-Label Data Sets |

2015-02-13 | pampe | Implementation of the Panel Data Approach Method for Program Evaluation |

2015-02-13 | plotGoogleMaps | Plot Spatial or Spatio-Temporal Data Over Google Maps |

2015-02-13 | ROAuth | R Interface For OAuth |

2015-02-13 | rockchalk | Regression Estimation and Presentation |

2015-02-13 | shinyTree | jsTree Bindings for Shiny |

2015-02-13 | tbart | Teitz and Bart's p-Median Algorithm |

2015-02-13 | unittest | TAP-Compliant Unit Testing |

2015-02-13 | vdg | Variance Dispersion Graphs and Fraction of Design Space Plots |

2015-02-13 | XBRL | Extraction of Business Financial Information from XBRL Documents |

2015-02-12 | estimability | Estimability Tools for Linear Models |

2015-02-12 | FastKNN | Fast k-Nearest Neighbors |

2015-02-12 | gaselect | Genetic Algorithm (GA) for Variable Selection from High-Dimensional Data |

2015-02-12 | geigen | Calculate Generalized Eigenvalues of a Matrix Pair |

2015-02-12 | kselection | Selection of K in K-Means Clustering |

2015-02-12 | mboost | Model-Based Boosting |

2015-02-12 | MTS | All-Purpose Toolkit for Analyzing Multivariate Time Series (MTS) and Estimating Multivariate Volatility Models |

2015-02-12 | MXM | Discovering Multiple, Statistically-Equivalent Signatures |

2015-02-12 | poplite | Tools for Simplifying the Population and Querying of SQLite Databases |

2015-02-12 | RSNPset | Efficient Score Statistics For Genome-Wide SNP Set Analysis |

2015-02-12 | sgof | Multiple Hypothesis Testing |

2015-02-12 | SphericalK | Spherical K-Function |

2015-02-12 | vows | Voxelwise Semiparametrics |

2015-02-11 | ARPobservation | Tools for Simulating Direct Behavioral Observation Recording Procedures Based on Alternating Renewal Processes |

2015-02-11 | Ckmeans.1d.dp | Optimal k-Means Clustering for One-Dimensional Data |

2015-02-11 | class | Functions for Classification |

2015-02-11 | COMMUNAL | Robust Selection of Cluster Number K |

2015-02-11 | condMVNorm | Conditional Multivariate Normal Distribution |

2015-02-11 | DataCombine | Tools for Easily Combining and Cleaning Data Sets |

2015-02-11 | gramEvol | Grammatical Evolution for R |

2015-02-11 | KernSmooth | Functions for Kernel Smoothing Supporting Wand & Jones (1995) |

2015-02-11 | nnet | Feed-Forward Neural Networks and Multinomial Log-Linear Models |

2015-02-11 | pez | Phylogenetics for the Environmental Sciences |

2015-02-11 | presens | R Interface for PreSens Fiber Optic Data |

2015-02-11 | rNMF | Robust Nonnegative Matrix Factorization |

2015-02-11 | SeqFeatR | A Tool to Associate FASTA Sequences and Features |

2015-02-11 | shiny | Web Application Framework for R |

2015-02-11 | shinybootstrap2 | Bootstrap 2 Web Components for Use with Shiny |

2015-02-11 | simPH | Tools for Simulating and Plotting Quantities of Interest Estimated From Cox Proportional Hazards Models |

2015-02-11 | spatial | Functions for Kriging and Point Pattern Analysis |

2015-02-11 | tmg | Truncated Multivariate Gaussian Sampling |

2015-02-11 | treelet | An Adaptive Multi-Scale Basis for High-Dimensional, Sparse and Unordered Data |

2015-02-11 | tscount | Analysis of Count Time Series |

2015-02-11 | R Based Twitter Client | |

2015-02-11 | xergm | Extensions of Exponential Random Graph Models |

2015-02-10 | asbio | A Collection of Statistical Tools for Biologists |

2015-02-10 | cccp | Cone Constrained Convex Problems |

2015-02-10 | clue | Cluster Ensembles |

2015-02-10 | cmvnorm | The Complex Multivariate Gaussian Distribution |

2015-02-10 | graphscan | Cluster Detection with Hypothesis Free Scan Statistic |

2015-02-10 | gridGraphics | Redraw Base Graphics Using grid Graphics |

2015-02-10 | heritability | Marker-Based Estimation of Heritability Using Individual Plant or Plot Data |

2015-02-10 | HSROC | Meta-Analysis of Diagnostic Test Accuracy when Reference Test is Imperfect |

2015-02-10 | ICAFF | Imperialist Competitive Algorithm |

2015-02-10 | kSamples | K-Sample Rank Tests and their Combinations |

2015-02-10 | lmm | Linear Mixed Models |

2015-02-10 | MSBVAR | Markov-Switching, Bayesian, Vector Autoregression Models |

2015-02-10 | nat | NeuroAnatomy Toolbox for Analysis of 3D Image Data |

2015-02-10 | pan | Multiple Imputation for Multivariate Panel or Clustered Data |

2015-02-10 | psbcGroup | Penalized Semiparametric Bayesian Cox Models with Shrinkage and Grouping Priors |

2015-02-10 | RInSp | R Individual Specialization (RInSp) |

2015-02-10 | SegCorr | Detecting Correlated Genomic Regions |

2015-02-10 | SoftClustering | Soft Clustering Algorithms |

2015-02-10 | StanHeaders | C++ Header Files for Stan |

2015-02-10 | tau | Text Analysis Utilities |

2015-02-10 | textcat | N-Gram Based Text Categorization |

2015-02-10 | treeclim | Numerical Calibration of Proxy-Climate Relationships |

2015-02-10 | VNM | Using V-algorithm and Newton-Raphson Method to Obtain Multiple-objective Optimal Design |

2015-02-09 | BradleyTerry2 | Bradley-Terry Models |

2015-02-09 | DirichletReg | Dirichlet Regression in R |

2015-02-09 | excursions | Excursion Sets and Contour Credibility Regions for Random Fields |

2015-02-09 | geospt | Geostatistical Analysis and Design of Optimal Spatial Sampling Networks |

2015-02-09 | IFP | Identifying Functional Polymorphisms |

2015-02-09 | ivpanel | Instrumental Panel Data Models |

2015-02-09 | LARF | Local Average Response Functions for Instrumental Variable Estimation of Treatment Effects |

2015-02-09 | RPushbullet | R Interface to the Pushbullet Messaging Service |

2015-02-09 | rtfbs | Transcription Factor Binding Site Identification Tool |

2015-02-09 | SemiParBIVProbit | Semiparametric Bivariate Probit Modelling |

2015-02-09 | snpEnrichment | SNPs Enrichment Analysis |

2015-02-08 | cec2005benchmark | Benchmark for the CEC 2005 Special Session on Real-Parameter Optimization |

2015-02-08 | diffeR | Difference Metrics for Comparing Pairs of Maps |

2015-02-08 | h2o | H2O R Interface |

2015-02-08 | MetNorm | Statistical Methods for Normalizing Metabolomics Data |

2015-02-08 | nestedRanksTest | Mann-Whitney-Wilcoxon Test for Nested Ranks |

2015-02-08 | pracma | Practical Numerical Math Functions |

2015-02-08 | RcppMLPACK | Rcpp Integration for MLPACK Library |

2015-02-08 | recosystem | Recommender System using Matrix Factorization |

2015-02-08 | rfoaas | R Interface to FOAAS |

2015-02-08 | SemiCompRisks | Parametric and semi-parametric analysis of semi-competing risks data |

2015-02-08 | sns | Stochastic Newton Sampler (SNS) |

2015-02-08 | SVMMatch | Causal Effect Estimation and Diagnostics with Support Vector Machines |

2015-02-07 | klausuR | Multiple Choice Test Evaluation |

2015-02-07 | medflex | Flexible Mediation Analysis using Natural Effect Models |

2015-02-07 | randomNames | Random name generating function and data set |

2015-02-07 | Sabermetrics | Sabermetrics Functions For Baseball Analytics |

2015-02-06 | egcm | Engle-Granger Cointegration Models |

2015-02-06 | FactoMineR | Multivariate Exploratory Data Analysis and Data Mining |

2015-02-06 | FCMapper | Fuzzy Cognitive Mapping |

2015-02-06 | gee | Generalized Estimation Equation Solver |

2015-02-06 | knncat | Nearest-neighbor Classification with Categorical Variables |

2015-02-06 | micromap | Linked Micromap Plots |

2015-02-06 | mix | Estimation/Multiple Imputation for Mixed Categorical and Continuous Data |

2015-02-06 | mixAK | Multivariate Normal Mixture Models and Mixtures of Generalized Linear Mixed Models Including Model Based Clustering |

2015-02-06 | multirich | Calculate Multivariate Richness via UTC and sUTC |

2015-02-06 | ncdf | Interface to Unidata netCDF Data Files |

2015-02-06 | PANICr | PANIC Tests of Nonstationarity |

2015-02-06 | PoisNonNor | Simultaneous Generation of Count and Continuous Data |

2015-02-06 | poppr | Genetic Analysis of Populations With Mixed Reproduction |

2015-02-06 | pubmed.mineR | Text mining of PubMed Abstracts |

2015-02-06 | REPPlab | R Interface to EPP-lab, a Java Program for Exploratory Projection Pursuit |

2015-02-06 | rncl | An interface to the Nexus Class Library |

2015-02-06 | robustloggamma | Robust estimation of the generalized log gamma model |

2015-02-06 | seasonal | R interface to X-13ARIMA-SEATS |

2015-02-06 | SimilarityMeasures | Trajectory Similarity Measures |

2015-02-06 | sparseMVN | Multivariate Normal Functions for Sparse Covariance and Precision Matrices |

2015-02-06 | SpatPCA | Regularized Principal Component Analysis for Spatial Data |

2015-02-06 | TableMonster | Table Monster |

2015-02-06 | textreg | n-gram Text Regression, aka Concise Comparative Summarization |

2015-02-06 | tmle.npvi | Targeted Learning of a NP Importance of a Continuous Exposure |

2015-02-06 | varComp | Variance Component Models |

2015-02-05 | BayesMed | Default Bayesian Hypothesis Tests for Correlation, Partial Correlation, and Mediation |

2015-02-05 | bayesSurv | Bayesian Survival Regression with Flexible Error and Random Effects Distributions |

2015-02-05 | blmeco | Data Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan" |

2015-02-05 | ClueR | CLUster Evaluation (CLUE) |

2015-02-05 | Distance | Distance Sampling Detection Function and Abundance Estimation |

2015-02-05 | emplik2 | Empirical Likelihood Ratio Test for Two Samples with Censored Data |

2015-02-05 | fdatest | Interval Testing Procedure for Functional Data |

2015-02-05 | gamlss.spatial | Package to fit spatial data in gamlss |

2015-02-05 | HAC | Estimation, Simulation and Visualization of Hierarchical Archimedean Copulae (HAC) |

2015-02-05 | mada | Meta-Analysis of Diagnostic Accuracy |

2015-02-05 | mlxR | Simulation of Longitudinal Data |

2015-02-05 | mrds | Mark-Recapture Distance Sampling |

2015-02-05 | phytools | Phylogenetic Tools for comparative biology (and other things) |

2015-02-05 | replicationInterval | Replication Interval Functions |

2015-02-05 | smoothSurv | Survival Regression with Smoothed Error Distribution |

2015-02-05 | svKomodo | SciViews GUI API - Functions to interface with Komodo Edit/IDE |

2015-02-04 | BLCOP | Black-Litterman and Copula Opinion Pooling Frameworks |

2015-02-04 | catnet | Categorical Bayesian Network Inference |

2015-02-04 | gamlss.demo | Demos for GAMLSS |

2015-02-04 | gamlss.mx | A GAMLSS Add-on Package For Fitting Mixture Distributions |

2015-02-04 | gelnet | Generalized Elastic Nets |

2015-02-04 | GeneticTools | Collection of Genetic Data Analysis Tools |

2015-02-04 | kofnGA | A Genetic Algorithm for Fixed-Size Subset Selection |

2015-02-04 | LiblineaR | Linear Predictive Models Based on the LIBLINEAR C/C++ Library |

2015-02-04 | meta | General Package for Meta-Analysis |

2015-02-04 | mfp | Multivariable Fractional Polynomials |

2015-02-04 | miscFuncs | Miscellaneous Useful Functions |

2015-02-04 | mlr | Machine Learning in R |

2015-02-04 | netmeta | Network Meta-Analysis using Frequentist Methods |

2015-02-04 | pamctdp | Principal Axes Methods for Contingency Tables with Partition Structures on Rows and Columns |

2015-02-04 | partialAR | Partial Autoregression |

2015-02-04 | proxy | Distance and Similarity Measures |

2015-02-04 | rebus | Build Regular Expressions in a Human Readable Way |

2015-02-04 | rpart.plot | Plot rpart Models. An Enhanced Version of plot.rpart |

2015-02-04 | sparseHessianFD | Numerical Estimation of Sparse Hessians |

2015-02-04 | statcheck | Extract Statistics from Articles and Recompute P Values |

2015-02-04 | Tides | Quasi-Periodic Time Series Characteristics |

2015-02-04 | trustOptim | Trust Region Optimization for Nonlinear Functions with Sparse Hessians |

2015-02-03 | AncestryMapper | Assigning Ancestry Based on Population References |

2015-02-03 | BBmisc | Miscellaneous Helper Functions for B. Bischl |

2015-02-03 | BinOrdNonNor | Concurrent Generation of Binary, Ordinal and Continuous Data |

2015-02-03 | biogram | N-Gram Analysis of Biological Sequences |

2015-02-03 | CEC | Cross-Entropy Clustering |

2015-02-03 | DetMCD | DetMCD Algorithm (Robust and Deterministic Estimation of Location and Scatter) |

2015-02-03 | distrDoc | Documentation for Packages distr, distrEx, distrSim, distrTEst, distrTeach, distrMod, and distrEllipse |

2015-02-03 | divo | Tools for Analysis of Diversity and Similarity in Biological Systems |

2015-02-03 | FactoClass | Combination of Factorial Methods and Cluster Analysis |

2015-02-03 | gamlss | Generalised Additive Models for Location Scale and Shape |

2015-02-03 | gamlss.add | GAMLSS Extra Additive terms |

2015-02-03 | gamlss.cens | Fitting an interval response variable using gamlss.family distributions |

2015-02-03 | gamlss.dist | Distributions To Be Used For GAMLSS Modelling |

2015-02-03 | gamlss.tr | Generating and fitting truncated (gamlss.family) distributions |

2015-02-03 | gamlss.util | GAMLSS Utilities |

2015-02-03 | llama | Leveraging Learning to Automatically Manage Algorithms |

2015-02-03 | MatrixEQTL | Matrix eQTL: Ultra fast eQTL analysis via large matrix operations |

2015-02-03 | MetaLandSim | Metapopulation and Landscape Simulation |

2015-02-03 | mpt | Multinomial Processing Tree (MPT) Models |

2015-02-03 | netgen | Network Generator for Combinatorial Graph Problems |

2015-02-03 | NMOF | Numerical Methods and Optimization in Finance |

2015-02-03 | parallelMap | Unified interface to Some Popular Parallelization Back-ends for Interactive Usage and Package Development |

2015-02-03 | ParamHelpers | Helpers for Parameters in Black-Box Optimization, Tuning and Machine Learning |

2015-02-03 | poisDoubleSamp | Confidence Intervals with Poisson Double Sampling |

2015-02-03 | QuasiSeq | Analyzing RNA Sequence Count Tables Using Quasi-likelihood |

2015-02-03 | qvcalc | Quasi Variances for Factor Effects in Statistical Models |

2015-02-03 | RandomFields | Simulation and Analysis of Random Fields |

2015-02-03 | RcmdrPlugin.survival | R Commander Plug-in for the survival Package |

2015-02-03 | relimp | Relative Contribution of Effects in a Regression Model |

2015-02-03 | RPPairwiseDesign | Resolvable partially pairwise balanced design and Space-filling design via association scheme |

2015-02-03 | SAENET | A Stacked Autoencoder Implementation with Interface to 'neuralnet' |

2015-02-03 | seacarb | Seawater Carbonate Chemistry |

2015-02-03 | stagePop | Modelling the Population Dynamics of a Stage-Structured Species in Continuous Time |

2015-02-03 | wgaim | Whole Genome Average Interval Mapping for QTL Detection using Mixed Models |

2015-02-02 | abd | The Analysis of Biological Data |

2015-02-02 | lmeNB | Compute the Personalized Activity Index Based on a Negative Binomial Model |

2015-02-02 | lmom | L-moments |

2015-02-02 | lmomRFA | Regional frequency analysis using L-moments |

2015-02-02 | multicon | Multivariate Constructs |

2015-02-02 | relations | Data Structures and Algorithms for Relations |

2015-02-02 | royston | Royston's H Test: Multivariate Normality Test |

2015-02-02 | Rsampletrees | Sampletrees Input/Output Processing |

2015-02-02 | SETPath | Spiked Eigenvalue Test for Pathway data |

2015-02-02 | tripEstimation | Metropolis Sampler and Supporting Functions for Estimating Animal Movement from Archival Tags and Satellite Fixes |

2015-02-02 | twang | Toolkit for Weighting and Analysis of Nonequivalent Groups |

2015-02-01 | birk | MA Birk's Functions |

2015-02-01 | CompRandFld | Composite-Likelihood Based Analysis of Random Fields |

2015-02-01 | curl | A Connection Interface to Libcurl |

2015-02-01 | DFIT | Differential Functioning of Items and Tests |

2015-02-01 | fclust | Fuzzy Clustering |

2015-02-01 | GWmodel | Geographically-Weighted Models |

2015-02-01 | hbm | Hierarchical Block Matrix Analysis |

2015-01-31 | BayesCR | Bayesian Analysis of Censored Regression Models Under Scale Mixture of Skew Normal Distributions |

2015-01-31 | cluster | Cluster Analysis Extended Rousseeuw et al |

2015-01-31 | d3Network | Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R |

2015-01-31 | dendextend | Extending R's Dendrogram Functionality |

2015-01-31 | infra | An Infrastructure Proxy Function |

2015-01-31 | LMERConvenienceFunctions | Model Selection and Post-hoc Analysis for (G)LMER Models |

2015-01-31 | multiAssetOptions | Finite Difference Method for Multi-Asset Option Valuation |

2015-01-31 | opencpu | A System for Embedded Scientific Computing and Reproducible Research with R |

2015-01-31 | RcppStreams | Rcpp Integration of the Streamulus DSEL for Stream Processing |

2015-01-30 | brewdata | Extracting Usable Data from the Grad Cafe Results Search |

2015-01-30 | copBasic | General Copula Theory and Many Utility Functions |

2015-01-30 | GOplot | Visualization Of Functional Analysis Data |

2015-01-30 | kissmig | a Keep It Simple Species Migration Model |

2015-01-30 | mvoutlier | Multivariate outlier detection based on robust methods |

2015-01-30 | P2C2M | Posterior Predictive Checks of Coalescent Models |

2015-01-30 | ppmlasso | Point Process Models with LASSO Penalties |

2015-01-30 | SmarterPoland | Tools for Accessing Various Datasets Developed by the Foundation SmarterPoland.pl |

2015-01-30 | stylo | Functions for a Variety of Stylometric Analyses |

2015-01-29 | AGSDest | Estimation in Adaptive Group Sequential Trials |

2015-01-29 | biotools | Tools for Biometry and Applied Statistics in Agricultural Science |

2015-01-29 | cchs | Cox Model for Case-Cohort Data with Stratified Subcohort-Selection |

2015-01-29 | devEMF | EMF Graphics Output Device |

2015-01-29 | elastic | General Purpose Interface to Elasticsearch |

2015-01-29 | GlobalOptions | Generate Functions to Get or Set Global Options |

2015-01-29 | mousetrack | Mouse-Tracking Measures from Trajectory Data |

2015-01-29 | packrat | A Dependency Management System for Projects and their R Package Dependencies |

2015-01-29 | portfolio | Analysing equity portfolios |

2015-01-29 | roughrf | Roughened Random Forests for Binary Classification |

2015-01-29 | StatMatch | Statistical Matching |

2015-01-29 | teigen | Model-Based Clustering and Classification with the Multivariate t Distribution |

2015-01-28 | ald | The Asymmetric Laplace Distribution |

2015-01-28 | compareC | Compare Two Correlated C Indices with Right-censored Survival Outcome |

2015-01-28 | CpGassoc | Association Between Methylation and a Phenotype of Interest |

2015-01-28 | fanplot | Visualisation of Sequential Probability Distributions Using Fan Charts |

2015-01-28 | flower | Tools for characterizing flowering traits |

2015-01-28 | kedd | Kernel Estimator and Bandwidth Selection for Density and its Derivatives |

2015-01-28 | KFKSDS | Kalman Filter, Smoother and Disturbance Smoother |

2015-01-28 | LaF | Fast access to large ASCII files |

2015-01-28 | MarkowitzR | Statistical Significance of the Markowitz Portfolio |

2015-01-28 | marmap | Import, Plot and Analyze Bathymetric and Topographic Data |

2015-01-28 | metaMA | Meta-analysis for MicroArrays |

2015-01-28 | NeuralNetTools | Visualization and Analysis Tools for Neural Networks |

2015-01-28 | RInside | C++ Classes to Embed R in C++ Applications |

2015-01-28 | rLTP | R interface to LTP-Cloud service |

2015-01-28 | rvalues | R-values for Ranking in High-Dimensional Settings |

2015-01-28 | RWeka | R/Weka interface |

2015-01-28 | RWekajars | R/Weka interface jars |

2015-01-28 | SLHD | Maximin-Distance (Sliced) Latin Hypercube Designs |

2015-01-28 | SMNCensReg | Fitting Univariate Censored Regression Model Under the Family of Scale Mixture of Normal Distributions |

2015-01-28 | stochvol | Efficient Bayesian Inference for Stochastic Volatility (SV) Models |

2015-01-28 | VineCopula | Statistical Inference of Vine Copulas |

2015-01-28 | visualFields | Statistical Methods for Visual Fields |

2015-01-27 | CLME | Constrained Inference for Linear Mixed Effects Models |

2015-01-27 | cope | Coverage Probability Excursion (CoPE) Sets |

2015-01-27 | CORElearn | Classification, Regression and Feature Evaluation |

2015-01-27 | Ecfun | Functions for Ecdat |

2015-01-27 | FeedbackTS | Analysis of Feedback in Time Series |

2015-01-27 | funtimes | Functions for Time Series Analysis |

2015-01-27 | geoCount | Analysis and Modeling for Geostatistical Count Data |

2015-01-27 | gridSVG | Export grid Graphics as SVG |

2015-01-27 | HMR | Flux Estimation with Static Chamber Data |

2015-01-27 | Kernelheaping | Kernel Density Estimation for Heaped Data |

2015-01-27 | lawstat | Tools for Biostatistics, Public Policy, and Law |

2015-01-27 | MaxPro | Maximum Projection Designs |

2015-01-27 | MCMC.qpcr | Bayesian analysis of qRT-PCR data |

2015-01-27 | msarc | Draw Diagrams (mis)Representing the Results of Mass Spec Experiments |

2015-01-27 | munfold | Metric Unfolding |

2015-01-27 | mvnpermute | Generate New Multivariate Normal Samples from Permutations |

2015-01-27 | PerMallows | Permutations and Mallows Distributions |

2015-01-27 | PHENIX | Phenotypic Integration Index |

2015-01-27 | probFDA | Probabilistic Fisher Discriminant Analysis |

2015-01-27 | qrLMM | Quantile Regression for Linear Mixed-Effects Models |

2015-01-27 | quantification | Quantification of Qualitative Survey Data |

2015-01-27 | RcmdrPlugin.SCDA | Rcmdr Plugin for Designing and Analyzing Single-case Experiments |

2015-01-27 | reldist | Relative Distribution Methods |

2015-01-27 | SCMA | Single-Case Meta-Analysis |

2015-01-27 | SCRT | Single-Case Randomization Tests |

2015-01-27 | SCVA | Single-Case Visual Analysis |

2015-01-27 | sequenza | Copy Number Estimation from Tumor Genome Sequencing Data |

2015-01-27 | smacof | Multidimensional Scaling in R: SMACOF |

2015-01-27 | spBayes | Univariate and Multivariate Spatial-temporal Modeling |

2015-01-27 | TraMineR | Trajectory Miner: a Toolbox for Exploring and Rendering Sequences |

2015-01-27 | TraMineRextras | TraMineR Extension |

2015-01-27 | tsoutliers | Detection of Outliers in Time Series |

2015-01-27 | tufterhandout | Tufte-style html document format for rmarkdown |

2015-01-27 | unmarked | Models for Data from Unmarked Animals |

2015-01-26 | BayesVarSel | Bayes Factors, Model Choice And Variable Selection In Linear Models |

2015-01-26 | Disake | Discrete associated kernel estimators |

2015-01-26 | ltsk | Local Time Space Kriging |

2015-01-26 | metaRNASeq | Meta-analysis of RNA-seq data |

2015-01-26 | mountainplot | Mountain Plots, Folded Empirical Cumulative Distribution Plots |

2015-01-26 | R2BayesX | Estimate Structured Additive Regression Models with BayesX |

2015-01-26 | rmarkdown | Dynamic Documents for R |

2015-01-26 | sae2 | Small Area Estimation: Time-series Models |

2015-01-26 | simPop | Simulation of Synthetic Populations for Survey Data Considering Auxiliary Information |

2015-01-26 | SocialPosition | Social Position Indicators Construction Toolbox |

2015-01-26 | stsm | Structural Time Series Models |

2015-01-25 | mirtCAT | Computerized Adaptive Testing with Multidimensional Item Response Theory |

2015-01-25 | RegressionFactory | Expander Functions for Generating Full Gradient and Hessian from Single- and Multi-Slot Base Distributions |

2015-01-25 | reproducer | Reproduce Statistical Analyses and Meta-Analyses |

2015-01-25 | spate | Spatio-Temporal Modeling of Large Data Using a Spectral SPDE Approach |

2015-01-25 | wordnet | WordNet Interface |

2015-01-24 | CensRegMod | Fits Normal and Student-t Censored Regression Model |

2015-01-24 | NLP | Natural Language Processing Infrastructure |

2015-01-24 | RcppAnnoy | Rcpp Bindings for Annoy, a Library for Approximate Nearest Neighbors |

2015-01-24 | RcppGSL | Rcpp Integration for GNU GSL Vectors and Matrices |

2015-01-24 | rlist | A Toolbox for Non-tabular Data Manipulation |

2015-01-24 | simsalapar | Tools for Simulation Studies in Parallel with R |

2015-01-24 | webutils | Utility Functions for Web Applications |

2015-01-23 | blockcluster | Coclustering package for binary, contingency, continuous and categorical data-sets |

2015-01-23 | bnlearn | Bayesian Network Structure Learning, Parameter Learning and Inference |

2015-01-23 | compareGroups | Descriptive analysis by groups |

2015-01-23 | evmix | Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation |

2015-01-23 | ExomeDepth | Calls Copy Number Variants from Targeted Sequence Data |

2015-01-23 | grplasso | Fitting user specified models with Group Lasso penalty |

2015-01-23 | hysteresis | Tools for Modeling Rate-Dependent Hysteretic Processes and Ellipses |

2015-01-23 | LDAvis | Interactive Visualization of Topic Models |

2015-01-23 | LogicReg | Logic Regression |

2015-01-23 | ONETr | Efficient authenticated interaction with the O*NET API |

2015-01-23 | pbivnorm | Vectorized Bivariate Normal CDF |

2015-01-23 | PBSmodelling | GUI Tools Made Easy: Interact with Models and Explore Data |

2015-01-23 | pipeR | Multi-paradigm Pipeline Implementation |

2015-01-23 | Power2Stage | Power and Sample-size Distribution of 2-stage Bioequivalence Studies |

2015-01-23 | PowerTOST | Power and Sample Size Based on Two One-sided t-Tests (TOST) for (Bio)Equivalence Studies |

2015-01-23 | rcicr | Reverse correlation image classification toolbox |

2015-01-23 | RcmdrPlugin.temis | Graphical Integrated Text Mining Solution |

2015-01-23 | remMap | Regularized Multivariate Regression for Identifying Master Predictors |

2015-01-23 | rplos | Interface to PLoS Journals Search API |

2015-01-23 | timeDate | Rmetrics - Chronological and Calendar Objects |

2015-01-23 | timeSeries | Rmetrics - Financial Time Series Objects |

2015-01-22 | BcDiag | Diagnostics plots for Bicluster Data |

2015-01-22 | cec2013 | Benchmark functions for the Special Session and Competition on Real-Parameter Single Objective Optimization at CEC-2013 |

2015-01-22 | ESEA | ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis |

2015-01-22 | extRemes | Extreme Value Analysis |

2015-01-22 | googleVis | R Interface to Google Charts |

2015-01-22 | lba | Latent Budget Analysis for Compositional Data |

2015-01-22 | micromapST | Linked Micromap Plots for U. S. States |

2015-01-22 | mvSLOUCH | Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses |

2015-01-22 | rvertnet | Search VertNet, a Database of Vertebrate Specimen Records |

2015-01-22 | sig | Print Function Signatures |

2015-01-22 | spocc | R Interface to Species Occurrence Data Sources |

2015-01-22 | timeordered | Time-ordered and time-aggregated network analyses |

2015-01-22 | TRD | Transmission Ratio Distortion |

2015-01-22 | UsingR | Data Sets, etc. for the Text "Using R for Introductory Statistics", Second Edition |

2015-01-22 | wesanderson | A Wes Anderson Palette Generator |

2015-01-21 | ArfimaMLM | Arfima-MLM Estimation For Repeated Cross-Sectional Data |

2015-01-21 | bigGP | Distributed Gaussian Process Calculations |

2015-01-21 | conformal | Conformal Prediction for Regression and Classification |

2015-01-21 | coxphf | Cox regression with Firth's penalized likelihood |

2015-01-21 | crank | Completing Ranks |

2015-01-21 | D2C | Predicting Causal Direction from Dependency Features |

2015-01-21 | drmdel | Dual Empirical Likelihood Inference under Density Ratio Models in the Presence of Multiple Samples |

2015-01-21 | eventInterval | Sequential Event Interval Analysis |

2015-01-21 | gammSlice | Generalized additive mixed model analysis via slice sampling |

2015-01-21 | GeneNet | Modeling and Inferring Gene Networks |

2015-01-21 | ggm | Functions for graphical Markov models |

2015-01-21 | hht | The Hilbert-Huang Transform: Tools and Methods |

2015-01-21 | HiveR | 2D and 3D Hive Plots for R |

2015-01-21 | loa | Various Options and Add-ins for Lattice |

2015-01-21 | MenuCollection | Collection of Configurable GTK+ Menus |

2015-01-21 | MODISTools | MODIS Subsetting Tools |

2015-01-21 | nbpMatching | Functions for Optimal Non-bipartite Matching |

2015-01-21 | onlinePCA | Online Principal Component Analysis |

2015-01-21 | ordinal | Regression Models for Ordinal Data |

2015-01-21 | plotrix | Various plotting functions |

2015-01-21 | PracTools | Tools for Designing and Weighting Survey Samples |

2015-01-21 | psych | Procedures for Psychological, Psychometric, and Personality Research |

2015-01-21 | RgoogleMaps | Overlays on Google map tiles in R |

2015-01-21 | SemiParSampleSel | Semiparametric Sample Selection Modelling with Continuous or Discrete Response |

2015-01-21 | sensR | Thurstonian Models for Sensory Discrimination |

2015-01-21 | SoundexBR | Phonetic-Coding For Portuguese |

2015-01-20 | aroma.affymetrix | Analysis of Large Affymetrix Microarray Data Sets |

2015-01-20 | clinsig | Clinical Significance Functions |

2015-01-20 | prettyR | Pretty Descriptive Stats |

2015-01-20 | psychotools | Infrastructure for Psychometric Modeling |

2015-01-20 | psychotree | Recursive Partitioning Based on Psychometric Models |

2015-01-20 | snpRF | Random Forest for SNPs to Prevent X-chromosome SNP Importance Bias |

2015-01-19 | gsw | Gibbs Sea Water Functions |

2015-01-19 | imputeLCMD | A collection of methods for left-censored missing data imputation |

2015-01-19 | INLABMA | Bayesian Model Averaging with INLA |

2015-01-19 | mdatools | Multivariate Data Analysis for Chemometrics |

2015-01-19 | pathological | Path Manipulation Utilities |

2015-01-19 | spTimer | Spatio-Temporal Bayesian Modelling Using R |

2015-01-18 | CatDyn | Fishery Stock Assessment by Generalized Depletion Models |

2015-01-18 | hddtools | Hydrological Data Discovery Tools |

2015-01-18 | oro.nifti | Rigorous - NIfTI+ANALYZE+AFNI Input / Output |

2015-01-18 | survSNP | Power Calculations for SNP Studies with Censored Outcomes |

2015-01-17 | ALTopt | Optimal Experimental Designs for Accelerated Life Testing |

2015-01-17 | aroma.core | Core Methods and Classes Used by aroma.* Packages Part of The Aroma Framework |

2015-01-17 | devtools | Tools to Make Developing R Packages Easier |

2015-01-17 | flexmix | Flexible Mixture Modeling |

2015-01-17 | HTMLUtils | Facilitates Automated HTML Report Creation |

2015-01-17 | intergraph | Coercion Routines for Network Data Objects |

2015-01-17 | nontarget | Detecting, Combining and Filtering Isotope, Adduct and Homologue Series Relations in High-Resolution Mass Spectrometry (HRMS) Data |

2015-01-17 | onls | Orthogonal Nonlinear Least-Squares Regression |

2015-01-17 | rAverage | Parameter estimation for the averaging model of Information Integration Theory |

2015-01-16 | AICcmodavg | Model Selection and Multimodel Inference Based on (Q)AIC(c) |

2015-01-16 | anfis | Adaptive Neuro Fuzzy Inference System in R |

2015-01-16 | batchmeans | Consistent Batch Means Estimation of Monte Carlo Standard Errors |

2015-01-16 | bayesTFR | Bayesian Fertility Projection |

2015-01-16 | caretEnsemble | Ensembles of Caret Models |

2015-01-16 | chemometrics | Multivariate Statistical Analysis in Chemometrics |

2015-01-16 | disclapmix | Discrete Laplace mixture inference using the EM algorithm |

2015-01-16 | frbs | Fuzzy Rule-based Systems for Classification and Regression Tasks |

2015-01-16 | fwsim | Fisher-Wright Population Simulation |

2015-01-16 | jagsUI | A Wrapper Around rjags to Streamline JAGS Analyses |

2015-01-16 | latdiag | Draws diagrams useful for checking latent scales |

2015-01-16 | longpower | Sample size calculations for longitudinal data |

2015-01-16 | ngspatial | Fitting the centered autologistic and sparse spatial generalized linear mixed models for areal data |

2015-01-16 | OrdinalLogisticBiplot | Biplot representations of ordinal variables |

2015-01-16 | paleotree | Paleontological and Phylogenetic Analyses of Evolution |

2015-01-16 | pearson7 | Maximum Likelihood Inference for the Pearson VII Distribution with Shape Parameter 3/2 |

2015-01-16 | sphet | Estimation of spatial autoregressive models with and without heteroskedastic innovations |

2015-01-16 | stream | Infrastructure for Data Stream Mining |

2015-01-15 | bgeva | Binary Generalized Extreme Value Additive Models |

2015-01-15 | bmrm | Bundle Methods for Regularized Risk Minimization Package |

2015-01-15 | cmm | Categorical Marginal Models |

2015-01-15 | COPASutils | Tools for processing COPAS large-particle flow cytometer data |

2015-01-15 | EMP | Expected Maximum Profit Classification Performance Measure |

2015-01-15 | Evapotranspiration | Estimating Potential and Actual Evapotranspiration with Multiple Models |

2015-01-15 | lfl | Linguistic Fuzzy Logic |

2015-01-15 | mixer | Random graph clustering |

2015-01-15 | MultiMeta | Meta-analysis of Multivariate Genome Wide Association Studies |

2015-01-15 | RecordLinkage | Record Linkage in R |

2015-01-14 | ASPBay | Bayesian Inference on Causal Genetic Variants using Affected Sib-Pairs Data |

2015-01-14 | bayesDccGarch | The Bayesian Dynamic Conditional Correlation GARCH Model |

2015-01-14 | dplyr | A Grammar of Data Manipulation |

2015-01-14 | enaR | Tools for Ecological Network Analysis (ena) |

2015-01-14 | exams | Automatic Generation of Exams in R |

2015-01-14 | exCon | Interactive Exploration of Contour Data |

2015-01-14 | FuncMap | Hive Plots of R Package Function Calls |

2015-01-14 | HiDimMaxStable | Inference on High Dimensional Max-Stable Distributions |

2015-01-14 | mailR | A Utility to Send Emails from R |

2015-01-14 | MatrixModels | Modelling with Sparse And Dense Matrices |

2015-01-14 | MRH | Multi-Resolution Estimation of the Hazard Rate |

2015-01-14 | mztwinreg | Regression Models for Monozygotic Twin Data |

2015-01-14 | prabclus | Functions for Clustering of Presence-Absence, Abundance and Multilocus Genetic Data |

2015-01-14 | PrevMap | Geostatistical Modelling of Spatially Referenced Prevalence Data |

2015-01-14 | RbioRXN | Process Rhea, KEGG, MetaCyc, Unipathway biochemical reaction data |

2015-01-14 | robustbase | Basic Robust Statistics |

2015-01-14 | robustDA | Robust Mixture Discriminant Analysis |

2015-01-14 | rphast | Interface to PHAST Software for Comparative Genomics |

2015-01-14 | spnet | Plotting (social) networks on maps |

2015-01-14 | SPODT | Spatial Oblique Decision Tree |

2015-01-14 | stratigraph | Toolkit for the plotting and analysis of stratigraphic and palaeontological data |

2015-01-14 | WCE | Weighted Cumulative Exposure Models |

2015-01-13 | ads | Spatial point patterns analysis |

2015-01-13 | BCEA | Bayesian Cost Effectiveness Analysis |

2015-01-13 | bigrquery | An Interface to Google's BigQuery API |

2015-01-13 | chromer | Interface to Chromosome Counts Database API |

2015-01-13 | CorReg | Linear regression based on linear structure between covariates |

2015-01-13 | dst | Using Dempster-Shafer Theory |

2015-01-13 | FACTscorer | Scores the FACT and FACIT Family of Patient-Reported Outcome Measures |

2015-01-13 | fsia | Import and Analysis of OMR Data from FormScanner |

2015-01-13 | HierO | A graphical user interface for calculating power and sample size for hierarchical data |

2015-01-13 | hpoPlot | Functions for Plotting HPO Terms |

2015-01-13 | hwwntest | Tests of White Noise using Wavelets |

2015-01-13 | MBmca | Nucleic Acid Melting Curve Analysis on Microbead Surfaces with R |

2015-01-13 | metaplus | Robust Meta-analysis and Meta-regression |

2015-01-13 | mixor | Mixed-Effects Ordinal Regression Analysis |

2015-01-13 | PCPS | Principal Coordinates of Phylogenetic Structure |

2015-01-13 | RCALI | Calculation of the Integrated Flow of Particles between Polygons |

2015-01-13 | readMLData | Reading Machine Learning Benchmark Data Sets in Different Formats |

2015-01-13 | Rttf2pt1 | Package for ttf2pt1 program |

2015-01-13 | Sunder | Quantification of the effect of geographic versus environmental isolation on genetic differentiation |

2015-01-13 | traj | Trajectory Analysis |

2015-01-12 | afex | Analysis of Factorial Experiments |

2015-01-12 | classyfire | Robust multivariate classification using highly optimised SVM ensembles |

2015-01-12 | CNOGpro | Copy Numbers of Genes in prokaryotes |

2015-01-12 | DEEPR | Dirichlet-multinomial Evolutionary Event Profile Randomization (DEEPR) test |

2015-01-12 | earth | Multivariate Adaptive Regression Splines |

2015-01-12 | emdbook | Ecological models and data (book support) |

2015-01-12 | gamboostLSS | Boosting Methods for GAMLSS |

2015-01-12 | Geneland | Detection of structure from multilocus genetic data |

2015-01-12 | HomoPolymer | Theoretical Model to Simulate Radical Polymerization |

2015-01-12 | nabor | Wraps libnabo, a fast K Nearest Neighbour library for low dimensions |

2015-01-12 | penMSM | Estimating Regularized Multi-state Models Using L1 Penalties |

2015-01-12 | secrlinear | Spatially Explicit Capture-Recapture for Linear Habitats |

2015-01-12 | soundecology | Soundscape ecology |

2015-01-12 | stabs | Stability Selection with Error Control |

2015-01-12 | sysfonts | Loading System Fonts into R |

2015-01-12 | vegan | Community Ecology Package |

2015-01-11 | AGD | Analysis of Growth Data |

2015-01-11 | leiv | Bivariate Linear Errors-In-Variables Estimation |

2015-01-11 | neldermead | R port of the Scilab neldermead module |

2015-01-11 | patchSynctex | Communication between Editor and Viewer for Literate Programs |

2015-01-11 | quantreg | Quantile Regression |

2015-01-11 | regexr | Readable Regular Expressions |

2015-01-10 | aoristic | aoristic analysis with spatial output (kml) |

2015-01-10 | BACA | Bubble Chart to compare Biological Annotations by using DAVID |

2015-01-10 | celestial | Collection of common astronomical conversion routines |

2015-01-10 | classInt | Choose Univariate Class Intervals |

2015-01-10 | ctv | CRAN Task Views |

2015-01-10 | eRm | Extended Rasch Modeling |

2015-01-10 | hsphase | Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data |

2015-01-10 | kernlab | Kernel-based Machine Learning Lab |

2015-01-10 | MNM | Multivariate Nonparametric Methods. An Approach Based on Spatial Signs and Ranks |

2015-01-10 | neuRosim | Functions to Generate fMRI Data Including Activated Data, Noise Data and Resting State Data |

2015-01-10 | QCA | Qualitative Comparative Analysis |

2015-01-10 | RcppClassic | Deprecated 'classic' Rcpp API |

2015-01-10 | Rfacebook | Access to Facebook API via R |

2015-01-10 | RFmarkerDetector | Multivariate Analysis of Metabolomics Data using Random Forests |

2015-01-10 | stringdist | Approximate String Matching and String Distance Functions |

2015-01-10 | waveslim | Basic wavelet routines for one-, two- and three-dimensional signal processing |

2015-01-09 | blockTools | Block, Assign, and Diagnose Potential Interference in Randomized Experiments |

2015-01-09 | clickstream | Analyzes Clickstreams based on Markov Chains |

2015-01-09 | DEoptim | Global Optimization by Differential Evolution |

2015-01-09 | FastRCS | FastRCS Robust Fit of Multivariable Linear Regression Model |

2015-01-09 | HSAUR | A Handbook of Statistical Analyses Using R (1st Edition) |

2015-01-09 | HSAUR2 | A Handbook of Statistical Analyses Using R (2nd Edition) |

2015-01-09 | LSD | Lots of Superior Depictions |

2015-01-09 | MCDA | Functions to support the Multicriteria Decision Aiding process |

2015-01-09 | pvar | Calculation and Application of p-variation |

2015-01-09 | random | True Random Numbers using random.org |

2015-01-09 | randomizationInference | Flexible Randomization-Based Inference |

2015-01-09 | randomLCA | Random Effects Latent Class Analysis |

2015-01-09 | RBPcurve | The Residual-based Predictiveness Curve |

2015-01-09 | RcmdrPlugin.HH | Rcmdr support for the HH package |

2015-01-09 | RcppProgress | An Interruptible Progress Bar with OpenMP Support for C++ in R Packages |

2015-01-09 | RefManageR | Straightforward BibTeX and BibLaTeX Bibliography Management |

2015-01-09 | textometry | Textual Data Analysis Package used by the TXM Software |

2015-01-08 | acp | Autoregressive Conditional Poisson |

2015-01-08 | brnn | brnn (Bayesian regularization for feed-forward neural networks) |

2015-01-08 | epiR | Tools for the Analysis of Epidemiological Data |

2015-01-08 | FastHCS | FastHCS Robust Algortihm for Principal Component Analysis |

2015-01-08 | interferenceCI | Exact Confidence Intervals in the Presence of Interference |

2015-01-08 | io | A Unified Framework for Input-Output Operations in R |

2015-01-08 | ISOpureR | Deconvolution of Tumour Profiles |

2015-01-08 | noia | Implementation of the Natural and Orthogonal InterAction (NOIA) model |

2015-01-08 | radir | Inverse-Regression Estimation of Radioactive Doses |

2015-01-08 | ShrinkCovMat | Shrinkage Covariance Matrix Estimators |

2015-01-08 | SimCorMultRes | Simulates Correlated Multinomial Responses |

2015-01-08 | sra | Selection Response Analysis |

2015-01-08 | ssym | Fitting Semi-parametric Log-symmetric Regression Models |

2015-01-08 | statar | Tools inspired by Stata to manipulate tabular data |

2015-01-07 | BEQI2 | Benthic Ecosystem Quality Index 2 |

2015-01-07 | cudaBayesreg | CUDA Parallel Implementation of a Bayesian Multilevel Model for fMRI Data Analysis |

2015-01-07 | eaf | Plots of the Empirical Attainment Function |

2015-01-07 | FastPCS | FastPCS Robust Fit of Multivariate Location and Scatter |

2015-01-07 | gdimap | Generalized Diffusion Magnetic Resonance Imaging |

2015-01-07 | glpkAPI | R Interface to C API of GLPK |

2015-01-07 | gplots | Various R Programming Tools for Plotting Data |

2015-01-07 | MTurkR | R Client for the MTurk Requester API |

2015-01-07 | mwaved | Multichannel Wavelet Deconvolution with Additive Long Memory Noise |

2015-01-07 | openssl | Bindings to OpenSSL |

2015-01-07 | plotmo | Plot a Model's Response While Varying the Values of the Predictors |

2015-01-07 | QCAtools | Helper functions for QCA in R |

2015-01-07 | RGENERATEPREC | Tools To Generate Daily-Precipitation Time Series |

2015-01-07 | sfsmisc | Utilities from Seminar fuer Statistik ETH Zurich |

2015-01-07 | tikzDevice | R Graphics Output in LaTeX Format |

2015-01-07 | tsc | Likelihood-ratio Tests for Two-Sample Comparisons |

2015-01-06 | catR | Procedures to Generate Patterns under Computerized Adaptive Testing |

2015-01-06 | CEGO | Combinatorial Efficient Global Optimization |

2015-01-06 | cobs | COBS – COnstrained B-Splines (Sparse matrix based) |

2015-01-06 | DAMisc | Dave Armstrong's Miscellaneous Functions |

2015-01-06 | gWidgets2tcltk | Toolkit Implementation of gWidgets2 for tcltk |

2015-01-06 | medicalrisk | Medical Risk and Comorbidity Tools for ICD-9-CM Data |

2015-01-06 | mosaic | Project MOSAIC (mosaic-web.org) statistics and mathematics teaching utilities |

2015-01-06 | msm | Multi-state Markov and Hidden Markov Models in Continuous Time |

2015-01-06 | physiology | Calculate Physiological Characteristics of Adults and Children |

2015-01-06 | RcppCNPy | Read-Write Support for NumPy Files via Rcpp |

2015-01-06 | Rdsdp | R Interface to DSDP Semidefinite Programming Library |

2015-01-06 | RSiteCatalyst | R Client for Adobe Analytics API v1.4 |

2015-01-06 | RUnit | R Unit Test Framework |

2015-01-06 | strvalidator | Process Control And Internal Validation Of Forensic STR Kits |

2015-01-06 | surveillance | Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena |

2015-01-05 | BH | Boost C++ Header Files |

2015-01-05 | CorrBin | Nonparametrics with Clustered Binary and Multinomial Data |

2015-01-05 | cquad | Conditional ML for Quadratic Exponential Models for Binary Panel Data |

2015-01-05 | DistributionUtils | Distribution Utilities |

2015-01-05 | docopt | docopt, command-line interface specification language |

2015-01-05 | dplR | Dendrochronology Program Library in R |

2015-01-05 | EnsembleBase | Extensible Package for Parallel, Batch Training of Base Learners for Ensemble Modeling |

2015-01-05 | GeneralizedHyperbolic | The Generalized Hyperbolic Distribution |

2015-01-05 | glarma | Generalized Linear Autoregressive Moving Average Models |

2015-01-05 | hwriterPlus | hwriterPlus: Extending the hwriter Package |

2015-01-05 | moments | Moments, cumulants, skewness, kurtosis and related tests |

2015-01-05 | mritc | MRI Tissue Classification |

2015-01-05 | NormalLaplace | The Normal Laplace Distribution |

2015-01-05 | pooh | Partial Orders and Relations |

2015-01-05 | RadTran | Radon and Soil Gas Transport in 2D Porous Medium |

2015-01-05 | RGENERATE | Tools To Generate Vector Time Series |

2015-01-05 | SCEPtER | Stellar CharactEristics Pisa Estimation gRid |

2015-01-05 | sdwd | Sparse Distance Weighted Discrimination |

2015-01-05 | SkewHyperbolic | The Skew Hyperbolic Student t-Distribution |

2015-01-05 | SparseM | Sparse Linear Algebra |

2015-01-05 | tframe | Time Frame Coding Kernel |

2015-01-05 | TH.data | TH's Data Archive |

2015-01-05 | VarianceGamma | The Variance Gamma Distribution |

2015-01-04 | AnglerCreelSurveySimulation | Simulate a Bus Route Creel Survey of Anglers |

2015-01-04 | aprean3 | Datasets from Draper and Smith "Applied Regression Analysis" (3rd ed., 1998) |

2015-01-04 | ecp | Nonparametric Multiple Change-Point Analysis of Multivariate Data |

2015-01-04 | EntropyEstimation | Estimation of Entropy and Related Quantities |

2015-01-04 | gistr | Work with GitHub Gists |

2015-01-04 | intReg | Interval Regression |

2015-01-04 | jiebaR | Chinese Text Segmentation |

2015-01-04 | jiebaRD | Chinese Text Segmentation Data for jiebaR Package |

2015-01-04 | lifecontingencies | Financial and Actuarial Mathematics for Life Contingencies |

2015-01-04 | REdaS | Companion Package to the Book “R: Einführung durch angewandte Statistik” |

2015-01-04 | rgr | Applied Geochemistry EDA |

2015-01-04 | rUnemploymentData | Data and Functions for USA State and County Unemployment Data |

2015-01-04 | swirl | Learn R, in R |

2015-01-04 | ThreeArmedTrials | Design and Analysis of Clinical Non-inferiority or Superiority Trials with Active and Placebo Control |

2015-01-03 | caret | Classification and Regression Training |

2015-01-03 | glcm | Calculate textures from grey-level co-occurrence matrices (GLCMs) in R |

2015-01-03 | LDPD | Probability of Default Calibration |

2015-01-03 | partools | Tools for the 'Parallel' Package |

2015-01-03 | PivotalR | A Fast, Easy-to-use Tool for Manipulating Tables in Databases and A Wrapper of MADlib |

2015-01-02 | BNSP | Bayesian Non- and Semi-parametric Model Fitting |

2015-01-02 | cgdsr | R-Based API for accessing the MSKCC Cancer Genomics Data Server (CGDS) |

2015-01-02 | dropR | Analyze Drop Out of an Experiment or Survey |

2015-01-02 | ForImp | Imputation of Missing Values Through a Forward Imputation Algorithm |

2015-01-02 | lazyeval | Lazy (Non-Standard) Evaluation |

2015-01-02 | linkR | 3D Lever and Linkage Mechanism Modeling |

2015-01-02 | TreePar | Estimating birth and death rates based on phylogenies |

2015-01-01 | EnsembleCV | Extensible Package for Cross-Validation-Based Integration of Base Learners |

2015-01-01 | glrt | Generalized Logrank Tests for Interval-censored Failure Time Data |

2015-01-01 | granovaGG | Graphical Analysis of Variance Using ggplot2 |

2015-01-01 | httr | Tools for Working with URLs and HTTP |

2015-01-01 | msBP | Multiscale Bernstein Polynomials for Densities |

2015-01-01 | rvest | Easily Harvest (Scrape) Web Pages |

2015-01-01 | SRCS | Statistical Ranking Color Scheme for Multiple Pairwise Comparisons |

2015-01-01 | Storm | Write Storm Bolts in R using the Storm Multi-Language Protocol |

2014-12-31 | bibtex | bibtex parser |

2014-12-31 | blsAPI | Request Data From The U.S. Bureau of Labor Statistics API |

2014-12-31 | ca | Simple, Multiple and Joint Correspondence Analysis |

2014-12-31 | cg | The cg package to compare groups |

2014-12-31 | CNprep | Pre-process DNA Copy Number (CN) Data for Detection of CN Events |

2014-12-31 | digest | Create Cryptographic Hash Digests of R Objects |

2014-12-31 | digitalPCR | Estimate copy number for digital PCR |

2014-12-31 | maxLik | Maximum Likelihood Estimation |

2014-12-31 | Quor | Quantile Ordering |

2014-12-31 | RAMP | Regularized Generalized Linear Models with Interaction Effects |

2014-12-31 | spMC | Continuous-Lag Spatial Markov Chains |

2014-12-31 | swfscMisc | Miscellaneous Functions for Southwest Fisheries Science Center |

2014-12-31 | YaleToolkit | Data exploration tools from Yale University |

2014-12-30 | BCDating | Business Cycle Dating and Plotting Tools |

2014-12-30 | CORE | Cores of Recurrent Events |

2014-12-30 | ggmcmc | Graphical tools for analyzing Markov Chain Monte Carlo simulations from Bayesian inference |

2014-12-30 | MVar.pt | Analise Multivariada (Brazilian Portuguese) |

2014-12-30 | ParDNAcopy | Parallel implementation of the "segment" function of package "DNAcopy" |

2014-12-30 | rattle | Graphical user interface for data mining in R |

2014-12-30 | TBSSurvival | Survival Analysis using a Transform-Both-Sides model |

2014-12-29 | countrycode | Convert Country Names and Country Codes |

2014-12-29 | diffEq | Functions from the book Solving Differential Equations in R |

2014-12-29 | dupiR | Bayesian inference from count data using discrete uniform priors |

2014-12-29 | ecolMod | "A practical guide to ecological modelling - using R as a simulation platform" |

2014-12-29 | metabolomics | Analysis of Metabolomics Data |

2014-12-29 | R4CDISC | Read CDISC Data Files |

2014-12-29 | raters | A Modification of Fleiss' Kappa in Case of Nominal and Ordinal Variables |

2014-12-29 | selectiongain | A tool for calculation and optimization of the expected gain from multi-stage selection |

2014-12-29 | tableone | Create "Table 1" to describe baseline characteristics |

2014-12-29 | TBEST | Tree Branches Evaluated Statistically for Tightness |

2014-12-29 | usl | Analyze System Scalability with the Universal Scalability Law |

2014-12-28 | aRxiv | Interface to the arXiv API |

2014-12-28 | BNDataGenerator | Data Generator based on Bayesian Network Model |

2014-12-28 | lm.beta | Add Standardized Regression Coefficients to lm-Objects |

2014-12-28 | plfm | Probabilistic Feature Analysis of Two-Way Two-Mode Frequencies |

2014-12-28 | rmngb | Miscellaneous Collection of Functions for Medical Data Analysis |

2014-12-28 | rneos | rneos: XML-RPC Interface to NEOS |

2014-12-28 | svgViewR | 3D Animated Interactive Visualizations using SVG |

2014-12-27 | extraTrees | Extremely Randomized Trees (ExtraTrees) Method for Classification and Regression |

2014-12-27 | myTAI | A Framework to Perform Phylotranscriptomics Analyses for Evolutionary Developmental Biology Research |

2014-12-26 | cjoint | AMCE Estimator for Conjoint Experiments |

2014-12-26 | LIM | Linear Inverse Model examples and solution methods |

2014-12-26 | MfUSampler | Multivariate-from-Univariate (MfU) MCMC Sampler |

2014-12-26 | NetIndices | Estimating network indices, including trophic structure of foodwebs in R |

2014-12-26 | RConics | Computations on Conics |

2014-12-26 | ReacTran | Reactive transport modelling in 1D, 2D and 3D |

2014-12-26 | RNeXML | Implement semantically rich I/O for the NeXML format |

2014-12-26 | Statomica | Statomica utility package |

2014-12-26 | wskm | Weighted k-means Clustering |

2014-12-25 | plsgenomics | PLS analyses for genomics |

2014-12-25 | uniftest | Tests for Uniformity |

2014-12-24 | additivityTests | Additivity Tests in the Two Way Anova with Single Sub-class Numbers |

2014-12-24 | AFLPsim | Hybrid simulation and genome scan for dominant markers |

2014-12-24 | BayClone2 | Bayesian Feature Allocation Model for Tumor Heterogeneity |

2014-12-24 | gender | Predict Gender from Names Using Historical Data |

2014-12-24 | historydata | Data Sets for Historians |

2014-12-24 | ismev | An Introduction to Statistical Modeling of Extreme Values |

2014-12-24 | manipulate | Interactive Plots for RStudio |

2014-12-24 | multibiplotGUI | Multibiplot Analysis in R |

2014-12-24 | OutlierDM | Outlier Detection for Multi-replicated High-throughput Data |

2014-12-24 | OutrankingTools | Functions for Solving Multiple-criteria Decision-making Problems |

2014-12-24 | pbdSLAP | Programming with Big Data – Scalable Linear Algebra Packages |

2014-12-24 | protr | Generating Various Numerical Representation Schemes of Protein Sequence |

2014-12-24 | selectr | Translate CSS Selectors to XPath Expressions |

2014-12-24 | SharpeR | Statistical Significance of the Sharpe Ratio |

2014-12-24 | SpatialVx | Spatial Forecast Verification |

2014-12-24 | USAboundaries | Historical Boundaries of the United States of America, 1629-2000 |

2014-12-24 | verification | Weather Forecast Verification Utilities |

2014-12-23 | GLDEX | Fitting Single and Mixture of Generalised Lambda Distributions (RS and FMKL) using Various Methods |

2014-12-23 | KrigInv | Kriging-based Inversion for Deterministic and Noisy Computer Experiments |

2014-12-23 | reconstructr | Session Reconstruction and Analysis |

2014-12-23 | StratSel | Strategic Selection Estimator |

2014-12-23 | TDA | Statistical Tools for Topological Data Analysis |

2014-12-23 | urltools | Vectorised Tools for URL Handling and Parsing |

2014-12-22 | abn | Data Modelling with Additive Bayesian Networks |

2014-12-22 | convevol | Quantifies and assesses the significance of convergent evolution |

2014-12-22 | depmix | Dependent Mixture Models |

2014-12-22 | diveRsity | A Comprehensive, General Purpose Population Genetics Analysis Package |

2014-12-22 | gets | General-to-Specific (GETS) Modelling and Indicator Saturation Methods |

2014-12-22 | graphicsQC | Quality Control for Graphics in R |

2014-12-22 | helsinki | Helsinki Open Data R Tools |

2014-12-22 | hydrostats | Hydrologic indices for daily time series data |

2014-12-22 | MAd | Meta-Analysis with Mean Differences |

2014-12-22 | mhsmm | Inference for Hidden Markov and Semi-Markov Models |

2014-12-22 | MPDiR | Data sets and scripts for Modeling Psychophysical Data in R |

2014-12-22 | pvclust | Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling |

2014-12-22 | qdapTools | Tools for the qdap Package |

2014-12-22 | RSNNS | Neural Networks in R using the Stuttgart Neural Network Simulator (SNNS) |

2014-12-21 | adabag | Applies Multiclass AdaBoost.M1, SAMME and Bagging |

2014-12-21 | aplore3 | Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic Regression" (3rd ed.) |

2014-12-21 | berryFunctions | Function Collection related to Plotting and Hydrology |

2014-12-21 | breakpoint | Multiple Break-Point Detection via the Cross-Entropy Method |

2014-12-21 | OPI | Open Perimetry Interface |

2014-12-21 | powerGWASinteraction | Power Calculations for GxE and GxG Interactions for GWAS |

2014-12-21 | PredictABEL | Assessment of Risk Prediction Models |

2014-12-21 | qmrparser | Parser combinator in R |

2014-12-21 | reports | Assist the Workflow of Writing Academic Articles and Other Reports |

2014-12-21 | rgl | 3D visualization device system (OpenGL) |

2014-12-21 | spfrontier | Spatial Stochastic Frontier models estimation |

2014-12-20 | colourlovers | R client for the COLOURlovers API |

2014-12-20 | ddalpha | Depth-based Classification and Calculation of Data Depth |

2014-12-20 | doMPI | Foreach parallel adaptor for the Rmpi package |

2014-12-20 | NORTARA | Generation of Multivariate Data with Arbitrary Marginals |

2014-12-20 | npcp | Some nonparametric tests for change-point detection in (multivariate) observations |

2014-12-20 | orgR | Analyse Text Files Created by Emacs' Org mode |

2014-12-20 | pse | Parameter space exploration with Latin Hypercubes |

2014-12-20 | RMAWGEN | Multi-site Auto-regressive Weather GENerator |

2014-12-20 | rnoaa | NOAA Climate Data from R |

2014-12-20 | RPublica | ProPublica API Client |

2014-12-20 | SCEPtERbinary | Stellar CharactEristics Pisa Estimation gRid for Binary Systems |

2014-12-20 | skmeans | Spherical k-Means Clustering |

2014-12-20 | splm | Econometric Models for Spatial Panel Data |

2014-12-20 | svDialogs | SciViews GUI API - Dialog boxes |

2014-12-20 | tcltk2 | Tcl/Tk Additions |

2014-12-20 | testit | A Simple Package for Testing R Packages |

2014-12-19 | bgmm | Gaussian Mixture Modeling Algorithms And The Belief-based Mixture Modeling |

2014-12-19 | cghseg | Segmentation methods for array CGH analysis |

2014-12-19 | geonames | Interface to www.geonames.org web service |

2014-12-19 | GPLTR | Generalized Partially Linear Tree-based Regression Model |

2014-12-19 | lpme | Local Polynomial Estimator in Measurement Error Models |

2014-12-19 | penalized | L1 (lasso and fused lasso) and L2 (ridge) penalized estimation in GLMs and in the Cox model |

2014-12-19 | RJDBC | Provides access to databases through the JDBC interface |

2014-12-19 | sBF | Smooth Backfitting |

2014-12-19 | spanr | Search Partition Analysis |

2014-12-19 | spBayesSurv | Bayesian Modeling and Analysis of Spatially Correlated Survival Data |

2014-12-19 | srd | Draws Scaled Rectangle Diagrams |

2014-12-19 | streamMOA | stream - Interface to MOA Algorithms |

2014-12-19 | taxize | Taxonomic Information from Around the Web |

2014-12-18 | crs | Categorical Regression Splines |

2014-12-18 | DCGL | Differential Co-expression Analysis and Differential Regulation Analysis of Gene Expression Microarray Data |

2014-12-18 | GPC | Generalized Polynomial Chaos |

2014-12-18 | IsoGene | Order-Restricted Inference for Microarray Experiments |

2014-12-18 | multiband | Period Estimation for Multiple Bands |

2014-12-18 | mvtnorm | Multivariate Normal and t Distributions |

2014-12-18 | REDCapR | Interaction between R and REDCap |

2014-12-18 | RnavGraph | Using Graphs as a Navigational Infrastructure |

2014-12-18 | RoughSetKnowledgeReduction | Simplification of Decision Tables using Rough Sets |

2014-12-18 | selfingTree | Genotype Probabilities in Intermediate Generations of Inbreeding Through Selfing |

2014-12-18 | sprinter | Framework for Screening Prognostic Interactions |

2014-12-17 | amap | Another Multidimensional Analysis Package |

2014-12-17 | daewr | Design and Analysis of Experiments with R |

2014-12-17 | db.r | A Database Exploration Tool with Assisted Querying and Schema Exploration |

2014-12-17 | EasyABC | Efficient Approximate Bayesian Computation Sampling Schemes |

2014-12-17 | eha | Event History Analysis |

2014-12-17 | FPDclustering | PD-Clustering and Factor PD-Clustering |

2014-12-17 | GPareto | Gaussian Processes for Pareto Front Estimation and Optimization |

2014-12-17 | hexView | Viewing Binary Files |

2014-12-17 | influence.ME | Tools for Detecting Influential Data in Mixed Effects Models |

2014-12-17 | lmmot | Multiple Ordinal Tobit (MOT) model |

2014-12-17 | lqmm | Linear Quantile Mixed Models |

2014-12-17 | nullabor | Tools for Graphical Inference |

2014-12-17 | plotpc | Plot principal component histograms around a scatter plot |

2014-12-17 | plsRbeta | Partial Least Squares Regression for Beta Regression Models |

2014-12-17 | plsRcox | Partial Least Squares Regression for Cox Models and Related Techniques |

2014-12-17 | plsRglm | Partial Least Squares Regression for Generalized Linear Models |

2014-12-17 | Rchoice | Discrete Choice (Binary, Poisson and Ordered) Models with Random Parameters |

2014-12-17 | RcmdrPlugin.RMTCJags | R MTC Jags Rcmdr Plugin |

2014-12-17 | RcppDL | Deep Learning Methods via Rcpp |

2014-12-17 | refset | Subsets with Reference Semantics |

2014-12-17 | rioja | Analysis of Quaternary Science Data |

2014-12-17 | rmatio | Read and Write Matlab Files |

2014-12-17 | rSFA | Slow Feature Analysis in R |

2014-12-17 | seqinr | Biological Sequences Retrieval and Analysis |

2014-12-17 | soil.spec | Soil Spectroscopy Tools and Reference Models |

2014-12-17 | stpp | Space-Time Point Pattern simulation, visualisation and analysis |

2014-12-16 | abctools | Tools for ABC analyses |

2014-12-16 | actuar | Actuarial functions |

2014-12-16 | compare | Comparing Objects for Differences |

2014-12-16 | dti | Analysis of diffusion weighted imaging (DWI) data |

2014-12-16 | epinet | A Collection of Epidemic/Network-Related Tools |

2014-12-16 | fda | Functional Data Analysis |

2014-12-16 | FinancialInstrument | Financial Instrument Model Infrastructure for R |

2014-12-16 | gimme | Group Iterative Multiple Model Estimation |

2014-12-16 | GrammR | Graphical Representation and Modeling of Metagenomic Reads |

2014-12-16 | leaderCluster | Leader Clustering Algorithm |

2014-12-16 | Morpho | Calculations and visualisations related to Geometric Morphometrics |

2014-12-16 | PHeval | Evaluation of the proportional hazards assumption with a standardized score process |

2014-12-16 | readBrukerFlexData | Reads Mass Spectrometry Data in Bruker *flex Format |

2014-12-16 | RECA | Relevant Component Analysis for Supervised Distance Metric Learning |

2014-12-16 | rotations | Tools for Working with Rotation Data |

2014-12-16 | sdnet | Soft Discretization-based Bayesian Network Inference |

2014-12-16 | season | Seasonal analysis of health data |

2014-12-16 | spca | Sparse Principal Component Analysis |

2014-12-16 | tdm | Data Analysis for Therapeutic Drug Monitoring |

2014-12-16 | WaveletComp | Computational Wavelet Analysis |

2014-12-15 | Peptides | Calculate Indices and Theoretical Properties of Protein Sequences |

2014-12-15 | Taxonstand | Taxonomic Standardization of Plant Species Names |

2014-12-15 | tergm | Fit, Simulate and Diagnose Models for Network Evolution based on Exponential-Family Random Graph Models |

2014-12-15 | wildlifeDI | Calculate Indices of Dynamic Interaction for Wildlife Telemetry Data |

2014-12-15 | xkcd | Plotting ggplot2 graphics in an XKCD style |

2014-12-14 | EBglmnet | Empirical Bayesian Lasso and Elastic Net Methods for Generalized Linear Models |

2014-12-14 | ergm | Fit, Simulate and Diagnose Exponential-Family Models for Networks |

2014-12-14 | logconPH | CoxPH Model with Log Concave Baseline Distribution |

2014-12-14 | qqtest | Quantile Quantile Plots Self Calibrating For Visual Testing |

2014-12-14 | rodd | Optimal Discriminating Designs |

2014-12-14 | stringi | Character String Processing Facilities |

2014-12-14 | varSelRF | Variable Selection using Random Forests |

2014-12-13 | blowtorch | Constrained Optimization Via Stochastic Gradient Descent |

2014-12-13 | boral | Bayesian Ordination and Regression AnaLysis |

2014-12-13 | rgpui | UI for the RGP genetic programming framework |

2014-12-13 | Rmosek | The R-to-MOSEK Optimization Interface |

2014-12-13 | Vdgraph | Variance dispersion graphs and Fraction of design space plots for response surface designs |

2014-12-12 | DPw | Semi- and nonparametric Bayesian Subset Selection Procedures |

2014-12-12 | DSpat | Spatial Modelling for Distance Sampling Data |

2014-12-12 | rnbn | Access NBN Data |

2014-12-12 | subrank | Computes copula using ranks and subsampling |

2014-12-11 | c060 | Extended Inference for Lasso and Elastic-Net Regularized Cox and Generalized Linear Models |

2014-12-11 | clusterCrit | Clustering Indices |

2014-12-11 | doBy | Groupwise statistics, LSmeans, linear contrasts, utilities |

2014-12-11 | EffectTreat | Prediction of Therapeutic Success |

2014-12-11 | enigma | R Client for the Enigma API |

2014-12-11 | optparse | Command line option parser |

2014-12-11 | phreeqc | R interface to Geochemical Modeling Software |

2014-12-11 | RJaCGH | Reversible Jump MCMC for the analysis of CGH arrays |

2014-12-11 | rpf | Response Probability Functions |

2014-12-11 | RProtoBuf | R Interface to the Protocol Buffers API |

2014-12-11 | stab | Data Analysis for Drug Stability |

2014-12-11 | TIMP | Fitting Separable Nonlinear Models in Spectroscopy and Microscopy |

2014-12-10 | biomod2 | Ensemble platform for species distribution modeling |

2014-12-10 | bnormnlr | Bayesian Estimation for Normal Heteroscedastic Nonlinear Regression Models |

2014-12-10 | coefficientalpha | Robust Cronbach's Alpha and Mcdonald's Omega with Missing and Non-normal Data |

2014-12-10 | dae | Functions Useful in the Design and ANOVA of Experiments |

2014-12-10 | dbstats | Distance-Based Statistics |

2014-12-10 | DnE | Distribution and Equation |

2014-12-10 | dynBiplotGUI | Full Interactive GUI for Dynamic Biplot in R |

2014-12-10 | effects | Effect Displays for Linear, Generalized Linear, and Other Models |

2014-12-10 | filenamer | Easy Management of File Names |

2014-12-10 | gsalib | Utility Functions For GATK |

2014-12-10 | MapGAM | Mapping Smoothed Effect Estimates from Individual-Level Data |

2014-12-10 | pawacc | Physical activity with accelerometers |

2014-12-10 | prodlim | Product-limit estimation for censored event history analysis |

2014-12-10 | RAM | R for Amplicon-based Metagenomics |

2014-12-10 | rbison | R Interface to the USGS BISON API |

2014-12-10 | RcppRedis | Rcpp bindings for Redis using the hiredis library |

2014-12-10 | riskRegression | Risk regression models for survival analysis with competing risks |

2014-12-10 | snplist | Tools to create Gene Sets |

2014-12-10 | spiders | Fits predator preferences model |

2014-12-10 | sprm | Sparse and Non-Sparse Partial Robust M Regression |

2014-12-10 | TPmsm | Estimation of Transition Probabilities in Multistate Models |

2014-12-10 | vitality | Fitting Routines for the Vitality Family of Mortality Models |

2014-12-09 | accelerometry | Functions for Processing Minute-to-Minute Accelerometer Data |

2014-12-09 | apcluster | Affinity Propagation Clustering |

2014-12-09 | bear | Data Analysis Tool for Average Bioequivalence and Bioavailability |

2014-12-09 | complmrob | Robust Linear Regression with Compositional Data as Covariates |

2014-12-09 | Cprob | Conditional probability function of a competing event |

2014-12-09 | cvAUC | Cross-Validated Area Under the ROC Curve Confidence Intervals |

2014-12-09 | etm | Empirical Transition Matrix |

2014-12-09 | GeneticSubsetter | Identify Favorable Subsets of Germplasm Collections |

2014-12-09 | growfunctions | Bayesian non-parametric dependent models for time-indexed functional data |

2014-12-09 | htmlwidgets | HTML Widgets for R |

2014-12-09 | iFes | Incremental Feature Selection Algorithm accelerated by GPU |

2014-12-09 | intsvy | International Assessment Data Manager |

2014-12-09 | isopam | Isopam (Clustering) |

2014-12-09 | localgauss | Estimating Local Gaussian Parameters |

2014-12-09 | MRSP | Multinomial Response Models with Structured Penalties |

2014-12-09 | normalp | Routines for Exponential Power Distribution |

2014-12-09 | NPMLEcmprsk | Type-specific Failure Rate and Hazard Rate on Competing Risks Data |

2014-12-09 | RDataCanvas | Basic Runtime Support for Datacanvas.io |

2014-12-09 | rzmq | R Bindings for ZeroMQ |

2014-12-09 | smnet | Smoothing For Stream Network Data |

2014-12-09 | spgwr | Geographically weighted regression |

2014-12-09 | statnet.common | Common R Scripts and Utilities Used by the Statnet Project Software |

2014-12-08 | arules | Mining Association Rules and Frequent Itemsets |

2014-12-08 | arulesViz | Visualizing Association Rules and Frequent Itemsets |

2014-12-08 | bdynsys | Bayesian Dynamical System Model |

2014-12-08 | BerlinData | Easy access to Berlin related data |

2014-12-08 | breakage | SICM pipette tip geometry estimation |

2014-12-08 | ccda | Combined Cluster and Discriminant Analysis |

2014-12-08 | extrafont | Tools for using fonts |

2014-12-08 | far | Modelization for Functional AutoRegressive processes |

2014-12-08 | fSRM | Social Relations Analyses With Roles ("Family SRM") |

2014-12-08 | iC10 | A copy number and expression-based classifier for breast tumours |

2014-12-08 | MetSizeR | GUI Tool for Estimating Sample Sizes for Metabolomic Experiments |

2014-12-08 | optiRum | Miscellaneous functions for (primarily) finance / credit risk analysts |

2014-12-08 | rbounds | Perform Rosenbaum bounds sensitivity tests for matched and unmatched data |

2014-12-08 | rJPSGCS | R-interface to Gene Drop Simulation from JPSGCS |

2014-12-08 | RSurveillance | Design and Analysis of Disease Surveillance Activities |

2014-12-08 | seqminer | Efficiently Read Sequence Data (VCF format, BCF format and METAL format) into R |

2014-12-08 | SPmlficmcm | Semiparametric Maximum Likelihood for Mother-Child Designs |

2014-12-08 | tgp | Bayesian treed Gaussian process models |

2014-12-08 | thermocouple | Temperature Measurement with Thermocouples, RTD and IC Sensors |

2014-12-08 | timetools | Seasonal/Sequential (Instants/Durations, Even or not) Time Series |

2014-12-07 | BayesianAnimalTracker | Bayesian Melding of GPS and DR Path for Animal Tracking |

2014-12-07 | Boruta | Wrapper Algorithm for All-Relevant Feature Selection |

2014-12-07 | dashboard | Interactive Data Visualization with D3.js |

2014-12-07 | metasens | Advanced Statistical Methods to Model and Adjust for Bias in Meta-Analysis |

2014-12-07 | networkDynamic | Dynamic Extensions for Network Objects |

2014-12-07 | RColorBrewer | ColorBrewer Palettes |

2014-12-07 | rtdists | Response time distributions |

2014-12-07 | tempdisagg | Methods for Temporal Disaggregation and Interpolation of Time Series |

2014-12-06 | agrmt | Calculate Agreement or Consensus in Ordered Rating Scales |

2014-12-06 | algstat | Algebraic statistics in R |

2014-12-06 | chngpt | Change Point Logistic Regression |

2014-12-06 | CITAN | CITation ANalysis Toolpack |

2014-12-06 | gss | General Smoothing Splines |

2014-12-06 | gsscopu | Copula Density and 2-D Hazard Estimation using Smoothing Splines |

2014-12-06 | NISTunits | Fundamental Physical Constants and Unit Conversions from NIST |

2014-12-06 | performanceEstimation | An Infra-Structure for Performance Estimation of Predictive Models |

2014-12-06 | Rcgmin | Conjugate Gradient Minimization of Nonlinear Functions |

2014-12-06 | reshape2 | Flexibly Reshape Data: A Reboot of the Reshape Package |

2014-12-06 | Rvmmin | Variable Metric Nonlinear Function Minimization |

2014-12-06 | WikipediR | A MediaWiki API wrapper |

2014-12-05 | acid | Analysing Conditional Distributions of Income |

2014-12-05 | ape | Analyses of Phylogenetics and Evolution |

2014-12-05 | archiDART | Plant Root System Architecture Analysis Using DART Output Files |

2014-12-05 | ars | Adaptive Rejection Sampling |

2014-12-05 | BLR | Bayesian Linear Regression |

2014-12-05 | bsts | Bayesian Structural Time Series |

2014-12-05 | crqa | Cross-Recurrence Quantification Analysis for Categorical and Continuous Time-Series |

2014-12-05 | gettingtothebottom | Learning Optimization and Machine Learning for Statistics |

2014-12-05 | gumbel | Gumbel Copula |

2014-12-05 | nlmrt | Functions for Nonlinear Least Squares Solutions |

2014-12-05 | okmesonet | Retrieve Oklahoma Mesonet climatological data |

2014-12-05 | optextras | Tools to Support Optimization Methods |

2014-12-05 | PCAmixdata | Multivariate Analysis of Mixed Data |

2014-12-05 | pec | Prediction Error Curves for risk prediction models in survival analysis |

2014-12-05 | popReconstruct | Reconstruct Human Populations of the Recent Past |

2014-12-05 | randtoolbox | Toolbox for Pseudo and Quasi Random Number Generation and RNG Tests |

2014-12-05 | rhosp | Side Effect Risks in Hospital : Simulation and Estimation |

2014-12-05 | robfilter | Robust Time Series Filters |

2014-12-05 | spectralGP | Approximate Gaussian processes Using the Fourier Basis |

2014-12-05 | tidyr | Easily Tidy Data with spread() and gather() Functions |

2014-12-05 | tlm | Effects under Linear, Logistic and Poisson Regression Models with Transformed Variables |

2014-12-05 | tourr | Implement Tour Methods in R Code |

2014-12-04 | BEDASSLE | Quantifies effects of geo/eco distance on genetic differentiation |

2014-12-04 | BoomSpikeSlab | MCMC for Spike and Slab Regression |

2014-12-04 | dcGOR | Analysis of ontologies and protein domain annotations |

2014-12-04 | Delaporte | Statistical Functions for the Delaporte Distribution |

2014-12-04 | extWeibQuant | Estimate Lower Extreme Quantile with the Censored Weibull MLE and Censored Weibull Mixture |

2014-12-04 | gmailr | Access the Gmail RESTful API |

2014-12-04 | GoFKernel | Testing Goodness-of-fit with the Kernel Density Estimator |

2014-12-04 | HGNChelper | Handy Functions for Working With HGNC Gene Symbols and Affymetrix Probeset Identifiers |

2014-12-04 | HSSVD | Biclustering with Heterogeneous Variance |

2014-12-04 | LeafAngle | Analysis and Visualization of Plant Leaf Angle Distributions |

2014-12-04 | MasterBayes | ML and MCMC Methods for Pedigree Reconstruction and Analysis |

2014-12-04 | nonnest2 | Tests of Non-nested Models |

2014-12-04 | NPS | Convenience Functions and Tests for Working With the Net Promoter Score (NPS) |

2014-12-04 | rAltmetric | Retrieves Altmerics Data For Any Published Paper From Altmetric.com |

2014-12-04 | RStars | Access to the Digital Universe Data set API |

2014-12-04 | sensitivityPStrat | Principal Stratification Sensitivity Analysis Functions |

2014-12-04 | spcr | Sparse principal component regression |

2014-12-04 | spikeSlabGAM | Bayesian variable selection and model choice for generalized additive mixed models |

2014-12-04 | stratification | Univariate Stratification of Survey Populations |

2014-12-03 | Boom | Bayesian Object Oriented Modeling |

2014-12-03 | ClimClass | Climate Classification According To Several Indices |

2014-12-03 | deTestSet | Testset for differential equations |

2014-12-03 | extremevalues | Univariate outlier detection |

2014-12-03 | genMOSS | Functions for the Bayesian Analysis of GWAS Data |

2014-12-03 | NPCD | Nonparametric Methods for Cognitive Diagnosis |

2014-12-03 | panelaggregation | Aggregate Longitudinal Survey Data |

2014-12-03 | pdR | threshold regression and unit root test in panel data |

2014-12-03 | rngSetSeed | Seeding the Default RNG with a Numeric Vector |

2014-12-03 | sequences | Generic and Biological Sequences |

2014-12-03 | seriation | Infrastructure for seriation |

2014-12-03 | smaa | Stochastic Multi-criteria Acceptability Analysis |

2014-12-03 | tigerstats | R for Elementary Statistics |

2014-12-03 | WRS2 | Wilcox Robust Estimation and Testing |

2014-12-03 | YplantQMC | Plant Architectural Analysis with Yplant and QuasiMC |

2014-12-02 | ARTool | Aligned Rank Transform |

2014-12-02 | choroplethrAdmin1 | Contains an Administrative-Level-1 Map of the World |

2014-12-02 | DOBAD | Analysis of Discretely Observed linear Birth-And-Death(-and-immigration) Markov Chains |

2014-12-02 | FLIM | Farewell’s Linear Increments Model |

2014-12-02 | gamboostMSM | Estimating multistate models using gamboost() |

2014-12-02 | GGally | Extension to ggplot2 |

2014-12-02 | hnp | Half-Normal Plots with Simulation Envelopes |

2014-12-02 | MOrder | Check Time Homogeneity and Markov Chain Order |

2014-12-02 | MPSEM | Modeling Phylogenetic Signals using Eigenvector Maps |

2014-12-02 | pedometrics | Pedometric Tools and Techniques |

2014-12-02 | plgp | Particle Learning of Gaussian Processes |

2014-12-02 | radar | Fundamental Formulas for Radar |

2014-12-02 | RPANDA | Phylogenetic ANalyses of DiversificAtion |

2014-12-02 | RQuantLib | R Interface to the QuantLib Library |

2014-12-02 | rrcov | Scalable Robust Estimators with High Breakdown Point |

2014-12-02 | rrcovHD | Robust multivariate Methods for High Dimensional Data |

2014-12-02 | rrcovNA | Scalable Robust Estimators with High Breakdown Point for Incomplete Data |

2014-12-02 | turfR | TURF Analysis for R |

2014-12-02 | VAR.etp | VAR modelling: estimation, testing, and prediction |

2014-12-02 | wrassp | Interface to the ASSP Library |

2014-12-02 | yaImpute | yaImpute: An R Package for k-NN Imputation |

2014-12-01 | fda.usc | Functional Data Analysis and Utilities for Statistical Computing |

2014-12-01 | GCPM | Generalized Credit Portfolio Model |

2014-12-01 | kriging | Ordinary Kriging |

2014-12-01 | lintr | Static R Code Analysis |

2014-12-01 | MindOnStats | Data sets included in Utts and Heckard's Mind on Statistics |

2014-12-01 | occ | Estimates PET neuroreceptor occupancies |

2014-12-01 | ssd | Sample Size Determination (SSD) for Unordered Categorical Data |

2014-11-30 | dr | Methods for dimension reduction for regression |

2014-11-30 | rFerns | Random ferns classifier |

2014-11-30 | rngwell19937 | Random number generator WELL19937a with 53 or 32 bit output |

2014-11-29 | enviPick | Peak picking for high resolution mass spectrometry data |

2014-11-29 | list | Statistical Methods for the Item Count Technique and List Experiment |

2014-11-29 | Lmoments | L-moments and quantile mixtures |

2014-11-29 | matrixpls | Matrix-based Partial Least Squares estimation |

2014-11-29 | mco | Multiple Criteria Optimization Algorithms and Related Functions |

2014-11-29 | rainfreq | Rainfall Frequency (Design Storm) Estimates from the US National Weather Service |

2014-11-29 | revealedPrefs | Revealed Preferences and Microeconomic Rationality |

2014-11-29 | simrel | Linear Model Data Simulation and Design of Computer Experiments |

2014-11-28 | EnsemblePCReg | Extensible Package for Principal-Component-Regression-based Integration of Base Learners |

2014-11-28 | EnsemblePenReg | Extensible Classes and Methods for Penalized-Regression-based Integration of Base Learners |

2014-11-28 | highfrequency | Tools For Highfrequency Data Analysis |

2014-11-28 | MAVIS | Meta Analysis via Shiny |

2014-11-28 | Unicode | Unicode Data and Utilities |

2014-11-27 | apt | Asymmetric Price Transmission (apt) |

2014-11-27 | CINOEDV | Co-Information based N-Order Epistasis Detector and Visualizer |

2014-11-27 | cmprskQR | Analysis of Competing Risks Using Quantile Regressions |

2014-11-27 | DECIDE | DEComposition of Indirect and Direct Effects |

2014-11-27 | erer | Empirical Research in Economics with R |

2014-11-27 | fcros | FCROS to search for differentially expressed genes and to detect recurrent chromosomal copy number aberrations |

2014-11-27 | genpathmox | Generalized PATHMOX Algorithm for PLS-PM, LS and LAD Regression |

2014-11-27 | miRtest | combined miRNA- and mRNA-testing |

2014-11-27 | orderedLasso | Ordered Lasso and Time-lag Sparse Regression |

2014-11-27 | rags2ridges | Ridge Estimation of Precision Matrices from High-Dimensional Data |

2014-11-27 | Rmpfr | R MPFR - Multiple Precision Floating-Point Reliable |

2014-11-27 | SSrat | Two-dimensional sociometric status determination with rating scales |

2014-11-27 | superbiclust | Generating Robust Biclusters from a Bicluster Set (Ensemble Biclustering) |

2014-11-26 | aspect | Aspects of Multivariables |

2014-11-26 | EstSimPDMP | Estimation and Simulation for PDMPs |

2014-11-26 | GMDH | Predicting and Forecasting Time Series via GMDH-Type Neural Network Algorithms |

2014-11-26 | gWidgetsRGtk2 | Toolkit implementation of gWidgets for RGtk2 |

2014-11-26 | hierarchicalDS | Functions For Performing Hierarchical Analysis of Distance Sampling Data |

2014-11-26 | irace | Iterated Racing Procedures |

2014-11-26 | jaatha | A Fast Parameter Estimation Method for Evolutionary Biology |

2014-11-26 | knitcitations | Citations for knitr markdown files |

2014-11-26 | kpodclustr | Method for Clustering Partially Observed Data |

2014-11-26 | MCPMod | Design and Analysis of Dose-Finding Studies (see also DoseFinding package) |

2014-11-26 | mixPHM | Mixtures of proportional hazard models |

2014-11-26 | moduleColor | Basic Module Functions |

2014-11-26 | NHMM | Bayesian NHMM Modeling (Multiple Time Series) |

2014-11-26 | pointdensityP | Point density for geospatial data |

2014-11-26 | RaschSampler | Rasch Sampler |

2014-11-26 | RcmdrPlugin.EZR | R Commander Plug-in for the EZR (Easy R) Package |

2014-11-26 | rex | Friendly Regular Expressions |

2014-11-26 | rowr | Row-based functions for R objects |

2014-11-26 | rspa | Adapt Numerical Records To Fit (In)Equality Restrictions |

2014-11-26 | SunterSampling | Sunter's sampling design |

2014-11-25 | acss | Algorithmic Complexity for Short Strings |

2014-11-25 | bipartite | Visualising bipartite networks and calculating some (ecological) indices |

2014-11-25 | dataframes2xls | dataframes2xls writes data frames to xls files |

2014-11-25 | diptest | Hartigan's dip test statistic for unimodality - corrected code |

2014-11-25 | DiscreteInverseWeibull | Discrete inverse Weibull distribution |

2014-11-25 | distrMod | Object Oriented Implementation of Probability Models |

2014-11-25 | dse | Dynamic Systems Estimation (time series package) |

2014-11-25 | dslice | Dynamic slicing |

2014-11-25 | GPArotation | GPA Factor Rotation |

2014-11-25 | gsarima | Two functions for Generalized SARIMA time series simulation |

2014-11-25 | iccbeta | Multilevel model intraclass correlation for slope heterogeneity |

2014-11-25 | IRTShiny | Item Response Theory via Shiny |

2014-11-25 | Julia | Fractal Image Data Generator |

2014-11-25 | kinfit | Routines for fitting kinetic models to chemical degradation data |

2014-11-25 | KODAMA | Knowledge discovery by accuracy maximization |

2014-11-25 | maboost | Binary and Multiclass Boosting Algorithms |

2014-11-25 | mistral | Methods in Structural Reliability |

2014-11-25 | multilevelPSA | Multilevel Propensity Score Analysis |

2014-11-25 | musicNMR | Conversion of Nuclear Magnetic Resonance spectrum in audio file |

2014-11-25 | R0 | Estimation of R0 and real-time reproduction number from epidemics |

2014-11-25 | rstiefel | Random orthonormal matrix generation on the Stiefel manifold |

2014-11-25 | setRNG | Set (Normal) Random Number Generator and Seed |

2014-11-25 | SMR | Externally Studentized Midrange Distribution |

2014-11-25 | soma | General-Purpose Optimisation With the Self-Organising Migrating Algorithm |

2014-11-25 | StressStrength | Computation and estimation of reliability of stress-strength models |

2014-11-25 | SweaveListingUtils | Utilities for Sweave together with TeX listings package |

2014-11-25 | synbreed | Framework for the analysis of genomic prediction data using R |

2014-11-24 | acepack | ace() and avas() for selecting regression transformations |

2014-11-24 | Bergm | Bayesian analysis for exponential random graph models |

2014-11-24 | choiceDes | Design Functions for Choice Studies |

2014-11-24 | choplump | Choplump tests |

2014-11-24 | genridge | Generalized Ridge Trace Plots for Ridge Regression |

2014-11-24 | metafor | Meta-Analysis Package for R |

2014-11-24 | missMDA | Handling missing values with/in multivariate data analysis (principal component methods) |

2014-11-24 | paleobioDB | Download and Process Data from the Paleobiology Database |

2014-11-24 | pvclass | P-values for Classification |

2014-11-24 | RCMIP5 | Tools for Manipulating and Summarizing CMIP5 Data |

2014-11-24 | rdatamarket | Data access API for DataMarket.com |

2014-11-24 | RNCEP | Obtain, Organize, and Visualize NCEP Weather Data |

2014-11-24 | Rsolnp | General Non-linear Optimization |

2014-11-24 | sgr | Sample Generation by Replacement |

2014-11-24 | SimRAD | Simulations to predict the number of loci expected in RAD and GBS approaches |

2014-11-24 | someKfwer | Controlling the Generalized Familywise Error Rate |

2014-11-24 | xpose4 | Tools for Nonlinear Mixed-Effect Model Building and Diagnostics |

2014-11-23 | EloRating | Animal Dominance Hierarchies by Elo Rating |

2014-11-23 | RCryptsy | Access to Cryptsy Crypto-Currency Exchange Public Information API via R |

2014-11-22 | arfima | Fractional ARIMA Time Series Modeling |

2014-11-22 | bpcp | Beta Product Confidence Procedure for Right Censored Data |

2014-11-22 | greport | Graphical Reporting for Clinical Trials |

2014-11-22 | LambertW | Analyze and Gaussianize heavy-tailed, skewed data |

2014-11-22 | magrittr | A Forward-Pipe Operator for R |

2014-11-22 | MAPA | Multiple Aggregation Prediction Algorithm |

2014-11-22 | mkin | Routines for Fitting Kinetic Models with One or More State Variables to Chemical Degradation Data |

2014-11-22 | PASWR2 | Probability and Statistics with R, Second Edition |

2014-11-22 | pdc | Permutation Distribution Clustering |

2014-11-22 | PoweR | Computation of Power and Level Tables for Hypothesis Tests |

2014-11-22 | proteomics | Statistical Analysis of High Throughput Proteomics Data |

2014-11-22 | sisus | SISUS: Stable Isotope Sourcing using Sampling |

2014-11-21 | aprof | Amdahl's profiler, directed optimization made easy |

2014-11-21 | ivivc | A Data Analysis Tool for In Vitro-In Vivo Correlation (IVIVC) |

2014-11-21 | lmms | Linear mixed effect model splines for modelling and analysis of time course data |

2014-11-21 | Ramd | Tools For Managing File/function Dependencies In R |

2014-11-20 | BACprior | Choice of the Hyperparameter Omega in the Bayesian Adjustment for Confounding (BAC) Algorithm |

2014-11-20 | bglm | Bayesian Estimation in Generalized Linear Models |

2014-11-20 | crmn | CCMN and other noRMalizatioN methods for metabolomics data |

2014-11-20 | deltaPlotR | Identification of dichotomous differential item functioning (DIF) using Angoff's Delta Plot method |

2014-11-20 | gset | Group Sequential Design in Equivalence Studies |

2014-11-20 | ilc | Lee-Carter Mortality Models using Iterative Fitting Algorithms |

2014-11-20 | RAPIDR | Reliable Accurate Prenatal non-Invasive Diagnosis R package |

2014-11-20 | ROracle | OCI based Oracle database interface for R |

2014-11-20 | treethresh | Methods for Tree-based Local Adaptive Thresholding |

2014-11-20 | tsintermittent | Intermittent Time Series Forecasting |

2014-11-20 | x12 | x12 - wrapper function and structure for batch processing |

2014-11-20 | x12GUI | X12 - Graphical User Interface |

2014-11-19 | acnr | Annotated Copy-Number Regions |

2014-11-19 | adaptivetau | Tau-leaping stochastic simulation |

2014-11-19 | analogue | Analogue and weighted averaging methods for palaeoecology |

2014-11-19 | analogueExtra | Additional functions for use with the analogue package |

2014-11-19 | basicspace | Recovering a Basic Space from Issue Scales |

2014-11-19 | cocorresp | Co-correspondence Analysis Methods |

2014-11-19 | PGICA | Parallel Group ICA Algorithm |

2014-11-19 | QuACN | QuACN: Quantitative Analysis of Complex Networks |

2014-11-19 | SEAsic | Score Equity Assessment- summary index computation |

2014-11-19 | sqlutils | Utilities for working with SQL files |

2014-11-19 | waterData | An R Package for Retrieval, Analysis, and Anomaly Calculation of Daily Hydrologic Time Series Data |

2014-11-18 | attribrisk | Population Attributable Risk |

2014-11-18 | boolean3 | Boolean Binary Response Models |

2014-11-18 | CCAGFA | Bayesian canonical correlation analysis and group factor analysis |

2014-11-18 | cooccur | Probabilistic Species Co-occurrence Analysis in R |

2014-11-18 | fishmethods | Fishery Science Methods and Models in R |

2014-11-18 | lokern | Kernel Regression Smoothing with Local or Global Plug-in Bandwidth |

2014-11-18 | phylolm | Phylogenetic Linear Regression |

2014-11-18 | rsml | Plant Root System Markup Language (RSML) File Processing |

2014-11-18 | selectspm | Select point patterns models based on minimum contrast and AIC |

2014-11-18 | smacpod | Statistical Methods for the Analysis of Case-Control Point Data |

2014-11-18 | spatialTailDep | Estimation of spatial tail dependence models |

2014-11-18 | TSclust | Time Series Clustering Utilities |

2014-11-17 | goric | Generalized Order-Restricted Information Criterion |

2014-11-17 | mcprofile | Multiple Contrast Profiles |

2014-11-17 | randtests | Testing randomness in R |

2014-11-17 | sla | Two-Group Straight Line ANCOVA |

2014-11-17 | spThin | Functions for Spatial Thinning of Species Occurrence Records for Use in Ecological Models |

2014-11-16 | coneproj | Primal or Dual Cone Projections with Routines for Constrained Regression |

2014-11-16 | FLSSS | Fixed Size Subset Sum Solution |

2014-11-16 | vudc | Visualization of Univariate Data for Comparison |

2014-11-15 | Amelia | Amelia II: A Program for Missing Data |

2014-11-15 | grpreg | Regularization paths for regression models with grouped covariates |

2014-11-15 | GUIProfiler | Profiler Graphical User Interface |

2014-11-15 | vowels | Vowel Manipulation, Normalization, and Plotting |

2014-11-14 | CARBayesST | Poisson Log-linear Models with Spatio-temporal Random Effects |

2014-11-14 | crossval | Generic Functions for Cross Validation |

2014-11-14 | entropy | Estimation of Entropy, Mutual Information and Related Quantities |

2014-11-14 | equateIRT | Direct, Chain and Average Equating Coefficients with Standard Errors Using IRT Methods |

2014-11-14 | lm.br | Linear Model with Breakpoint |

2014-11-14 | mp | Multidimensional Projection Techniques |

2014-11-14 | ttScreening | Genome-wide DNA methylation sites screening by use of training and testing samples |

2014-11-13 | aftgee | Accelerated Failure Time Model with Generalized Estimating Equations |

2014-11-13 | bdscale | Remove Weekends and Holidays From ggplot2 Axes |

2014-11-13 | dbarts | Discrete Bayesian Additive Regression Trees Sampler |

2014-11-13 | entropart | Entropy Partitioning to Measure Diversity |

2014-11-13 | megaptera | MEGAPhylogeny Techniques in R |

2014-11-13 | optimx | A Replacement and Extension of the optim() Function |

2014-11-13 | pbkrtest | Parametric bootstrap and Kenward-Roger-based methods for mixed model comparison |

2014-11-13 | spatsurv | Bayesian spatial survival analysis with parametric proportional hazards models |

2014-11-13 | sudokuAlt | Tools for Making, Displaying and Spoiling Sudoku Games |

2014-11-13 | toxtestD | Experimental design for binary toxicity tests |

2014-11-12 | HapEstXXR | Multi-locus stepwise regression (MSR) |

2014-11-12 | lpSolveAPI | R Interface for lp_solve version 5.5.2.0 |

2014-11-12 | R2GUESS | Wrapper functions for GUESS |

2014-11-12 | rmongodb | R-MongoDB driver |

2014-11-11 | catdata | Categorical Data |

2014-11-11 | DepthProc | DepthProc |

2014-11-11 | glogis | Fitting and Testing Generalized Logistic Distributions |

2014-11-11 | lymphclon | Accurate Estimation of Clonal Coincidences and Abundances from Biological Replicates |

2014-11-11 | mombf | Moment and Inverse Moment Bayes factors |

2014-11-11 | qicharts | Quality Improvement Charts |

2014-11-11 | rTensor | Tools for tensor analysis and decomposition |

2014-11-11 | TopKLists | Inference, aggregation and visualization for top-k ranked lists |

2014-11-10 | episplineDensity | Density Estimation with Soft Information by Exponential Epi-splines |

2014-11-10 | gsDesign | Group Sequential Design |

2014-11-10 | HWxtest | Exact Tests for Hardy-Weinberg Proportions |

2014-11-10 | ionflows | Calculate the Number of Required Flows for Semiconductor Sequencing |

2014-11-10 | ips | Interfaces to Phylogenetic Software in R |

2014-11-10 | ISBF | Iterative Selection of Blocks of Features - ISBF |

2014-11-10 | ModelGood | Validation of risk prediction models |

2014-11-10 | mpath | Regularized Linear Models |

2014-11-10 | PHYLOGR | Functions for Phylogenetically Based Statistical Analyses |

2014-11-10 | Rcpp11 | R and C++11 |

2014-11-10 | Rothermel | Rothermel fire spread model for R |

2014-11-10 | TUWmodel | Lumped Hydrological Model for Education Purposes |

2014-11-09 | DOvalidation | Local Linear Hazard Estimation with Do-Validated and Cross-Validated Bandwidths |

2014-11-09 | riskSimul | Risk Quantification for Stock Portfolios under the T-Copula Model |

2014-11-09 | rugarch | Univariate GARCH models |

2014-11-08 | geometry | Mesh generation and surface tesselation |

2014-11-08 | LinCal | Static Univariate Frequentist and Bayesian Linear Calibration |

2014-11-08 | OptionPricing | Option Pricing with Efficient Simulation Algorithms |

2014-11-08 | stm | Estimation of the Structural Topic Model |

2014-11-07 | BB | Solving and Optimizing Large-Scale Nonlinear Systems |

2014-11-07 | biwavelet | Conduct Univariate and Bivariate Wavelet Analyses |

2014-11-07 | BTYD | Implementing Buy 'Til You Die Models |

2014-11-07 | dglm | Double Generalized Linear Models |

2014-11-07 | ggswissmaps | Offers Various Swiss Maps as ggplot2 Objects |

2014-11-07 | hypergeo | The Hypergeometric Function |

2014-11-07 | npsm | Package for Nonparametric Statistical Methods using R |

2014-11-07 | PANDA | Preferential Attachment Based Common Neighbor Distribution Derived Functional Associations |

2014-11-07 | plot3D | Plotting multi-dimensional data |

2014-11-07 | Rfit | Rank Estimation for Linear Models |

2014-11-07 | rminer | Data Mining Classification and Regression Methods |

2014-11-07 | rnrfa | UK National River Flow Archive data from R |

2014-11-07 | sqldf | Perform SQL Selects on R Data Frames |

2014-11-07 | weightedScores | Weighted Scores Method for Regression Models with Dependent Data |

2014-11-07 | wikipediatrend | Public Subject Attention via Wikipedia Page Access Statistics |

2014-11-06 | anim.plots | Simple Animated Plots For R |

2014-11-06 | confreq | Configural Frequencies Analysis Using Log-linear Modeling |

2014-11-06 | CpGFilter | CpG Filtering Method Based on Intra-class Correlation Coefficients |

2014-11-06 | diagram | Functions for visualising simple graphs (networks), plotting flow diagrams |

2014-11-06 | dma | Dynamic model averaging |

2014-11-06 | elliptic | elliptic functions |

2014-11-06 | GGIR | Raw Accelerometer Data Analysis |

2014-11-06 | lsgl | Linear Sparse Group Lasso |

2014-11-06 | msgl | High Dimensional Multiclass Classification Using Sparse Group Lasso |

2014-11-06 | PLSbiplot1 | The Partial Least Squares (PLS) Biplot |

2014-11-06 | pushoverr | Send push notifications using Pushover |

2014-11-06 | RobustAFT | Truncated Maximum Likelihood fit and Robust Accelerated Failure Time regression for Gaussian and logWeibull case |

2014-11-06 | rootSolve | Nonlinear root finding, equilibrium and steady-state analysis of ordinary differential equations |

2014-11-06 | tagcloud | Tag Clouds |

2014-11-06 | xtal | Crystallization Toolset |

2014-11-05 | geesmv | Modified Variance Estimators for Generalized Estimating Equations |

2014-11-05 | hcp | Change Point Estimation for Regression with Heteroscedastic Data |

2014-11-05 | label.switching | Relabelling MCMC outputs of mixture models |

2014-11-05 | MAT | Multidimensional Adaptive Testing |

2014-11-05 | MGL | Module Graphical Lasso |

2014-11-05 | MPAgenomics | Multi-Patient Analysis of Genomic Markers |

2014-11-05 | ordinalgmifs | Ordinal Regression for High-dimensional Data |

2014-11-05 | pca3d | Three dimensional PCA plots |

2014-11-05 | prc | Paired Response Curve |

2014-11-05 | Quandl | Quandl Data Connection |

2014-11-05 | shape | Functions for plotting graphical shapes, colors |

2014-11-05 | strap | Stratigraphic Tree Analysis for Palaeontology |

2014-11-05 | trip | Spatial Analysis of Animal Track Data |

2014-11-05 | TRSbook | Functions and Datasets to Accompany the Book "The R Software: Fundamentals of Programming and Statistical Analysis" |

2014-11-05 | WARN | Weaning Age Reconstruction with Nitrogen isotope analysis |

2014-11-05 | Watersheds | Spatial Watershed Aggregation and Spatial Drainage Network Analysis |

2014-11-04 | FAMILY | A Convex Formulation for Modeling Interactions with Strong Heredity |

2014-11-04 | feature | Feature significance for multivariate kernel density estimation |

2014-11-04 | FME | A Flexible Modelling Environment for Inverse Modelling, Sensitivity, Identifiability, Monte Carlo Analysis |

2014-11-04 | fslr | Wrapper functions for FSL (FMRIB Software Library) from Functional MRI of the Brain (FMRIB) |

2014-11-04 | marelac | Tools for Aquatic Sciences |

2014-11-04 | prim | Patient Rule Induction Method (PRIM) |

2014-11-04 | sglOptim | Sparse group lasso generic optimizer |

2014-11-04 | spareserver | Client side load balancing |

2014-11-04 | WhiteStripe | Whitestripe White Matter Normalization for Magnetic Resonance Images |

2014-11-03 | BayesTree | Bayesian Additive Regression Trees |

2014-11-03 | CombinePValue | Combine a Vector of Correlated p-values |

2014-11-03 | limSolve | Solving Linear Inverse Models |

2014-11-03 | mvabund | Statistical Methods for Analysing Multivariate Abundance Data |

2014-11-03 | PopGenome | An Efficient Swiss Army Knife for Population Genomic Analyses |

2014-11-03 | rARPACK | R wrapper of ARPACK for large scale eigenvalue/vector problems, on both dense and sparse matrices |

2014-11-03 | rjson | JSON for R |

2014-11-03 | ScoreGGUM | Score Persons Using the Generalized Graded Unfolding Model |

2014-11-03 | sdcTarget | Statistical Disclosure Control Substitution Matrix Calculator |

2014-11-03 | tm.plugin.webmining | Retrieve structured, textual data from various web sources |

2014-11-02 | bcpa | Behavioral change point analysis of animal movement |

2014-11-02 | CountsEPPM | Mean and variance modeling of count data |

2014-11-02 | disposables | Create Disposable R Packages for Testing |

2014-11-02 | OptimalCutpoints | Computing optimal cutpoints in diagnostic tests |

2014-11-01 | kaps | K-Adaptive Partitioning for Survival data |

2014-11-01 | RealVAMS | Multivariate VAM Fitting |

2014-11-01 | RMTstat | Distributions, Statistics and Tests derived from Random Matrix Theory |

2014-11-01 | smac | Sparse Multi-category Angle-Based Large-Margin Classifiers |

2014-11-01 | texreg | Conversion of R regression output to LaTeX or HTML tables |

2014-10-31 | laGP | Local Approximate Gaussian Process Regression |

2014-10-31 | PrivateLR | Differentially Private Regularized Logistic Regression |

2014-10-31 | tuple | Find every match, or orphan, duplicate, triplicate, or other replicated values |

2014-10-30 | fAssets | Rmetrics - Analysing and Modelling Financial Assets |

2014-10-30 | fPortfolio | Rmetrics - Portfolio Selection and Optimization |

2014-10-30 | hglm | Hierarchical Generalized Linear Models |

2014-10-30 | mapplots | Data Visualisation on Maps |

2014-10-29 | addreg | Additive Regression for Discrete Data |

2014-10-29 | deSolve | General Solvers for Initial Value Problems of Ordinary Differential Equations (ODE), Partial Differential Equations (PDE), Differential Algebraic Equations (DAE), and Delay Differential Equations (DDE) |

2014-10-29 | fBasics | Rmetrics - Markets and Basic Statistics |

2014-10-29 | isdals | Provides datasets for Introduction to Statistical Data Analysis for the Life Sciences |

2014-10-29 | ldr | Methods for likelihood-based dimension reduction in regression |

2014-10-29 | pander | An R Pandoc Writer |

2014-10-29 | peacots | Periodogram Peaks in Correlated Time Series |

2014-10-29 | R6 | Classes with reference semantics |

2014-10-28 | BSSasymp | Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing Matrix Estimates |

2014-10-28 | CateSelection | Categorical Variable Selection Methods |

2014-10-28 | energy | E-statistics (energy statistics) |

2014-10-28 | FAOSTAT | A complementary package to the FAOSTAT database and the Statistical Yearbook of the Food and Agricultural Organization of the United Nations |

2014-10-28 | lassoscore | High-Dimensional Inference with the Penalized Score Test |

2014-10-28 | robustreg | Robust Regression Functions |

2014-10-28 | safi | Sensitivity Analysis for Functional Input |

2014-10-28 | seqMeta | Meta-Analysis of Region-Based Tests of Rare DNA Variants |

2014-10-27 | astsa | Applied Statistical Time Series Analysis |

2014-10-27 | DALY | DALY Calculator - A GUI for stochastic DALY calculation in R |

2014-10-27 | fICA | Classical, Reloaded and Adaptive FastICA Algorithms |

2014-10-27 | PopGenReport | PopGenReport: A simple way to analyse and visualize population genetic data |

2014-10-27 | qdm | Fitting a Quadrilateral Dissimilarity Model to Same-Different Judgments |

2014-10-27 | rangeMapper | A platform for the study of macroecology of life history traits |

2014-10-27 | ropensecretsapi | R Package for the OpenSecrets.org API |

2014-10-27 | RQDA | R-based Qualitative Data Analysis |

2014-10-26 | RSelenium | R bindings for Selenium WebDriver |

2014-10-25 | BayesMixSurv | Bayesian Mixture Survival Models using Additive Mixture-of-Weibull Hazards, with Lasso Shrinkage and Stratification |

2014-10-25 | choroplethrMaps | Contains maps used by the choroplethr package |

2014-10-25 | DBKGrad | Discrete Beta Kernel Graduation of Mortality Data |

2014-10-25 | FSelector | Selecting attributes |

2014-10-25 | highD2pop | Two-Sample Tests for Equality of Means in High Dimension |

2014-10-25 | ivpack | Instrumental Variable Estimation |

2014-10-25 | MAINT.Data | Model and Analyse Interval Data |

2014-10-25 | RSQLite | SQLite Interface for R |

2014-10-25 | simTool | Conduct Simulation Studies with a Minimal Amount of Source Code |

2014-10-25 | sparr | The sparr package: SPAtial Relative Risk |

2014-10-25 | TwoStepCLogit | Conditional logistic regression: A two-step estimation method |

2014-10-25 | vecsets | like base::sets tools but keeps duplicate elements |

2014-10-25 | VIM | Visualization and Imputation of Missing Values |

2014-10-24 | ruv | Detect and Remove Unwanted Variation using Negative Controls |

2014-10-23 | CAMAN | Finite Mixture Models and meta-analysis tools - based on C.A.MAN |

2014-10-23 | httpuv | HTTP and WebSocket server library |

2014-10-23 | IsingFit | Fitting Ising models using the eLasso method |

2014-10-23 | JADE | JADE and other BSS methods as well as some BSS performance criteria |

2014-10-23 | matR | Metagenomics Analysis Tools for R |

2014-10-23 | sld | Estimation and Use of the Quantile-Based Skew Logistic Distribution |

2014-10-23 | splitstackshape | Stack and Reshape Datasets After Splitting Concatenated Values |

2014-10-22 | confidence | Confidence Estimation of Environmental State Classifications |

2014-10-22 | FDGcopulas | Multivariate Dependence with FDG Copulas |

2014-10-22 | indicoio | A simple R Wrapper for the indico set of APIs - http://indico.io |

2014-10-22 | JMdesign | Joint Modeling of Longitudinal and Survival Data - Power Calculation |

2014-10-22 | lmenssp | Linear Mixed Effects Models with Non-stationary Stochastic Processes |

2014-10-22 | ParetoPosStable | Computing, fitting and validating the PPS distribution |

2014-10-22 | pcaPP | Robust PCA by Projection Pursuit |

2014-10-22 | sigloc | Signal Location Estimation |

2014-10-22 | speedglm | Fitting Linear and Generalized Linear Models to large data sets |

2014-10-22 | stepp | Subpopulation Treatment Effect Pattern Plot (STEPP) |

2014-10-21 | cdcsis | Conditional Distance Correlation and Its Related Feature Screening Method |

2014-10-21 | equate | Observed-Score Linking and Equating |

2014-10-21 | extracat | Categorical Data Analysis and Visualization |

2014-10-21 | MESS | Miscellaneous Esoteric Statistical Scripts |

2014-10-21 | nhlscrapr | Compiling the NHL Real Time Scoring System Database for easy use in R |

2014-10-21 | npsp | Nonparametric spatial (geo)statistics |

2014-10-21 | SamplingStrata | Optimal stratification of sampling frames for multipurpose sampling surveys |

2014-10-21 | tclust | Robust Trimmed Clustering |

2014-10-20 | commentr | Print Nicely Formatted Comments for use in Script Files |

2014-10-20 | icapca | Mixed ICA/PCA |

2014-10-20 | MDSGUI | A GUI for interactive MDS in R |

2014-10-20 | multiwayvcov | Multi-way Standard Error Clustering |

2014-10-20 | npmlreg | Nonparametric maximum likelihood estimation for random effect models |

2014-10-20 | restlos | Robust Estimation of Location and Scatter |

2014-10-20 | Rook | Rook - a web server interface for R |

2014-10-19 | DEoptimR | Differential Evolution Optimization in pure R |

2014-10-19 | flare | Family of Lasso Regression |

2014-10-19 | meteoForecast | Numerical Weather Predictions |

2014-10-19 | multispatialCCM | Multispatial Convergent Cross Mapping |

2014-10-19 | picasso | Pathwise Calibrated Sparse Shooting Algorithm |

2014-10-19 | tis | Time Indexes and Time Indexed Series |

2014-10-18 | landpred | Landmark Prediction of a Survival Outcome |

2014-10-18 | rareNMtests | Ecological and biogeographical null model tests for comparing rarefaction curves |

2014-10-18 | stochprofML | Stochastic Profiling using Maximum Likelihood Estimation |

2014-10-17 | ecoval | Procedures for Ecological Assessment of Surface Waters |

2014-10-17 | fat2Lpoly | Two-locus Family-based Association Test with Polytomous Outcome |

2014-10-17 | gsg | Calculation of selection coefficients |

2014-10-17 | likert | Functions to analyze and visualize likert type items |

2014-10-17 | mdscore | Improved Score Tests for Generalized Linear Models |

2014-10-17 | pBrackets | Plot Brackets |

2014-10-17 | RMKdiscrete | Sundry Discrete Probability Distributions |

2014-10-17 | segmag | Determine Event Boundaries in Event Segmentation Experiments |

2014-10-17 | sisVIVE | Some Invalid Some Valid Instrumental Variables Estimator |

2014-10-16 | logbin | Relative Risk Regression Using the Log Binomial Model |

2014-10-16 | Metatron | Meta-analysis for Classification Data and Correction to Imperfect Reference |

2014-10-16 | NPCirc | Nonparametric Circular Methods |

2014-10-16 | PubMedWordcloud | PubMed Word Clouds |

2014-10-16 | RcmdrPlugin.steepness | Steepness Rcmdr Plug-in |

2014-10-16 | rivernet | Read, Analyze and Plot River Networks |

2014-10-16 | Rrdrand | Generate Physical Random Numbers on Intel CPUs with the RdRand instruction |

2014-10-16 | StMoSim | Plots a QQ-Norm Plot with several Gaussian simulations |

2014-10-16 | transport | Optimal transport in various forms |

2014-10-16 | windex | windex: Analysing convergent evolution using the Wheatsheaf index |

2014-10-15 | AlgDesign | Algorithmic Experimental Design |

2014-10-15 | clustvarsel | Variable Selection for Model-Based Clustering |

2014-10-15 | cwhmisc | Miscellaneous Functions for math, plotting, printing, statistics, strings, and tools |

2014-10-15 | evtree | Evolutionary Learning of Globally Optimal Trees |

2014-10-15 | GA | Genetic Algorithms |

2014-10-15 | nsgp | Non-Stationary Gaussian Process Regression |

2014-10-15 | spark | Sparklines in the R Terminal |

2014-10-15 | SpecsVerification | Forecast verification routines for the SPECS FP7 project |

2014-10-15 | spgrass6 | Interface between GRASS 6+ geographical information system and R |

2014-10-15 | utility | Construct, Evaluate and Plot Value and Utility Functions |

2014-10-15 | vetools | Tools for Venezuelan Environmental Data |

2014-10-14 | dice | Calculate probabilities of various dice-rolling events |

2014-10-14 | FADA | Variable selection for supervised classification in high dimension |

2014-10-14 | InterVA4 | Replicate and analyse InterVA4 |

2014-10-14 | mclogit | Mixed Conditional Logit |

2014-10-14 | overlap | Estimates of coefficient of overlapping for animal activity patterns |

2014-10-13 | Anthropometry | Statistical Methods for Anthropometric Data |

2014-10-13 | CP | Conditional Power Calculations |

2014-10-13 | datamart | Unified access to your data sources |

2014-10-13 | flam | Fits Piecewise Constant Models with Data-Adaptive Knots |

2014-10-13 | popRange | popRange: A spatially and temporally explicit forward genetic simulator |

2014-10-13 | prettyunits | Pretty, Human Readable Formatting of Quantities |

2014-10-13 | QualInt | Test for Qualitative Interactions |

2014-10-13 | rcdk | rcdk - Interface to the CDK Libraries |

2014-10-13 | RImpala | R and Impala |

2014-10-13 | sptm | SemiParametric Transformation Model Methods |

2014-10-12 | BSGW | Bayesian Survival Model using Generalized Weibull Regression |

2014-10-12 | ConvergenceConcepts | Seeing convergence concepts in action |

2014-10-12 | RNetLogo | Provides an Interface to the Agent-Based Modelling Platform NetLogo |

2014-10-10 | adwave | Wavelet Analysis of Genomic Data from Admixed Populations |

2014-10-10 | Benchmarking | Benchmark and Frontier Analysis Using DEA and SFA |

2014-10-10 | MplusAutomation | Automating Mplus Model Estimation and Interpretation |

2014-10-10 | RSQLServer | SQL Server R Database Interface (DBI) |

2014-10-09 | anominate | alpha-NOMINATE Ideal Point Estimator |

2014-10-09 | ENiRG | Ecological Niche in R and GRASS |

2014-10-09 | freqweights | Working with frequency tables |

2014-10-09 | minqa | Derivative-free optimization algorithms by quadratic approximation |

2014-10-09 | mpcv | Multivariate Process Capability Vector |

2014-10-08 | cclust | Convex Clustering Methods and Clustering Indexes |

2014-10-08 | moult | Models for analysing moult in birds |

2014-10-08 | Rdsm | Threads Environment for R |

2014-10-08 | seqDesign | Simulation and group sequential monitoring of randomized multi-arm two-stage Phase IIb/III treatment efficacy trials with time-to-event endpoints |

2014-10-07 | CINID | Curculionidae INstar IDentification |

2014-10-07 | ibelief | An R Package for Implementing Belief Functions |

2014-10-07 | MareyMap | Estimation of meiotic recombination rates using marey maps |

2014-10-07 | mnormpow | Multivariate Normal Distributions with Power Integrand |

2014-10-07 | PLordprob | Multivariate Ordered Probit Model via Pairwise Likelihood |

2014-10-07 | qcc | Quality Control Charts |

2014-10-07 | sft | Functions for Systems Factorial Technology Analysis of Data |

2014-10-07 | TEEReg | Trimmed Elemental Estimation for Linear Models |

2014-10-07 | TurtleGraphics | Turtle graphics in R |

2014-10-07 | VecStatGraphs3D | Vector analysis using graphical and analytical methods in 3D |

2014-10-07 | vegan3d | Static and dynamic 3D plots for vegan package |

2014-10-06 | GISTools | Some further GIS capabilities for R |

2014-10-06 | grofit | The package was developed to fit fit many growth curves obtained under different conditions |

2014-10-06 | lllcrc | Local Log-linear Models for Capture-Recapture |

2014-10-06 | mvprpb | Orthant Probability of the Multivariate Normal Distribution |

2014-10-06 | NB | Maximum Likelihood method in estimating effective population size from genetic data |

2014-10-06 | pingr | Check If a Remote Computer is Up |

2014-10-06 | ProjectTemplate | Automates the creation of new statistical analysis projects |

2014-10-06 | repra | Renewable Energy Probability Resource Assessment Tool (REPRA) |

2014-10-06 | snipEM | Snipping methods for robust estimation and clustering |

2014-10-06 | YourCast | Forecasting age-sex-country-cause mortality rates |

2014-10-06 | ZIM | Zero-Inflated Models for Count Time Series with Excess Zeros |

2014-10-05 | catIrt | An R Package for Simulating IRT-Based Computerized Adaptive Tests |

2014-10-05 | ENMeval | Automated runs and evaluations of ecological niche models |

2014-10-05 | pbdMPI | Programming with Big Data – Interface to MPI |

2014-10-04 | BMA | Bayesian Model Averaging |

2014-10-04 | numOSL | Numeric routines for optically stimulated luminescence dating |

2014-10-04 | qdap | Bridging the Gap Between Qualitative Data and Quantitative Analysis |

2014-10-04 | R2HTML | HTML exportation for R objects |

2014-10-04 | SightabilityModel | Wildlife Sightability Modeling |

2014-10-04 | vec2dtransf | 2D Cartesian Coordinate Transformation |

2014-10-03 | dawai | Discriminant analysis with additional information |

2014-10-03 | enpls | Ensemble Partial Least Squares (EnPLS) Regression |

2014-10-03 | gMCP | Graph Based Multiple Comparison Procedures |

2014-10-03 | semTools | Useful tools for structural equation modeling |

2014-10-03 | simsem | SIMulated Structural Equation Modeling |

2014-10-02 | ConConPiWiFun | Optimisation with Continuous Convex Piecewise (Linear and Quadratic) Functions |

2014-10-02 | data.table | Extension of data.frame |

2014-10-02 | DDIwR | DDI with R |

2014-10-02 | fpc | Flexible procedures for clustering |

2014-10-02 | mycor | Automatic Correlation and Regression Test in a Data Frame |

2014-10-02 | rsm | Response-surface analysis |

2014-10-02 | shrink | Global, Parameterwise and Joint Post-Estimation Shrinkage |

2014-10-02 | TED | Turbulence Time Series Event Detection and Classification |

2014-10-02 | WriteXLS | Cross-platform Perl based R function to create Excel 2003 (XLS) and Excel 2007 (XLSX) files |

2014-10-01 | deducorrect | deducorrect: Deductive correction, deductive imputation, and deterministic correction |

2014-10-01 | exsic | Convenience Functions for Botanists to Create Specimens Indices |

2014-10-01 | SQDA | Sparse Quadratic Discriminant Analysis |

2014-10-01 | steepness | Testing Steepness of Dominance Hierarchies |

2014-10-01 | testthat | Testthat code. Tools to make testing fun :) |

2014-09-30 | mdsdt | Functions for Analysis of Data with General Recognition Theory |

2014-09-30 | protViz | Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics |

2014-09-30 | rbamtools | An R package for reading and writing BAM (Binary alignment) files |

2014-09-30 | RHive | R and Hive |

2014-09-29 | activity | Animal Activity Statistics |

2014-09-29 | aLFQ | An R-package for estimating absolute protein quantities from label-free LC-MS/MS proteomics data |

2014-09-29 | atmcmc | Automatically Tuned Markov Chain Monte Carlo |

2014-09-29 | corpcor | Efficient Estimation of Covariance and (Partial) Correlation |

2014-09-29 | dendsort | Modular Leaf Ordering Methods for Dendrogram Nodes |

2014-09-29 | DoE.wrapper | Wrapper package for design of experiments functionality |

2014-09-29 | EffectStars | Visualization of Categorical Response Models |

2014-09-29 | gapmap | Functions for Drawing Gapped Cluster Heatmap with ggplot2 |

2014-09-29 | ggdendro | Tools for extracting dendrogram and tree diagram plot data for use with ggplot2 |

2014-09-29 | GPFDA | Apply Gaussian Process in Functional data analysis |

2014-09-29 | hierfstat | Estimation and tests of hierarchical F-statistics |

2014-09-29 | httpRequest | Basic HTTP Request |

2014-09-29 | log4r | A simple logging system for R, based on log4j |

2014-09-29 | LSAfun | Applied Latent Semantic Analysis (LSA) functions |

2014-09-29 | magicaxis | Pretty scientific plotting with minor-tick and log minor-tick support |

2014-09-29 | rFDSN | Get Seismic Data from the International Federation of Digital Seismograph Networks |

2014-09-29 | rjstat | Read and write JSON-stat data sets |

2014-09-29 | ScottKnott | The ScottKnott Clustering Algorithm |

2014-09-29 | soiltexture | Functions for soil texture plot, classification and transformation |

2014-09-29 | sprint | Simple Parallel R INTerface |

2014-09-29 | yuima | The YUIMA Project package for SDEs |

2014-09-28 | DoseFinding | Planning and Analyzing Dose Finding experiments |

2014-09-28 | ecoretriever | R Interface to the EcoData Retriever |

2014-09-28 | expands | ExPANdS |

2014-09-28 | HotDeckImputation | Hot Deck Imputation Methods for Missing Data |

2014-09-28 | mc2d | Tools for Two-Dimensional Monte-Carlo Simulations |

2014-09-28 | meboot | Maximum Entropy Bootstrap for Time Series |

2014-09-28 | microbenchmark | Accurate Timing Functions |

2014-09-28 | neural | Neural Networks |

2014-09-28 | pdfetch | Fetch economic and financial time series data from public sources |

2014-09-28 | readMzXmlData | Reads Mass Spectrometry Data in mzXML Format |

2014-09-28 | sweidnumbr | Handling of Swedish Identity Numbers |

2014-09-27 | MetFns | Analysis of Visual Meteor Data |

2014-09-27 | oro.pet | Rigorous - Positron Emission Tomography |

2014-09-27 | propagate | Propagation of Uncertainty |

2014-09-26 | ADDT | A Package for Analysis of Accelerated Destructive Degradation Test Data |

2014-09-26 | alr4 | Data to accompany Applied Linear Regression 4rd edition |

2014-09-26 | aplpack | Another Plot PACKage: stem.leaf, bagplot, faces, spin3R, plotsummary, plothulls, and some slider functions |

2014-09-26 | cape | Combined analysis of pleiotropy and epistasis |

2014-09-26 | GenWin | Spline Based Window Boundaries for Genomic Analyses |

2014-09-26 | Guerry | Maps, data and methods related to Guerry (1833) "Moral Statistics of France" |

2014-09-26 | iC10TrainingData | Training datasets for iC10 package |

2014-09-26 | jSonarR | jSonar Analytics Platform API for R |

2014-09-26 | lmSupport | Support for Linear Models |

2014-09-26 | oc | OC Roll Call Analysis Software |

2014-09-25 | betareg | Beta Regression |

2014-09-25 | exactci | Exact P-values and Matching Confidence Intervals for simple Discrete Parametric Cases |

2014-09-25 | GSE | Robust Estimation of Multivariate Location and Scatter in the Presence of Missing Data |

2014-09-25 | ivprobit | Instrumental variables probit model |

2014-09-25 | qqman | Q-Q and manhattan plots for GWAS data |

2014-09-25 | SPREDA | Statistical Package for Reliability Data Analysis |

2014-09-25 | virtualspecies | Generation of Virtual Species Distributions |

2014-09-24 | birdring | Methods to analyse ring re-encounter data |

2014-09-24 | Compind | Composite indicators functions |

2014-09-24 | DBI | R Database Interface |

2014-09-24 | deming | Deming, Thiel-Sen and Passing-Bablock Regression |

2014-09-24 | mmand | Mathematical morphology in any number of dimensions |

2014-09-24 | parsedate | Recognize and Parse Dates in Various Formats, Including All ISO 8601 Formats |

2014-09-24 | scam | Shape constrained additive models |

2014-09-24 | SimplicialCubature | Numerical integration of functions over simplices |

2014-09-24 | VennDiagram | Generate high-resolution Venn and Euler plots |

2014-09-23 | pvsR | An R package to interact with the Project Vote Smart API for scientific research |

2014-09-23 | SemiPar | Semiparametic Regression |

2014-09-23 | wnominate | WNOMINATE Roll Call Analysis Software |

2014-09-22 | dnet | Integrative analysis of omics data in terms of network, evolution and ontology |

2014-09-22 | documair | Automatic Documentation for R packages |

2014-09-22 | IBrokers | R API to Interactive Brokers Trader Workstation |

2014-09-22 | maps | Draw Geographical Maps |

2014-09-22 | mpmi | Mixed-pair mutual information estimators |

2014-09-22 | polysat | Tools for Polyploid Microsatellite Analysis |

2014-09-22 | predictmeans | Calculate Predicted Means for Linear Models |

2014-09-21 | CGP | Composite Gaussian process models |

2014-09-21 | RcmdrPlugin.MA | Graphical User Interface for Conducting Meta-Analyses in R |

2014-09-21 | rgeos | Interface to Geometry Engine - Open Source (GEOS) |

2014-09-21 | samplesize4surveys | Sample size calculations for complex surveys |

2014-09-21 | sendmailR | send email using R |

2014-09-21 | trotter | Pseudo-Vectors Containing All Permutations, Combinations and Subsets of Objects Taken from a Vector |

2014-09-20 | Density.T.HoldOut | Density.T.HoldOut: Non-combinatorial T-estimation Hold-Out for density estimation |

2014-09-20 | mitools | Tools for multiple imputation of missing data |

2014-09-20 | MST | Multivariate Survival Trees |

2014-09-20 | OrdLogReg | Ordinal Logic Regression |

2014-09-20 | RcppOctave | Seamless Interface to Octave – and Matlab |

2014-09-20 | shapes | Statistical shape analysis |

2014-09-20 | vdmR | Visual Data Mining Tools for R |

2014-09-19 | allelematch | Identifying unique multilocus genotypes where genotyping error and missing data may be present |

2014-09-19 | beanplot | Visualization via Beanplots (like Boxplot/Stripchart/Violin Plot) |

2014-09-19 | BEANSP | Bayesian Estimate of Age-specific Nest Survival Probabilities |

2014-09-19 | bReeze | Functions for wind resource assessment |

2014-09-19 | comclim | Community climate statistics |

2014-09-19 | edgeRun | More Powerful Unconditional Testing of Negative Binomial Means for Digital Gene Expression Data |

2014-09-19 | iki.dataclim | Consistency, Homogeneity and Summary Statistics of Climatological Data |

2014-09-19 | intervals | Tools for working with points and intervals |

2014-09-19 | LogicForest | Logic Forest |

2014-09-19 | multipleNCC | Weighted Cox-regression for nested case-control data |

2014-09-19 | nat.nblast | NeuroAnatomy Toolbox (nat) Extension for Assessing Neuron Similarity and Clustering |

2014-09-19 | nlWaldTest | Wald Test of nonlinear restrictions for regression parameters |

2014-09-19 | opentraj | Tools for Creating and Analysing Air Trajectory Data |

2014-09-19 | Rhpc | An R package for High-Performance Computing |

2014-09-19 | RidgeFusion | R Package for Ridge Fusion in Statistical Learning |

2014-09-19 | RMOA | Connect R with MOA for Massive Online Analysis |

2014-09-19 | sdmvspecies | Create virtual species for species distribution modelling |

2014-09-19 | SmoothHazard | Fitting illness-death model for interval-censored data |

2014-09-19 | spatialnbda | Performs spatial NBDA in a Bayesian context |

2014-09-18 | adaptDA | Adaptive Mixture Discriminant Analysis |

2014-09-18 | bbo | Biogeography-Based Optimization |

2014-09-18 | betategarch | Simulation, estimation and forecasting of Beta-Skew-t-EGARCH models |

2014-09-18 | clhs | Conditioned Latin Hypercube Sampling |

2014-09-18 | gfcanalysis | Tools for working with Hansen et al. 2013 Global Forest Change dataset |

2014-09-18 | ivbma | Bayesian Instrumental Variable Estimation and Model Determination via Conditional Bayes Factors |

2014-09-18 | modTempEff | Modelling temperature effects using time series data |

2014-09-18 | refGenome | Gene And Splice Site Annotation Using Annotation Data From Ensembl And UCSC Genome Browsers |

2014-09-18 | Rtsne | T-distributed Stochastic Neighbor Embedding using Barnes-Hut implementation |

2014-09-18 | TreeSim | Simulating trees under the birth-death model |

2014-09-18 | uskewFactors | Model-based clustering via mixtures of unrestricted skew-t factor analyzer models |

2014-09-17 | coin | Conditional Inference Procedures in a Permutation Test Framework |

2014-09-17 | fCopulae | Rmetrics - Bivariate Dependence Structures with Copulae |

2014-09-17 | qgtools | Tools for Quantitative Genetics Data Analyses |

2014-09-17 | RadioSonde | Tools for plotting skew-T diagrams and wind profiles |

2014-09-17 | RMOAjars | External jars required for package RMOA |

2014-09-16 | compute.es | Compute Effect Sizes |

2014-09-16 | dlm | Bayesian and Likelihood Analysis of Dynamic Linear Models |

2014-09-16 | dsm | Density surface modelling of distance sampling data |

2014-09-16 | fRegression | Rmetrics - Regression Based Decision and Prediction |

2014-09-16 | GuardianR | The Guardian API Wrapper |

2014-09-16 | hypergea | Hypergeometric tests |

2014-09-16 | m4fe | Models for Financial Economics |

2014-09-16 | nat.templatebrains | NeuroAnatomy Toolbox (nat) Extension for Handling Template Brains |

2014-09-16 | ncdf4 | Interface to Unidata netCDF (version 4 or earlier) format data files |

2014-09-16 | PerformanceAnalytics | Econometric tools for performance and risk analysis |

2014-09-16 | polidata | Political Data Interface in R |

2014-09-16 | qat | Quality Assurance Toolkit |

2014-09-16 | UPMASK | Unsupervised Photometric Membership Assignment in Stellar Clusters |

2014-09-15 | binequality | Methods for Analyzing Binned Income Data |

2014-09-15 | demography | Forecasting mortality, fertility, migration and population data |

2014-09-15 | fmsb | Functions for medical statistics book with some demographic data |

2014-09-15 | genlasso | Path algorithm for generalized lasso problems |

2014-09-15 | hot.deck | Multiple Hot-deck Imputation |

2014-09-15 | MissingDataGUI | A GUI for Missing Data Exploration |

2014-09-15 | netweavers | NetWeAvers: Weighted Averages for Networks |

2014-09-15 | propOverlap | Feature (gene) selection based on the Proportional Overlapping Scores |

2014-09-15 | qpcR | Modelling and analysis of real-time PCR data |

2014-09-15 | rredis | Redis client for R |

2014-09-15 | Ryacas | R interface to the yacas computer algebra system |

2014-09-15 | SOR | Estimation using Sequential Offsetted Regression |

2014-09-14 | agop | Aggregation Operators and Preordered Sets |

2014-09-14 | DLMtool | Data-Limited Methods Toolkit |

2014-09-14 | EDISON | Network Reconstruction and Changepoint Detection |

2014-09-14 | RcmdrPlugin.coin | Rcmdr Coin Plug-In |

2014-09-14 | RH2 | DBI/RJDBC interface to h2 Database |

2014-09-14 | RPMM | Recursively Partitioned Mixture Model |

2014-09-13 | geepack | Generalized Estimating Equation Package |

2014-09-13 | Lahman | Sean Lahman's Baseball Database |

2014-09-13 | phyloland | Modelling Competitive Exclusion and Limited Dispersal in a Statistical Phylogeographic Framework |

2014-09-13 | referenceIntervals | Reference Intervals |

2014-09-12 | Mobilize | Mobilize plots and functions |

2014-09-12 | nettools | A Network Comparison Framework |

2014-09-12 | PepPrep | Insilico peptide mutation, digestion and homologous comparison |

2014-09-12 | RGraphics | Data and Functions from the book R Graphics, Second Edition |

2014-09-12 | RhpcBLASctl | Control the number of threads on BLAS for R |

2014-09-12 | seewave | Sound analysis and synthesis |

2014-09-12 | SimComp | Simultaneous Comparisons for Multiple Endpoints |

2014-09-12 | xtable | Export tables to LaTeX or HTML |

2014-09-12 | zCompositions | Imputation of Zeros and Nondetects in Compositional Data Sets |

2014-09-11 | glmmLasso | Variable selection for generalized linear mixed models by L1-penalized estimation |

2014-09-11 | knnIndep | Independence tests and benchmarks |

2014-09-11 | lefse | Phylogenetic and Functional Analyses for Ecology |

2014-09-11 | OjaNP | Multivariate Methods Based on the Oja Median and Related Concepts |

2014-09-11 | pkgKitten | Create Simple Packages Which Do Not Upset R CMD check |

2014-09-11 | RankResponse | Ranking Responses in a Single Response Question or a Multiple Response Question |

2014-09-11 | rChoiceDialogs | rChoiceDialogs collection |

2014-09-11 | rsubgroup | Subgroup Discovery and Analytics |

2014-09-10 | caTools | Tools: moving window statistics, GIF, Base64, ROC AUC, etc |

2014-09-10 | cgam | Constrained Generalized Additive Model |

2014-09-10 | eegkitdata | Data for package eegkit |

2014-09-10 | ForwardSearch | Forward Search using asymptotic theory |

2014-09-10 | GGMselect | Gaussian Graphs Models selection |

2014-09-10 | hwriter | HTML Writer - Outputs R objects in HTML format |

2014-09-10 | isotone | Active set and generalized PAVA for isotone optimization |

2014-09-10 | mmcm | Modified Maximum Contrast Method |

2014-09-10 | mnlogit | Multinomial Logit Model |

2014-09-10 | Ohmage | R Client for Ohmage 2 server |

2014-09-10 | RcmdrPlugin.IPSUR | An IPSUR Plugin for the R Commander |

2014-09-10 | saery | Small Area Estimation for Rao and Yu Model |

2014-09-10 | Sim.DiffProc | Simulation of Diffusion Processes |

2014-09-09 | bpkde | Back-Projected Kernel Density Estimation |

2014-09-09 | CircE | Circumplex models Estimation |

2014-09-09 | couchDB | Connect and work with couchDB databases |

2014-09-09 | globalOptTests | Objective functions for benchmarking the performance of global optimization algorithms |

2014-09-09 | micropan | Microbial Pan-genome Analysis |

2014-09-09 | spam | SPArse Matrix |

2014-09-09 | TripleR | Social Relation Model (SRM) analyses for single or multiple round-robin groups |

2014-09-08 | accrued | Visualization tools for partially accruing data |

2014-09-08 | anacor | Simple and Canonical Correspondence Analysis |

2014-09-08 | astro | Astronomy Functions, Tools and Routines |

2014-09-08 | easyanova | Analysis of variance and other important complementary analyzes |

2014-09-08 | emulator | Bayesian emulation of computer programs |

2014-09-08 | funHDDC | Model-based clustering in group-specific functional subspaces |

2014-09-08 | htmltools | Tools for HTML |

2014-09-08 | ibd | INCOMPLETE BLOCK DESIGNS |

2014-09-08 | lunar | Lunar Phase & Distance, Seasons and Other Environmental Factors |

2014-09-08 | minque | An R Package for Linear Mixed Model Analyses |

2014-09-08 | operators | Additional binary operators for the R language |

2014-09-08 | RcmdrPlugin.EBM | Rcmdr Evidence Based Medicine Plug-In package |

2014-09-08 | slackr | Send messages, images, R objects and files to Slack.com channels/users |

2014-09-08 | SNFtool | Similarity Network Fusion |

2014-09-07 | bionetdata | Biological and chemical data networks |

2014-09-07 | OpenRepGrid | Tools to analyse repertory grid data |

2014-09-07 | PerfMeas | PerfMeas: Performance Measures for ranking and classification tasks |

2014-09-07 | Rsomoclu | R package for somoclu |

2014-09-07 | rucm | Implementation of Unobserved Components Model (UCM) in R |

2014-09-06 | fMultivar | Rmetrics - Analysing and Modeling Multivariate Financial Return Distributions |

2014-09-06 | GDAtools | A toolbox for the analysis of categorical data in social sciences, and especially Geometric Data Analysis |

2014-09-06 | logcondens | Estimate a Log-Concave Probability Density from iid Observations |

2014-09-06 | OrdFacReg | Least Squares, Logistic, and Cox-Regression with Ordered Predictors |

2014-09-06 | pyramid | Functions to draw population pyramid |

2014-09-06 | selectMeta | Estimation of Weight Functions in Meta Analysis |

2014-09-05 | caseMatch | Identify similar cases for qualitative case studies |

2014-09-05 | GxM | Maximum Likelihood Estimation for Gene-by-Measured Environment Interaction Models |

2014-09-05 | readbitmap | Simple Unified Interface to Read Bitmap Images (BMP,JPEG,PNG) |

2014-09-05 | REBayes | Empirical Bayes Estimation and Inference in R |

2014-09-05 | structSSI | Multiple Testing for Hypotheses with Hierarchical or Group Structure |

2014-09-04 | BCA | Business and Customer Analytics |

2014-09-04 | cooptrees | Cooperative aspects of optimal trees in weighted graphs |

2014-09-04 | CopulaRegression | Bivariate Copula Based Regression Models |

2014-09-04 | Ecdat | Data sets for econometrics |

2014-09-04 | haplo.stats | Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous |

2014-09-04 | helloJavaWorld | Hello Java World |

2014-09-04 | idr | Irreproducible discovery rate |

2014-09-04 | insuranceData | A Collection of Insurance Datasets Useful in Risk Classification in Non-life Insurance |

2014-09-04 | kmi | Kaplan-Meier multiple imputation for the analysis of cumulative incidence functions in the competing risks setting |

2014-09-04 | miscset | Miscellaneous Tools Set |

2014-09-04 | MRCV | Methods for Analyzing Multiple Response Categorical Variables (MRCVs) |

2014-09-04 | parcor | Regularized estimation of partial correlation matrices |

2014-09-04 | plsdof | Degrees of Freedom and Statistical Inference for Partial Least Squares Regression |

2014-09-04 | PP | Person Parameter estimation |

2014-09-04 | ppls | Penalized Partial Least Squares |

2014-09-04 | pqantimalarials | web tool for estimating under-five deaths caused by poor-quality antimalarials in sub-Saharan Africa |

2014-09-04 | RcmdrMisc | R Commander Miscellaneous Functions |

2014-09-04 | RcmdrPlugin.BCA | Rcmdr Plug-In for Business and Customer Analytics |

2014-09-04 | sanon | Stratified Analysis with Nonparametric covariable adjustment |

2014-09-04 | SDaA | Sampling: Design and Analysis |

2014-09-04 | sparseSEM | Sparse-aware Maximum Likelihood for Structural Equation Models |

2014-09-03 | coreTDT | TDT for compound heterozygous and recessive models |

2014-09-03 | DNAtools | Tools for analysing forensic genetic DNA data |

2014-09-03 | logitchoice | Fitting l2-regularized logit choice models via generalized gradient descent |

2014-09-03 | MSIseq | Assess Tumor Microsatellite Instability with a Decision Tree Classifier from Exome Somatic Mutations |

2014-09-03 | upclass | Updated Classification Methods using Unlabeled Data |

2014-09-02 | ds | Descriptive Statistics |

2014-09-02 | exactmeta | Exact fixed effect meta analysis |

2014-09-02 | ica | Independent Component Analysis |

2014-09-02 | nor1mix | Normal (1-d) Mixture Models (S3 Classes and Methods) |

2014-09-02 | optrees | Optimal Trees in Weighted Graphs |

2014-09-02 | rappdirs | Application directories: determine where to save data, caches and logs |

2014-09-01 | agricolae | Statistical Procedures for Agricultural Research |

2014-09-01 | chebpol | Multivariate Chebyshev interpolation |

2014-09-01 | e1071 | Misc Functions of the Department of Statistics (e1071), TU Wien |

2014-09-01 | heavy | Package for robust estimation using heavy-tailed distributions |

2014-09-01 | lgarch | Simulation and estimation of log-GARCH models |

2014-09-01 | mixOmics | Omics Data Integration Project |

2014-09-01 | OpasnetUtils | Utility functions for dealing with data in Opasnet (www.opasnet.org) environment |

2014-09-01 | RankAggreg | Weighted rank aggregation |

2014-09-01 | Rbitcoin | R & bitcoin integration |

2014-09-01 | RCEIM | RCEIM - R Cross Entropy Inspired Method for Optimization |

2014-09-01 | StAMPP | Statistical Analysis of Mixed Ploidy Populations |

2014-09-01 | traitr | An interface for creating GUIs modeled in part after traits UI module for python |

2014-08-31 | chemosensors | A tool for the design of synthetic experiments in machine olfaction |

2014-08-31 | chords | Estimation in respondent driven samples |

2014-08-31 | lbfgs | Limited-memory BFGS Optimization |

2014-08-31 | ngramr | Retrieve and plot Google n-gram data |

2014-08-31 | pmg | Poor Man's GUI |

2014-08-31 | rcdklibs | rcdklib - CDK libraries packaged for R |

2014-08-31 | RNetCDF | R Interface to NetCDF Datasets |

2014-08-30 | mcIRT | IRT models for multiple choice items (mcIRT) |

2014-08-30 | nsRFA | Non-supervised Regional Frequency Analysis |

2014-08-30 | survivalMPL | Penalised Maximum Likelihood for Survival Analysis Models |

2014-08-29 | BIOM.utils | Utilities for the BIOM (Biological Observation Matrix) Format |

2014-08-29 | Eplot | Plotting longitudinal series |

2014-08-29 | FreeSortR | Free Sorting data analysis |

2014-08-29 | iosmooth | Functions for smoothing with infinite order flat-top kernels |

2014-08-29 | lakemorpho | Lake morphometry in R |

2014-08-29 | MGSDA | Multi-Group Sparse Discriminant Analysis |

2014-08-29 | mme | Multinomial Mixed Effects Models |

2014-08-29 | raincpc | Obtain and Analyze Rainfall Data from the Climate Prediction Center |

2014-08-29 | Rcapture | Loglinear Models for Capture-Recapture Experiments |

2014-08-29 | RcmdrPlugin.FactoMineR | Graphical User Interface for FactoMineR |

2014-08-29 | riverplot | Sankey or ribbon plots |

2014-08-29 | SQUAREM | Squared extrapolation methods for accelerating fixed-point iterations |

2014-08-29 | turboEM | A Suite of Convergence Acceleration Schemes for EM, MM and other fixed-point algorithms |

2014-08-28 | bfast | Breaks For Additive Season and Trend (BFAST) |

2014-08-28 | BioStatR | Initiation à la Statistique avec R |

2014-08-28 | bvarsv | Bayesian Analysis of a Vector Autoregressive Model with Stochastic Volatility and Time-Varying Parameters |

2014-08-28 | cgAUC | Calculate AUC-type measure when gold standard is continuous and the corresponding optimal linear combination of variables with respect to it |

2014-08-28 | fastR | Data sets and utilities for Foundations and Applications of Statistics by R Pruim |

2014-08-28 | georob | Robust Geostatistical Analysis of Spatial Data |

2014-08-28 | gWidgets | gWidgets API for building toolkit-independent, interactive GUIs |

2014-08-28 | ifultools | Insightful Research Tools |

2014-08-28 | LatticeKrig | Multiresolution Kriging based on Markov random fields |

2014-08-28 | rAvis | Interface to the bird-watching datasets at proyectoavis.com |

2014-08-28 | RcmdrPlugin.DoE | R Commander Plugin for (industrial) Design of Experiments |

2014-08-28 | Runuran | R interface to the UNU.RAN random variate generators |

2014-08-28 | trajectories | Classes and methods for trajectory data |

2014-08-27 | blkergm | Fitting block ERGM given the block structure on social networks |

2014-08-27 | dotenv | Load environment variables from .env |

2014-08-27 | GMD | Generalized Minimum Distance of distributions |

2014-08-27 | gsubfn | Utilities for strings and function arguments |

2014-08-27 | lmeVarComp | Testing for a subset of variance components in linear mixed models |

2014-08-27 | MultiSV | MultiSV: an R package for identification of structural variations in multiple populations based on whole genome resequencing |

2014-08-27 | pamr | Pam: prediction analysis for microarrays |

2014-08-27 | ptinpoly | Point-In-Polyhedron Test (2D and 3D) |

2014-08-27 | SelvarMix | Regularization for variable selection in model-based clustering and discriminant analysis |

2014-08-27 | shopifyr | An R Interface to the Shopify API |

2014-08-27 | statebins | statebins is an alternative to choropleth maps for USA States |

2014-08-26 | BTSPAS | Bayesian Time-Strat. Population Analysis |

2014-08-26 | cents | Censored time series |

2014-08-26 | emplik | Empirical likelihood ratio for censored/truncated data |

2014-08-26 | gmatrix | An R Package for Harnessing GPU Power |

2014-08-26 | HistogramTools | Utility Functions for R Histograms |

2014-08-26 | HTSCluster | Clustering high throughput sequencing (HTS) data |

2014-08-26 | KANT | Package to identify and sort genes overexpressed |

2014-08-26 | minerva | minerva: Maximal Information-Based Nonparametric Exploration R package for Variable Analysis |

2014-08-26 | spcadjust | Functions for calibrating control charts |

2014-08-26 | testthatsomemore | A mocking, stubbing, and file testing framework extending testthat |

2014-08-25 | commandr | Command pattern in R |

2014-08-25 | CommonJavaJars | Useful libraries for building a Java based GUI under R |

2014-08-25 | granova | Graphical Analysis of Variance |

2014-08-25 | hapassoc | Inference of trait associations with SNP haplotypes and other attributes using the EM Algorithm |

2014-08-25 | MultNonParam | Multivariate Nonparametric Methods |

2014-08-25 | mutossGUI | A graphical user interface for the MuToss Project |

2014-08-25 | nopp | Nash Optimal Party Positions |

2014-08-25 | remote | Empirical Orthogonal Teleconnections in R |

2014-08-25 | sde | Simulation and Inference for Stochastic Differential Equations |

2014-08-25 | shotGroups | Analyze shot group data |

2014-08-24 | CosmoPhotoz | Photometric redshift estimation using generalized linear models |

2014-08-24 | HLSM | Hierarchical latent space network model (HLSM) |

2014-08-24 | mkde | 2D and 3D movement-based kernel density estimates (MKDEs) |

2014-08-24 | RsimMosaic | R Simple IMage Mosaic creation library |

2014-08-24 | schoRsch | Tools for analyzing factorial experiments |

2014-08-24 | sonicLength | Estimating Abundance of Clones from DNA fragmentation data |

2014-08-23 | AMOEBA | A Multidirectional Optimum Ecotope-Based Algorithm |

2014-08-23 | bigRR | Generalized Ridge Regression (with special advantage for p >> n cases) |

2014-08-23 | gamclass | Functions and data for a course on modern regression and classification |

2014-08-23 | labeling | Axis Labeling |

2014-08-23 | mosaicData | Project MOSAIC (mosaic-web.org) data sets |

2014-08-23 | mppa | Statistics for analysing multiple simultaneous point processes on the real line |

2014-08-23 | NHANES | NHANES data |

2014-08-23 | pauwels2014 | Bayesian Experimental Design for Systems Biology |

2014-08-23 | survAccuracyMeasures | Estimate accuracy measures for risk prediction markers from survival data |

2014-08-22 | bdsmatrix | Routines for Block Diagonal Symmetric matrices |

2014-08-22 | qualityTools | Statistical Methods for Quality Science |

2014-08-22 | scaRabee | Optimization Toolkit for Pharmacokinetic-Pharmacodynamic Models |

2014-08-22 | scholar | Analyse citation data from Google Scholar |

2014-08-22 | spdynmod | Spatio-dynamic wetland plant communities model |

2014-08-22 | wpp2012 | World Population Prospects 2012 |

2014-08-22 | xlsxjars | Package required POI jars for the xlsx package |

2014-08-21 | boilerpipeR | Interface to the boilerpipe Java library by Christian Kohlschutter (http://code.google.com/p/boilerpipe/) |

2014-08-21 | childsds | Calculation of standard deviation scores adduced from different growth standards |

2014-08-21 | EpiDynamics | Dynamic Models in Epidemiology |

2014-08-21 | mvnfast | Fast multivariate normal methods |

2014-08-21 | sensory | Simultaneous Model-Based Clustering and Imputation via a Progressive Expectation-Maximization (PEM) algorithm |

2014-08-21 | SocialNetworks | Generates social networks based on distance |

2014-08-21 | SparseTSCGM | Sparse time series chain graphical models |

2014-08-21 | TableToLongForm | TableToLongForm |

2014-08-20 | CCTpack | Cultural Consensus Theory applications to data |

2014-08-20 | GLSME | Generalized Least Squares with Measurement Error |

2014-08-20 | matpow | matrix powers |

2014-08-20 | mokken | Mokken Scale Analysis in R |

2014-08-20 | rsunlight | Interface to Sunlight Foundation APIs |

2014-08-19 | DStree | Recursive Partitioning for Discrete-Time Survival Trees |

2014-08-19 | extlasso | Maximum penalized likelihood estimation with extended lasso penalty |

2014-08-19 | FD | Measuring functional diversity (FD) from multiple traits, and other tools for functional ecology |

2014-08-19 | laeken | Estimation of indicators on social exclusion and poverty |

2014-08-19 | RcmdrPlugin.EcoVirtual | Rcmdr EcoVirtual Plugin |

2014-08-19 | rite | The Right Editor to Write R |

2014-08-19 | TukeyC | Conventional Tukey Test |

2014-08-18 | BayesX | R Utilities Accompanying the Software Package BayesX |

2014-08-18 | bigmemory.sri | A shared resource interface for Bigmemory Project packages |

2014-08-18 | gap | Genetic analysis package |

2014-08-18 | mvrtn | Mean and Variance of Truncated Normal Distribution |

2014-08-18 | PhyActBedRest | Marks periods of sleep in Actigraph accelerometer data |

2014-08-18 | recommenderlab | Lab for Developing and Testing Recommender Algorithms |

2014-08-18 | robCompositions | Robust Estimation for Compositional Data |

2014-08-17 | classify | Classification Accuracy and Consistency under IRT models |

2014-08-17 | gglasso | Group Lasso Penalized Learning Using A Unified BMD Algorithm |

2014-08-17 | LPmerge | Merging linkage maps by linear programming |

2014-08-17 | PTAk | Principal Tensor Analysis on k modes |

2014-08-17 | W3CMarkupValidator | R Interface to W3C Markup Validation Services |

2014-08-16 | EcoVirtual | Simulation of Ecological Models |

2014-08-16 | ELT | ELT - A package to build Experience Life Tables |

2014-08-16 | planar | Multilayer optics |

2014-08-16 | RGoogleAnalytics | R Wrapper for the Google Analytics API |

2014-08-16 | RootsExtremaInflections | Finds roots, extrema and inflection points of a curve |

2014-08-16 | snpar | Supplementary Non-parametric Statistics Methods |

2014-08-15 | COUNT | Functions, data and code for count data |

2014-08-15 | CVTuningCov | Regularized Estimators of Covariance Matrices with CV Tuning |

2014-08-15 | gCat | Graph-based two-sample tests for categorical data |

2014-08-15 | phtt | Panel Data Analysis with Heterogeneous Time Trends |

2014-08-15 | pycno | Pycnophylactic Interpolation |

2014-08-15 | rprintf | Adaptive builder for formatted strings |

2014-08-15 | rtype | A strong type system for R |

2014-08-15 | semPlot | Path diagrams and visual analysis of various SEM packages' output |

2014-08-15 | survey | analysis of complex survey samples |

2014-08-14 | AntWeb | programmatic interface to the AntWeb |

2014-08-14 | CBPS | R Package for Covariate Balancing Propensity Score |

2014-08-14 | fastGHQuad | Fast Rcpp implementation of Gauss-Hermite quadrature |

2014-08-14 | hmmm | hierarchical multinomial marginal models |

2014-08-14 | RFLPtools | Tools to analyse RFLP data |

2014-08-14 | trimTrees | Trimmed opinion pools of trees in a random forest |

2014-08-14 | XLConnectJars | JAR dependencies for the XLConnect package |

2014-08-13 | BlandAltmanLeh | Plots (slightly extended) Bland-Altman plots |

2014-08-13 | dicionariosIBGE | Dictionaries for reading microdata surveys from IBGE |

2014-08-13 | dynsim | An R implementation of dynamic simulations of autoregressive relationships |

2014-08-13 | growthrate | Bayesian reconstruction of growth velocity |

2014-08-13 | LEAPFrOG | Likelihood Estimation of Admixture in Parents From Offspring Genotypes |

2014-08-13 | linkcomm | Tools for Generating, Visualizing, and Analysing Link Communities in Networks |

2014-08-13 | optmatch | Functions for optimal matching |

2014-08-13 | ReporteRsjars | External jars required for package ReporteRs |

2014-08-13 | tvd | Total Variation Denoising |

2014-08-12 | astrodatR | Astronomical Data |

2014-08-12 | cAIC4 | Conditional Akaike information criterion for lme4 |

2014-08-12 | cramer | Multivariate nonparametric Cramer-Test for the two-sample-problem |

2014-08-12 | ergm.graphlets | ergm.graphlets: A Package for ERG Modeling Based on Graphlet Properties |

2014-08-12 | lfstat | Calculation of Low Flow Statistics for daily stream flow data |

2014-08-12 | random.polychor.pa | A Parallel Analysis With Polychoric Correlation Matrices |

2014-08-12 | RLRsim | Exact (Restricted) Likelihood Ratio tests for mixed and additive models |

2014-08-12 | twostageTE | Two-Stage Threshold Estimation |

2014-08-12 | Xmisc | Xiaobei's miscellaneous classes and functions |

2014-08-11 | hdi | High-Dimensional Inference |

2014-08-11 | ibeemd | Irregular-lattice based ensemble empirical mode decomposition |

2014-08-11 | lgtdl | A set of methods for longitudinal data objects |

2014-08-11 | MALDIquant | Quantitative Analysis of Mass Spectrometry Data |

2014-08-11 | MALDIquantForeign | Import/Export routines for MALDIquant |

2014-08-11 | MicroDatosEs | Utilities for Official Spanish Microdata |

2014-08-11 | threeboost | Thresholded variable selection and prediction based on estimating equations |

2014-08-11 | vartors | Transform Definition of Variables to R Scripts |

2014-08-11 | wfe | Weighted Linear Fixed Effects Regression Models for Causal Inference |

2014-08-10 | alleHap | Allele simulation and Haplotype reconstruction from pedigree databases |

2014-08-10 | hglasso | Learning graphical models with hubs |

2014-08-10 | RWebLogo | plotting custom sequence logos |

2014-08-10 | tiger | TIme series of Grouped ERrors |

2014-08-10 | UScancer | Create US cancer datasets from SEER, IARC, and US Census data |

2014-08-10 | vrtest | Variance Ratio tests and other tests for Martingale Difference Hypothesis |

2014-08-09 | astrolibR | Astronomy Users Library |

2014-08-09 | binseqtest | Exact Binary Sequential Designs and Analysis |

2014-08-09 | CHAT | Clonal Heterogeneity Analysis Tool |

2014-08-09 | dglars | Differential Geometric LARS (dgLARS) method |

2014-08-09 | distr | Object oriented implementation of distributions |

2014-08-09 | ecipex | Efficient calculation of fine structure isotope patterns via Fourier transforms of simplex-based elemental models |

2014-08-09 | hexbin | Hexagonal Binning Routines |

2014-08-09 | muhaz | Hazard Function Estimation in Survival Analysis |

2014-08-09 | mvmeta | Multivariate and Univariate Meta-Analysis and Meta-Regression |

2014-08-09 | NScluster | Simulation and Estimation of the Neyman-Scott Type Spatial Cluster Models |

2014-08-09 | SnowballC | Snowball stemmers based on the C libstemmer UTF-8 library |

2014-08-09 | SNSequate | Standard and Nonstandard Statistical Models and Methods for Test Equating |

2014-08-09 | sybilcycleFreeFlux | cycle-Free Flux balance analysis: Efficient removal of thermodynamically infeasible cycles from metabolic flux distributions |

2014-08-08 | itertools2 | itertools2: Functions creating iterators for efficient looping |

2014-08-08 | LDRTools | Tools for Linear Dimension Reduction |

2014-08-08 | portes | Portmanteau Tests for Univariate and Multivariate Time Series Models |

2014-08-08 | rgp | R genetic programming framework |

2014-08-08 | RTriangle | Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator |

2014-08-08 | SpatialPack | Package for analysis of spatial data |

2014-08-06 | BioMark | Find biomarkers in two-class discrimination problems |

2014-08-06 | federalregister | Client package for the U.S. Federal Register API |

2014-08-06 | gMWT | Generalized Mann-Whitney Type Tests |

2014-08-06 | heatmapFit | Fit statistic for binary dependent variable models |

2014-08-06 | klaR | Classification and visualization |

2014-08-06 | osDesign | Design and analysis of observational studies |

2014-08-06 | rje | Miscellaneous useful functions |

2014-08-05 | dave | Functions for "Data Analysis in Vegetation Ecology" |

2014-08-05 | dendroextras | Extra functions to cut, label and colour dendrogram clusters |

2014-08-05 | dlnm | Distributed Lag Non-linear Models |

2014-08-05 | EMMIXuskew | Fitting Unrestricted Multivariate Skew t Mixture Models |

2014-08-05 | expp | Spatial analysis of extra-pair paternity |

2014-08-05 | hmm.discnp | Hidden Markov models with discrete non-parametric observation distributions |

2014-08-05 | rfigshare | an R interface to figshare.com |

2014-08-05 | SDMTools | Species Distribution Modelling Tools: Tools for processing data associated with species distribution modelling exercises |

2014-08-04 | BHMSMAfMRI | Bayesian hierarchical multi-subject multiscale analysis of functional MRI data |

2014-08-04 | breakaway | Species richness estimation and modelling |

2014-08-04 | ChemometricsWithR | Chemometrics with R - Multivariate Data Analysis in the Natural Sciences and Life Sciences |

2014-08-04 | decctools | Get energy data from the UK Dept of Energy and Climate Change |

2014-08-04 | MixedTS | Mixed Tempered Stable Distribution |

2014-08-04 | nloptr | R interface to NLopt |

2014-08-04 | phonTools | Functions for phonetics in R |

2014-08-04 | pomp | Statistical inference for partially observed Markov processes |

2014-08-04 | squash | Color-based plots for multivariate visualization |

2014-08-04 | symmoments | Symbolic central and noncentral moments of the multivariate normal distribution |

2014-08-03 | interAdapt | interAdapt |

2014-08-03 | mmod | Modern measures of population differentiation |

2014-08-03 | PottsUtils | Utility Functions of the Potts Models |

2014-08-03 | rPython | Package allowing R to call Python |

2014-08-03 | sanitizers | C/C++ source code to trigger Address and Undefined Behaviour Sanitizers |

2014-08-03 | sem | Structural Equation Models |

2014-08-03 | statfi | statfi R tools |

2014-08-03 | vcd | Visualizing Categorical Data |

2014-08-02 | CerioliOutlierDetection | Outlier detection using the iterated RMCD method of Cerioli (2010) |

2014-08-02 | MGRASTer | API Client for the MG-RAST Server of the US DOE KBase |

2014-08-02 | topologyGSA | Gene Set Analysis Exploiting Pathway Topology |

2014-08-02 | xlsx | Read, write, format Excel 2007 and Excel 97/2000/XP/2003 files |

2014-08-01 | coenocliner | Coenocline simulation |

2014-08-01 | emil | Evaluation of Modeling without Information Leakage |

2014-08-01 | ic.infer | Inequality constrained inference in linear normal situations |

2014-08-01 | LinearizedSVR | Linearized Support Vector Regression |

2014-08-01 | optiscale | Optimal scaling |

2014-08-01 | subgroup | Methods for exploring treatment effect heterogeneity in subgroup analysis of clinical trials |

2014-07-31 | agsemisc | Miscellaneous plotting and utility functions |

2014-07-31 | bayou | Bayesian fitting of Ornstein-Uhlenbeck models to phylogenies |

2014-07-31 | FrF2 | Fractional Factorial designs with 2-level factors |

2014-07-31 | GeoDE | A geometrical Approach to Differential expression and gene-set enrichment |

2014-07-31 | GNE | Computation of generalized Nash equilibria |

2014-07-31 | RefFreeEWAS | EWAS using reference-Free DNA methylation mixture deconvolution |

2014-07-31 | SAPP | Statistical Analysis of Point Processes |

2014-07-31 | timsac | TIMe Series Analysis and Control package |

2014-07-30 | arulesNBMiner | Mining NB-Frequent Itemsets and NB-Precise Rules |

2014-07-30 | btf | Estimates univariate function via Bayesian trend filtering |

2014-07-30 | codep | Multiscale Codependence Analysis |

2014-07-30 | CRF | CRF - Conditional Random Fields |

2014-07-30 | ExceedanceTools | Confidence regions for exceedance sets and contour lines |

2014-07-30 | rareGE | Testing Gene-Environment Interaction for Rare Genetic Variants |

2014-07-29 | hasseDiagram | Drawing Hasse diagram |

2014-07-29 | NeatMap | Non-clustered heatmap alternatives |

2014-07-29 | psychomix | Psychometric Mixture Models |

2014-07-29 | RODBCext | Parameterized queries extension for RODBC |

2014-07-29 | rorutadis | Robust Ordinal Regression UTADIS |

2014-07-29 | stocc | Fit a spatial occupancy model via Gibbs sampling |

2014-07-28 | cosinor | Tools for estimating and predicting the cosinor model |

2014-07-28 | cplexAPI | R Interface to C API of IBM ILOG CPLEX |

2014-07-28 | cvxclustr | Splitting methods for convex clustering |

2014-07-28 | drfit | Dose-response data evaluation |

2014-07-28 | gmp | Multiple Precision Arithmetic |

2014-07-28 | LowRankQP | Low Rank Quadratic Programming |

2014-07-28 | ltbayes | Simulation-Based Bayesian Inference for Latent Traits of Item Response Models |

2014-07-28 | pryr | Tools for computing on the language |

2014-07-28 | RJSONIO | Serialize R objects to JSON, JavaScript Object Notation |

2014-07-28 | rYoutheria | Access to the YouTheria mammal trait database |

2014-07-27 | GrapheR | A multi-platform GUI for drawing customizable graphs in R |

2014-07-27 | migest | Useful R code for the Estimation of Migration |

2014-07-26 | dcmr | Attribute profile estimation using Diagnostic Classification Models and MCMC |

2014-07-26 | DiscML | DiscML: An R package for estimating evolutionary rates of discrete characters using maximum likelihood |

2014-07-26 | influence.SEM | Case Influence in Structural Equation Models |

2014-07-26 | infotheo | Information-Theoretic Measures |

2014-07-26 | stsm.class | Class and Methods for Structural Time Series Models |

2014-07-25 | animation | A gallery of animations in statistics and utilities to create animations |

2014-07-25 | AppliedPredictiveModeling | Functions and Data Sets for 'Applied Predictive Modeling' |

2014-07-25 | inTrees | Interpret Tree Ensembles |

2014-07-25 | nicheROVER | (Niche) (R)egion and Niche (Over)lap Metrics for Multidimensional Ecological Niches |

2014-07-25 | phylin | Spatial interpolation of genetic data |

2014-07-25 | quantregGrowth | Growth charts via regression quantiles |

2014-07-25 | Rankcluster | Model-based clustering for multivariate partial ranking data |

2014-07-25 | rngWELL | toolbox for WELL random number generators |

2014-07-25 | TreeSimGM | Simulating Phylogenetic Trees under a General Model |

2014-07-24 | imguR | Imgur API Client Package for R |

2014-07-24 | ManyTests | Multiple testing procedures of Cox (2011) and Wang and Cox (2007) |

2014-07-24 | mtk | Mexico ToolKit library (MTK) |

2014-07-24 | RItools | Randomization inference tools |

2014-07-24 | sensitivitymw | Sensitivity analysis using weighted M-statistics |

2014-07-24 | spuRs | Functions and Datasets for "Introduction to Scientific Programming and Simulation Using R" |

2014-07-24 | ssh.utils | Local and remote system commands with output and error capture |

2014-07-24 | tables | Formula-driven table generation |

2014-07-23 | CAvariants | Correspondence Analysis Variants |

2014-07-23 | Epi | A package for statistical analysis in epidemiology |

2014-07-23 | hglm.data | Data for The hglm Package |

2014-07-23 | hts | Hierarchical and grouped time series |

2014-07-23 | ReorderCluster | Reordering the dendrogram according to the class labels |

2014-07-23 | rnaseqWrapper | Wrapper for several R packages and scripts to automate RNA-seq analysis |

2014-07-22 | AdaptFitOS | Adaptive Semiparametric Regression with Simultaneous Confidence Bands |

2014-07-22 | babynames | US baby names 1880-2013 |

2014-07-22 | fueleconomy | EPA fuel economy data |

2014-07-22 | glasso | Graphical lasso- estimation of Gaussian graphical models |

2014-07-22 | kinship2 | Pedigree functions |

2014-07-22 | leapp | latent effect adjustment after primary projection |

2014-07-22 | MDPtoolbox | Markov Decision Processes toolbox |

2014-07-22 | mewAvg | A Fixed Memeory Moving Expanding Window Average |

2014-07-22 | nasaweather | Collection of datasets from the ASA 2006 data expo |

2014-07-22 | nontargetData | Quantized simulation data of isotope pattern centroids |

2014-07-22 | nycflights13 | Data about flights departing NYC in 2013 |

2014-07-22 | RMRAINGEN | RMRAINGEN (R Multi-site RAINfall GENeretor): a package to generate daily time series of rainfall from monthly mean values |

2014-07-22 | SPACECAP | A Program to Estimate Animal Abundance and Density using Bayesian Spatially-Explicit Capture-Recapture Models |

2014-07-22 | splusTimeDate | Times and Dates from S-PLUS |

2014-07-21 | BayesLogit | Logistic Regression |

2014-07-21 | densityClust | Clustering by fast search and find of density peaks |

2014-07-21 | gamm4 | Generalized additive mixed models using mgcv and lme4 |

2014-07-21 | GeoGenetix | Quantification of the effect of geographic versus environmental isolation on genetic differentiation |

2014-07-21 | ineq | Measuring Inequality, Concentration, and Poverty |

2014-07-21 | msme | Functions and Datasets for "Methods of Statistical Model Estimation" |

2014-07-21 | SASxport | Read and Write SAS XPORT Files |

2014-07-21 | SuperLearner | Super Learner Prediction |

2014-07-20 | coxinterval | Cox-type models for interval-censored data |

2014-07-20 | gWidgetstcltk | Toolkit implementation of gWidgets for tcltk package |

2014-07-20 | ProgGUIinR | support package for "Programming Graphical User Interfaces in R" |

2014-07-20 | SBRect | Detecting structural breaks using rectangle covering (non-parametric method) |

2014-07-19 | lme4 | Linear mixed-effects models using Eigen and S4 |

2014-07-19 | permGPU | permPGU: Using GPUs in Statistical Genomics |

2014-07-19 | RGtk2 | R bindings for Gtk 2.8.0 and above |

2014-07-19 | slp | Discrete Prolate Spheroidal (Slepian) Sequence Regression Smoothers |

2014-07-19 | TEQR | Target Equivalence Range Design |

2014-07-18 | bezier | Bezier Curve and Spline Toolkit |

2014-07-18 | cherry | Multiple testing methods for exploratory research |

2014-07-18 | fuzzyMM | Map Matching Using Fuzzy Logic |

2014-07-18 | mem | Moving Epidemic Method R Package |

2014-07-18 | sdcMicro | Statistical Disclosure Control methods for anonymization of microdata and risk estimation |

2014-07-18 | siRSM | Single-Index Response Surface Models |

2014-07-17 | mvcwt | Wavelet analysis of multiple time series |

2014-07-17 | nscancor | Non-Negative and Sparse CCA |

2014-07-17 | nsprcomp | Non-Negative and Sparse PCA |

2014-07-17 | randomForest | Breiman and Cutler's random forests for classification and regression |

2014-07-17 | RTDE | Robust Tail Dependence Estimation |

2014-07-16 | functional | Curry, Compose, and other higher-order functions |

2014-07-16 | GCAI.bias | Guided Correction Approach for Inherited bias (GCAI.bias) |

2014-07-16 | hillmakeR | Perform occupancy analysis |

2014-07-16 | ORCME | Order Restricted Clustering for Microarray Experiments |

2014-07-16 | PCovR | Principal Covariates Regression |

2014-07-16 | phaseR | Phase Plane Analysis of One and Two Dimensional Autonomous ODE Systems |

2014-07-16 | translate | Bindings for the Google Translate API v2 |

2014-07-15 | archdata | Example Datasets from Archaeological Research |

2014-07-15 | ParallelForest | Random Forest Classification with Parallel Computing |

2014-07-15 | quad | Exact permutation moments of quadratic form statistics |

2014-07-15 | ROSE | ROSE: Random Over-Sampling Examples |

2014-07-15 | synchrony | Methods for computing spatial, temporal, and spatiotemporal statistics |

2014-07-14 | enviPat | Isotope pattern, profile and centroid calculation for mass spectrometry |

2014-07-14 | FatTailsR | Power Hyperbolic Functions and Kiener Distributions |

2014-07-14 | IDPSurvival | Imprecise Dirichlet Process for Survival Analysis |

2014-07-14 | regress | Gaussian linear models with linear covariance structure |

2014-07-13 | pgmm | Parsimonious Gaussian mixture models |

2014-07-13 | QoLR | Analysis of Health-Related Quality of Life in oncology |

2014-07-13 | YuGene | YuGene: A simple approach to scale gene expression data derived from different platforms for integrated analyses |

2014-07-12 | IAT | Functions to use with data from the Implicit Association Test |

2014-07-12 | r4ss | R code for Stock Synthesis |

2014-07-11 | abc | Tools for Approximate Bayesian Computation (ABC) |

2014-07-11 | popKorn | For interval estimation of mean of selected populations |

2014-07-11 | refund.wave | Wavelet-Domain Regression with Functional Data |

2014-07-11 | robustlmm | Robust Linear Mixed Effects Models |

2014-07-11 | tth | TeX to HTML/MathML Translators tth/ttm |

2014-07-10 | CondReg | Condition Number Regularized Covariance Estimation |

2014-07-10 | COSINE | COndition SpecIfic sub-NEtwork |

2014-07-10 | metafolio | Metapopulation simulations for conserving salmon through portfolio optimization |

2014-07-10 | mvglmmRank | Multivariate Generalized Linear Mixed Models for Ranking Sports Teams |

2014-07-10 | pRSR | Test of periodicity using response surface regression |

2014-07-10 | robustvarComp | Robust Estimation of Variance Component Models |

2014-07-10 | rysgran | Grain size analysis, textural classifications and distribution of unconsolidated sediments |

2014-07-10 | StatMethRank | Statistical Methods for Ranking Data |

2014-07-10 | surv2sampleComp | Inference for model-free between-group parameters for censored survival data |

2014-07-09 | crossReg | Confidence intervals for crossover points of two simple regression lines |

2014-07-09 | DTR | Estimation and comparison of dynamic treatment regimes |

2014-07-09 | translateR | Bindings for the Google and Microsoft Translation APIs |

2014-07-09 | VideoComparison | Video comparison tool |

2014-07-08 | EvoRAG | Evolutionary Rates Across Gradients |

2014-07-08 | libamtrack | Computational routines for proton and ion radiotherapy |

2014-07-08 | RmixmodCombi | Combining Mixture Components for Clustering |

2014-07-08 | sievetest | Sieve test reporting functions |

2014-07-08 | sms | Spatial Microsimulation |

2014-07-07 | MCAvariants | Multiple Correspondence Analysis Variants |

2014-07-07 | plotSEMM | Graphing nonlinear latent variable interactions in SEMM |

2014-07-07 | readODS | Read ODS files and puts them into data frames |

2014-07-06 | rkvo | Read Key/Value Pair Observations |

2014-07-05 | eive | An algorithm for reducing errors-in-variable bias in simple linear regression |

2014-07-05 | ForIT | Functions from the 2nd Italian Forest Inventory (INFC) |

2014-07-05 | Thinknum | Thinknum Data Connection |

2014-07-05 | tm.plugin.factiva | Import articles from Factiva using the tm text mining framework |

2014-07-04 | CompGLM | Conway-Maxwell-Poisson GLM and distribution functions |

2014-07-04 | epi2loc | Epistatic and penetrance models for two-locus genetic interactions |

2014-07-04 | rinat | Access iNaturalist data through APIs |

2014-07-04 | SOD | SOD for multidimensional scaling |

2014-07-03 | Bayesianbetareg | Bayesian Beta regression: joint mean and precision modeling |

2014-07-03 | CarletonStats | Functions For Statistics Classes At Carleton College |

2014-07-03 | fwi.fbp | Fire Weather Index System and Fire Behaviour Prediction System Calculations |

2014-07-03 | mcc | Moment Corrected Correlation |

2014-07-03 | morse | MOdelling tools for Reproduction and Survival data in Ecotoxicology |

2014-07-03 | movMF | Mixtures of von Mises-Fisher Distributions |

2014-07-03 | qualCI | Causal Inference with Qualitative and Ordinal Information on Outcomes |

2014-07-02 | FunctionalNetworks | An algorithm for gene and gene set network inference |

2014-07-02 | hSDM | hierarchical Bayesian species distribution models |

2014-07-02 | LogConcDEAD | Log-concave Density Estimation in Arbitrary Dimensions |

2014-07-02 | MAVTgsa | Three methods to identify differentially expressed gene sets, ordinary least square test, Multivariate Analysis Of Variance test with n contrasts and Random forest |

2014-07-02 | PolyPatEx | Paternity exclusion in autopolyploid species |

2014-07-02 | PSAboot | Bootstrapping for Propensity Score Analysis |

2014-07-02 | sads | Maximum Likelihood Models for Species Abundance Distributions |

2014-07-02 | spatial.tools | R functions for working with spatial data |

2014-07-02 | SpatialTools | Tools for spatial data analysis |

2014-07-02 | spd | Semi Parametric Distribution |

2014-07-01 | Rcplex | R interface to CPLEX |

2014-07-01 | scoring | Proper scoring rules |

2014-07-01 | subsemble | An Ensemble Method for Combining Subset-Specific Algorithm Fits |

2014-07-01 | sudoku | Sudoku Puzzle Generator and Solver |

2014-06-30 | CORM | The Clustering of Regression Models Method |

2014-06-30 | diskmemoiser | Disk Memoisation For R |

2014-06-30 | GenBinomApps | Clopper-Pearson Confidence Interval and Generalized Binomial Distribution |

2014-06-30 | groc | Generalized Regression on Orthogonal Components |

2014-06-30 | rmgarch | Multivariate GARCH models |

2014-06-30 | rococo | RObust rank COrrelation COefficient and test |

2014-06-30 | stressr | Fetch and plot financial stress index and component data |

2014-06-30 | subplex | Subplex optimization algorithm |

2014-06-29 | BANOVA | Hierarchical Bayesian ANOVA Models |

2014-06-28 | np | Nonparametric kernel smoothing methods for mixed data types |

2014-06-28 | refund | Regression with Functional Data |

2014-06-28 | stosim | Stochastic Simulator for Reliability Modeling of Repairable Systems |

2014-06-27 | cond | Approximate conditional inference for logistic and loglinear models |

2014-06-27 | icensmis | Study Design and Data Analysis in the presence of error-prone diagnostic tests and self-reported outcomes |

2014-06-27 | rforensicbatwing | BATWING for calculating forensic trace-suspect match probabilities |

2014-06-27 | STEPCAM | ABC-SMC inference of the STEPCAM model |

2014-06-26 | base64enc | Tools for base64 encoding |

2014-06-26 | beepr | Easily Play Notification Sounds on any Platform |

2014-06-26 | Cairo | R graphics device using cairo graphics library for creating high-quality bitmap (PNG, JPEG, TIFF), vector (PDF, SVG, PostScript) and display (X11 and Win32) output |

2014-06-26 | CovSel | Model-Free Covariate Selection |

2014-06-26 | dgmb | dgmb Simulating data for PLS structural models |

2014-06-26 | ezsim | provide an easy to use framework to conduct simulation |

2014-06-26 | pedigreemm | Pedigree-based mixed-effects models |

2014-06-26 | RelValAnalysis | Relative Value Analysis |

2014-06-26 | sp23design | Design and Simulation of seamless Phase II-III Clinical Trials |

2014-06-25 | antitrust | Antitrust Library |

2014-06-25 | changepoint | An R package for changepoint analysis |

2014-06-25 | dagbag | Learning directed acyclic graphs (DAGs) through bootstrap aggregating |

2014-06-25 | GB2 | Generalized Beta Distribution of the Second Kind: properties, likelihood, estimation |

2014-06-25 | ngram | An n-gram Babbler |

2014-06-25 | nlsMicrobio | Nonlinear regression in predictive microbiology |

2014-06-25 | SocialMediaMineR | A Social Media Search and Analytic Tool |

2014-06-24 | bingat | Binary Graph Analysis Tools |

2014-06-24 | bst | Gradient Boosting |

2014-06-24 | bujar | Buckley-James Regression for Survival Data with High-Dimensional Covariates |

2014-06-24 | EasyStrata | Evaluation of stratified genome-wide association meta-analysis results |

2014-06-24 | FisHiCal | Iterative FISH-based Calibration of Hi-C Data |

2014-06-24 | goftest | Classical Goodness-of-Fit Tests for Univariate Distributions |

2014-06-24 | InventorymodelPackage | Inventorymodel |

2014-06-24 | LS2Wstat | A Multiscale Test of Spatial Stationarity for LS2W processes |

2014-06-24 | matlab | MATLAB emulation package |

2014-06-24 | optR | Optimization Toolbox for solving linear systems |

2014-06-24 | pedgene | Gene-level statistics for Pedigree Data |

2014-06-24 | RWBP | Detects spatial outliers using a Random Walk on Bipartite Graph |

2014-06-24 | rwt | Rice Wavelet Toolbox wrapper |

2014-06-24 | sampleSelection | Sample Selection Models |

2014-06-24 | weatherData | Get Weather Data from the Web |

2014-06-23 | GPvam | Maximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling |

2014-06-23 | rClinicalCodes | R tools for integrating with the www.clinicalcodes.org repository |

2014-06-22 | eegAnalysis | Tools for analysis and classification of electroencephalography (EEG) data |

2014-06-22 | mded | Measuring the difference between two empirical distributions |

2014-06-22 | pbdNCDF4 | Programming with Big Data – Interface to Parallel Unidata NetCDF4 Format Data Files |

2014-06-22 | support.BWS | Basic functions for supporting an implementation of best-worst scaling |

2014-06-22 | support.CEs | Basic functions for supporting an implementation of choice experiments |

2014-06-22 | TaoTeProgramming | Illustrations from Tao Te Programming |

2014-06-21 | aemo | Download and process AEMO price and demand data |

2014-06-21 | bcpmeta | Bayesian Multiple Changepoint Detection Using Metadata |

2014-06-21 | ConnMatTools | Tools for working with connectivity matrices |

2014-06-21 | copulaedas | Estimation of Distribution Algorithms Based on Copulas |

2014-06-21 | funreg | funreg (Functional Regression for Irregularly Timed Data) |

2014-06-20 | nadiv | Functions to construct (non)additive genetic relatedness matrices and facilitate animal model analyses |

2014-06-20 | parallelMCMCcombine | Methods for combining independent subset Markov chain Monte Carlo (MCMC) posterior samples to estimate a posterior density given the full data set |

2014-06-19 | CommunityCorrelogram | Ecological Community Correlogram |

2014-06-19 | hazus | Damage functions from FEMA's HAZUS software for use in modeling financial losses from natural disasters |

2014-06-18 | fmri | Analysis of fMRI experiments |

2014-06-18 | iGasso | Genetic association tests and utilities |

2014-06-18 | localsolver | R API to LocalSolver |

2014-06-18 | OmicKriging | OmicKriging for Phenotypic Prediction |

2014-06-17 | clogitL1 | Fitting exact conditional logistic regression with lasso and elastic net penalties |

2014-06-17 | cmprsk | Subdistribution Analysis of Competing Risks |

2014-06-17 | KernSmoothIRT | Nonparametric Item Response Theory |

2014-06-17 | pmml | Generate PMML for various models |

2014-06-17 | pmmlTransformations | Transforms input data from a PMML perspective |

2014-06-17 | tictoc | Functions for timing R scripts, as well as implementations of Stack and List structures |

2014-06-17 | TreatmentSelection | Evaluate Treatment Selection Biomarkers |

2014-06-16 | arnie | "Arnie" box office records 1982-2014 |

2014-06-16 | nat.utils | File System Utility Functions for NeuroAnatomy Toolbox |

2014-06-16 | Rglpk | R/GNU Linear Programming Kit Interface |

2014-06-16 | RI2by2 | Randomization inference for treatment effects on a binary outcome |

2014-06-15 | installr | Using R to install stuff (such as: R, Rtools, RStudio, git, and more!) |

2014-06-15 | NLPutils | Natural Language Processing Utilities |

2014-06-15 | RSKC | Robust sparse K-means |

2014-06-15 | tm.plugin.dc | Text Mining Distributed Corpus Plug-In |

2014-06-15 | xhmmScripts | XHMM R scripts |

2014-06-14 | babel | Ribosome profiling data analysis |

2014-06-14 | rbitcoinchartsapi | R Package for the BitCoinCharts.com API |

2014-06-14 | table1xls | Produces summary tables and exports them to multi-tab spreadsheet format (.xls or .xlsx) |

2014-06-13 | AssetPricing | Optimal pricing of assets with fixed expiry date |

2014-06-13 | DeducerText | Deducer GUI for Text Data |

2014-06-13 | ElstonStewart | Elston-Stewart Algorithm |

2014-06-13 | ESGtoolkit | Toolkit for the simulation of financial assets and interest rates models |

2014-06-13 | PCDSpline | Semiparametric regression analysis of panel count data using monotone splines |

2014-06-13 | pROC | display and analyze ROC curves |

2014-06-13 | ReliabilityTheory | Tools for structural reliability analysis |

2014-06-13 | s2dverification | Set of common tools for model diagnostics |

2014-06-13 | wordcloud | Word Clouds |

2014-06-12 | apsimr | Edit, run and evaluate APSIM simulations from R easily |

2014-06-12 | clustMD | Model based clustering for mixed data |

2014-06-12 | CopyDetect | Computing Statistical Indices to Detect Answer Copying on Multiple-Choice Tests |

2014-06-12 | faraway | Functions and datasets for books by Julian Faraway |

2014-06-12 | flip | Multivariate Permutation Tests |

2014-06-12 | qVarSel | Variables Selection for Clustering and Classification |

2014-06-12 | RXMCDA | An XMCDA parser for R |

2014-06-12 | ustyc | Fetch US Treasury yield curve data |

2014-06-12 | yaml | Methods to convert R data to YAML and back |

2014-06-11 | mice | Multivariate Imputation by Chained Equations |

2014-06-11 | R.cache | Fast and light-weight caching (memoization) of objects and results to speed up computations |

2014-06-11 | tm | Text Mining Package |

2014-06-11 | tm.plugin.alceste | Import texts from files in the Alceste format using the tm text mining framework |

2014-06-11 | tm.plugin.mail | Text Mining E-Mail Plug-In |

2014-06-11 | topicmodels | Topic models |

2014-06-10 | evolvability | Calculation of evolvability parameters |

2014-06-10 | gsmoothr | Smoothing tools |

2014-06-10 | HiCseg | Detection of domains in HiC data |

2014-06-10 | ICsurv | A package for semiparametric regression analysis of interval-censored data |

2014-06-10 | ORCI | Several confidence intervals for the odds ratio |

2014-06-10 | popdemo | Provides Tools For Demographic Modelling Using Projection Matrices |

2014-06-10 | qmap | Statistical transformations for post-processing climate model output |

2014-06-10 | rlme | Rank-based Estimation and Prediction in Random Effects Nested Models |

2014-06-10 | SCI | Standardized Climate Indices such as SPI, SRI or SPEI |

2014-06-09 | EBEN | Empirical Bayesian Elastic Net |

2014-06-09 | IsoCI | Confidence intervals for current status data based on transformations and bootstrap |

2014-06-09 | MCMCglmm | MCMC Generalised Linear Mixed Models |

2014-06-09 | pgirmess | Data analysis in ecology |

2014-06-09 | primerTree | primerTree |

2014-06-08 | synlik | Synthetic Likelihood methods for intractable likelihoods |

2014-06-07 | compositions | Compositional Data Analysis |

2014-06-07 | Cubist | Rule- and Instance-Based Regression Modeling |

2014-06-07 | genasis | Global ENvironmental ASsessment Information System (GENASIS) computational tools |

2014-06-07 | hoardeR | hoardeR package |

2014-06-07 | Interact | Tests for marginal interactions in a 2 class response model |

2014-06-07 | kobe | Tools for the provision of scientific fisheries management advice |

2014-06-07 | PortRisk | Portfolio Risk Analysis |

2014-06-07 | Rmalschains | Continuous Optimization using Memetic Algorithms with Local Search Chains (MA-LS-Chains) in R |

2014-06-06 | BEST | Bayesian Estimation Supersedes the t-Test |

2014-06-06 | equivalence | Provides tests and graphics for assessing tests of equivalence |

2014-06-06 | memgene | Spatial pattern detection in genetic distance data using Moran's Eigenvector Maps |

2014-06-06 | tweedie | Tweedie exponential family models |

2014-06-05 | AR1seg | Segmentation of an autoregressive Gaussian process of order 1 |

2014-06-05 | diffIRT | Diffusion IRT models for Response and Response Time Data |

2014-06-05 | SpatialEpi | Methods and Data for Spatial Epidemiology |

2014-06-05 | vbsr | Variational Bayes Spike Regression Regularized Linear Models |

2014-06-04 | agRee | Various Methods for Measuring Agreement |

2014-06-04 | ChargeTransport | Charge Transfer Rates and Charge Carrier Mobilities |

2014-06-04 | GIGrvg | Random variate generator for the GIG distribution |

2014-06-04 | kequate | The kernel method of test equating |

2014-06-04 | rsdepth | Ray Shooting Depth (i.e. RS Depth) functions for bivariate analysis |

2014-06-04 | sas7bdat | SAS Database Reader (experimental) |

2014-06-04 | sybil | sybil - Efficient Constrained Based Modelling in R |

2014-06-03 | ebSNP | Genotyping and SNP calling using single-sample next generation sequencing data |

2014-06-03 | gstudio | Analyses and functions related to the spatial analysis of genetic marker data |

2014-06-03 | mapdata | Extra Map Databases |

2014-06-03 | popgraph | This is an R package that constructs and manipulates population graphs |

2014-06-02 | dissUtils | Utilities for making pairwise comparisons of multivariate data |

2014-06-02 | Mposterior | Mposterior: R package for Robust and Scalable Bayes via a Median of Subset Posterior Measures |

2014-06-02 | orloca | The package deals with Operations Research LOCational Analysis models |

2014-06-02 | rHealthDataGov | Retrieve data sets from the HealthData.gov data API |

2014-06-01 | aster | Aster Models |

2014-06-01 | rmetasim | An individual-based population genetic simulation environment |

2014-05-31 | lasso2 | L1 constrained estimation aka ‘lasso’ |

2014-05-31 | pbo | Probability of Backtest Overfitting |

2014-05-31 | ripa | R Image Processing and Analysis |

2014-05-31 | rplotengine | R as a plotting engine |

2014-05-31 | STPGA | Selection of Training Populations by Genetic Algorithm |

2014-05-31 | taRifx.geo | Collection of various spatial functions |

2014-05-30 | argparser | Command-line argument parser |

2014-05-30 | IBDsim | Simulation of chromosomal regions shared by family members |

2014-05-30 | interventionalDBN | Interventional Inference for Dynamic Bayesian Networks |

2014-05-30 | kdetrees | Nonparametric method for identifying discordant phylogenetic trees |

2014-05-30 | mstate | Data preparation, estimation and prediction in multi-state models |

2014-05-30 | qcr | Quality control and reliability |

2014-05-30 | RSGHB | Functions for Hierarchical Bayesian Estimation: A Flexible Approach |

2014-05-30 | SensitivityCaseControl | Sensitivity Analysis for Case-Control Studies |

2014-05-30 | wsrf | Weighted Subspace Random Forest |

2014-05-29 | bootruin | A bootstrap test for the probability of ruin in the classical risk process |

2014-05-29 | hamlet | Hierarchical Optimal Matching and Machine Learning Toolbox |

2014-05-29 | LearnBayes | Functions for Learning Bayesian Inference |

2014-05-29 | pairwise | Rasch Model Parameters by Pairwise Algorithm |

2014-05-29 | stargazer | LaTeX/HTML code and ASCII text for well-formatted regression and summary statistics tables |

2014-05-29 | taRifx | Collection of utility and convenience functions |

2014-05-28 | dostats | Compute statistics helper functions |

2014-05-28 | harvestr | A Parallel Simulation Framework |

2014-05-28 | ivlewbel | Uses heteroscedasticity to estimate mismeasured and endogenous regressor models |

2014-05-28 | ordBTL | Modelling comparison data with ordinal response |

2014-05-28 | seg | A set of tools for measuring spatial segregation |

2014-05-28 | SINGLE | Estimate sparse dynamic graphs using the Smooth Incremental Graphical Lasso Estimation (SINGLE) algorithm |

2014-05-27 | bbmle | Tools for general maximum likelihood estimation |

2014-05-27 | bmmix | Bayesian multinomial mixture |

2014-05-27 | bootLR | Bootstrapped confidence intervals for (negative) likelihood ratio tests |

2014-05-27 | DiceEval | Construction and evaluation of metamodels |

2014-05-27 | metagen | Inference in Meta Analysis and Meta Regression |

2014-05-26 | constrainedKriging | Constrained, covariance-matching constrained and universal point or block kriging |

2014-05-26 | PBD | Protracted birth-death model of diversification |

2014-05-26 | pbdPROF | Programming with Big Data — MPI Profiling Tools |

2014-05-26 | SRRS | The Stepwise Response Refinement Screener (SRRS) |

2014-05-24 | faoutlier | Influential case detection methods for factor analysis and SEM |

2014-05-23 | alphashape3d | Implementation of the 3D alpha-shape for the reconstruction of 3D sets from a point cloud |

2014-05-23 | lazyWeave | LaTeX Wrappers for R Users |

2014-05-23 | Modalclust | Hierarchical Modal Clustering |

2014-05-23 | OrgMassSpecR | Organic Mass Spectrometry |

2014-05-23 | rpart.utils | Tools for parsing and manipulating rpart objects, including generating machine readable rules |

2014-05-23 | tsbridge | Calculate normalising constants for Bayesian time series models |

2014-05-23 | ucbthesis | UC Berkeley graduate division thesis template |

2014-05-22 | BCE | Bayesian composition estimator: estimating sample (taxonomic) composition from biomarker data |

2014-05-22 | nmcdr | Non-parametric Multiple Change-points Detection |

2014-05-22 | treecm | Centre of mass assessment and consolidation of trees |

2014-05-21 | autoencoder | An implementation of sparse autoencoder for automatic learning of representative features from unlabeled data |

2014-05-21 | KRLS | Kernel-based Regularized Least squares (KRLS) |

2014-05-21 | monomvn | Estimation for multivariate normal and Student-t data with monotone missingness |

2014-05-21 | Rmpi | Interface (Wrapper) to MPI (Message-Passing Interface) |

2014-05-21 | spatial.gev.bma | Hierarchical spatial generalized extreme value (GEV) modeling with Bayesian Model Averaging (BMA) |

2014-05-21 | sybilSBML | SBML Integration in Package sybil |

2014-05-21 | Wats | Wrap Around Time Series graphics |

2014-05-20 | prefmod | Utilities to fit paired comparison models for preferences |

2014-05-20 | ResourceSelection | Resource Selection (Probability) Functions for Use-Availability Data |

2014-05-19 | cubfits | Codon Usage Bias Fits |

2014-05-19 | GRTo | Tools for the analysis of Gutenberg-Richter distributions of earthquake magnitudes |

2014-05-19 | hawkes | Hawkes process simulation and calibration toolkit |

2014-05-19 | MASSTIMATE | Body Mass Estimation Equations for Vertebrates |

2014-05-19 | oce | Analysis of Oceanographic data |

2014-05-19 | PVAClone | Population Viability Analysis with Data Cloning |

2014-05-19 | qlcMatrix | Utility sparse matrix functions for Quantitative Language Comparison |

2014-05-19 | sharx | Models and Data Sets for the Study of Species-Area Relationships |

2014-05-18 | cladoRcpp | C++ implementations of phylogenetic cladogenesis calculations |

2014-05-18 | cstar | Substantive significance testing for regression estimates and marginal effects |

2014-05-18 | Hankel | Univariate non-parametric two-sample test based on empirical Hankel transforms |

2014-05-18 | MC2toPath | Translates information from netcdf files with MC2 output into inter-PVT transitions |

2014-05-18 | robust | Robust Library |

2014-05-17 | boostr | A modular framework to bag or boost any estimation procedure |

2014-05-17 | gambin | Fit the GamBin model to species abundance distributions |

2014-05-17 | micEconAids | Demand Analysis with the Almost Ideal Demand System (AIDS) |

2014-05-17 | pmr | Probability Models for Ranking Data |

2014-05-16 | bigrf | Big Random Forests: Classification and Regression Forests for Large Data Sets |

2014-05-16 | detect | Analyzing Wildlife Data with Detection Error |

2014-05-16 | dynia | Fit Dynamic Intervention Model |

2014-05-16 | FGN | Fractional Gaussian Noise and power law decay time series model fitting |

2014-05-16 | geiger | Analysis of evolutionary diversification |

2014-05-16 | mefa4 | Multivariate Data Handling with S4 Classes and Sparse Matrices |

2014-05-16 | mvctm | Multivariate Variance Components Tests for Multilevel Data |

2014-05-16 | pbapply | Adding Progress Bar to '*apply' Functions |

2014-05-16 | PBSddesolve | Solver for Delay Differential Equations |

2014-05-16 | QRM | Provides R-language Code to Examine Quantitative Risk Management Concepts |

2014-05-16 | Skillings.Mack | The Skillings-Mack test Statistic for block designs with missing observations |

2014-05-15 | DoubleExpSeq | Differential Exon Usage Test for RNA-Seq data via Empirical Bayes Shrinkage of the Dispersion Parameter |

2014-05-14 | ALDqr | Quantile Regression Using Asymmetric Laplace Distribution |

2014-05-14 | erpR | Event-related potentials (ERP) analysis, graphics and utility functions |

2014-05-14 | hydroApps | Tools and models for hydrological applications |

2014-05-14 | imputeR | A General Imputation Framework in R |

2014-05-14 | LogisticDx | Diagnostic tests for logistic regression models |

2014-05-14 | phyloTop | Phylogenetic Tree Topological Properties Evaluator |

2014-05-14 | pkgmaker | Package development utilities |

2014-05-14 | rvHPDT | Calling haplotype-based and variant-based pedigree disequilibrium test for rare variants in pedigrees |

2014-05-14 | shp2graph | Convert a SpatialLinesDataFrame object to a "igraph-class" object |

2014-05-13 | adegenet | adegenet: an R package for the exploratory analysis of genetic and genomic data |

2014-05-13 | cutoffR | CUTOFF: A Spatio-temporal Imputation Method |

2014-05-13 | dynatopmodel | Implementation of the Dynamic TOPMODEL hydrological model |

2014-05-13 | emdatr | Global Disaster Losses from the EMDAT database Using R |

2014-05-13 | nplr | N-Parameter Logistic Regression |

2014-05-13 | samplingEstimates | Sampling Estimates |

2014-05-13 | samplingVarEst | Sampling Variance Estimation |

2014-05-12 | finiteruinprob | Computation of the probability of ruin within a finite time horizon |

2014-05-12 | stilt | Separable Gaussian Process Interpolation (Emulation) |

2014-05-12 | VSURF | Variable Selection Using Random Forests |

2014-05-11 | siplab | Spatial individual-plant modelling |

2014-05-11 | TFMPvalue | Efficient and accurate P-value computation for Position Weight Matrices |

2014-05-10 | recalls | Access U.S. Federal Government Recall Data |

2014-05-10 | rSCA | An R Package for Stepwise Cluster Analysis |

2014-05-09 | akmeans | Adaptive Kmeans algorithm based on threshold |

2014-05-09 | DiceDesign | Designs of Computer Experiments |

2014-05-09 | msap | Statistical analysis for Methylation-sensitive Amplification Polymorphism data |

2014-05-08 | fishMod | Fits Poisson-sum-of-Gammas GLMs, Tweedie GLMs, and delta log-normal mdoels |

2014-05-08 | iRepro | Reproducibility for Interval-Censored Data |

2014-05-08 | PPtree | Projection pursuit classification tree |

2014-05-08 | ProfessR | Grades Setting and Exam Maker |

2014-05-08 | psgp | Projected Spatial Gaussian Process (psgp) methods |

2014-05-08 | rbundler | Rbundler manages an application's dependencies systematically and repeatedly |

2014-05-08 | Rwave | Time-Frequency analysis of 1-D signals |

2014-05-08 | slfm | Tools for fitting sparse latent factor model |

2014-05-07 | bdvis | Biodiversity Data Visualizations |

2014-05-07 | BlakerCI | Blaker's binomial confidence limits |

2014-05-07 | CALIBERrfimpute | Multiple imputation using MICE and Random Forest |

2014-05-07 | CollocInfer | Collocation Inference for Dynamic Systems |

2014-05-07 | Dominance | ADI (average dominance index), social network graphs with dual directions, and music notation graph |

2014-05-07 | freestats | Statistical algorithms used in common data mining course |

2014-05-07 | futile.matrix | Random matrix generation and manipulation |

2014-05-07 | genSurv | Generating multi-state survival data |

2014-05-07 | glm2 | Fitting Generalized Linear Models |

2014-05-07 | gplm | Generalized partial linear models (GPLM) |

2014-05-07 | metap | Meta-analysis of significance values |

2014-05-07 | noncensus | U.S. Census Regional and Demographic Data |

2014-05-07 | ocedata | Oceanographic datasets for Oce |

2014-05-07 | PCGSE | Principal Component Gene Set Enrichment |

2014-05-07 | tawny | Provides various portfolio optimization strategies including random matrix theory and shrinkage estimators |

2014-05-06 | bandit | Functions for simple A/B split test and multi-armed bandit analysis |

2014-05-06 | FLR | Fuzzy Logic Rule Classifier |

2014-05-06 | HHG | Heller-Heller-Gorfine Tests of Independence |

2014-05-06 | KappaV | Calculates "vectorial Kappa", an index of congruence between patchy mosaics |

2014-05-06 | networkreporting | Tools for using network reporting estimators |

2014-05-06 | RcmdrPlugin.MPAStats | R Commander Plug-in for MPA Statistics |

2014-05-06 | tawny.types | Common types for tawny |

2014-05-06 | VBmix | Variational Bayesian mixture models |

2014-05-05 | dams | Dams in the United States from the National Inventory of Dams (NID) |

2014-05-05 | MCMC.OTU | Bayesian analysis of multivariate counts data |

2014-05-05 | polyclip | Polygon Clipping |

2014-05-05 | truncSP | Semi-parametric estimators of truncated regression models |

2014-05-05 | wtcrsk | Competing risks regression models with covariate-adjusted censoring weight |

2014-05-04 | endorse | R Package for Analyzing Endorsement Experiments |

2014-05-04 | hydrogeo | Groundwater data presentation and interpretation |

2014-05-03 | sglr | An R package for power and boundary calculations in pre-licensure vaccine trials using a sequential generalized likelihood ratio test |

2014-05-03 | spatialprobit | Spatial Probit Models |

2014-05-02 | BalancedSampling | Balanced and spatially balanced sampling |

2014-05-02 | benchmark | Benchmark Experiments Toolbox |

2014-05-02 | GeneFeST | Bayesian calculation of gene-specific FST from genomic SNP data |

2014-05-02 | HK80 | Conversion Tools for HK80 Geographical Coordinate System |

2014-05-02 | irtProb | Utilities and Probability Distributions Related to Multidimensional Person Item Response Models |

2014-05-02 | NominalLogisticBiplot | Biplot representations of categorical data |

2014-05-02 | rcppbugs | R binding for cppbugs |

2014-05-02 | RcppSMC | Rcpp bindings for Sequential Monte Carlo |

2014-05-01 | benford.analysis | Benford Analysis for data validation and forensic analytics |

2014-05-01 | dynsurv | Dynamic models for survival data |

2014-05-01 | JM | Joint Modeling of Longitudinal and Survival Data |

2014-05-01 | MultiCNVDetect | Multiple Copy Number Variation Detection |

2014-05-01 | nplplot | Plotting linkage and association results |

2014-05-01 | ocean | Biophysical Oceanography Tools |

2014-05-01 | PTE | Personalized Treatment Evaluator |

2014-04-30 | CMPControl | Control Charts for Conway-Maxwell-Poisson Distribution |

2014-04-30 | DAAG | Data Analysis And Graphics data and functions |

2014-04-30 | Deducer | Deducer: A data analysis GUI for R |

2014-04-30 | lar | History of labour relations package |

2014-04-30 | PBC | Product of Bivariate Copulas (PBC) |

2014-04-30 | pdfCluster | Cluster analysis via nonparametric density estimation |

2014-04-30 | robustHD | Robust methods for high-dimensional data |

2014-04-30 | SoilR | Models of Soil Organic Matter Decomposition |

2014-04-29 | bayesDem | Graphical User Interface for bayesTFR, bayesLife and bayesPop |

2014-04-29 | bbefkr | Bayesian bandwidth estimation and semi-metric selection for the functional kernel regression with unknown error density |

2014-04-29 | fastclime | A fast solver for parameterized lp problems and constrained l1 minimization approach to sparse precision matrix estimation |

2014-04-29 | hierNet | A Lasso for Hierarchical Interactions |

2014-04-29 | MBA | Multilevel B-spline Approximation |

2014-04-29 | mpoly | Symbolic computation and more with multivariate polynomials |

2014-04-29 | uniReg | Unimodal penalized spline regression using B-splines |

2014-04-28 | EasyMARK | Utility functions for working with mark-recapture data |

2014-04-28 | GGEBiplotGUI | GGEBiplotGUI: Interactive GGE Biplots in R |

2014-04-28 | maSAE | Mandallaz' model-assisted small area estimators |

2014-04-28 | mcheatmaps | Multiple matrices heatmap visualization |

2014-04-28 | pxR | PC-Axis with R |

2014-04-28 | TcGSA | Time-course Gene Set Analysis |

2014-04-28 | tvm | Time Value of Money Functions |

2014-04-27 | plusser | A Google+ Interface for R |

2014-04-27 | QCA3 | Yet another package for Qualitative Comparative Analysis |

2014-04-26 | HistData | Data sets from the history of statistics and data visualization |

2014-04-26 | Rpdb | Read, write, visualize and manipulate PDB files |

2014-04-25 | chemCal | Calibration functions for analytical chemistry |

2014-04-25 | DandEFA | Dandelion Plot for R-mode Exploratory Factor Analysis |

2014-04-25 | DynClust | Denoising and clustering for dynamical image sequence (2D or 3D)+T |

2014-04-25 | flux | Flux rate calculation from dynamic closed chamber measurements |

2014-04-25 | ICEbox | Individual Conditional Expectation Plot Toolbox |

2014-04-25 | predfinitepop | Predictive Inference on Totals and Averages of Finite Populations Segmented in Planned and Unplanned Domains |

2014-04-25 | RSvgDevice | An R SVG graphics device |

2014-04-24 | binhf | Haar-Fisz functions for binomial data |

2014-04-24 | clusterfly | Explore clustering interactively using R and GGobi |

2014-04-24 | EvCombR | Evidence Combination in R |

2014-04-24 | falcon | Finding Allele-specific Copy Number in Next-Generation Sequencing Data |

2014-04-24 | MILC | MIcrosimulation Lung Cancer (MILC) model |

2014-04-24 | polywog | Bootstrapped Basis Regression with Oracle Model Selection |

2014-04-24 | rggobi | Interface between R and GGobi |

2014-04-24 | rpubchem | rpubchem - Interface to the PubChem Collection |

2014-04-24 | sand | Statistical Analysis of Network Data with R |

2014-04-24 | SurvRegCensCov | Weibull Regression for a Right-Censored Endpoint with Interval-Censored Covariate |

2014-04-23 | classifly | Explore classification models in high dimensions |

2014-04-23 | meifly | Interactive model exploration using GGobi |

2014-04-23 | micEconCES | Analysis with the Constant Elasticity of Substitution (CES) function |

2014-04-23 | packHV | A few useful functions for statisticians |

2014-04-23 | reshape | Flexibly reshape data |

2014-04-23 | SNPassoc | SNPs-based whole genome association studies |

2014-04-22 | apmsWAPP | Pre- and Postprocessing for AP-MS data analysis based on spectral counts |

2014-04-22 | Bchron | Radiocarbon dating, age-depth modelling, relative sea level rate estimation, and non-parametric phase modelling |

2014-04-22 | crackR | Probabilistic damage tolerance analysis for fatigue cracking of metallic aerospace structures |

2014-04-22 | DIFlasso | A penalty approach to Differential Item Functioning in Rasch Models |

2014-04-22 | dynamicTreeCut | Methods for detection of clusters in hierarchical clustering dendrograms |

2014-04-22 | igraph | Network analysis and visualization |

2014-04-22 | IQCC | Improved Quality Control Charts |

2014-04-22 | kcirt | k-Cube Thurstonian IRT Models |

2014-04-22 | ltmle | Longitudinal Targeted Maximum Likelihood Estimation |

2014-04-22 | memoise | Memoise functions |

2014-04-22 | micEcon | Microeconomic Analysis and Modelling |

2014-04-22 | micEconSNQP | Symmetric Normalized Quadratic Profit Function |

2014-04-22 | polyapost | Simulating from the Polya posterior |

2014-04-22 | profr | An alternative display for profiling information |

2014-04-22 | quipu | Summary charts of micro satellite profiles for a set of biological samples |

2014-04-22 | R2STATS | A GTK GUI for fitting and comparing GLM and GLMM in R |

2014-04-22 | scales | Scale functions for graphics |

2014-04-22 | sqlshare | API for access to SQLShare database |

2014-04-21 | GSAgm | Gene Set Analysis using the Gamma Method |

2014-04-20 | kolmim | An improved evaluation of Kolmogorov's distribution |

2014-04-19 | RApiSerialize | R API Serialization |

2014-04-19 | Reol | R interface to the Encyclopedia of Life |

2014-04-19 | RTextureMetrics | Functions for calculation of texture metrics for Grey Level Co-occurrence Matrices |

2014-04-19 | rWBclimate | A package for accessing World Bank climate data |

2014-04-18 | AnthropMMD | A GUI for Mean Measures of Divergence |

2014-04-18 | bayesQR | Bayesian quantile regression |

2014-04-18 | Bclim | Bayesian Palaeoclimate Reconstruction from Pollen |

2014-04-18 | regRSM | Random Subspace Method (RSM) for linear regression |

2014-04-18 | SEERaBomb | SEER Setup and Use with A-Bomb Data |

2014-04-17 | ATmet | Advanced Tools for Metrology |

2014-04-17 | ModelMap | Creates Random Forest and Stochastic Gradient Boosting Models, and applies them to GIS .img files to build detailed prediction maps |

2014-04-17 | MSQC | Multivariate Statistical Quality Control |

2014-04-17 | poisson.glm.mix | Fit high dimensional mixtures of Poisson GLMs |

2014-04-16 | bigalgebra | BLAS routines for native R matrices and big.matrix objects |

2014-04-16 | GEVcdn | GEV conditional density estimation network |

2014-04-16 | mizer | Multi-species sIZE spectrum modelling in R |

2014-04-16 | PropCIs | Various confidence interval methods for proportions |

2014-04-16 | Rdpack | Update and manipulate Rd documentation objects |

2014-04-16 | simboot | Simultaneous inference for diversity indices |

2014-04-15 | Blaunet | Calculate and Analyze Blau statuses for measuring social distance |

2014-04-15 | Johnson | Johnson Transformation |

2014-04-15 | NBPSeq | Negative Binomial Models for RNA-Sequencing Data |

2014-04-15 | RGIFT | Create quizzes in GIFT Format |

2014-04-15 | scar | Shape-Constrained Additive Regression: a Maximum Likelihood Approach |

2014-04-15 | scio | Sparse Column-wise Inverse Operator |

2014-04-14 | AMORE | A MORE flexible neural network package |

2014-04-14 | DivE | Diversity Estimator |

2014-04-14 | LOGICOIL | LOGICOIL: multi-state prediction of coiled-coil oligomeric state |

2014-04-14 | pumilioR | Pumilio in R |

2014-04-13 | compound.Cox | Regression estimation based on the compound covariate method under the Cox proportional hazard model |

2014-04-13 | hydroPSO | Particle Swarm Optimisation, with focus on Environmental Models |

2014-04-13 | RcppBDT | Rcpp bindings for the Boost Date_Time library |

2014-04-13 | SensoMineR | Sensory data analysis with R |

2014-04-12 | BootPR | Bootstrap Prediction Intervals and Bias-Corrected Forecasting |

2014-04-12 | earlywarnings | Early Warning Signals Toolbox for Detecting Critical Transitions in Timeseries |

2014-04-12 | fastM | Fast Computation of Multivariate M-estimators |

2014-04-12 | Rcsdp | R interface to the CSDP semidefinite programming library |

2014-04-11 | foreach | Foreach looping construct for R |

2014-04-11 | gRapfa | Acyclic Probabilistic Finite Automata |

2014-04-11 | iterators | Iterator construct for R |

2014-04-11 | rvTDT | population control weighted rare-variants TDT |

2014-04-10 | archetypes | Archetypal Analysis |

2014-04-10 | dataview | Human readable data presentation |

2014-04-10 | gam | Generalized Additive Models |

2014-04-10 | grt | General Recognition Theory |

2014-04-10 | ora | Convenient Tools for Working with Oracle Databases |

2014-04-09 | bit | A class for vectors of 1-bit booleans |

2014-04-09 | bit64 | A S3 class for vectors of 64bit integers |

2014-04-09 | cuttlefish.model | An R package to perform LPUE standardization and stock assessment of the English Channel cuttlefish stock using a two-stage biomass model |

2014-04-09 | ff | memory-efficient storage of large data on disk and fast access functions |

2014-04-09 | GHQp | Gauss Hermite Quadrature with pruning |

2014-04-09 | metaLik | Likelihood inference in meta-analysis and meta-regression models |

2014-04-09 | PBSadmb | ADMB for R Using Scripts or GUI |

2014-04-09 | spsmooth | spsmooth: An Extension Package for 'mgcv' |

2014-04-09 | ThreeWay | Three-way component analysis |

2014-04-08 | bcrm | Bayesian continual reassessment method (CRM) designs for Phase I dose-finding trials |

2014-04-08 | coxphw | Weighted Estimation in Cox Regression |

2014-04-08 | EWGoF | Goodness-of-fit tests for the Exponential and two-parameter Weibull distributions |

2014-04-08 | smoothHR | Smooth Hazard Ratio Curves taking a Reference Value |

2014-04-08 | TSsql | Generic SQL helper functions for TSdbi SQL plugins |

2014-04-07 | disclap | Discrete Laplace Exponential Family |

2014-04-07 | MMS | Fixed effects Selection in Linear Mixed Models |

2014-04-07 | ncdf.tools | Easier ncdf file handling |

2014-04-07 | tuneR | Analysis of music and speech |

2014-04-06 | gdata | Various R programming tools for data manipulation |

2014-04-05 | acss.data | Data Only: Algorithmic Complexity of Short Strings (Computed via Coding Theorem Method) |

2014-04-05 | argparse | Command line optional and positional argument parser |

2014-04-05 | bbemkr | Bayesian bandwidth estimation for multivariate kernel regression with Gaussian error |

2014-04-05 | isotonic.pen | Penalized Isotonic Regression in one and two dimensions |

2014-04-05 | nonrandom | Stratification and matching by the propensity score |

2014-04-04 | aRpsDCA | Arps Decline Curve Analysis in R |

2014-04-04 | EcoHydRology | A community modeling foundation for Eco-Hydrology |

2014-04-04 | ERP | Significance analysis of Event-Related Potentials data |

2014-04-04 | fts | R interface to tslib (a time series library in c++) |

2014-04-04 | neuroim | neuroim: R software for reading, writing and representing brain imaging data |

2014-04-04 | palinsol | Insolation for palaeoclimate studies |

2014-04-04 | signal | Signal processing |

2014-04-03 | csampling | Functions for Conditional Simulation in Regression-Scale Models |

2014-04-03 | doRedis | Foreach parallel adapter for the rredis package |

2014-04-03 | findpython | Python tools to find an acceptable python binary |

2014-04-03 | JBTools | JBs tools and helper functions |

2014-04-03 | marg | Approximate marginal inference for regression-scale models |

2014-04-03 | Methplot | Visualize the methylation patterns |

2014-04-03 | nlreg | Higher Order Inference for Nonlinear Heteroscedastic Models |

2014-04-03 | pcg | Preconditioned Conjugate Gradient Algorithm for solving Ax=b |

2014-04-03 | rDVR | The rDVR package allows you to start stop and save a video server from within R |

2014-04-03 | TrackReconstruction | Reconstruct animal tracks from magnetometer, accelerometer, depth and optional speed data |

2014-04-02 | fifer | A collection of miscellaneous functions |

2014-04-02 | kimisc | Kirill's miscellaneous functions |

2014-04-02 | lpint | Local polynomial estimators of intensity function or its derivatives |

2014-04-02 | lsa | Latent Semantic Analysis |

2014-04-02 | mcmc | Markov Chain Monte Carlo |

2014-04-02 | OAIHarvester | Harvest Metadata Using OAI-PMH v2.0 |

2014-04-02 | potts | Markov Chain Monte Carlo for Potts Models |

2014-04-02 | rankhazard | Rank-hazard plots |

2014-04-02 | slam | Sparse Lightweight Arrays and Matrices |

2014-04-02 | ump | Uniformly Most Powerful Tests |

2014-04-01 | paramlink | Parametric linkage analysis in R |

2014-04-01 | tosls | Instrumental Variables Two Stage Least Squares estimation |

2014-03-31 | evdbayes | Bayesian Analysis in Extreme Value Theory |

2014-03-31 | geoscale | Geological timescale plot |

2014-03-31 | r2d2 | Bivariate (Two-Dimensional) Confidence Region and Frequency Distribution |

2014-03-31 | RImageJROI | Read ImageJ Region of Interest (ROI) files |

2014-03-31 | sparsediscrim | Sparse and Regularized Discriminant Analysis |

2014-03-31 | treemap | Treemap visualization |

2014-03-31 | WrightMap | Wright Map: IRT item-person map with ConQuest integration |

2014-03-30 | partsm | Periodic Autoregressive Time Series Models |

2014-03-30 | ptw | Parametric Time Warping |

2014-03-30 | rcdd | rcdd (Computational Geometry) |

2014-03-30 | trust | Trust Region Optimization |

2014-03-30 | TunePareto | Multi-objective parameter tuning for classifiers |

2014-03-28 | aCRM | Convenience functions for analytical Customer Relationship Management |

2014-03-28 | EMA | Easy Microarray data Analysis |

2014-03-28 | FacPad | Bayesian Sparse Factor Analysis model for the inference of pathways responsive to drug treatment |

2014-03-28 | fanovaGraph | Building Kriging models from FANOVA graphs |

2014-03-28 | FinTS | Companion to Tsay (2005) Analysis of Financial Time Series |

2014-03-28 | GraphPCA | GraphPCA, Graphical tools of histogram PCA |

2014-03-28 | invGauss | Threshold regression that fits the (randomized drift) inverse Gaussian distribution to survival data |

2014-03-28 | MMMS | Multi-Marker Molecular Signature for Treatment-specific Subgroup Identification |

2014-03-28 | pdmod | Proximal/distal modeling framework for Pavlovian conditioning phenomena |

2014-03-28 | pks | Probabilistic Knowledge Structures |

2014-03-28 | polyaAeppli | Implementation of the Polya-Aeppli distribution |

2014-03-27 | CDVine | Statistical inference of C- and D-vine copulas |

2014-03-27 | iFad | An integrative factor analysis model for drug-pathway association inference |

2014-03-27 | MetaSKAT | Meta analysis for SNP-set (Sequence) Kernel Association Test |

2014-03-27 | synchronicity | Boost mutex functionality for R |

2014-03-27 | TeachingSampling | Selection of samples and parameter estimation in finite population |

2014-03-26 | Rphylip | An R interface for PHYLIP |

2014-03-26 | SubLasso | Gene selection using Lasso for Microarray data with user-defined genes fixed in model |

2014-03-25 | cem | Coarsened Exact Matching |

2014-03-25 | clValid | Validation of Clustering Results |

2014-03-25 | CMF | Collective matrix factorization |

2014-03-25 | Devore7 | Data sets from Devore's "Prob and Stat for Eng (7th ed)" |

2014-03-25 | gRain | Graphical Independence Networks |

2014-03-25 | ivfixed | Instrumental fixed effect panel data model |

2014-03-25 | kml3d | K-means for joint Longitudinal data |

2014-03-25 | mcga | Machine coded genetic algorithms for real-valued optimization problems |

2014-03-24 | ccgarch | Conditional Correlation GARCH models |

2014-03-24 | CCpop | One and two locus GWAS of binary phenotype with case-control-population design |

2014-03-24 | kml | K-means for Longitudinal data |

2014-03-24 | lsdv | Least square dummy variable regression |

2014-03-24 | ouch | Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses |

2014-03-24 | OutlierDC | Outlier Detection using quantile regression for Censored Data |

2014-03-23 | freqparcoord | Novel Methods for Parallel Coordinates |

2014-03-23 | gRbase | A package for graphical modelling in R |

2014-03-23 | hybridEnsemble | Build, deploy and evaluate a Hybrid Ensemble |

2014-03-23 | kernelFactory | Kernel Factory: An ensemble of kernel Machines |

2014-03-22 | BiDimRegression | Calculates the bidimensional regression between two 2D configurations |

2014-03-22 | dna | Differential Network Analysis |

2014-03-22 | fbati | Gene by Environment Interaction and Conditional Gene Tests for Nuclear Families |

2014-03-22 | kintone | kintone REST client package for R |

2014-03-22 | RND | Risk Neutral Density Extraction Package |

2014-03-21 | caschrono | Séries temporelles avec R - Méthodes et cas |

2014-03-21 | MARSS | Multivariate Autoregressive State-Space Modeling |

2014-03-21 | PwrGSD | Power in a Group Sequential Design |

2014-03-21 | Rmixmod | An interface for MIXMOD |

2014-03-21 | Stack | Stylized concatenation of data.frames or ffdfs |

2014-03-20 | AmpliconDuo | Statistical Analysis Of Amplicon Data Of The Same Sample To Identify Artefacts |

2014-03-20 | deepnet | deep learning toolkit in R |

2014-03-20 | formula.tools | Utilities for working with formulas, expressions, calls and other R objects |

2014-03-20 | gIPFrm | Generalized Iterative Proportional Fitting for Relational Models |

2014-03-20 | koRpus | An R Package for Text Analysis |

2014-03-20 | longitudinalData | Longitudinal Data |

2014-03-20 | Paneldata | Linear models for panel data |

2014-03-20 | phylobase | Base package for phylogenetic structures and comparative data |

2014-03-20 | pspearman | Spearman's rank correlation test |

2014-03-19 | BIPOD | BIPOD (Bayesian Inference for Partially Observed diffusions) |

2014-03-19 | DBFTest | DBF test of no difference between groups |

2014-03-19 | fontcm | Computer Modern font for use with extrafont package |

2014-03-19 | geospacom | Helper package to facilitate the generation of distance matrices used in the package spacom |

2014-03-19 | PKreport | A reporting pipeline for checking population pharmacokinetic model assumption |

2014-03-19 | PoisNor | Simultaneous generation of multivariate data with Poisson and normal marginals |

2014-03-19 | resemble | Regression and similarity evaluation for memory-based learning in spectral chemometrics |

2014-03-18 | brainR | Helper functions to misc3d and rgl packages for brain imaging |

2014-03-18 | comato | Analysis of Concept Maps |

2014-03-18 | NMF | Algorithms and framework for Nonnegative Matrix Factorization (NMF) |

2014-03-18 | RSDA | RSDA - R to Symbolic Data Analysis |

2014-03-18 | tractor.base | A package for reading, manipulating and visualising magnetic resonance images |

2014-03-17 | date | Functions for handling dates |

2014-03-17 | EBS | Exact Bayesian Segmentation |

2014-03-17 | IPMpack | Builds and analyses Integral Projection Models (IPMs) |

2014-03-17 | Multiclasstesting | Performance of N-ary classification testing |

2014-03-17 | plot3Drgl | Plotting multi-dimensional data - using rgl |

2014-03-17 | polynom | A collection of functions to implement a class for univariate polynomial manipulations |

2014-03-17 | semiArtificial | Generator of semi-artificial data |

2014-03-17 | StatDataML | implementation of the StatDataML proposal |

2014-03-17 | uplift | Uplift Modeling |

2014-03-16 | blme | Bayesian Linear Mixed-Effects Models |

2014-03-16 | darch | Package for deep architectures and Restricted-Bolzmann-Machines |

2014-03-16 | dendextendRcpp | Faster dendrogram manipulation using Rcpp |

2014-03-16 | GEVStableGarch | ARMA-GARCH/APARCH models with GEV and stable distributions |

2014-03-15 | plot2groups | Plot scatter points for two groups of values |

2014-03-15 | sbioPN | sbioPN: Simulation of deterministic and stochastic spatial biochemical reaction networks using Petri Nets |

2014-03-15 | ssmrob | Robust estimation and inference in sample selection models |

2014-03-14 | gof | Model-diagnostics based on cumulative residuals |

2014-03-14 | pensim | Simulation of high-dimensional data and parallelized repeated penalized regression |

2014-03-14 | qtlnet | Causal Inference of QTL Networks |

2014-03-14 | rgauges | R wrapper to Gaug.es API |

2014-03-14 | solr | General purpose R interface to Solr |

2014-03-14 | ykmeans | K-means using a target variable |

2014-03-13 | doSNOW | Foreach parallel adaptor for the snow package |

2014-03-13 | PharmPow | Pharmacometric Power calculations for mixed study designs |

2014-03-12 | binomlogit | Efficient MCMC for Binomial Logit Models |

2014-03-12 | gmt | Interface between GMT Map-Making Software and R |

2014-03-12 | itertools | Iterator Tools |

2014-03-12 | LIStest | Tests of independence based on the Longest Increasing Subsequence |

2014-03-12 | MVA | An Introduction to Applied Multivariate Analysis with R |

2014-03-12 | normtest | Tests for Normality |

2014-03-12 | plotMCMC | MCMC Diagnostic Plots |

2014-03-12 | reportr | A general message and error reporting system |

2014-03-12 | scape | Statistical Catch-at-Age Plotting Environment |

2014-03-12 | sparsenet | Fit sparse linear regression models via nonconvex optimization |

2014-03-11 | bayesmix | Bayesian Mixture Models with JAGS |

2014-03-11 | MEMSS | Data sets from Mixed-effects Models in S |

2014-03-11 | mlmRev | Examples from Multilevel Modelling Software Review |

2014-03-11 | SASmixed | Data sets from "SAS System for Mixed Models" |

2014-03-10 | cplm | Compound Poisson linear models |

2014-03-10 | hqmisc | Miscellaneous convenience functions and dataset |

2014-03-10 | hrr | Horizontal rule for the R language |

2014-03-10 | metRology | Support for metrological applications |

2014-03-10 | MixMAP | Implements the MixMAP algorithm |

2014-03-10 | pt | Computational models for prospect theory and other theories of risky decision making |

2014-03-10 | relax | relax – R Editor for Literate Analysis and lateX |

2014-03-10 | ss3sim | Fisheries stock assessment simulation testing with Stock Synthesis |

2014-03-10 | XML2R | EasieR XML data collection |

2014-03-09 | BurStFin | Burns Statistics Financial |

2014-03-09 | gpairs | gpairs: The Generalized Pairs Plot |

2014-03-09 | gRapHD | Efficient selection of undirected graphical models for high-dimensional datasets |

2014-03-09 | regsubseq | Detect and Test Regular Sequences and Subsequences |

2014-03-09 | spatialsegregation | Segregation measures for multitype spatial point patterns |

2014-03-09 | tmle | Targeted Maximum Likelihood Estimation |

2014-03-08 | EnviroStat | Statistical analysis of environmental space-time processes |

2014-03-08 | ffbase | Basic statistical functions for package ff |

2014-03-08 | gSeg | Graph-Based Change-Point Detection (g-Segmentation) |

2014-03-07 | CPHshape | Find the maximum likelihood estimator of the shape constrained hazard baseline and the effect parameters in the Cox proportional hazards model |

2014-03-07 | doRNG | Generic Reproducible Parallel Backend for foreach Loops |

2014-03-07 | geneSignatureFinder | A Gene-signatures finder tools |

2014-03-07 | gptk | Gaussian Processes Tool-Kit |

2014-03-07 | Jmisc | Julian Miscellaneous Function |

2014-03-07 | Momocs | Shape Analysis of Outlines |

2014-03-07 | RMediation | An R Package for Mediation Analysis Confidence Intervals |

2014-03-07 | SixSigma | Six Sigma Tools for Quality and Process Improvement |

2014-03-07 | svd | Interfaces to various state-of-art SVD and eigensolvers |

2014-03-07 | svyPVpack | A package for complex surveys including plausible values |

2014-03-07 | VBLPCM | Variational Bayes Latent Position Cluster Model for networks |

2014-03-06 | bdpv | Inference and design for predictive values in binary diagnostic tests |

2014-03-06 | covreg | A simultaneous regression model for the mean and covariance |

2014-03-06 | eiwild | Ecological Inference with individual and aggregate data |

2014-03-06 | flowfield | Forecasts future values of a univariate time series |

2014-03-06 | mixRasch | Mixture Rasch Models with JMLE |

2014-03-06 | multiDimBio | Multivariate Analysis and Visualization for Biological Data |

2014-03-06 | MultiOrd | Generation of multivariate ordinal variates |

2014-03-06 | polySegratio | Simulate and test marker dosage for dominant markers in autopolyploids |

2014-03-06 | polySegratioMM | Bayesian mixture models for marker dosage in autopolyploids |

2014-03-06 | rngtools | Utility functions for working with Random Number Generators |

2014-03-06 | rrBLUP | Ridge regression and other kernels for genomic selection |

2014-03-05 | aws | Adaptive Weights Smoothing |

2014-03-05 | awsMethods | Class and Methods definitions for packages aws, adimpro, fmri, dwi |

2014-03-05 | bagRboostR | Ensemble bagging and boosting classifiers |

2014-03-05 | expectreg | Expectile and Quantile Regression |

2014-03-05 | FDRreg | False discovery rate regression |

2014-03-05 | gWidgets2 | Rewrite of gWidgets API for simplified GUI construction |

2014-03-05 | hbim | Hill/Bliss Independence Model for Combination Vaccines |

2014-03-05 | homals | Gifi Methods for Optimal Scaling |

2014-03-05 | inarmix | Mixture models for longitudinal count data |

2014-03-05 | picante | R tools for integrating phylogenies and ecology |

2014-03-05 | rebird | Interface to eBird |

2014-03-05 | StatRank | Statistical Rank Aggregation: Inference, Evaluation, and Visualization |

2014-03-04 | bigpca | PCA, transpose and multicore functionality for big.matrix objects |

2014-03-04 | bioPN | Simulation of deterministic and stochastic biochemical reaction networks using Petri Nets |

2014-03-04 | factorplot | factorplot |

2014-03-04 | insol | Solar Radiation |

2014-03-04 | ridge | Ridge Regression with automatic selection of the penalty parameter |

2014-03-04 | sesem | Spatially explicit structural equation modeling |

2014-03-04 | Table1Heatmap | Table 1 Heatmap |

2014-03-04 | tmvtnorm | Truncated Multivariate Normal and Student t Distribution |

2014-03-04 | weights | Weighting and Weighted Statistics |

2014-03-03 | bestglm | Best Subset GLM |

2014-03-03 | ICGE | Estimation of number of clusters and identification of atypical units |

2014-03-03 | parboost | Distributed Model-Based Boosting |

2014-03-03 | RADami | R Package for Phylogenetic Analysis of RADseq Data |

2014-03-03 | simFrame | Simulation framework |

2014-03-03 | SSsimple | State space models |

2014-03-03 | svIDE | SciViews GUI API - IDE and code editor functions |

2014-03-03 | widals | Weighting by Inverse Distance with Adaptive Least Squares for Massive Space-Time Data |

2014-03-02 | optimbase | R port of the Scilab optimbase module |

2014-03-02 | partitionMetric | Compute a distance metric between two partitions of a set |

2014-03-02 | pastecs | Package for Analysis of Space-Time Ecological Series |

2014-03-02 | SciViews | SciViews GUI API - Main package |

2014-03-02 | svDialogstcltk | SciViews GUI API - Dialog boxes using Tcl/Tk |

2014-03-02 | svGUI | SciViews GUI API - Functions to manage GUIs |

2014-03-02 | svHttp | SciViews GUI API - R HTTP server |

2014-03-02 | svMisc | SciViews GUI API - Miscellaneous functions |

2014-03-02 | svSocket | SciViews GUI API - R Socket Server |

2014-03-02 | svTools | SciViews GUI API - Tools (wrapper for packages tools and codetools) |

2014-03-02 | svUnit | SciViews GUI API - Unit testing |

2014-03-02 | svWidgets | SciViews GUI API - Widgets & Windows |

2014-03-02 | zooimage | Analysis of numerical zooplankton images |

2014-03-01 | aqr | Interface methods to use with an ActiveQuant Master Server |

2014-03-01 | BaSTA | A package for estimating age-specific survival from incomplete capture-recapture/recovery data |

2014-03-01 | CoImp | Copula based imputation method |

2014-03-01 | mcll | Monte Carlo Local Likelihood Estimation |

2014-02-28 | anchors | Statistical analysis of surveys with anchoring vignettes |

2014-02-28 | bPeaks | bPeaks: an intuitive peak-calling strategy to detect transcription factor binding sites from ChIP-seq data in small eukaryotic genomes |

2014-02-28 | doMC | Foreach parallel adaptor for the multicore package |

2014-02-28 | doParallel | Foreach parallel adaptor for the parallel package |

2014-02-28 | huge | High-dimensional Undirected Graph Estimation |

2014-02-28 | morgenstemning | Color schemes compatible with red-green color perception difficulties |

2014-02-28 | rpanel | Simple interactive controls for R using the tcltk library |

2014-02-27 | cts | Continuous Time Autoregressive Models |

2014-02-27 | GDELTtools | Download, slice, and normalize GDELT data |

2014-02-27 | isocir | Isotonic Inference for Circular data |

2014-02-27 | ndl | Naive Discriminative Learning |

2014-02-27 | panelAR | Estimation of Linear AR(1) Panel Data Models with Cross-Sectional Heteroskedasticity and/or Correlation |

2014-02-26 | ALKr | Generate Age-Length Keys for fish populations |

2014-02-26 | pencopula | Flexible Copula Density Estimation with Penalized Hierarchical B-Splines |

2014-02-26 | reutils | Talk to the NCBI EUtils |

2014-02-26 | rvgtest | Tools for Analyzing Non-Uniform Pseudo-Random Variate Generators |

2014-02-26 | scrypt | scrypt key derivation functions for R |

2014-02-26 | seas | Seasonal analysis and graphics, especially for climatology |

2014-02-26 | snp.plotter | snp.plotter |

2014-02-25 | CTT | Classical Test Theory Functions |

2014-02-25 | HMMpa | Analysing accelerometer data using hidden Markov models |

2014-02-25 | saemix | Stochastic Approximation Expectation Maximization (SAEM) algorithm |

2014-02-25 | SimuChemPC | Simulation process of 4 selection methods in predicting chemical potent compounds |

2014-02-25 | tspmeta | Instance feature calculation and evolutionary instance generation for the traveling salesman problem |

2014-02-24 | accrual | Bayesian Accrual Prediction |

2014-02-24 | biom | An interface package (beta) for the BIOM file format |

2014-02-24 | FinCal | Time Value of Money, time series analysis and Computational Finance |

2014-02-24 | fractaldim | Estimation of fractal dimensions |

2014-02-24 | gridBase | Integration of base and grid graphics |

2014-02-24 | GSM | Gamma Shape Mixture |

2014-02-24 | lmodel2 | Model II Regression |

2014-02-24 | msir | Model-based Sliced Inverse Regression |

2014-02-24 | MSwM | Fitting Markov Switching Models |

2014-02-24 | mvc | Multi-View Clustering |

2014-02-24 | pcrcoal | A package implementing the coalescent approach to PCR simulation developed by Weiss and von Haeseler (NAR, 1997) |

2014-02-24 | RegClust | Cluster analysis via regression coefficients |

2014-02-24 | RYoudaoTranslate | R package provide functions to translate English words into Chinese |

2014-02-24 | StableEstim | Estimate the 4 parameters of stable law using different methods |

2014-02-24 | tabplot | Tableplot, a visualization of large datasets |

2014-02-24 | tsfa | Time Series Factor Analysis |

2014-02-23 | eeptools | Convenience functions for education data |

2014-02-23 | EMMIXcontrasts | Contrasts in mixed effects for EMMIX model with random effects |

2014-02-23 | growcurves | Bayesian semi and nonparametric growth curve models that additionally include multiple membership random effects |

2014-02-23 | parma | Portfolio Allocation and Risk Management Applications |

2014-02-23 | psData | A package to download regularly maintained political science data sets and make commonly used, but infrequently updated variables based on this data |

2014-02-22 | blender | Analyze biotic homogenization of landscapes |

2014-02-22 | bursts | Markov model for bursty behavior in streams |

2014-02-22 | DSL | Distributed Storage and List |

2014-02-22 | hcci | Interval estimation for the parameters of linear models with heteroskedasticity (Wild Bootstrap) |

2014-02-22 | hive | Hadoop InteractiVE |

2014-02-22 | lavaan.survey | Complex survey Structural Equation Modeling (SEM) |

2014-02-22 | plumbr | Mutable and dynamic data models |

2014-02-21 | arf3DS4 | Activated Region Fitting, fMRI data analysis (3D) |

2014-02-21 | clere | CLERE methodology for simultaneous variables clustering and regression |

2014-02-21 | dynlm | Dynamic Linear Regression |

2014-02-21 | eulerian | eulerian: A package to find eulerian paths from graphs |

2014-02-21 | longCatEDA | Package for Plotting Categorical Longitudinal and Time-Series Data |

2014-02-21 | lpmodeler | Modeler for linear programs (LP) and mixed integer linear programs (MILP) |

2014-02-21 | ncdf4.helpers | Helper functions for use with the ncdf4 package |

2014-02-21 | RDieHarder | R interface to the dieharder RNG test suite |

2014-02-21 | SPAr | Perform rare variants association analysis based on summation of partition approaches |

2014-02-21 | treebase | An R package for discovery, access and manipulation of online phylogenies |

2014-02-21 | TTAinterfaceTrendAnalysis | Temporal Trend Analysis Graphical Interface |

2014-02-21 | zendeskR | Zendesk API Wrapper |

2014-02-20 | ARTP | Gene and Pathway p-values computed using the Adaptive Rank Truncated Product |

2014-02-20 | denstrip | Density strips and other methods for compactly illustrating distributions |

2014-02-20 | DiagTest3Grp | Diagnostic test summary measures for three ordinal groups |

2014-02-20 | diffusionMap | Diffusion map |

2014-02-20 | diveMove | Dive analysis and calibration |

2014-02-20 | diversitree | diversitree: comparative phylogenetic analyses of diversification |

2014-02-20 | lorec | LOw Rand and sparsE Covariance matrix estimation |

2014-02-20 | mixreg | Functions to fit mixtures of regressions |

2014-02-20 | OLScurve | OLS growth curve trajectories |

2014-02-20 | restorepoint | Debugging with restore points |

2014-02-20 | RFreak | R/FrEAK interface |

2014-02-19 | gld | Estimation and use of the generalised (Tukey) lambda distribution |

2014-02-19 | mGSZ | Gene set analysis based on GSZ-scoring function and asymptotic p-value |

2014-02-18 | forams | Foraminifera and Community Ecology Analyses |

2014-02-18 | pbdDEMO | Programming with Big Data – Demonstrations of pbd Packages |

2014-02-18 | rfisheries | R interface for fisheries data |

2014-02-17 | bshazard | Nonparametric Smoothing of the Hazard Function |

2014-02-17 | edeR | Email Data Extraction Using R |

2014-02-17 | grppenalty | Concave 1-norm and 2-norm group penalty in linear and logistic regression |

2014-02-17 | praktikum | Kvantitatiivsete meetodite praktikumi asjad / Functions used in the course "Quantitative methods in behavioural sciences" (SHPH.00.004), University of Tartu |

2014-02-17 | RcmdrPlugin.pointG | Graphical POINT of view for questionnaire data Rcmdr Plug-In |

2014-02-17 | turner | Turn vectors and lists of vectors into indexed structures |

2014-02-17 | YPmodel | The Short-term and Long-term Hazard Ratio Model for Survival Data |

2014-02-16 | DTComPair | Comparison of Binary Diagnostic Tests in a Paired Study Design |

2014-02-16 | sdtoolkit | Scenario Discovery Tools to Support Robust Decision Making |

2014-02-15 | BMhyd | PCM for Hybridization |

2014-02-15 | CRAC | Cosmology R Analysis Code |

2014-02-14 | prospectr | Miscellaneous functions for processing and sample selection of vis-NIR diffuse reflectance data |

2014-02-14 | rtiff | A tiff reader for R |

2014-02-14 | surface | Fitting Hansen Models to Investigate Convergent Evolution |

2014-02-13 | KATforDCEMRI | Kinetic analysis and visualization of DCE-MRI data |

2014-02-13 | rsae | Robust Small Area Estimation |

2014-02-13 | wrspathrow | Functions for working with Worldwide Reference System (WRS) |

2014-02-12 | bio.infer | Predict environmental conditions from biological observations |

2014-02-12 | CHNOSZ | Chemical Thermodynamics and Activity Diagrams |

2014-02-12 | ecosim | Toolbox for Aquatic Ecosystem Modeling |

2014-02-12 | expm | Matrix exponential |

2014-02-12 | mcr | Method Comparison Regression |

2014-02-12 | MLCM | Maximum Likelihood Conjoint Measurement |

2014-02-12 | packdep | Mapping dependencies among R packages |

2014-02-12 | QCGWAS | Quality Control of Genome Wide Association Study results |

2014-02-12 | SAM | Sparse Additive Modelling |

2014-02-12 | wrspathrowData | Data used by the wrspathrow package |

2014-02-11 | bfa | Bayesian Factor Analysis |

2014-02-11 | chromoR | Analysis of chromosomal interactions data (correction, segmentation and comparison) |

2014-02-11 | chron | Chronological objects which can handle dates and times |

2014-02-11 | dlmodeler | Generalized Dynamic Linear Modeler |

2014-02-11 | filehash | Simple key-value database |

2014-02-11 | frair | Functional response analysis in R |

2014-02-11 | HMMCont | Hidden Markov Model for Continuous Observations Processes |

2014-02-11 | IgorR | Read binary files saved by Igor Pro (including Neuromatic data) |

2014-02-11 | kknn | Weighted k-Nearest Neighbors |

2014-02-11 | phenex | Auxiliary functions for phenological data analysis |

2014-02-11 | scatterplot3d | 3D Scatter Plot |

2014-02-11 | schwartz97 | A package on the Schwartz two-factor commodity model |

2014-02-10 | FKF | Fast Kalman Filter |

2014-02-10 | npst | Generalization of Hewitt's Seasonality Test |

2014-02-10 | rtop | Interpolation of data with variable spatial support |

2014-02-10 | statnet | Software tools for the Statistical Analysis of Network Data |

2014-02-10 | tfplot | Time Frame User Utilities |

2014-02-09 | phom | Persistent Homology in R |

2014-02-09 | soc.ca | Specific correspondence analysis for the social sciences |

2014-02-09 | XNomial | Exact Goodness-Of-Fit Test For Multinomial Data With Fixed Probabilities |

2014-02-08 | FAiR | Factor Analysis in R |

2014-02-08 | phyreg | Implements the Phylogenetic Regression of Grafen (1989) |

2014-02-07 | cpca | Methods to perform Common Principal Component Analysis (CPCA) |

2014-02-07 | gpr | A Minimalistic package to apply Gaussian Process in R |

2014-02-07 | networkDynamicData | dynamic network datasets |

2014-02-07 | Ruchardet | R package to detect character encoding |

2014-02-07 | SYNCSA | SYNCSA - Analysis of functional and phylogenetic patterns in metacommunities |

2014-02-06 | easynls | Easy nonlinear model |

2014-02-06 | logcondiscr | Estimate a Log-Concave Probability Mass function from Discrete i.i.d. Observations |

2014-02-06 | multiplex | Analysis of Multiple Social Networks with Algebra |

2014-02-06 | smoothtail | Smooth Estimation of GPD Shape Parameter |

2014-02-06 | unbalanced | The package implements different data-driven method for unbalanced datasets |

2014-02-06 | VecStatGraphs2D | Vector analysis using graphical and analytical methods in 2D |

2014-02-05 | paf | Attributable Fraction Function for Censored Survival Data |

2014-02-05 | StrainRanking | Ranking of pathogen strains |

2014-02-04 | depmixS4 | Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4 |

2014-02-04 | hydroGOF | Goodness-of-fit functions for comparison of simulated and observed hydrological time series |

2014-02-04 | spc | Statistical Process Control – Collection of Some Useful Functions |

2014-02-03 | MetABEL | Meta-analysis of genome-wide SNP association results |

2014-02-03 | PIGShift | Polygenic Inverse Gamma rate Shifts |

2014-02-03 | pmclust | Parallel Model-Based Clustering |

2014-02-03 | sampSurf | Sampling Surface Simulation for Areal Sampling Methods |

2014-02-02 | optimsimplex | R port of the Scilab optimsimplex module |

2014-02-01 | SCBmeanfd | Simultaneous Confidence Bands for the Mean of Functional Data |

2014-02-01 | vbdm | Variational Bayes Discrete Mixture Model |

2014-01-31 | bqtl | Bayesian QTL mapping toolkit |

2014-01-31 | EMD | Empirical Mode Decomposition and Hilbert Spectral Analysis |

2014-01-31 | fdaMixed | Functional data analysis in a mixed model framework |

2014-01-31 | gdalUtils | Wrappers for the Geospatial Data Abstraction Library (GDAL) Utilities |

2014-01-31 | HLMdiag | Diagnostic tools for hierarchical (multilevel) linear models |

2014-01-31 | jackstraw | Non-parametric Jackstraw for Principal Component Analysis |

2014-01-31 | loe | Local Ordinal Embedding |

2014-01-31 | naturalsort | Natural Ordering |

2014-01-31 | ndtv | Network Dynamic Temporal Visualizations |

2014-01-31 | Pomic | Pomic |

2014-01-31 | rgam | Robust Generalized Additive Model |

2014-01-31 | SBSA | Simplified Bayesian Sensitivity Analysis |

2014-01-31 | simplexreg | Regression Analysis of Proportional Data Using Simplex Distribution |

2014-01-30 | mmeta | Multivariate Meta-Analysis |

2014-01-30 | nonlinearTseries | R package for nonlinear time series analysis |

2014-01-30 | pSI | Specificity Index Statistic |

2014-01-30 | VariABEL | Testing of genotypic variance heterogeneity to detect potentially interacting SNP |

2014-01-29 | fdasrvf | Elastic Functional Data Analysis |

2014-01-29 | lazyData | A LazyData Facility |

2014-01-29 | permute | Functions for generating restricted permutations of data |

2014-01-29 | VoxR | Metrics extraction of trees from T-LiDAR data |

2014-01-28 | cacIRT | Classification accuracy and consistency under Item Response Theory |

2014-01-28 | CVcalibration | Estimation of the Calibration Equation with Error-in Observations |

2014-01-28 | in2extRemes | Into the extRemes Package |

2014-01-28 | RapidPolygonLookup | Polygon lookup using kd trees |

2014-01-28 | Rramas | Matrix population models |

2014-01-28 | SGP | An R Package for the Calculation and Visualization of Student Growth Percentiles & Percentile Growth Trajectories |

2014-01-27 | dualScale | Dual Scaling Analysis of Multiple Choice Data |

2014-01-27 | ebal | Entropy reweighting to create balanced samples |

2014-01-27 | MergeGUI | A GUI for Merging Datasets in R |

2014-01-27 | Synth | Synthetic Control Group Method for Comparative Case Studies |

2014-01-26 | RcppZiggurat | Rcpp integration of different Ziggurat Normal RNG implementations |

2014-01-26 | sqliter | Connection wrapper to SQLite databases |

2014-01-25 | gnmf | Generalized Non-negative Matrix Factorization Based on Renyi Divergence |

2014-01-25 | irlba | Fast partial SVD by implicitly-restarted Lanczos bidiagonalization |

2014-01-25 | PEMM | A Penalized EM algorithm incorporating missing-data mechanism |

2014-01-25 | RWiener | Wiener process distribution functions |

2014-01-24 | gconcord | Concord method for Graphical Model Selection |

2014-01-24 | LSC | Local Statistical Complexity - Automatic Pattern Discovery in Spatio-Temporal Data |

2014-01-23 | correlate | Multivariate Data Generation by Permutation |

2014-01-23 | cSFM | Covariate-adjusted Skewed Functional Model (cSFM) |

2014-01-23 | gitter | an R package for quantification of pinned microbial culture |

2014-01-23 | hydroTSM | Time series management, analysis and interpolation for hydrological modelling |

2014-01-23 | interval | Weighted Logrank Tests and NPMLE for interval censored data |

2014-01-23 | irtoys | Simple interface to the estimation and plotting of IRT models |

2014-01-23 | jpeg | Read and write JPEG images |

2014-01-23 | lmtest | Testing Linear Regression Models |

2014-01-23 | msos | Datasets and Functions used in Multivariate Statistics: Old School by John Marden |

2014-01-23 | pedantics | Functions to facilitate power and sensitivity analyses for genetic studies of natural populations |

2014-01-23 | saws | Small-Sample Adjustments for Wald tests Using Sandwich Estimators |

2014-01-23 | sigclust | Statistical Significance of Clustering |

2014-01-22 | acs | Download, manipulate, and present data from the US Census American Community Survey |

2014-01-22 | BayesSingleSub | Computation of Bayes factors for interrupted time-series designs |

2014-01-22 | Gammareg | classic gamma regression: joint modeling of mean and shape parameters |

2014-01-22 | psyphy | Functions for analyzing psychophysical data in R |

2014-01-22 | RAMpath | Structural Equation Modeling using the reticular action model (RAM) Notation |

2014-01-22 | rateratio.test | Exact rate ratio test |

2014-01-21 | gvlma | Global Validation of Linear Models Assumptions |

2014-01-21 | truncnorm | Truncated normal distribution |

2014-01-21 | useful | A collection of handy, useful functions |

2014-01-20 | AOfamilies | Aranda-Ordaz (AO) transformation families |

2014-01-20 | HUM | compute HUM value and visualize ROC curves |

2014-01-20 | mistat | Data sets, functions and examples from the book:"Modern Industrial Statistics" by Kenett, Zacks and Amberti |

2014-01-20 | MLDS | Maximum Likelihood Difference Scaling |

2014-01-20 | SGPdata | Exemplar data sets for SGP analyses |

2014-01-19 | blockmatrix | blockmatrix: Tools to solve algebraic systems with partitioned matrices |

2014-01-19 | cda | Coupled dipole approximation of light scattering by clusters of nanoparticles |

2014-01-19 | IBHM | Approximation using the IBHM method |

2014-01-19 | ldbounds | Lan-DeMets Method for Group Sequential Boundaries |

2014-01-19 | mfx | Marginal Effects, Odds Ratios and Incidence Rate Ratios for GLMs |

2014-01-19 | RHRV | Heart rate variability analysis of ECG data |

2014-01-19 | RTextTools | Automatic Text Classification via Supervised Learning |

2014-01-19 | simexaft | simexaft |

2014-01-19 | WeightedCluster | Clustering of Weighted Data |

2014-01-18 | HBSTM | Hierarchical Bayesian Space-Time models for Gaussian space-time data |

2014-01-18 | Sequential | Exact Sequential Analysis for Poisson Data |

2014-01-17 | arulesSequences | Mining frequent sequences |

2014-01-17 | dosresmeta | Performing multivariate dose-response meta-analysis |

2014-01-17 | odfWeave | Sweave processing of Open Document Format (ODF) files |

2014-01-17 | rbhl | R interface to the Biodiversity Heritage Library |

2014-01-17 | SCORER2 | SCORER 2.0: an algorithm for distinguishing parallel dimeric and trimeric coiled-coil sequences |

2014-01-17 | wpp2008 | World Population Prospects 2008 |

2014-01-16 | dfexplore | Explore data.frames by plotting NA and classes of each variable |

2014-01-16 | fastHICA | Hierarchical Independent Component Analysis: a multi-scale sparse non-orthogonal data-driven basis |

2014-01-16 | mapproj | Map Projections |

2014-01-16 | multinbmod | Regression analysis of overdispersed correlated count data |

2014-01-16 | quadrupen | Sparsity by Worst-Case Quadratic Penalties |

2014-01-16 | sm | Smoothing methods for nonparametric regression and density estimation |

2014-01-15 | cba | Clustering for Business Analytics |

2014-01-15 | clustsig | Significant Cluster Analysis |

2014-01-15 | Funclustering | A package for functional data clustering |

2014-01-15 | GWsignif | Genome-wide significance for whole genome sequencing studies |

2014-01-15 | mph | Multiscale persistent homology |

2014-01-15 | OPDOE | OPtimal Design Of Experiments |

2014-01-15 | RAtmosphere | Standard Atmospheric profiles |

2014-01-15 | reglogit | Simulation-based Regularized Logistic Regression |

2014-01-14 | AcceptanceSampling | Creation and evaluation of Acceptance Sampling Plans |

2014-01-14 | ICEinfer | Incremental Cost-Effectiveness (ICE) Statistical Inference from Two Unbiased Samples |

2014-01-14 | iDynoR | R Analysis package for iDynoMiCS Simulation Results |

2014-01-14 | linkim | Linkage information based genotype imputation method |

2014-01-14 | oz | Plot the Australian coastline and states |

2014-01-14 | rEMM | Extensible Markov Model (EMM) for Data Stream Clustering in R |

2014-01-14 | RockFab | Rock fabric and strain analysis tools |

2014-01-14 | RXshrink | Maximum Likelihood Shrinkage via Generalized Ridge or Least Angle Regression |

2014-01-14 | sna | Tools for Social Network Analysis |

2014-01-13 | geophys | Geophysics, Continuum Mechanics, Mogi Model |

2014-01-13 | MF | Mitigated Fraction |

2014-01-13 | TimeMachine | Time Machine |

2014-01-12 | pcIRT | IRT models for polytomous and continuous item responses |

2014-01-11 | DSBayes | Bayesian subgroup analysis in clinical trials |

2014-01-11 | gamlss.data | GAMLSS Data |

2014-01-11 | kst | Knowledge Space Theory |

2014-01-10 | citbcmst | CIT Breast Cancer Molecular SubTypes Prediction |

2014-01-10 | citccmst | CIT Colon Cancer Molecular SubTypes Prediction |

2014-01-10 | GroupSeq | A GUI-based program to compute probabilities regarding group sequential designs |

2014-01-10 | jointPm | Risk estimation using the joint probability method |

2014-01-10 | networkTomography | Tools for network tomography |

2014-01-10 | phylosim | R package for simulating biological sequence evolution |

2014-01-10 | plRasch | Log Linear by Linear Association models and Rasch family models by pseudolikelihood estimation |

2014-01-10 | poLCA | Polytomous variable Latent Class Analysis |

2014-01-10 | vectoptim | Vectorized optimization methods |

2014-01-09 | cwm | Cluster Weighted Models by EM algorithm |

2014-01-09 | dagR | R functions for directed acyclic graphs |

2014-01-09 | gpmap | Analysing and plotting genotype-phenotype maps |

2014-01-08 | CADFtest | This package performs the CADF unit root test proposed in Hansen (1995) |

2014-01-08 | GRaF | Species distribution modelling using latent Gaussian random fields |

2014-01-08 | MultiPhen | MultiPhen, a package for the genetic association testing of multiple phenotypes |

2014-01-08 | PGM2 | Recursive method for construction of nested resolvable designs and uniform designs associated |

2014-01-08 | WhatIf | WhatIf: Software for Evaluating Counterfactuals |

2014-01-07 | AdMit | Adaptive Mixture of Student-t distributions |

2014-01-07 | bayesGARCH | Bayesian Estimation of the GARCH(1,1) Model with Student-t Innovations |

2014-01-07 | multic | Quantitative linkage analysis tools using the variance components approach |

2014-01-07 | PEIP | Functions for Aster Book on Inverse Theory |

2014-01-07 | rapportools | Miscellaneous (stats) helper functions with sane defaults for reporting |

2014-01-07 | rfishbase | R Interface to FishBASE |

2014-01-07 | RVowpalWabbit | R interface to the Vowpal Wabbit |

2014-01-07 | shuffle | The shuffle estimator for explainable variance |

2014-01-07 | smatr | (Standardised) Major Axis Estimation and Testing Routines |

2014-01-07 | streamR | Access to Twitter Streaming API via R |

2014-01-06 | FLLat | Fused Lasso Latent Feature Model |

2014-01-06 | oem | Orthogonalizing Expectation maximization |

2014-01-06 | RFOC | Graphics for Spherical Distributions and Earthquake Focal Mechanisms |

2014-01-06 | robcor | Robust Correlations |

2014-01-06 | Rquake | Seismic Hypocenter Determination |

2014-01-06 | RTOMO | Visualization for seismic tomography |

2014-01-06 | sfa | Stochastic Frontier Analysis |

2014-01-06 | TeachNet | Fits neural networks to learn about back propagation |

2014-01-05 | GEOmap | Topographic and Geologic Mapping |

2014-01-05 | glmmGS | Gauss-Seidel Generalized Linear Mixed Model solver |

2014-01-05 | RClimMAWGEN | RClimMAWGEN (R Climate Index Multi-site Auto-regressive Weather GENeretor): a package to generate time series of climate indices from RMAWGEN generations |

2014-01-05 | RSEIS | Seismic Time Series Analysis Tools |

2014-01-04 | DESnowball | Bagging with Distance-based Regression for Differential Gene Expression Analyses |

2014-01-04 | RPMG | Graphical User Interface (GUI) for interactive R analysis sessions |

2014-01-04 | SWATmodel | A multi-OS implementation of the TAMU SWAT model |

2014-01-03 | AdaptiveSparsity | Adaptive Sparsity Models |

2014-01-03 | compHclust | Complementary Hierarchical Clustering |

2014-01-03 | cosmosR | cosmosR |

2014-01-03 | datalist | An R package to convert data sets for import into JAGS, WinBUGS and OpenBUGS and to generate data.frames for predicting the effects of particular variables |

2014-01-03 | fractal | Fractal Time Series Modeling and Analysis |

2014-01-03 | geozoo | Zoo of Geometric Objects |

2014-01-03 | glmnetcr | Fit a penalized constrained continuation ratio model for predicting an ordinal response |

2014-01-03 | glmpathcr | Fit a penalized continuation ratio model for predicting an ordinal response |

2014-01-03 | qiimer | Work with QIIME Output Files in R |

2014-01-03 | qrfactor | Simultaneous simulation of Q and R mode factor analyses with Spatial data |

2014-01-02 | BayesComm | Bayesian community ecology analysis |

2014-01-02 | binom | Binomial Confidence Intervals For Several Parameterizations |

2014-01-02 | BioGeoBEARS | BioGeography with Bayesian (and Likelihood) Evolutionary Analysis in R Scripts |

2014-01-02 | FAMT | Factor Analysis for Multiple Testing (FAMT) : simultaneous tests under dependence in high-dimensional data |

2014-01-02 | glmmBUGS | Generalised Linear Mixed Models and Spatial Models with WinBUGS, BRugs, or OpenBUGS |

2014-01-02 | PBImisc | A set of datasets used in my classes or in the book ,,Modele liniowe i mieszane w R, wraz z przykladami w analizie danych” |

2014-01-02 | PedCNV | An implementation for association analysis with CNV data |

2014-01-02 | RCA | Relational Class Analysis |

2014-01-02 | robustgam | Robust Estimation for Generalized Additive Models |

2014-01-02 | VIMGUI | Visualization and Imputation of Missing Values |

2014-01-02 | xts | eXtensible Time Series |

2014-01-01 | mmm | an R package for analyzing multivariate longitudinal data with multivariate marginal models |

2014-01-01 | PLRModels | Statistical inference in partial linear regression models |

2013-12-31 | biplotbootGUI | Bootstrap on Classical Biplots |

2013-12-31 | fitDRC | Fitting Density Ratio Classes |

2013-12-31 | lubridate | Make dealing with dates a little easier |

2013-12-31 | missForest | Nonparametric Missing Value Imputation using Random Forest |

2013-12-31 | mmm2 | Multivariate marginal models with shared regression parameters |

2013-12-31 | texmex | Statistical modelling of extreme values |

2013-12-31 | TiddlyWikiR | Create dynamic reports using a TiddlyWiki template |

2013-12-30 | dcemriS4 | A Package for Medical Image Analysis (S4 implementation) |

2013-12-30 | dtt | Discrete Trigonometric Transforms |

2013-12-30 | financial | Solving financial problems in R |

2013-12-30 | mblm | Median-Based Linear Models |

2013-12-30 | moonsun | Basic astronomical calculations with R |

2013-12-30 | PIGE | Self contained gene set analysis for gene- and pathway-environment interaction analysis |

2013-12-30 | sdprisk | Measures of Risk for the Compound Poisson Risk Process with Diffusion |

2013-12-30 | seawaveQ | U.S. Geological Survey seawaveQ model |

2013-12-30 | wmtsa | Wavelet Methods for Time Series Analysis |

2013-12-29 | BiasedUrn | Biased Urn model distributions |

2013-12-28 | acm4r | Align-and-Count Method comparisons of RFLP data |

2013-12-28 | mhurdle | Multiple hurdle Tobit models |

2013-12-28 | pglm | panel generalized linear model |

2013-12-28 | plm | Linear Models for Panel Data |

2013-12-28 | prevR | Estimating regional trends of a prevalence from a DHS |

2013-12-28 | rgabriel | Gabriel Multiple Comparison Test and Plot the Confidence Interval on Barplot |

2013-12-27 | clustrd | Methods for joint dimension reduction and clustering |

2013-12-27 | extfunnel | Additional Funnel Plot Augmentations |

2013-12-27 | fptdApprox | Approximation of first-passage-time densities for diffusion processes |

2013-12-27 | GenABEL | genome-wide SNP association analysis |

2013-12-27 | GenABEL.data | Package contains data which is used by GenABEL example and test functions |

2013-12-27 | mlogit | multinomial logit model |

2013-12-27 | ROC632 | Construction of diagnostic or prognostic scoring system and internal validation of its discriminative capacities based on ROC curve and 0.633+ boostrap resampling |

2013-12-27 | saves | Fast load variables |

2013-12-27 | SIN | A SINful Approach to Selection of Gaussian Graphical Markov Models |

2013-12-27 | spider | Species Identity and Evolution in R |

2013-12-27 | truncreg | Truncated Gaussian Regression Models |

2013-12-26 | cpk | Clinical Pharmacokinetics |

2013-12-26 | mycobacrvR | Integrative immunoinformatics for Mycobacterial diseases in R platform |

2013-12-25 | kmc | Kaplan - Meier estimator with constraints for right censored data – a recursive computational algorithm |

2013-12-24 | evt0 | Mean of order p, peaks over random threshold Hill and high quantile estimates |

2013-12-24 | RcmdrPlugin.sos | Efficiently search the R help pages |

2013-12-24 | rJava | Low-level R to Java interface |

2013-12-24 | safeBinaryRegression | Safe Binary Regression |

2013-12-24 | TSTutorial | Fitting and Predict Time Series Interactive Laboratory |

2013-12-23 | audio | Audio Interface for R |

2013-12-23 | genoPlotR | Plot publication-grade gene and genome maps |

2013-12-23 | MigClim | Implementing dispersal into species distribution models |

2013-12-23 | pcaL1 | Three L1-Norm PCA Methods |

2013-12-23 | SHIP | SHrinkage covariance Incorporating Prior knowledge |

2013-12-21 | JGR | JGR - Java GUI for R |

2013-12-21 | pa | Performance Attribution for Equity Portfolios |

2013-12-21 | pmcgd | pmcgd |

2013-12-21 | RSofia | Port of sofia-ml (http://code.google.com/p/sofia-ml/) to R |

2013-12-21 | XiMpLe | A simple XML tree parser and generator |

2013-12-20 | AdequacyModel | Adequacy of probabilistic models and generation of pseudo-random numbers |

2013-12-20 | LINselect | Selection of linear estimators |

2013-12-20 | ltm | Latent Trait Models under IRT |

2013-12-20 | polytomous | Polytomous logistic regression for fixed and mixed effects |

2013-12-20 | profileR | Profile Analysis of Multivariate Data in R |

2013-12-20 | ROCt | Time-dependent ROC curve estimation and adaptation to the relative survival context |

2013-12-19 | AssotesteR | Statistical Tests for Genetic Association Studies |

2013-12-19 | BBRecapture | Bayesian Behavioural Capture-Recapture Models |

2013-12-19 | colortools | Tools for colors in a Hue-Saturation-Value (HSV) color model |

2013-12-19 | minPtest | Gene region-level testing procedure for SNP data, using the min P test resampling approach |

2013-12-19 | TilePlot | Characterization of functional genes in complex microbial communities using tiling DNA microarrays |

2013-12-18 | bvls | The Stark-Parker algorithm for bounded-variable least squares |

2013-12-18 | cellVolumeDist | Functions to fit cell volume distributions and thereby estimate cell growth rates and division times |

2013-12-18 | FindMinIC | Find Models with Minimum IC |

2013-12-18 | HWEBayes | Bayesian investigation of Hardy-Weinberg Equilibrium via estimation and testing |

2013-12-18 | maxlike | Model species distributions by estimating the probability of occurrence using presence-only data |

2013-12-18 | mvna | Nelson-Aalen estimator of the cumulative hazard in multistate models |

2013-12-18 | PropClust | Propensity Clustering and Decomposition |

2013-12-18 | RAppArmor | Interfaces to Linux and AppArmor security methods |

2013-12-18 | RcmdrPlugin.lfstat | Rcmdr Plug-In for low flow analysis |

2013-12-18 | scalreg | Scaled sparse linear regression |

2013-12-18 | snowfall | Easier cluster computing (based on snow) |

2013-12-18 | VHDClassification | Discrimination/Classification in very high dimension with linear and quadratic rules |

2013-12-18 | wavelets | A package of functions for computing wavelet filters, wavelet transforms and multiresolution analyses |

2013-12-18 | ycinterextra | Yield curve or zero-coupon prices interpolation and extrapolation |

2013-12-17 | Demerelate | Functions to calculate relatedness on diploid genetic data |

2013-12-17 | fBonds | Bonds and Interest Rate Models |

2013-12-17 | fExtremes | Rmetrics - Extreme Financial Market Data |

2013-12-17 | g.data | Delayed-Data Packages |

2013-12-17 | iRefR | iRefIndex Manager |

2013-12-17 | reportRx | Tools for automatically generating reproducible clinical report |

2013-12-17 | spacom | Spatially weighted context data for multilevel modelling |

2013-12-16 | pbdDMAT | Programming with Big Data – Distributed Matrix Methods |

2013-12-16 | RobRSVD | Robust Regularized Singular Value Decomposition |

2013-12-16 | simone | Statistical Inference for MOdular NEtworks (SIMoNe) |

2013-12-15 | fcd | Fused Community Detection |

2013-12-15 | lpc | Lassoed principal components for testing significance of features |

2013-12-15 | MVB | Mutivariate Bernoulli log-linear model |

2013-12-15 | NetSim | A Social Networks Simulation Tool in R |

2013-12-15 | patchDVI | Package to patch .dvi files |

2013-12-15 | ryouready | Companion to the 'R your ready?' book |

2013-12-15 | scuba | Scuba diving calculations and decompression models |

2013-12-15 | svdvisual | SVD visualization tools |

2013-12-14 | DunnettTests | Software implementation of step-down and step-up Dunnett test procedures |

2013-12-14 | EMCluster | EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution |

2013-12-14 | fortunes | R Fortunes |

2013-12-14 | ggsubplot | Explore complex data by embedding subplots within plots |

2013-12-14 | JoSAE | Functions for some unit-level small area estimators and their variances |

2013-12-14 | MiST | Mixed effects Score Test for continuous outcomes |

2013-12-14 | pbdBASE | Programming with Big Data – Base Wrappers for Distributed Matrices |

2013-12-14 | phyclust | Phylogenetic Clustering (Phyloclustering) |

2013-12-14 | TapeR | Flexible tree taper curves based on semiparametric mixed models |

2013-12-13 | adhoc | calculate ad hoc distance thresholds for DNA barcoding identification |

2013-12-13 | amei | Adaptive Management of Epidemiological Interventions |

2013-12-13 | clusterPower | Power calculations for cluster-randomized and cluster-randomized crossover trials |

2013-12-13 | geoRglm | geoRglm - a package for generalised linear spatial models |

2013-12-13 | HIV.LifeTables | HIV calibrated model life tables for countries with generalized HIV epidemics |

2013-12-13 | Kmisc | Kevin Miscellaneous |

2013-12-13 | logconcens | Maximum likelihood estimation of a log-concave density based on censored data |

2013-12-13 | Oncotree | Estimating oncogenetic trees |

2013-12-13 | skda | Sparse (Multicategory) Kernel Discriminant Analysis |

2013-12-13 | survrec | Survival analysis for recurrent event data |

2013-12-12 | BACCO | Bayesian Analysis of Computer Code Output (BACCO) |

2013-12-12 | betapart | Partitioning beta diversity into turnover and nestedness components |

2013-12-12 | dmt | Dependency Modeling Toolkit |

2013-12-12 | gcbd | GPU/CPU Benchmarking in Debian-based systems |

2013-12-12 | languageR | Data sets and functions with "Analyzing Linguistic Data: A practical introduction to statistics" |

2013-12-12 | mleur | Maximum likelihood unit root test |

2013-12-12 | multitable | Simultaneous manipulation of multiple arrays of data, with data.list objects |

2013-12-12 | Myrrix | Interface to Myrrix. Myrrix is a complete, real-time, scalable clustering and recommender system, evolved from Apache Mahout |

2013-12-12 | QTLRel | Tools for mapping of quantitative traits of genetically related individuals and calculating identity coefficients from a pedigree |

2013-12-12 | RcppDE | Global optimization by differential evolution in C++ |

2013-12-12 | rworldmap | Mapping global data, vector and raster |

2013-12-12 | sealasso | Standard Error Adjusted Adaptive Lasso |

2013-12-12 | SeleMix | Selective Editing via Mixture models |

2013-12-12 | synbreedData | Data for the synbreed package |

2013-12-12 | tileHMM | Hidden Markov Models for ChIP-on-Chip Analysis |

2013-12-12 | untb | ecological drift under the UNTB |

2013-12-11 | aidar | Tools for reading AIDA (http://aida.freehep.org/) files into R |

2013-12-11 | diffractometry | Baseline identification and peak decomposition for x-ray diffractograms |

2013-12-11 | dtw | Dynamic time warping algorithms |

2013-12-11 | etable | Easy Table |

2013-12-11 | ExPosition | Exploratory analysis with the singular value decomposition |

2013-12-11 | giRaph | The giRaph package for graph representation in R |

2013-12-11 | grImport | Importing Vector Graphics |

2013-12-11 | InPosition | Inference Tests for ExPosition |

2013-12-11 | mathgraph | Directed and undirected graphs |

2013-12-11 | mlogitBMA | Bayesian Model Averaging for Multinomial Logit Models |

2013-12-11 | pgs | Precision of Geometric Sampling |

2013-12-11 | prob | Elementary Probability on Finite Sample Spaces |

2013-12-11 | rpartitions | Code for integer partitioning |

2013-12-11 | rspear | Calculate SPEARpesticide in R (http://www.systemecology.eu/SPEAR/index.php) |

2013-12-11 | smfsb | SMfSB 2e: Stochastic Modelling for Systems Biology, second edition |

2013-12-11 | SOAR | Memory management in R by delayed assignments |

2013-12-11 | TExPosition | Two-table ExPosition |

2013-12-11 | TInPosition | Inference tests for TExPosition |

2013-12-11 | wle | Weighted Likelihood Estimation |

2013-12-10 | aylmer | A generalization of Fisher's exact test |

2013-12-10 | Bessel | Bessel – Bessel Functions Computations and Approximations |

2013-12-10 | bfp | Bayesian Fractional Polynomials |

2013-12-10 | binomSamSize | Confidence intervals and sample size determination for a binomial proportion under simple random sampling and pooled sampling |

2013-12-10 | CCM | Correlation classification method (CCM) |

2013-12-10 | cloudUtil | Cloud Util Plots |

2013-12-10 | conics | Plot Conics |

2013-12-10 | corclass | Correlational Class Analysis |

2013-12-10 | CVST | Fast Cross-Validation via Sequential Testing |

2013-12-10 | fTrading | Technical Trading Analysis |

2013-12-10 | fxregime | Exchange Rate Regime Analysis |

2013-12-10 | glmx | Generalized Linear Models Extended |

2013-12-10 | gsl | wrapper for the Gnu Scientific Library |

2013-12-10 | hyperdirichlet | A generalization of the Dirichlet distribution |

2013-12-10 | iBUGS | An Interface to WinBUGS/OpenBUGS/JAGS by gWidgets |

2013-12-10 | MixSim | Simulating Data to Study Performance of Clustering Algorithms |

2013-12-10 | mlegp | Maximum Likelihood Estimates of Gaussian Processes |

2013-12-10 | pathmox | Pathmox Approach of Segmentation Trees in Partial Least Squares Path Modeling |

2013-12-10 | prettyGraphs | publication-quality graphics |

2013-12-10 | SII | Calculate ANSI S3.5-1997 Speech Intelligibility Index |

2013-12-10 | sparseLTSEigen | RcppEigen back end for sparse least trimmed squares regression |

2013-12-10 | tdthap | TDT tests for extended haplotypes |

2013-12-09 | calibrator | Bayesian calibration of complex computer codes |

2013-12-09 | DIME | DIME (Differential Identification using Mixture Ensemble) |

2013-12-09 | vrmlgen | Generate 3D visualizations for data exploration on the web |

2013-12-08 | approximator | Bayesian prediction of complex computer codes |

2013-12-08 | discrimARTs | Discrimination of Alternative Reproductive Tactics (ARTs) |

2013-12-08 | partitions | Additive partitions of integers |

2013-12-08 | zic | Bayesian Inference for Zero-Inflated Count Models |

2013-12-07 | elrm | Exact Logistic Regression via MCMC |

2013-12-07 | hflights | Flights that departed Houston in 2011 |

2013-12-07 | sortinghat | sortinghat |

2013-12-06 | assertthat | Easy pre and post assertions |

2013-12-06 | NADA | Nondetects And Data Analysis for environmental data |

2013-12-06 | NlsyLinks | Utilities and kinship information for behavior genetics and developmental research using the NLSY |

2013-12-05 | Brobdingnag | Very large numbers in R |

2013-12-05 | drsmooth | Dose-Response Modeling with Smoothing Splines |

2013-12-05 | DynamicDistribution | Dynamically visualized probability distributions and their moments |

2013-12-05 | hddplot | Use known groups in high-dimensional data to derive scores for plots |

2013-12-05 | MaXact | Exact max-type Cochran-Armitage trend test(CATT) |

2013-12-05 | multivator | A multivariate emulator |

2013-12-05 | ref | References for R |

2013-12-05 | Sample.Size | Sample size calculation |

2013-12-05 | snpStatsWriter | Flexible writing of snpStats objects to flat files |

2013-12-04 | obs.agree | An R package to assess agreement between observers |

2013-12-03 | ADM3 | An Interpretation of the ADM method - automated detection algorithm |

2013-12-03 | ClustOfVar | Clustering of variables |

2013-12-03 | DEMEtics | Evaluating the genetic differentiation between populations based on Gst and D values |

2013-12-03 | ecodist | Dissimilarity-based functions for ecological analysis |

2013-12-03 | Interpol.T | Hourly interpolation of multiple temperature daily series |

2013-12-03 | iplots | iPlots - interactive graphics for R |

2013-12-03 | mefa | Multivariate Data Handling in Ecology and Biogeography |

2013-12-03 | netClass | netClass: An R Package for Network-Based Biomarker Discovery |

2013-12-03 | png | Read and write PNG images |

2013-12-03 | RCassandra | R/Cassandra interface |

2013-12-02 | dvn | Access to The Dataverse Network APIs |

2013-12-02 | FHtest | Tests for right and interval-censored survival data based on the Fleming-Harrington class |

2013-12-02 | GrassmannOptim | Grassmann Manifold Optimization |

2013-12-02 | mRm | An R package for conditional maximum likelihood estimation in mixed Rasch models |

2013-12-02 | OrdNor | Concurrent generation of ordinal and normal data with given correlation matrix and marginal distributions |

2013-12-02 | PoiClaClu | Classification and clustering of sequencing data based on a Poisson model |

2013-12-02 | superMDS | Implements the supervised multidimensional scaling (superMDS) proposal of Witten and Tibshirani (2011) |

2013-12-01 | exptest | Tests for Exponentiality |

2013-11-30 | adephylo | adephylo: exploratory analyses for the phylogenetic comparative method |

2013-11-29 | caper | Comparative Analyses of Phylogenetics and Evolution in R |

2013-11-29 | cycloids | cycloids |

2013-11-28 | aml | Adaptive Mixed LASSO |

2013-11-28 | ergm.count | Fit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges |

2013-11-28 | ergm.userterms | User-specified terms for the statnet suite of packages |

2013-11-28 | hwde | Models and tests for departure from Hardy-Weinberg equilibrium and independence between loci |

2013-11-28 | LCFdata | Data sets for package “LMERConvenienceFunctions” |

2013-11-28 | nodeHarvest | Node Harvest for regression and classification |

2013-11-28 | ROI | R Optimization Infrastructure |

2013-11-28 | ROI.plugin.glpk | ROI-plugin GLPK |

2013-11-28 | ROI.plugin.quadprog | ROI-plugin quadprog |

2013-11-28 | ROI.plugin.symphony | ROI-plugin symphony |

2013-11-27 | prognosticROC | Prognostic ROC curves for evaluating the predictive capacity of a binary test |

2013-11-26 | asd | Simulations for adaptive seamless designs |

2013-11-26 | hda | Heteroscedastic Discriminant Analysis |

2013-11-26 | LICORS | Light Cone Reconstruction of States - Predictive State Estimation From Spatio-Temporal Data |

2013-11-25 | dils | Data-Informed Link Strength. Combine multiple-relationship networks into a single weighted network. Impute (fill-in) missing network links |

2013-11-25 | FastImputation | Learn from training data then quickly fill in missing data |

2013-11-25 | frontiles | Partial Frontier Efficiency Analysis |

2013-11-25 | humanFormat | Human-friendly formatting functions |

2013-11-25 | intamap | procedures for automated interpolation |

2013-11-24 | boxplotdbl | Double Box Plot for Two-Axes Correlation |

2013-11-24 | bpca | Biplot of Multivariate Data Based on Principal Components Analysis |

2013-11-24 | HandTill2001 | Multiple Class Area under ROC Curve |

2013-11-23 | demoKde | Kernel Density Estimation for Demonstration Purposes |

2013-11-23 | growthmodels | Nonlinear Growth Models |

2013-11-22 | BayesXsrc | R Package Distribution of the BayesX C++ Sources |

2013-11-22 | BMS | Bayesian Model Averaging Library |

2013-11-22 | DoubleCone | Test against parametric regression function |

2013-11-22 | GMMBoost | Likelihood-based Boosting for Generalized mixed models |

2013-11-22 | msgpackR | A library to serialize or unserialize data in MessagePack format |

2013-11-21 | BSagri | Statistical methods for safety assessment in agricultural field trials |

2013-11-21 | lestat | A package for LEarning STATistics |

2013-11-21 | ncf | spatial nonparametric covariance functions |

2013-11-21 | osmar | OpenStreetMap and R |

2013-11-21 | PubBias | Performs simulation study to look for publication bias, using a technique described by Ioannidis and Trikalinos; Clin Trials. 2007;4(3):245-53 |

2013-11-20 | magic | create and investigate magic squares |

2013-11-20 | PearsonDS | Pearson Distribution System |

2013-11-20 | polspline | Polynomial spline routines |

2013-11-20 | sensitivitymv | Sensitivity Analysis in Observational Studies |

2013-11-20 | vegclust | Fuzzy clustering of vegetation data |

2013-11-20 | witness | This package fits eyewitness data using Clark's (2003) WITNESS model |

2013-11-19 | gcdnet | LASSO and (adaptive) Elastic-Net penalized least squares, logistic regression, HHSVM and squared hinge loss SVM using a fast GCD algorithm |

2013-11-19 | mlDNA | Machine Learning-based Differential Network Analysis of Transcriptome Data |

2013-11-19 | somebm | some Brownian motions simulation functions |

2013-11-19 | VLF | Frequency Matrix Approach for Assessing Very Low Frequency Variants in Sequence Records |

2013-11-18 | bigmemory | Manage massive matrices with shared memory and memory-mapped files |

2013-11-18 | codadiags | Markov chain Monte Carlo burn-in based on "bridge" statistics |

2013-11-18 | eqs2lavaan | EQS Output Conversion to lavaan Functions |

2013-11-18 | MetStaT | Statistical metabolomics tools |

2013-11-18 | rbefdata | BEFdata R package |

2013-11-17 | glmmML | Generalized linear models with clustering |

2013-11-17 | RWinEdt | R Interface to WinEdt |

2013-11-17 | vscc | Variable selection for clustering and classification |

2013-11-16 | BCEs0 | Bayesian models for cost-effectiveness analysis in the presence of structural zero costs |

2013-11-16 | contrast | A collection of contrast methods |

2013-11-16 | grade | Binary Grading functions for R |

2013-11-16 | LPCM | Local principal curve methods |

2013-11-15 | DiceView | Plot methods for computer experiments design and surrogate |

2013-11-15 | DiscriMiner | Tools of the Trade for Discriminant Analysis |

2013-11-15 | PropScrRand | Propensity score methods for assigning treatment in randomized trials |

2013-11-15 | VizOR | Graphical visualization tools for complex observational data with focus on health sciences (VizOR) |

2013-11-14 | maxent | Low-memory Multinomial Logistic Regression with Support for Text Classification |

2013-11-14 | tester | Tests and checks characteristics of R objects |

2013-11-13 | diaplt | Beads Summary Plot of Ranges |

2013-11-13 | EMMIXskew | The EM Algorithm and Skew Mixture Distribution |

2013-11-13 | HaploSim | Functions to simulate haplotypes |

2013-11-13 | mreg | Fits regression models when the outcome is partially missing |

2013-11-13 | MVR | Mean-Variance Regularization |

2013-11-13 | PAGWAS | Pathway analysis methods for genomewide association data |

2013-11-13 | Rambo | The Random Subgraph Model |

2013-11-13 | StreamMetabolism | Stream Metabolism-A package for calculating single station metabolism from diurnal Oxygen curves |

2013-11-12 | colorfulVennPlot | Plot and add custom coloring to Venn diagrams for 2-dimensional, 3-dimensional and 4-dimensional data |

2013-11-12 | distory | Distance Between Phylogenetic Histories |

2013-11-12 | robustfa | An Object Oriented Solution for Robust Factor Analysis |

2013-11-12 | rtf | Rich Text Format (RTF) Output |

2013-11-11 | clv | Cluster Validation Techniques |

2013-11-11 | GenKern | Functions for generating and manipulating binned kernel density estimates |

2013-11-11 | rGammaGamma | Gamma convolutions for methylation array background correction |

2013-11-10 | FusedPCA | Community Detection via Fused Principal Component Analysis |

2013-11-09 | aqfig | Functions to help display air quality model output and monitoring data |

2013-11-09 | dielectric | Defines some physical constants and dielectric functions commonly used in optics, plasmonics |

2013-11-09 | edrGraphicalTools | Provides tools for dimension reduction methods |

2013-11-08 | brglm | Bias reduction in binomial-response generalized linear models |

2013-11-08 | circular | Circular Statistics |

2013-11-08 | CSS | Extract information from an html document with CSS selectors |

2013-11-08 | quint | Qualitative Interaction Trees |

2013-11-08 | sampling | Survey Sampling |

2013-11-08 | sdcMicroGUI | Graphical user interface for package sdcMicro |

2013-11-08 | stima | Simultaneous Threshold Interaction Modeling Algorithm |

2013-11-07 | localdepth | Local Depth |

2013-11-07 | pcse | Panel-Corrected Standard Error Estimation in R |

2013-11-07 | PERregress | Regression Functions and Datasets |

2013-11-07 | SPEI | Calculation of the Standardised Precipitation-Evapotranspiration Index |

2013-11-06 | ABCoptim | Implementation of Artificial Bee Colony (ABC) Optimization |

2013-11-06 | CPMCGLM | Correction of the pvalue after multiple coding |

2013-11-06 | Hotelling | Hotelling's T-squared test and variants |

2013-11-06 | learningr | Data and functions to accompany the book "Learning R" |

2013-11-06 | Rclusterpp | Linkable C++ clustering |

2013-11-06 | reporttools | Generate LaTeX tables of descriptive statistics |

2013-11-06 | RGenetics | R packages for genetics research |

2013-11-05 | bigtabulate | table-, tapply-, and split-like functionality for matrix and big.matrix objects |

2013-11-05 | comparison | Multivariate likelihood ratio calculation and evaluation |

2013-11-05 | EpiContactTrace | Epidemiological tool for contact tracing |

2013-11-05 | glassomix | High dimensional Mixture Graph Models selection |

2013-11-05 | shinyAce | Ace editor bindings for Shiny |

2013-11-05 | sspline | Smoothing Splines on the Sphere |

2013-11-04 | BenfordTests | Statistical Tests for Evaluating Conformity to Benford's Law |

2013-11-04 | crp.CSFP | CreditRisk+ portfolio model |

2013-11-04 | gskat | GEE_KM |

2013-11-04 | isva | Independent Surrogate Variable Analysis |

2013-11-04 | ktsolve | Configurable function for solving families of nonlinear equations |

2013-11-04 | matie | Measuring Association and Testing Independence Efficiently |

2013-11-04 | mvShapiroTest | Generalized Shapiro-Wilk test for multivariate normality |

2013-11-04 | smam | Statistical Modeling of Animal Movements |

2013-11-04 | someMTP | Some Multiple Testing Procedures |

2013-11-04 | termstrc | Zero-coupon Yield Curve Estimation |

2013-11-03 | MonoPoly | Functions to fit monotone polynomials |

2013-11-03 | pedigree | Pedigree functions |

2013-11-02 | prinsimp | Finding and plotting simple basis vectors for multivariate data |

2013-11-02 | RCPmod | Regions of common profiles modelling with mixtures-of-experts |

2013-11-01 | ccaPP | (Robust) canonical correlation analysis via projection pursuit |

2013-11-01 | PAGI | The package can identify the dysregulated KEGG pathways based on global influence from the internal effect of pathways and crosstalk between pathways |

2013-11-01 | rgcvpack | R Interface for GCVPACK Fortran Package |

2013-10-31 | ACD | Categorical data analysis with complete or missing responses |

2013-10-31 | CIFsmry | Weighted summary of cumulative incidence functions |

2013-10-31 | DDHFm | Variance Stabilization by Data-Driven Haar-Fisz (for Microarrays) |

2013-10-31 | gllm | Generalised log-linear model |

2013-10-31 | lmf | Functions for estimation and inference of selection in age-structured populations |

2013-10-31 | MRsurv | A multiplicative-regression model for relative survival |

2013-10-31 | sExtinct | Calculates the historic date of extinction given a series of sighting events |

2013-10-31 | SpatialNP | Multivariate nonparametric methods based on spatial signs and ranks |

2013-10-31 | varSelectIP | Objective Bayes Model Selection |

2013-10-30 | RCircos | Circos 2D Track Plot |

2013-10-30 | RVsharing | RVsharing |

2013-10-30 | SuppDists | Supplementary distributions |

2013-10-29 | cccd | Class Cover Catch Digraphs |

2013-10-29 | cluster.datasets | Cluster Analysis Data Sets |

2013-10-29 | Matching | Multivariate and Propensity Score Matching with Balance Optimization |

2013-10-29 | strucchange | Testing, Monitoring, and Dating Structural Changes |

2013-10-28 | BayesSAE | Bayesian Analysis of Small Area Estimation |

2013-10-28 | erboost | Nonparametric Multiple Expectile Regression via ER-Boost |

2013-10-28 | fingerprint | Functions to operate on binary fingerprint data |

2013-10-28 | IPSUR | Introduction to Probability and Statistics Using R |

2013-10-27 | mar1s | Multiplicative AR(1) with Seasonal Processes |

2013-10-26 | clpAPI | R Interface to C API of COIN-OR Clp |

2013-10-25 | CARrampsOcl | Reparameterized and marginalized posterior sampling for conditional autoregressive models, OpenCL implementation |

2013-10-25 | DCL | Claims Reserving under the Double Chain Ladder Model |

2013-10-25 | dgof | Discrete Goodness-of-Fit Tests |

2013-10-25 | hdlm | Fitting High Dimensional Linear Models |

2013-10-25 | kmconfband | Kaplan-Meier Simultaneous Confidence Band for the Survivor Function |

2013-10-25 | SPARQL | SPARQL client |

2013-10-24 | BASIX | BASIX: An efficient C/C++ toolset for R |

2013-10-24 | fastcox | Lasso and elastic-net penalized Cox's regression in high dimensions models using the cocktail algorithm |

2013-10-24 | mcgibbsit | Warnes and Raftery's MCGibbsit MCMC diagnostic |

2013-10-23 | fbRanks | Association Football (Soccer) Ranking via Poisson Regression |

2013-10-23 | globalGSA | Global Gene-Set Analysis for Association Studies |

2013-10-23 | MFHD | Multivariate Functional Halfspace Depth |

2013-10-23 | pairwiseCI | Confidence intervals for two sample comparisons |

2013-10-23 | RForcecom | RForcecom provides the connection to Force.com and Salesforce.com from R |

2013-10-22 | ACTCD | Asymptotic Classification Theory for Cognitive Diagnosis |

2013-10-22 | crch | Censored Regression with Conditional Heteroscedasticity |

2013-10-22 | HDtweedie | The Lasso for the Tweedie's Compound Poisson Model Using an IRLS-BMD Algorithm |

2013-10-22 | Rmisc | Rmisc: Ryan Miscellaneous |

2013-10-22 | smart | Sparse Multivariate Analysis via Rank Transformation |

2013-10-22 | snapshot | Gadget N-body cosmological simulation code snapshot I/O utilities |

2013-10-22 | sphereplot | Spherical plotting |

2013-10-22 | sss | Tools for importing files in the triple-s .(Standard Survey Structure) format |

2013-10-22 | surveydata | Tools to manipulate survey data |

2013-10-21 | evobiR | evobiR: evolutionary biology in R |

2013-10-21 | lomb | Lomb-Scargle Periodogram |

2013-10-21 | mQTL | Metabolomic Quantitative Trait Locus Mapping |

2013-10-21 | wavethresh | Wavelets statistics and transforms |

2013-10-20 | RRF | Regularized Random Forest |

2013-10-19 | hdrcde | Highest density regions and conditional density estimation |

2013-10-18 | datautils | Support functions for packages VBmix, semisupKernelPCA, and patchPlot |

2013-10-18 | locits | Test of stationarity and localized autocovariance |

2013-10-18 | RcmdrPlugin.UCA | UCA Rcmdr Plug-in |

2013-10-17 | knitrBootstrap | Knitr Bootstrap framework |

2013-10-17 | OIsurv | Survival analysis supplement to OpenIntro guide |

2013-10-17 | RTConnect | Tools for analyzing sales report files of iTunes Connect |

2013-10-16 | DAAGxtras | Data Sets and Functions, supplementary to DAAG |

2013-10-16 | lxb | Fast LXB file reader |

2013-10-16 | NormalGamma | Normal-gamma convolution model |

2013-10-16 | regpro | Nonparametric Regression |

2013-10-15 | corrplot | Visualization of a correlation matrix |

2013-10-15 | cvq2 | Calculate the predictive squared correlation coefficient |

2013-10-15 | Segmentor3IsBack | A Fast Segmentation Algorithm |

2013-10-15 | zoom | A spatial data visualization tool |

2013-10-14 | costat | Time series costationarity determination |

2013-10-14 | EMMAgeo | End-member modelling algorithm and supporting functions for grain-size analysis |

2013-10-13 | Correlplot | A collection of functions for graphing correlation matrices |

2013-10-13 | shinyRGL | Shiny Wrappers for RGL |

2013-10-12 | cpa | Confirmatory Path Analysis through the d-sep tests |

2013-10-12 | FITSio | FITS (Flexible Image Transport System) utilities |

2013-10-12 | mcGlobaloptim | Global optimization using Monte Carlo and Quasi Monte Carlo simulation |

2013-10-12 | rdd | Regression Discontinuity Estimation |

2013-10-12 | rsig | Robust Signature Selection for Survival Outcomes |

2013-10-11 | GlobalDeviance | Global Deviance Permutation Tests |

2013-10-11 | ICS | Tools for Exploring Multivariate Data via ICS/ICA |

2013-10-11 | LOST | Missing morphometric data simulation and estimation |

2013-10-11 | MRwarping | Multiresolution time warping for functional data |

2013-10-11 | OptHedging | Estimation of value and hedging strategy of call and put options |

2013-10-11 | orsk | Converting Odds Ratio to Relative Risk in Cohort Studies with Partial Data Information |

2013-10-10 | incReg | Incremental Multivariate Regression |

2013-10-10 | MCPAN | Multiple comparisons using normal approximation |

2013-10-10 | rseedcalc | Estimating the proportion of genetically modified stacked seeds in seedlots via multinomial group testing |

2013-10-10 | TestSurvRec | Statistical tests to compare two survival curves with recurrent events |

2013-10-09 | binMto | Asymptotic simultaneous confidence intervals for many-to-one comparisons of proportions |

2013-10-09 | popsom | Self-Organizing Maps With Population Based Convergence Criterion |

2013-10-09 | ScrabbleScore | Calculates Scrabble score for strings |

2013-10-08 | bmem | Mediation analysis with missing data using bootstrap |

2013-10-08 | caroline | A Collection of Database, Data Structure, Visualization, and Utility Functions for R |

2013-10-08 | RenextGUI | GUI for Renext |

2013-10-07 | censNID | censored NID samples |

2013-10-07 | migration.indices | Migration indices |

2013-10-05 | DAAGbio | Data Sets and Functions, for demonstrations with expression arrays and gene sequences |

2013-10-05 | fdrci | Permutation-based FDR Point and Confidence Interval Estimation |

2013-10-04 | ICC | Functions facilitating the estimation of the Intraclass Correlation Coefficient |

2013-10-04 | kitagawa | Spectral response of water wells to harmonic strain and pressure |

2013-10-04 | Renext | Renewal method for extreme values extrapolation |

2013-10-04 | TDD | Time-Domain Deconvolution of Seismometer Response |

2013-10-03 | HEAT | Health Effects of Air Pollution and Temperature (HEAT) |

2013-10-03 | powerAnalysis | Power analysis in experimental design |

2013-10-03 | proftools | Profile Output Processing Tools for R |

2013-10-03 | riv | Robust instrumental variables estimator |

2013-10-02 | SpeciesMix | Fit Mixtures of Archetype species |

2013-10-01 | dcmle | Hierarchical Models Made Easy with Data Cloning |

2013-10-01 | IsotopeR | Stable isotope analysis |

2013-10-01 | kulife | Datasets and functions from the (now non-existing) Faculty of Life Sciences, University of Copenhagen |

2013-10-01 | PsumtSim | Simulations of grouped responses relative to baseline |

2013-09-30 | AUC | Threshold independent performance measures for probabilistic classifiers |

2013-09-30 | dclone | Data Cloning and MCMC Tools for Maximum Likelihood Methods |

2013-09-30 | LCA | Localised Co-Dependency Analysis |

2013-09-30 | ParentOffspring | Conduct the Parent-Offspring Test Using Monomorphic SNP Markers |

2013-09-30 | plan | Tools for project planning |

2013-09-30 | topsis | TOPSIS method for multiple-criteria decision making (MCDM) |

2013-09-29 | coloc | Colocalisation tests of two genetic traits |

2013-09-29 | elliplot | Ellipse Summary Plot of Quantiles |

2013-09-29 | TScompare | TSdbi Comparison |

2013-09-29 | TSdata | TSdbi Illustration |

2013-09-29 | TSdbi | TSdbi (Time Series Database Interface) |

2013-09-29 | TSfame | TSdbi extensions for fame |

2013-09-29 | TSgetSymbol | TSdbi extension to connect with getSymbols |

2013-09-29 | TShistQuote | TSdbi extensions for get.hist.quote |

2013-09-29 | TSodbc | TSdbi extensions for ODBC |

2013-09-29 | TSPostgreSQL | TSdbi extensions for PostgreSQL |

2013-09-29 | TSSQLite | TSdbi extensions for SQLite |

2013-09-29 | TSxls | TSdbi extension to connect to spreadsheets |

2013-09-29 | TSzip | TSdbi extension to connect to zip files |

2013-09-28 | adagio | Discrete and Global Optimization Routines |

2013-09-27 | BAYSTAR | On Bayesian analysis of Threshold autoregressive model (BAYSTAR) |

2013-09-27 | FitARMA | FitARMA: Fit ARMA or ARIMA using fast MLE algorithm |

2013-09-27 | MRMR | Multivariate Regression Models for Reserving |

2013-09-27 | rDNA | R Bindings for the Discourse Network Analyzer |

2013-09-27 | snow | Simple Network of Workstations |

2013-09-26 | spsurvey | Spatial Survey Design and Analysis |

2013-09-26 | ssvd | Sparse SVD |

2013-09-25 | sos | Search contributed R packages, sort by package |

2013-09-25 | SubCultCon | Maximum-Likelihood Cultural Consensus Analysis with Sub-Cultures |

2013-09-25 | wgsea | Wilcoxon based gene set enrichment analysis |

2013-09-24 | asypow | Calculate Power Utilizing Asymptotic Likelihood Ratio Methods |

2013-09-24 | enRich | An R package for the analysis of multiple ChIP-seq data |

2013-09-24 | Map2NCBI | Mapping Markers to the Nearest Genomic Feature |

2013-09-24 | NPHMC | Sample Size Calculation for the Proportional Hazards Mixture Cure Model |

2013-09-24 | tframePlus | Time Frame coding kernel extensions |

2013-09-23 | animalTrack | Animal track reconstruction for high frequency 2-dimensional (2D) or 3-dimensional (3D) movement data |

2013-09-23 | EffectsRelBaseline | Test changes of a grouped response relative to baseline |

2013-09-23 | GUIDE | GUI for DErivatives in R |

2013-09-23 | hzar | Hybrid Zone Analysis using R |

2013-09-23 | LSMonteCarlo | American options pricing with Least Squares Monte Carlo method |

2013-09-23 | SAMURAI | Sensitivity Analysis of a Meta-analysis with Unpublished but Registered Analytical Investigations |

2013-09-23 | ZeligChoice | Zelig Choice Models |

2013-09-23 | ZeligGAM | General Additive Models for Zelig |

2013-09-23 | ZeligMultilevel | Multilevel Regressions for Zelig |

2013-09-22 | AtelieR | A GTK GUI for teaching basic concepts in statistical inference, and doing elementary bayesian tests |

2013-09-22 | lazy | Lazy Learning for Local Regression |

2013-09-21 | boss | Boosted One-Step Statistics: Fast and accurate approximations for GLM, GEE and Mixed models for use in GWAS |

2013-09-21 | cocron | Statistical comparisons of two or more alpha coefficients |

2013-09-21 | CrypticIBDcheck | Identifying cryptic relatedness in genetic association studies |

2013-09-21 | dataQualityR | Performs variable level data quality checks and generates summary statistics |

2013-09-21 | gmodels | Various R programming tools for model fitting |

2013-09-21 | LDheatmap | Graphical display of pairwise linkage disequilibria between SNPs |

2013-09-21 | phmm | Proportional Hazards Mixed-effects Model (PHMM) |

2013-09-21 | Zelig | Everyone's Statistical Software |

2013-09-20 | beeswarm | The bee swarm plot, an alternative to stripchart |

2013-09-20 | svapls | Surrogate variable analysis using partial least squares in a gene expression study |

2013-09-19 | Biograph | Explore life histories |

2013-09-19 | fail | File Abstraction Interface Layer (FAIL) mimicking a key-value store |

2013-09-19 | prLogistic | Estimation of Prevalence Ratios using Logistic Models |

2013-09-19 | qtlhot | Inference for QTL Hotspots |

2013-09-19 | zyp | Zhang + Yue-Pilon trends package |

2013-09-18 | Dodge | Functions for Acceptance Sampling Ideas originated by H.F. Dodge |

2013-09-18 | dynaTree | Dynamic trees for learning and design |

2013-09-17 | GABi | Framework for Generalized Subspace Pattern Mining |

2013-09-16 | akima | Interpolation of irregularly spaced data |

2013-09-16 | HMPTrees | Statistical Object Oriented Data Analysis of RDP-based Taxonomic trees from Human Microbiome Data: Modeling, Visualization, and Two-Group Comparison |

2013-09-16 | R4dfp | 4dfp MRI Image Read and Write Routines |

2013-09-16 | SMCRM | Data Sets for Statistical Methods in Customer Relationship Management by Kumar and Petersen (2012) |

2013-09-16 | speccalt | Alternative spectral clustering, with automatic estimation of k |

2013-09-16 | tripack | Triangulation of irregularly spaced data |

2013-09-16 | yhat | Interpreting Regression Effects |

2013-09-15 | forensim | Statistical tools for the interpretation of forensic DNA mixtures |

2013-09-15 | GPCSIV | GPCSIV, Generalized Principal Component of Symbolic Interval variables |

2013-09-14 | EILA | Efficient Inference of Local Ancestry |

2013-09-14 | RcmdrPlugin.qual | Rcmdr plugin for quality control course |

2013-09-14 | RobRex | Optimally robust influence curves for regression and scale |

2013-09-14 | ROptRegTS | Optimally robust estimation for regression-type models |

2013-09-13 | CLAG | An unsupervised non hierarchical clustering algorithm handling biological data |

2013-09-13 | Daim | Diagnostic accuracy of classification models |

2013-09-13 | distrEllipse | S4 classes for elliptically contoured distributions |

2013-09-13 | distrEx | Extensions of package distr |

2013-09-13 | distrRmetrics | Package distr classes for distributions from Rmetrics |

2013-09-13 | distrTeach | Extensions of package distr for teaching Stochastics/Statistics in secondary school |

2013-09-13 | distrTEst | Estimation and Testing classes based on package distr |

2013-09-13 | EcoTroph | EcoTroph R package |

2013-09-13 | ez | Easy analysis and visualization of factorial experiments |

2013-09-13 | labdsv | Ordination and Multivariate Analysis for Ecology |

2013-09-13 | RobAStBase | Robust Asymptotic Statistics |

2013-09-13 | RobLox | Optimally robust influence curves and estimators for location and scale |

2013-09-13 | RobLoxBioC | Infinitesimally robust estimators for preprocessing omics data |

2013-09-13 | ROptEst | Optimally robust estimation |

2013-09-13 | ROptEstOld | Optimally robust estimation - old version |

2013-09-13 | startupmsg | Utilities for start-up messages |

2013-09-12 | distrSim | Simulation classes based on package distr |

2013-09-12 | logcondens.mode | Compute MLE of Log-Concave Density on R with Fixed Mode, and Perform Inference for the Mode |

2013-09-12 | MLRMPA | A package for Multilinear Regression Model Population Analysis |

2013-09-12 | optpart | Optimal partitioning of similarity relations |

2013-09-12 | phalen | Phalen Algorithms and Functions |

2013-09-11 | pastis | Phylogenetic Assembly with Soft Taxonomic Inferences |

2013-09-11 | RandVar | Implementation of random variables |

2013-09-11 | relaimpo | Relative importance of regressors in linear models |

2013-09-10 | calibrate | Calibration of Scatterplot and Biplot Axes |

2013-09-10 | FREQ | FREQ: Estimate population size from capture frequencies |

2013-09-10 | NEff | Calculating effective sizes based on known demographic parameters of a population |

2013-09-10 | psidR | Build panel data sets from PSID raw data |

2013-09-10 | PSM | Non-Linear Mixed-Effects modelling using Stochastic Differential Equations |

2013-09-10 | smdata | Data to accompany Smithson & Merkle, 2013 |

2013-09-10 | splusTimeSeries | Time Series from S-PLUS |

2013-09-09 | camel | Calibrated Machine Learning |

2013-09-09 | DendSer | Dendrogram seriation: ordering for visualisation |

2013-09-09 | onemap | Software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and backcrosses |

2013-09-08 | RMongo | MongoDB Client for R |

2013-09-08 | ttwa | Travel To Work Area |

2013-09-07 | ALSCPC | Accelerated line search algorithm for simultaneous orthogonal transformation of several positive definite symmetric matrices to nearly diagonal form |

2013-09-05 | CommonTrend | Extract and plot common trends from a cointegration system. Calculate P-value for Johansen Statistics |

2013-09-05 | excel.link | Convenient way to work with data in Microsoft Excel |

2013-09-05 | G1DBN | A package performing Dynamic Bayesian Network inference |

2013-09-05 | openNLPdata | Apache OpenNLP Jars and Basic English Language Models |

2013-09-05 | survPresmooth | Presmoothed Estimation in Survival Analysis |

2013-09-04 | kelvin | Calculate solutions to the Kelvin differential equation using Bessel functions |

2013-09-04 | laser | Likelihood Analysis of Speciation/Extinction Rates from Phylogenies |

2013-09-04 | pavo | Perceptual analysis, visualization and organization of spectral color data in R |

2013-09-04 | PF | Prevented fraction |

2013-09-04 | rio | A Swiss-army knife for data file I/O |

2013-09-04 | tiff | Read and write TIFF images |

2013-09-04 | uuid | Tools for generating and handling of UUIDs |

2013-09-03 | expoTree | Calculate density dependent likelihood of a phylogenetic tree |

2013-09-03 | genetics | Population Genetics |

2013-09-03 | inlinedocs | Convert inline comments to documentation |

2013-09-03 | RFGLS | Rapid Feasible Generalized Least Squares |

2013-09-03 | sparc | Semiparametric Generalized Linear Models |

2013-09-02 | ibr | Iterative Bias Reduction |

2013-09-02 | modeltools | Tools and Classes for Statistical Models |

2013-09-02 | scrime | Analysis of High-Dimensional Categorical Data such as SNP Data |

2013-09-02 | tabplotd3 | Tabplotd3, interactive inspection of large data |

2013-08-31 | hisemi | Hierarchical Semiparametric Regression of Test Statistics |

2013-08-31 | lrmest | Different types of estimators to deal with multicollinearity |

2013-08-31 | minpack.lm | R interface to the Levenberg-Marquardt nonlinear least-squares algorithm found in MINPACK, plus support for bounds |

2013-08-30 | fExpressCertificates | fExpressCertificates - Structured Products Valuation for ExpressCertificates/Autocallables |

2013-08-30 | genMOSSplus | Application of MOSS algorithm to genome-wide association study (GWAS) |

2013-08-30 | getopt | C-like getopt behavior |

2013-08-29 | automap | Automatic interpolation package |

2013-08-28 | mmap | Map Pages of Memory |

2013-08-28 | RStorm | Simulate and Develop Streaming Processing in [R] |

2013-08-27 | EMVC | Entropy Minimization over Variable Clusters (EMVC) |

2013-08-27 | VaRES | Computes value at risk and expected shortfall for over 100 parametric distributions |

2013-08-26 | dbEmpLikeGOF | Goodness-of-fit and two sample comparison tests using sample entropy |

2013-08-26 | epoc | EPoC (Endogenous Perturbation analysis of Cancer) |

2013-08-26 | SML | Statistical Machine Learning |

2013-08-24 | soilprofile | A package to consistently represent soil properties along a soil profile |

2013-08-23 | corTools | Tools for processing data after a Genome Wide Association Study |

2013-08-23 | RcmdrPlugin.sampling | Tools for sampling in Official Statistical Surveys |

2013-08-23 | rtematres | The rtematres API package |

2013-08-23 | spaa | SPecies Association Analysis |

2013-08-23 | tlemix | Trimmed Maximum Likelihood Estimation |

2013-08-22 | fds | Functional data sets |

2013-08-22 | GeoXp | Interactive exploratory spatial data analysis |

2013-08-22 | Rjpstatdb | R interface of the Gateway to Advanced and User-friendly Statistics Service |

2013-08-22 | smss | Datasets for Agresti and Finlay's "Statistical Methods for the Social Sciences" |

2013-08-22 | ssfit | Fitting of parametric models using summary statistics |

2013-08-22 | StatDA | Statistical Analysis for Environmental Data |

2013-08-21 | intamapInteractive | procedures for automated interpolation - methods only to be used interactively, not included in intamap package |

2013-08-21 | kmlcov | Clustering longitudinal data using the likelihood as a metric of distance |

2013-08-21 | RepeatedHighDim | Global tests for expression data of high-dimensional sets of molecular features |

2013-08-21 | Rserve | Binary R server |

2013-08-21 | SOLOMON | Parentage analysis |

2013-08-21 | specificity | Specificity of personality trait-outcome (or trait-trait) associations |

2013-08-21 | spls | Sparse Partial Least Squares (SPLS) Regression and Classification |

2013-08-20 | CellularAutomaton | One-Dimensional Cellular Automata |

2013-08-20 | censReg | Censored Regression (Tobit) Models |

2013-08-20 | frontier | Stochastic Frontier Analysis |

2013-08-20 | ggparallel | Variations of Parallel Coordinate Plots for Categorical Data |

2013-08-20 | phenmod | Auxiliary functions for phenological data processing, modelling and result handling |

2013-08-20 | Rpoppler | PDF tools based on Poppler |

2013-08-20 | SEchart | SEchart |

2013-08-20 | WDI | World Development Indicators (World Bank) |

2013-08-19 | BRugs | R interface to the OpenBUGS MCMC software |

2013-08-19 | protiq | Protein (identification and) quantification based on peptide evidence |

2013-08-19 | SeqGrapheR | Simple GUI for graph based visualization of cluster of DNA sequence reads |

2013-08-19 | SynchWave | Synchrosqueezed Wavelet Transform |

2013-08-19 | vwr | Useful functions for visual word recognition research |

2013-08-17 | bitops | Bitwise Operations |

2013-08-17 | condGEE | Parameter estimation in conditional GEE for recurrent event gap times |

2013-08-17 | mda | Mixture and flexible discriminant analysis |

2013-08-17 | mixsmsn | Fitting finite mixture of scale mixture of skew-normal distributions |

2013-08-17 | profileModel | Tools for profiling inference functions for various model classes |

2013-08-16 | blm | Binomial linear and linear-expit regression |

2013-08-16 | CNVassocData | Example data sets for association analysis of CNV data |

2013-08-16 | JOP | Joint Optimization Plot |

2013-08-16 | PCS | Calculate the probability of correct selection (PCS) |

2013-08-16 | relaxnet | Relaxation of glmnet models (as in relaxed lasso, Meinshausen 2007) |

2013-08-16 | SEMID | Identifiability of linear structural equation models |

2013-08-15 | bvpSolve | Solvers for boundary value problems of ordinary differential equations |

2013-08-15 | conjoint | Conjoint analysis package |

2013-08-15 | latticeExtra | Extra Graphical Utilities Based on Lattice |

2013-08-14 | covTest | Computes covariance test for adaptive linear modelling |

2013-08-14 | IntLik | Numerical Integration for Integrated Likelihood |

2013-08-13 | denpro | Visualization of multivariate, functions, sets, and data |

2013-08-13 | EasyHTMLReport | EasyHTMLReport |

2013-08-13 | ES | Edge Selection |

2013-08-13 | PAS | Polygenic Analysis System (PAS) |

2013-08-13 | RFinanceYJ | RFinanceYJ |

2013-08-12 | rLindo | R Interface to LINDO API |

2013-08-12 | SpatioTemporal | Spatio-Temporal Model Estimation |

2013-08-10 | bmp | Read Windows Bitmap (BMP) images |

2013-08-10 | PK | Basic Non-Compartmental Pharmacokinetics |

2013-08-10 | pls | Partial Least Squares and Principal Component regression |

2013-08-09 | mallet | A wrapper around the Java machine learning tool MALLET |

2013-08-08 | DMwR | Functions and data for "Data Mining with R" |

2013-08-08 | gb | Generalize Lambda Distribution and Generalized Bootstrapping |

2013-08-08 | gRim | Graphical Interaction Models |

2013-08-08 | miRada | MicroRNA Microarray Data Analysis |

2013-08-08 | SPMS | Sub-Pathway Mining Software |

2013-08-08 | spt | Sierpinski Pedal Triangle |

2013-08-07 | DiscreteWeibull | Discrete Weibull distribution |

2013-08-07 | IASD | Model selection for index of asymmetry distribution |

2013-08-07 | memuse | Estimate the memory usage of dense, in-core, numeric objects |

2013-08-05 | coarseDataTools | A collection of functions to help with analysis of coarsely observed data |

2013-08-04 | CompLognormal | Functions for actuarial scientists |

2013-08-04 | lmeSplines | Add smoothing spline modelling capability to nlme |

2013-08-04 | nlmeU | Datasets and utility functions enhancing functionality of nlme package |

2013-08-03 | tipom | Automated measure-based classification for flint tools |

2013-08-03 | visualize | Graph Probability Distributions with User Supplied Parameters and Stats |

2013-08-02 | AMGET | Post-processing tool for ADAPT 5 |

2013-08-02 | dfcrm | Dose-finding by the continual reassessment method |

2013-08-02 | ltsbase | Ridge and Liu Estimates based on LTS (Least Trimmed Squares) Method |

2013-08-02 | RSclient | Client for Rserve |

2013-08-02 | sme | Smoothing-splines Mixed-effects Models |

2013-08-02 | timesboot | Bootstrap computations for time series objects |

2013-08-01 | BNPdensity | Ferguson-Klass type algorithm for posterior normalized random measures |

2013-08-01 | compactr | Creates empty plots with compact axis notation |

2013-08-01 | rbmn | Handling Linear Gaussian Bayesian Networks |

2013-07-31 | acopula | Modelling dependence with multivariate Archimax (or any user-defined continuous) copulas |

2013-07-31 | FNN | Fast Nearest Neighbor Search Algorithms and Applications |

2013-07-31 | gPCA | Batch Effect Detection via Guided Principal Components Analysis |

2013-07-31 | needy | needy |

2013-07-31 | SparseGrid | Sparse grid integration in R |

2013-07-30 | COBRA | Nonlinear Aggregation of Predictors |

2013-07-30 | epr | Easy polynomial regression |

2013-07-30 | Lambda4 | Collection of Internal Consistency Reliability Coefficients |

2013-07-29 | pathdiagram | Basic functions for drawing path diagrams |

2013-07-29 | robeth | R functions for robust statistics |

2013-07-29 | SimultAnR | Correspondence and Simultaneous Analysis |

2013-07-29 | widenet | Penalized Regression with Polynomial Basis Expansions |

2013-07-28 | MPINet | The package can implement the network-based metabolite pathway identification of pathways |

2013-07-28 | pwt | Penn World Table (Versions 5.6, 6.x, 7.x) |

2013-07-28 | pwt8 | Penn World Table (Version 8.0) |

2013-07-28 | Rz | GUI Tool for Data Management like SPSS or Stata |

2013-07-27 | eigenprcomp | Computes confidence intervals for principal components |

2013-07-26 | crawl | Fit continuous-time correlated random walk models to animal movement data |

2013-07-26 | ebdbNet | Empirical Bayes Estimation of Dynamic Bayesian Networks |

2013-07-26 | Myrrixjars | External jars required for package Myrrix |

2013-07-26 | Nippon | Japanese utility functions and data |

2013-07-25 | AnDE | An extended Bayesian Learning Technique developed by Dr. Geoff Webb |

2013-07-25 | gains | Gains Table Package |

2013-07-24 | hint | Tools for hypothesis testing based on Hypergeometric Intersection distributions |

2013-07-24 | RGCCA | RGCCA and Sparse GCCA for multi-block data analysis |

2013-07-24 | RSAGA | SAGA Geoprocessing and Terrain Analysis in R |

2013-07-24 | RxCEcolInf | R x C Ecological Inference With Optional Incorporation of Survey Information |

2013-07-24 | tgram | Functions to compute and plot tracheidograms |

2013-07-23 | ABCp2 | Approximate Bayesian Computational model for estimating P2 |

2013-07-23 | directlabels | Direct labels for multicolor plots in lattice or ggplot2 |

2013-07-23 | neuroblastoma | Neuroblastoma copy number profiles |

2013-07-23 | PatternClass | Class-focused pattern metric comparisons using simulation |

2013-07-23 | usdm | Uncertainty analysis for species distribution models |

2013-07-22 | anametrix | Bidirectional connector to Anametrix API |

2013-07-22 | somplot | Visualisation of hexagonal Kohonen maps |

2013-07-22 | vars | VAR Modelling |

2013-07-22 | wordmatch | Matches words in one file with words in another file |

2013-07-21 | mondate | Keep track of dates in terms of months |

2013-07-21 | suRtex | LaTeX descriptive statistic reporting for survey data |

2013-07-19 | BsMD | Bayes Screening and Model Discrimination |

2013-07-18 | bride | Brier score decomposition of probabilistic forecasts for binary events |

2013-07-18 | Causata | Analysis utilities for binary classification and Causata users |

2013-07-18 | DescribeDisplay | R interface to DescribeDisplay (GGobi plugin) |

2013-07-18 | rsem | Robust Structural Equation Modeling with Missing Data and Auxiliary Variables |

2013-07-17 | maRketSim | Market simulator for R |

2013-07-16 | LogrankA | Logrank Test for Aggregated Survival Data |

2013-07-16 | QSARdata | Quantitative Structure Activity Relationship (QSAR) Data Sets |

2013-07-15 | fuzzyRankTests | Fuzzy Rank Tests and Confidence Intervals |

2013-07-15 | rexpokit | R wrappers for EXPOKIT; other matrix functions |

2013-07-15 | straweib | Stratified Weibull Regression Model |

2013-07-14 | gpk | 100 Data Sets for Statistics Education |

2013-07-14 | oblique.tree | Oblique Trees for Classification Data |

2013-07-13 | kza | Kolmogorov-Zurbenko Adaptive Filters |

2013-07-13 | phyloclim | Integrating Phylogenetics and Climatic Niche Modeling |

2013-07-12 | desire | Desirability functions in R |

2013-07-12 | icaOcularCorrection | Independent Components Analysis (ICA) based artifact correction |

2013-07-12 | LS2W | Locally stationary two-dimensional wavelet process estimation scheme |

2013-07-12 | PROFANCY | The package can prioritize candidate disease metabolites based on global functional relationships between metabolites in the context of metabolic pathways |

2013-07-11 | DistatisR | DiSTATIS Three Way Metric Multidimensional Scaling |

2013-07-11 | munsell | Munsell colour system |

2013-07-11 | optBiomarker | Estimation of optimal number of biomarkers for two-group microarray based classifications at a given error tolerance level for various classification rules |

2013-07-11 | splus2R | Supplemental S-PLUS functionality in R |

2013-07-11 | switchnpreg | Switching nonparametric regression models for a single curve and functional data |

2013-07-10 | LoopAnalyst | A collection of tools to conduct Levins' Loop Analysis |

2013-07-10 | MDM | Multinomial Diversity Model |

2013-07-09 | backtest | Exploring portfolio-based conjectures about financial instruments |

2013-07-09 | EnvNicheR | Environmental niche |

2013-07-09 | ipfp | Fast implementation of the iterative proportional fitting procedure in C |

2013-07-09 | portfolioSim | Framework for simulating equity portfolio strategies |

2013-07-09 | VDA | VDA |

2013-07-08 | fast | Implementation of the Fourier Amplitude Sensitivity Test (FAST) |

2013-07-06 | sGPCA | Sparse Generalized Principal Component Analysis |

2013-07-06 | smoothie | Two-dimensional Field Smoothing |

2013-07-05 | EDR | Estimation of the effective dimension reduction (EDR) space |

2013-07-05 | MADAM | This package provides some basic methods for meta-analysis |

2013-07-04 | ExactCIdiff | Inductive Confidence Intervals for the difference between two proportions |

2013-07-04 | LDcorSV | Linkage disequilibrium corrected by the structure and the relatedness |

2013-07-03 | abundant | Abundant regression and high-dimensional principal fitted components |

2013-07-03 | editrules | R package for parsing, applying, and manipulating data cleaning rules |

2013-07-03 | QZ | Generalized Eigenvalues and QZ Decomposition |

2013-07-03 | SNPtools | Accessing, subsetting and plotting mouse SNPs |

2013-07-02 | clusterGenomics | Identifying clusters in genomics data by recursive partitioning |

2013-07-02 | flexclust | Flexible Cluster Algorithms |

2013-07-02 | retimes | Reaction Time Analysis |

2013-07-01 | DTK | Dunnett-Tukey-Kramer Pairwise Multiple Comparison Test Adjusted for Unequal Variances and Unequal Sample Sizes |

2013-07-01 | pathClass | Classification using biological pathways as prior knowledge |

2013-06-30 | AlleleRetain | Allele Retention, Inbreeding, and Demography |

2013-06-29 | sjdbc | JDBC Driver Interface |

2013-06-29 | tibbrConnector | R interface to tibbr |

2013-06-28 | FField | Force field simulation for a set of points |

2013-06-28 | FisherEM | The Fisher-EM algorithm |

2013-06-28 | loglognorm | Double log normal distribution functions |

2013-06-28 | MatchIt | MatchIt: Nonparametric Preprocessing for Parametric Casual Inference |

2013-06-28 | r2dRue | 2d Rain Use Efficience model |

2013-06-28 | rgenoud | R version of GENetic Optimization Using Derivatives |

2013-06-27 | b6e6rl | Adaptive differential evolution, b6e6rl variant |

2013-06-27 | itree | Tools for classification and regression trees, with an emphasis on interpretability |

2013-06-27 | MAMSE | Calculation of Minimum Averaged Mean Squared Error (MAMSE) weights |

2013-06-27 | PCICt | Implementation of POSIXct work-alike for 365 and 360 day calendars |

2013-06-26 | distillery | Method Functions for Confidence Intervals and to Distill Information from an Object |

2013-06-26 | logistf | Firth's bias reduced logistic regression |

2013-06-26 | rv | Simulation-based random variable objects |

2013-06-26 | SPOT | Sequential Parameter Optimization |

2013-06-25 | LICurvature | Sensitivity Analysis for Case Weight in Normal Linear Regression |

2013-06-24 | fArma | ARMA Time Series Modelling |

2013-06-24 | fAsianOptions | EBM and Asian Option Valuation |

2013-06-24 | fNonlinear | Nonlinear and Chaotic Time Series Modelling |

2013-06-24 | fOptions | Basics of Option Valuation |

2013-06-24 | fUnitRoots | Trends and Unit Roots |

2013-06-24 | tsModel | Time Series Modeling for Air Pollution and Health |

2013-06-23 | crrSC | Competing risks regression for Stratified and Clustered data |

2013-06-21 | ArrayBin | Binarization of numeric data arrays |

2013-06-21 | cfa | Analysis of configuration frequencies (CFA) |

2013-06-20 | XML | Tools for parsing and generating XML within R and S-Plus |

2013-06-19 | FRAPO | Financial Risk Modelling and Portfolio Optimisation with R |

2013-06-19 | gwrr | Fits geographically weighted regression models with diagnostic tools |

2013-06-19 | Mcomp | Data from the M-competitions |

2013-06-19 | MConjoint | Conjoint Analysis through Averaging of Multiple Analyses |

2013-06-19 | RSiena | Siena - Simulation Investigation for Empirical Network Analysis |

2013-06-19 | SmithWilsonYieldCurve | Smith-Wilson Yield Curve Construction |

2013-06-18 | aods3 | Analysis of Overdispersed Data using S3 methods |

2013-06-18 | glmlep | Fit GLM with LEP-based penalized maximum likelihood |

2013-06-18 | rsgcc | Gini methodology-based correlation and clustering analysis of microarray and RNA-Seq gene expression data |

2013-06-18 | ZeBook | ZeBook Working with dynamic models for agriculture and environment |

2013-06-17 | Bolstad | Bolstad functions |

2013-06-17 | Bolstad2 | Bolstad functions |

2013-06-17 | MCPerm | A Monte Carlo permutation method for multiple test correlation |

2013-06-17 | twiddler | Interactive manipulation of R expressions |

2013-06-16 | CompQuadForm | Distribution function of quadratic forms in normal variables |

2013-06-16 | JointRegBC | Joint Modelling of Mixed Correlated Binary and Continuous Responses : A Latent Variable Approach |

2013-06-16 | nsga2R | Elitist Non-dominated Sorting Genetic Algorithm based on R |

2013-06-15 | MExPosition | Multi-table ExPosition |

2013-06-14 | miscF | Miscellaneous Functions |

2013-06-14 | ordPens | Selection and/or Smoothing of Ordinal Predictors |

2013-06-13 | depthTools | Depth Tools Package |

2013-06-13 | govStatJPN | functions to get public survey data in Japan |

2013-06-13 | PDSCE | Positive definite sparse covariance estimators |

2013-06-13 | RcmdrPlugin.depthTools | R commander Depth Tools Plug-In |

2013-06-12 | cobs99 | Constrained B-splines – outdated 1999 version |

2013-06-12 | SoDA | Functions and Examples for "Software for Data Analysis" |

2013-06-12 | stabledist | Stable Distribution Functions |

2013-06-11 | ISLR | Data for An Introduction to Statistical Learning with Applications in R |

2013-06-11 | MRCE | Multivariate regression with covariance estimation |

2013-06-11 | tbdiag | Functions for tuberculosis diagnostics research |

2013-06-10 | cabootcrs | Bootstrap Confidence Regions for Correspondence Analysis |

2013-06-10 | covLCA | Latent Class Models with Covariate Effects on Underlying and Measured Variables |

2013-06-10 | sparktex | Generate LaTeX sparklines in R |

2013-06-09 | MNP | R Package for Fitting the Multinomial Probit Model |

2013-06-08 | lshorth | The Length of the Shorth |

2013-06-08 | pbs | Periodic B Splines |

2013-06-06 | IUPS | Incorporating Uncertainties in Propensity Scores |

2013-06-06 | LVMMCOR | A Latent Variable Model for Mixed Continuous and Ordinal Responses |

2013-06-06 | urca | Unit root and cointegration tests for time series data |

2013-06-05 | batch | Batching Routines in Parallel and Passing Command-Line Arguments to R |

2013-06-04 | FGalgorithm | Flury and Gautschi algorithms |

2013-06-04 | mopsocd | MOPSOCD: Multi-objective Particle Swarm Optimization with Crowding Distance |

2013-06-04 | NPMVCP | Nonparametric Multivariate Change Point Model |

2013-06-04 | RSADBE | Data related to the book "R Statistical Application Development by Example" |

2013-06-04 | skatMeta | Efficient meta analysis for the SKAT test |

2013-06-03 | ahaz | Regularization for semiparametric additive hazards regression |

2013-06-03 | l2boost | l2boost - Friedman's boosting algorithm for regularized linear regression |

2013-06-03 | nlts | (non)linear time series analysis |

2013-06-03 | RobustRankAggreg | Methods for robust rank aggregation |

2013-06-03 | TrialSize | R functions in Chapter 3,4,6,7,9,10,11,12,14,15 |

2013-05-31 | KoNLP | Korean NLP Package |

2013-05-31 | protoclass | Interpretable classification with prototypes |

2013-05-30 | metamisc | Diagnostic and prognostic meta analysis (metamisc) |

2013-05-29 | branchLars | Cost-efficient Variable Selection |

2013-05-29 | OneTwoSamples | Deal with one and two (normal) samples |

2013-05-28 | CoinMinD | Simultaneous Confidence Interval for Multinomial Proportion |

2013-05-28 | DTMCPack | Suite of functions related to discrete-time discrete-state Markov Chains |

2013-05-28 | fitTetra | fitTetra is an R package for assigning tetraploid genotype scores |

2013-05-28 | RVtests | Rare Variant Tests |

2013-05-27 | compareODM | comparison of medical forms in CDISC ODM format |

2013-05-27 | eba | Elimination-by-Aspects (EBA) Models |

2013-05-26 | ggROC | package for roc curve plot with ggplot2 |

2013-05-26 | McSpatial | Nonparametric spatial data analysis |

2013-05-25 | profdpm | Profile Dirichlet Process Mixtures |

2013-05-25 | SphericalCubature | Numerical integration over spheres and balls in n-dimensions; multivariate polar coordinates |

2013-05-24 | BSquare | Bayesian Simultaneous Quantile Regression |

2013-05-24 | lbiassurv | Length-biased correction to survival curve estimation |

2013-05-24 | tlnise | Two-level normal independent sampling estimation |

2013-05-23 | Haplin | Analyzing case-parent triad and/or case-control data with SNP haplotypes |

2013-05-23 | InferenceSMR | Inference about the standardized mortality ratio when evaluating the effect of a screening program on survival |

2013-05-23 | SODC | Optimal Discriminant Clustering(ODC) and Sparse Optimal Discriminant Clustering(SODC) |

2013-05-22 | cyphid | Cycle and Phase Identification for mastication data |

2013-05-22 | parallelize.dynamic | Automate parallelization of function calls by means of dynamic code analysis |

2013-05-22 | trueskill | Implementation the TrueSkill algorithm in R |

2013-05-21 | fastICA | FastICA Algorithms to perform ICA and Projection Pursuit |

2013-05-21 | rPlant | R interface to the iPlant Discovery Environment |

2013-05-21 | SetMethods | SetMethods: A Package Companion to "Set-Theoretic Methods for the Social Sciences" |

2013-05-20 | Comp2ROC | Compare two ROC curves that intersect |

2013-05-20 | pom | POM - Patch Occupancy Models |

2013-05-19 | pnmtrem | Probit-Normal Marginalized Transition Random Effects Models |

2013-05-19 | probsvm | probsvm: Class probability estimation for Support Vector Machines |

2013-05-18 | CfEstimateQuantiles | Estimate quantiles using any order Cornish-Fisher expansion |

2013-05-18 | SMFI5 | R functions and data from Chapter 5 of 'Statistical Methods for Financial Engineering' |

2013-05-17 | CDLasso | Coordinate Descent Algorithms for Lasso Penalized L1, L2, and Logistic Regression |

2013-05-16 | biglm | bounded memory linear and generalized linear models |

2013-05-16 | grnn | General regression neural network |

2013-05-16 | PurBayes | Bayesian Estimation of Tumor Purity and Clonality |

2013-05-15 | ABCExtremes | ABC Extremes |

2013-05-15 | Nozzle.R1 | Nozzle Reports |

2013-05-15 | RDSTK | An R wrapper for the Data Science Toolkit API |

2013-05-14 | dsample | Discretization-based Direct Random Sample Generation |

2013-05-14 | sos4R | An R client for the OGC Sensor Observation Service |

2013-05-14 | Tinflex | Tinflex - Universal non-uniform random number generator |

2013-05-13 | csSAM | csSAM - cell-specific Significance Analysis of Microarrays |

2013-05-13 | hgam | High-dimensional Additive Modelling |

2013-05-13 | OpenMPController | Control number of OpenMP threads dynamically |

2013-05-12 | coefplot | Plots Coefficients from Fitted Models |

2013-05-11 | ergmharris | Local Health Department network data set |

2013-05-10 | ArDec | Time series autoregressive-based decomposition |

2013-05-10 | covRobust | Robust Covariance Estimation via Nearest Neighbor Cleaning |

2013-05-10 | CoxBoost | Cox models by likelihood based boosting for a single survival endpoint or competing risks |

2013-05-10 | GAMBoost | Generalized linear and additive models by likelihood based boosting |

2013-05-09 | gputools | A few GPU enabled functions |

2013-05-09 | HMP | Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP |

2013-05-09 | NHEMOtree | Non-hierarchical evolutionary multi-objective tree learner to perform cost-sensitive classification |

2013-05-09 | timeline | Timelines for a Grammar of Graphics |

2013-05-09 | wpp2010 | World Population Prospects 2010 |

2013-05-08 | eventstudies | Event study and extreme event analysis |

2013-05-08 | lisrelToR | Import output from LISREL into R |

2013-05-08 | rapport | A report templating system |

2013-05-07 | CircNNTSR | CircNNTSR: An R package for the statistical analysis of circular data using nonnegative trigonometric sums (NNTS) models |

2013-05-07 | corrsieve | CorrSieve |

2013-05-07 | cshapes | CShapes Dataset and Utilities |

2013-05-07 | ExpDes | Experimental Designs package |

2013-05-07 | ExpDes.pt | Pacote Experimental Designs (Portuguese) |

2013-05-07 | InteractiveIGraph | interactive network analysis and visualization |

2013-05-07 | pnn | Probabilistic neural networks |

2013-05-06 | bdoc | Bayesian Discrete Ordered Classification of DNA Barcodes |

2013-05-06 | GibbsACOV | Gibbs Sampler for One-Way Mixed-Effects ANOVA and ANCOVA Models |

2013-05-06 | simex | SIMEX- and MCSIMEX-Algorithm for measurement error models |

2013-05-04 | gsbDesign | Group Sequential Bayes Design |

2013-05-04 | HydroMe | R codes for estimating water retention and infiltration model parameters using experimental data |

2013-05-03 | bnpmr | Bayesian monotonic nonparametric regression |

2013-05-03 | diffdepprop | Calculates Confidence Intervals for two Dependent Proportions |

2013-05-03 | iteRates | Parametric rate comparison |

2013-05-03 | mixsep | Forensic Genetics DNA Mixture Separation |

2013-05-02 | RAP | Reversal Association Pattern |

2013-05-02 | SNPMClust | A bivariate Gaussian genotype clustering and calling algorithm for Illumina microarrays |

2013-05-02 | spcosa | Spatial Coverage Sampling and Random Sampling from Compact Geographical Strata |

2013-05-02 | vardiag | A package for variogram diagnostics |

2013-05-01 | downloader | A package for downloading files over http and https |

2013-05-01 | fGarch | Rmetrics - Autoregressive Conditional Heteroskedastic Modelling |

2013-05-01 | MCMCpack | Markov chain Monte Carlo (MCMC) Package |

2013-05-01 | RnavGraphImageData | Some image data used in the RnavGraph package demos |

2013-04-30 | MAMA | Meta-Analysis of MicroArray |

2013-04-30 | PhViD | PhViD: an R package for PharmacoVigilance signal Detection |

2013-04-29 | tseriesChaos | Analysis of nonlinear time series |

2013-04-28 | whisker | {{mustache}} for R, logicless templating |

2013-04-27 | MicroStrategyR | MicroStrategyR Package |

2013-04-26 | FuzzyToolkitUoN | Type 1 Fuzzy Logic Toolkit |

2013-04-25 | dbEmpLikeNorm | Test for joint assessment of normality |

2013-04-25 | hsmm | Hidden Semi Markov Models |

2013-04-25 | princurve | Fits a Principal Curve in Arbitrary Dimension |

2013-04-25 | sendplot | Tool for sending interactive plots with tool-tip content |

2013-04-25 | SpherWave | Spherical Wavelets and SW-based Spatially Adaptive Methods |

2013-04-24 | DetSel | A computer program to detect markers responding to selection |

2013-04-24 | dirmult | Estimation in Dirichlet-Multinomial distribution |

2013-04-24 | lars | Least Angle Regression, Lasso and Forward Stagewise |

2013-04-24 | logspline | Logspline density estimation routines |

2013-04-23 | GENEAread | Package For Reading Binary files |

2013-04-23 | R2G2 | Converting R CRAN outputs into Google Earth |

2013-04-23 | siar | Stable Isotope Analysis in R |

2013-04-22 | TESS | Fast simulation of reconstructed phylogenetic trees under time-dependent birth-death processes |

2013-04-21 | causalsens | Selection Bias Approach to Sensitivity Analysis for Causal Effects |

2013-04-21 | mgraph | Graphing map attributes and non-map variables in R |

2013-04-20 | cdb | Reading and Writing Constant DataBases |

2013-04-20 | ibdreg | Regression Methods for IBD Linkage With Covariates |

2013-04-20 | locfit | Local Regression, Likelihood and Density Estimation |

2013-04-19 | boussinesq | Analytic Solutions for (ground-water) Boussinesq Equation |

2013-04-19 | FrF2.catlg128 | Catalogues of resolution IV 128 run 2-level fractional factorials up to 33 factors that do have 5-letter words |

2013-04-19 | PairedData | Paired Data Analysis |

2013-04-19 | repolr | Repeated measures proportional odds logistic regression |

2013-04-19 | spatialCovariance | Computation of spatial covariance matrices for data on rectangles |

2013-04-18 | glmdm | R Code for Simulation of GLMDM |

2013-04-18 | Iso | Functions to perform isotonic regression |

2013-04-18 | madsim | A Flexible Microarray Data Simulation Model |

2013-04-18 | spikeslab | Prediction and variable selection using spike and slab regression |

2013-04-18 | threg | Threshold Regression |

2013-04-17 | catspec | Special models for categorical variables |

2013-04-17 | CheckDigit | Calculate and verify check digits |

2013-04-17 | decon | Deconvolution Estimation in Measurement Error Models |

2013-04-17 | GAIPE | Graphical Extension with Accuracy in Parameter Estimation (GAIPE) |

2013-04-17 | lpridge | Local Polynomial (Ridge) Regression |

2013-04-17 | mvbutils | Workspace organization, code and documentation editing, package prep and editing, etc |

2013-04-17 | quadprog | Functions to solve Quadratic Programming Problems |

2013-04-17 | rmp | Rounded Mixture Package. Performs probability mass function estimation with Dirichlet process mixtures of rounded kernels |

2013-04-16 | appell | Compute Appell's F1 hypergeometric function |

2013-04-16 | FRB | Fast and Robust Bootstrap |

2013-04-16 | FWDselect | Selecting variables in regression models |

2013-04-16 | JGL | Performs the Joint Graphical Lasso for sparse inverse covariance estimation on multiple classes |

2013-04-16 | pspline | Penalized Smoothing Splines |

2013-04-16 | qtlbim | QTL Bayesian Interval Mapping |

2013-04-16 | spacejam | Sparse conditional graph estimation with joint additive models |

2013-04-15 | peplib | Peptide Library Analysis Methods |

2013-04-15 | R2Cuba | Multidimensional Numerical Integration |

2013-04-13 | DeducerSpatial | Deducer for spatial data analysis |

2013-04-13 | ellipse | Functions for drawing ellipses and ellipse-like confidence regions |

2013-04-13 | FBFsearch | Algorithm for searching the space of Gaussian directed acyclic graphical models through moment fractional Bayes factors |

2013-04-13 | OpenStreetMap | Access to open street map raster images |

2013-04-12 | glmulti | Model selection and multimodel inference made easy |

2013-04-12 | logging | R logging package |

2013-04-12 | orderbook | Orderbook visualization/Charting software |

2013-04-12 | sideChannelAttack | Side Channel Attack |

2013-04-10 | clinUtiDNA | Clinical Utility of DNA Testing |

2013-04-10 | deseasonalize | Optimal deseasonalization for geophysical time series using AR fitting |

2013-04-10 | multilevel | Multilevel Functions |

2013-04-09 | phcfM | Modelling anthropogenic deforestation |

2013-04-09 | rbugs | Fusing R and OpenBugs and Beyond |

2013-04-08 | df2json | Convert a dataframe to JSON |

2013-04-08 | LVQTools | Learning Vector Quantization Tools |

2013-04-08 | peperr | Parallelised Estimation of Prediction Error |

2013-04-08 | survIDINRI | IDI and NRI for comparing competing risk prediction models with censored survival data |

2013-04-07 | bc3net | BC3NET |

2013-04-07 | difR | Collection of methods to detect dichotomous differential item functioning (DIF) in psychometrics |

2013-04-07 | popgen | Statistical and Population Genetics |

2013-04-07 | R2WinBUGS | Running WinBUGS and OpenBUGS from R / S-PLUS |

2013-04-07 | SportsAnalytics | Infrastructure for Sports Analytics |

2013-04-05 | concreg | Concordance regression |

2013-04-05 | persiandictionary | English to Persian dictionary |

2013-04-05 | PlotRegionHighlighter | Creates an envelope that surrounds a set of points plotted in a two dimensional space |

2013-04-04 | BaySIC | Bayesian Analysis of Significantly Mutated Genes in Cancer |

2013-04-04 | GeoLight | Analysis of light based geolocator data |

2013-04-04 | inflection | Finds the inflection point of a curve |

2013-04-04 | relsurv | Relative survival |

2013-04-03 | lint | Tools to check R code style |

2013-04-03 | magma | Matrix Algebra on GPU and Multicore Architectures |

2013-04-03 | ncbit | retrieve and build NBCI taxonomic data |

2013-04-03 | noweb | Noweb system for R |

2013-04-03 | trioGxE | A data smoothing approach to explore and test gene-environment interaction in case-parent trio data |

2013-04-02 | ConvCalendar | Converts dates between calendars |

2013-04-02 | ENmisc | Neuwirth miscellaneous |

2013-04-02 | infutil | Information Utility |

2013-04-02 | MLEcens | Computation of the MLE for bivariate (interval) censored data |

2013-04-02 | SGL | Fit a GLM (or cox model) with a combination of lasso and group lasso regularization |

2013-04-02 | SPIn | Simulation-efficient Shortest Probability Intervals |

2013-04-01 | biganalytics | A library of utilities for big.matrix objects of package bigmemory |

2013-04-01 | gpclib | General Polygon Clipping Library for R |

2013-04-01 | optAUC | Optimal Combinations of Diagnostic Tests Based on AUC |

2013-03-31 | nice | Get or Set UNIX Niceness |

2013-03-30 | pbatR | P2BAT |

2013-03-30 | thgenetics | Genetic Rare Variants Tests |

2013-03-30 | TSHRC | Two Stage Hazard Rate Comparison |

2013-03-29 | experiment | experiment: R package for designing and analyzing randomized experiments |

2013-03-29 | Ritc | Isothermal Titration Calorimetry (ITC) Data Analysis |

2013-03-28 | ICE | Iterated Conditional Expectation |

2013-03-28 | robustX | eXperimental Functionality for Robust Statistics |

2013-03-28 | sprsmdl | Sparse modeling toolkit |

2013-03-27 | farsi | Translate integers into persian |

2013-03-27 | meteogRam | Tools for plotting meteograms |

2013-03-27 | RPostgreSQL | R interface to the PostgreSQL database system |

2013-03-27 | severity | Mayo's Post-data Severity Evaluation |

2013-03-26 | A3 | A3: Accurate, Adaptable, and Accessible Error Metrics for Predictive Models |

2013-03-26 | Bayesthresh | Bayesian thresholds mixed-effects models for categorical data |

2013-03-26 | HI | Simulation from distributions supported by nested hyperplanes |

2013-03-26 | spatialkernel | Nonparameteric estimation of spatial segregation in a multivariate point process |

2013-03-25 | gaoptim | Genetic Algorithm optimization for real-based and permutation-based problems |

2013-03-25 | HAP.ROR | Recursive Organizer (ROR) |

2013-03-25 | hashFunction | A collection of non-cryptographic hash functions |

2013-03-25 | PMA | Penalized Multivariate Analysis |

2013-03-23 | crimCV | Group-Based Modelling of Longitudinal Data |

2013-03-23 | flsa | Path algorithm for the general Fused Lasso Signal Approximator |

2013-03-23 | hcc | Hidden correlation check |

2013-03-22 | FluOMatic | Estimation of background-subtracted fluorescence data |

2013-03-22 | orientlib | Support for orientation data |

2013-03-21 | MSeasyTkGUI | MSeasy Tcl/Tk Graphical User Interface |

2013-03-20 | DATforDCEMRI | Deconvolution Analysis Tool for Dynamic Contrast Enhanced MRI |

2013-03-20 | MSeasy | Preprocessing of Gas Chromatography-Mass Spectrometry (GC-MS) data |

2013-03-20 | rCarto | This package builds maps with a full cartographic layout |

2013-03-19 | AnalyzeFMRI | Functions for analysis of fMRI datasets stored in the ANALYZE or NIFTI format |

2013-03-19 | BiplotGUI | Interactive Biplots in R |

2013-03-19 | DeducerExtras | Additional dialogs and functions for Deducer |

2013-03-19 | QCAGUI | QCA Graphical User Interface |

2013-03-19 | sets | Sets, Generalized Sets, Customizable Sets and Intervals |

2013-03-19 | tpe | Tree preserving embedding |

2013-03-18 | crossdes | Construction of Crossover Designs |

2013-03-18 | cvplogistic | Penalized Logistic Regression Model using Majorization Minimization by Coordinate Descent (MMCD) Algorithm |

2013-03-18 | marqLevAlg | An algorithm for least-squares curve fitting |

2013-03-18 | MixtureInf | Inference for Finite Mixture Models |

2013-03-17 | ensembleMOS | Ensemble Model Output Statistics |

2013-03-17 | TTR | Technical Trading Rules |

2013-03-16 | FitAR | Subset AR Model Fitting |

2013-03-15 | fImport | Rmetrics - Economic and Financial Data Import |

2013-03-14 | BlockMessage | Creates strings that show a text message in 8 by 8 block letters |

2013-03-14 | CUMP | Analyze Multivariate Phenotypes by Combining Univariate results |

2013-03-14 | fpp | Data for "Forecasting: principles and practice" |

2013-03-14 | GriegSmith | Uses Grieg-Smith method on 2 dimentional spatial data |

2013-03-14 | hsicCCA | Canonical Correlation Analysis based on Kernel Independence Measures |

2013-03-13 | bams | Breakpoint annotation model smoothing |

2013-03-13 | BayHap | Bayesian analysis of haplotype association using Markov Chain Monte Carlo |

2013-03-13 | dixon | Nearest Neighbour Contingency Table Analysis |

2013-03-13 | ecespa | Functions for spatial point pattern analysis |

2013-03-13 | miscTools | Miscellaneous Tools and Utilities |

2013-03-13 | mpmcorrelogram | Multivariate Partial Mantel Correlogram |

2013-03-13 | perry | Resampling-based prediction error estimation for regression models |

2013-03-13 | swamp | Visualization, analysis and adjustment of high-dimensional data in respect to sample annotations |

2013-03-13 | zoeppritz | Zoeppritz Equations |

2013-03-12 | ber | Batch Effects Removal |

2013-03-12 | kappaSize | Sample Size Estimation Functions for Studies of Interobserver Agreement |

2013-03-12 | penDvine | Flexible Pair-Copula Estimation in D-vines using Bivariate Penalized Splines |

2013-03-12 | qtlmt | Tools for mapping multiple complex traits |

2013-03-11 | cosso | Fit Regularized Nonparametric Regression Models Using COSSO Penalty |

2013-03-11 | patchPlot | Scatterplots of image patches |

2013-03-11 | semisupKernelPCA | Kernel PCA projection, and semi-supervised variant |

2013-03-08 | BBMM | Brownian bridge movement model |

2013-03-08 | EpiEstim | EpiEstim: a package to estimate time varying reproduction numbers from epidemic curves |

2013-03-08 | nls2 | Non-linear regression with brute force |

2013-03-08 | rawFasta | Memory efficient handling of FASTA sequence files, a pure R implementation |

2013-03-07 | GESTr | Gene Expression State Transformation |

2013-03-07 | LDOD | Finding Locally D-optimal optimal designs for some nonlinear and generalized linear models |

2013-03-06 | IM | Orthogonal Moment Analysis |

2013-03-04 | bifactorial | Inferences for bi- and trifactorial trial designs |

2013-03-04 | MAR1 | Multivariate Autoregressive Modeling for Analysis of Community Time-Series Data |

2013-03-04 | nets | Network Estimation for Time Series |

2013-03-04 | SpatialExtremes | Modelling Spatial Extremes |

2013-03-04 | StandardizeText | Standardize Text |

2013-03-04 | survexp.fr | Relative survival, AER and SMR based on French death rates |

2013-03-03 | ringbuffer | Ring buffer (circular buffer) data structure |

2013-03-01 | AtmRay | Acoustic Traveltime Calculations for 1-D Atmospheric Models |

2013-03-01 | perARMA | Package for Periodic Time Series Analysis |

2013-03-01 | rCMA | CMA-ES R-to-Java interface |

2013-03-01 | sgeostat | An Object-oriented Framework for Geostatistical Modeling in S+ |

2013-02-28 | heatex | Heat exchange calculations during physical activity |

2013-02-28 | het.test | White's Test for Heteroskedasticity |

2013-02-28 | MOJOV | Mojo Variants: Rare Variants analysis |

2013-02-28 | norm | Analysis of multivariate normal datasets with missing values |

2013-02-27 | HDMD | Statistical Analysis Tools for High Dimension Molecular Data (HDMD) |

2013-02-26 | estout | Estimates Output |

2013-02-26 | fso | Fuzzy Set Ordination |

2013-02-26 | orclus | ORCLUS subspace clustering |

2013-02-25 | cubature | Adaptive multivariate integration over hypercubes |

2013-02-25 | EBMAforecast | Ensemble BMA Forecasting |

2013-02-25 | intcox | Iterated Convex Minorant Algorithm for interval censored event data |

2013-02-25 | iWeigReg | Improved methods for causal inference and missing data problems |

2013-02-25 | ror | Robust Ordinal Regression MCDA library |

2013-02-25 | smcUtils | Utility functions for sequential Monte Carlo |

2013-02-25 | tsbugs | Create time series BUGS models |

2013-02-23 | conf.design | Construction of factorial designs |

2013-02-23 | fit.models | fit.models |

2013-02-22 | cheb | Discrete Linear Chebyshev Approximation |

2013-02-22 | epade | Easy Plots |

2013-02-22 | MEET | MEET: Motif Elements Estimation Toolkit |

2013-02-22 | nonparaeff | Nonparametric Methods for Measuring Efficiency and Productivity |

2013-02-22 | triangle | Provides the standard distribution functions for the triangle distribution |

2013-02-21 | bspec | Bayesian spectral inference |

2013-02-21 | Digiroo2 | An application programming interface for generating null models of social contacts based on individuals' space use |

2013-02-21 | DMR | Delete or Merge Regressors for linear model selection |

2013-02-21 | hash | Full feature implementation of hash/associated arrays/dictionaries |

2013-02-21 | RSAP | SAP Netweaver RFC connector for R |

2013-02-20 | PKI | Public Key Infrastucture for R based on the X.509 standard |

2013-02-19 | designGG | Computational tool for designing genetical genomics experiments |

2013-02-17 | audiolyzR | audiolyzR: Give your data a listen |

2013-02-17 | catenary | Fits a catenary to given points |

2013-02-17 | GetR | GetR: Calculate Guttman error trees in R |

2013-02-16 | HIest | Hybrid index estimation |

2013-02-16 | multinomRob | Robust Estimation of Overdispersed Multinomial Regression Models |

2013-02-15 | Iboot | Iboot: iterated bootstrap tests and confidence sets |

2013-02-15 | smdc | Document Similarity |

2013-02-14 | poibin | The Poisson Binomial Distribution |

2013-02-14 | survC1 | C-statistics for risk prediction models with censored survival data |

2013-02-11 | ash | David Scott's ASH routines |

2013-02-11 | gensemble | generalized ensemble methods |

2013-02-11 | mmeln | MMELN : Estimation of multinormal mixture distribution |

2013-02-09 | bayess | Bayesian Essentials with R |

2013-02-09 | Compounding | Computing Continuous Distributions |

2013-02-09 | modiscloud | R tools for processing Level 2 Cloud Mask products from MODIS |

2013-02-08 | PVR | Computes phylogenetic eigenvectors regression (PVR) and phylogenetic signal-representation curve (PSR) (with null and Brownian expectations) |

2013-02-08 | ternvis | Visualisation, verification and calibration of ternary probabilistic forecasts |

2013-02-07 | beadarrayFilter | Bead filtering for Illumina bead arrays |

2013-02-07 | debug | MVB's debugger for R |

2013-02-07 | galts | Genetic algorithms and C-steps based LTS (Least Trimmed Squares) estimation |

2013-02-07 | NestedCohort | Survival Analysis for Cohorts with Missing Covariate Information |

2013-02-07 | nlsmsn | Fitting nonlinear models with scale mixture of skew-normal distributions |

2013-02-07 | orddom | Ordinal Dominance Statistics |

2013-02-07 | qrnn | Quantile regression neural network |

2013-02-06 | ExactPath | Exact solution paths for regularized LASSO regressions with L_1 penalty |

2013-02-06 | glmpath | L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model |

2013-02-06 | stoichcalc | R Functions for Solving Stoichiometric Equations |

2013-02-05 | exactLoglinTest | Monte Carlo Exact Tests for Log-linear models |

2013-02-05 | fractalrock | Generate fractal time series with non-normal returns distribution |

2013-02-05 | gaussquad | Collection of functions for Gaussian quadrature |

2013-02-05 | ghyp | A package on the generalized hyperbolic distribution and its special cases |

2013-02-05 | pacbpred | PAC-Bayesian Estimation and Prediction in Sparse Additive Models |

2013-02-04 | infoDecompuTE | Information Decomposition of Two-phase Experiments |

2013-02-04 | OOmisc | Ozgur-Ozlem Miscellaneous |

2013-02-04 | orthopolynom | Collection of functions for orthogonal and orthonormal polynomials |

2013-02-04 | timeit | Easy profiling of R functions |

2013-02-03 | futile.any | Futile library to provide some polymorphic operations |

2013-02-03 | pdist | Partitioned Distance Function |

2013-02-03 | TimeProjection | Time Projections |

2013-02-01 | nCDunnett | Noncentral Dunnett's test distribution |

2013-01-30 | mlearning | Machine learning algorithms with unified interface and confusion matrices |

2013-01-30 | randomGLM | Random General Linear Model Prediction |

2013-01-30 | rdryad | Dryad API interface |

2013-01-30 | YieldCurve | Modelling and estimation of the yield curve |

2013-01-29 | DivMelt | HRM Diversity Assay Analysis Tool |

2013-01-29 | EMT | Exact Multinomial Test: Goodness-of-Fit Test for Discrete Multivariate data |

2013-01-29 | SUE | Subsampling method |

2013-01-28 | deal | Learning Bayesian Networks with Mixed Variables |

2013-01-28 | RcmdrPlugin.plotByGroup | Rcmdr plots by group using lattice |

2013-01-28 | seqPERM | Generates a permutation matrix based upon a sequence |

2013-01-28 | svSweave | SciViews GUI API - Sweave functions |

2013-01-27 | bclust | Bayesian clustering using spike-and-slab hierarchical model, suitable for clustering high-dimensional data |

2013-01-27 | labeltodendro | Convert labels or tables to a dendrogram |

2013-01-26 | emme2 | Read and Write to an EMME/2 databank |

2013-01-26 | shapefiles | Read and Write ESRI Shapefiles |

2013-01-26 | UWHAM | Unbinned weighted histogram analysis method (UWHAM) |

2013-01-25 | FI | Provide functions for forest inventory calculations |

2013-01-25 | metatest | Fit and test metaregression models |

2013-01-25 | misc3d | Miscellaneous 3D Plots |

2013-01-25 | pln | Polytomous logit-normit (graded logistic) model estimation |

2013-01-25 | RcmdrPlugin.StatisticalURV | Statistical URV Rcmdr Plug-In |

2013-01-25 | RcmdrPlugin.TeachingDemos | Rcmdr Teaching Demos Plug-In |

2013-01-24 | dichromat | Color Schemes for Dichromats |

2013-01-24 | medSTC | A max-margin supervised Sparse Topical Coding Model |

2013-01-24 | RcmdrPlugin.SLC | SLC Rcmdr Plug-in |

2013-01-24 | SLC | Slope and level change |

2013-01-23 | RcmdrPlugin.KMggplot2 | An Rcmdr Plug-In for Kaplan-Meier Plots and Other Plots by Using the ggplot2 Package |

2013-01-23 | sirad | Functions for calculating daily solar radiation and evapotranspiration |

2013-01-21 | contfrac | Continued fractions |

2013-01-21 | gemtc.jar | GeMTC Java binary |

2013-01-21 | MM | The multiplicative multinomial distribution |

2013-01-21 | multipol | multivariate polynomials |

2013-01-21 | Oarray | Arrays with arbitrary offsets |

2013-01-21 | RcmdrPlugin.orloca | orloca Rcmdr Plug-in |

2013-01-21 | semPLS | Structural Equation Modeling Using Partial Least Squares |

2013-01-21 | stellaR | stellar evolution tracks and isochrones |

2013-01-21 | TeachingDemos | Demonstrations for teaching and learning |

2013-01-20 | pequod | Moderated regression package |

2013-01-19 | adaptsmoFMRI | Adaptive Smoothing of FMRI Data |

2013-01-19 | currentSurvival | Estimation of CCI and CLFS Functions |

2013-01-19 | RcppXts | Interface the xts API via Rcpp |

2013-01-18 | BCBCSF | Bias-corrected Bayesian Classification with Selected Features |

2013-01-18 | blockrand | Randomization for block random clinical trials |

2013-01-18 | CVThresh | Level-Dependent Cross-Validation Thresholding |

2013-01-18 | edcc | Economic Design of Control Charts |

2013-01-18 | obsSens | Sensitivity analysis for Observational studies |

2013-01-18 | partitionMap | Partition Maps |

2013-01-17 | GWG | Calculation of probabilities for inadequate and excessive gestational weight gain |

2013-01-16 | Bhat | General likelihood exploration |

2013-01-16 | RcppExamples | Examples using Rcpp to interface R and C++ |

2013-01-16 | rms.gof | Root-mean-square goodness-of-fit test for simple null hypothesis |

2013-01-16 | setwidth | Set the value of options("width") on terminal emulators |

2013-01-16 | spacodiR | Spatial and Phylogenetic Analysis of Community Diversity |

2013-01-15 | SMPracticals | Practicals for use with Davison (2003) Statistical Models |

2013-01-14 | ESG | ESG - A package for asset projection |

2013-01-14 | samplingbook | Survey Sampling Procedures |

2013-01-14 | subtype | Cluster analysis to find molecular subtypes and their assessment |

2013-01-14 | xoi | Tools for analyzing crossover interference |

2013-01-13 | survivalROC | Time-dependent ROC curve estimation from censored survival data |

2013-01-12 | pass | Prediction and Stability Selection of Tuning Parameters |

2013-01-11 | gtx | Genetics ToolboX |

2013-01-11 | orloca.es | Spanish version of orloca package |

2013-01-09 | BioPhysConnectoR | BioPhysConnectoR |

2013-01-09 | PROTOLIDAR | PRocess TOol LIdar DAta in R |

2013-01-09 | RcmdrPlugin.mosaic | Adds menu items to produce mosaic plots and assoc plots to Rcmdr |

2013-01-08 | hier.part | Hierarchical Partitioning |

2013-01-08 | RcmdrPlugin.seeg | Rcmdr Plugin for seeg |

2013-01-07 | displayHTS | displayHTS |

2013-01-07 | stacomirtools | stacomi ODBC connection class |

2013-01-05 | ETLUtils | Utility functions to execute standard ETL operations (using package ff) on large data |

2013-01-05 | GWASExactHW | Exact Hardy-Weinburg testing for Genome Wide Association Studies |

2013-01-05 | Stat2Data | Datasets for Stat2 |

2013-01-04 | proteomicdesign | Optimization of a multi-stage proteomic study |

2013-01-04 | seeg | Statistics for Environmental Sciences, Engineering, and Geography |

2013-01-04 | sparcl | Perform sparse hierarchical clustering and sparse k-means clustering |

2013-01-03 | ldlasso | LD LASSO Regression for SNP Association Study |

2013-01-03 | partialOR | Partial Odds Ratio |

2013-01-02 | bootES | Bootstrap Effect Sizes |

2012-12-31 | RcmdrPlugin.SM | Rcmdr Sport Management Plug-In |

2012-12-30 | opefimor | Option Pricing and Estimation of Financial Models in R |

2012-12-30 | RcppClassicExamples | Examples using RcppClassic to interface R and C++ |

2012-12-30 | SPSL | Site Percolation on Square Lattice (SPSL) |

2012-12-29 | psytabs | Produce well-formatted tables for psychological research |

2012-12-28 | trapezoid | The Trapezoidal Distribution |

2012-12-27 | fgui | Function GUI |

2012-12-27 | randomizeBE | Function to create a random list for crossover studies |

2012-12-25 | truncgof | GoF tests allowing for left truncated data |

2012-12-24 | MedOr | Median Ordering Statistical R package |

2012-12-24 | MOCCA | Multi-objective optimization for collecting cluster alternatives |

2012-12-23 | RXKCD | Get XKCD comic from R |

2012-12-23 | svmpath | svmpath: the SVM Path algorithm |

2012-12-22 | DiversitySampler | Functions for re-sampling a community matrix to compute diversity indices at different sampling levels |

2012-12-22 | dyn | Time Series Regression |

2012-12-22 | MetaQC | MetaQC: Objective Quality Control and Inclusion/Exclusion Criteria for Genomic Meta-Analysis |

2012-12-22 | proto | Prototype object-based programming |

2012-12-21 | BurStMisc | Burns Statistics miscellaneous |

2012-12-21 | imputeMDR | The Multifactor Dimensionality Reduction (MDR) Analysis for Incomplete Data |

2012-12-21 | Lock5Data | Datasets for "Statistics: UnLocking the Power of Data" |

2012-12-21 | mvinfluence | Influence Measures and Diagnostic Plots for Multivariate Linear Models |

2012-12-21 | mvnmle | ML estimation for multivariate normal data with missing values |

2012-12-21 | NSA | Post-normalization of total copy numbers |

2012-12-21 | ORMDR | ORMDR |

2012-12-21 | ReCiPa | Redundancy Control in Pathways databases |

2012-12-21 | sperich | Auxiliary functions to estimate centers of biodiversity |

2012-12-20 | hbmem | Hierarchical Bayesian Analysis of Recognition Memory |

2012-12-19 | Kpart | Spline Fitting |

2012-12-19 | nose | nose Package for R |

2012-12-17 | dblcens | Compute the NPMLE of distribution from doubly censored data |

2012-12-17 | MBESS | MBESS |

2012-12-17 | MFDA | Model Based Functional Data Analysis |

2012-12-16 | WordPools | Classical word pools used in studies of learning and memory |

2012-12-15 | ConjointChecks | A package to check the cancellation axioms of conjoint measurement |

2012-12-15 | cosmoFns | Functions for cosmological distances, times, luminosities, etc |

2012-12-15 | FastRWeb | Fast Interactive Framework for Web Scripting Using R |

2012-12-15 | LeLogicielR | Functions and datasets to accompany the book "Le logiciel R: Maitriser le langage, Effectuer des analyses statistiques" (french) |

2012-12-14 | ltsa | Linear time series analysis |

2012-12-14 | MuFiCokriging | Multi-Fidelity Cokriging models |

2012-12-13 | snowFT | Fault Tolerant Simple Network of Workstations |

2012-12-12 | nutshell | Data for "R in a Nutshell" |

2012-12-12 | nutshell.audioscrobbler | Audioscrobbler data for "R in a Nutshell" |

2012-12-12 | nutshell.bbdb | Baseball Database for "R in a Nutshell" |

2012-12-12 | OptInterim | Optimal Two and Three Stage Designs for Single-Arm and Two-Arm Randomized Controlled Trials with a Long-Term Binary Endpoint |

2012-12-11 | IndependenceTests | Nonparametric tests of independence between random vectors |

2012-12-10 | ftnonpar | Features and Strings for Nonparametric Regression |

2012-12-10 | ifs | Iterated Function Systems |

2012-12-10 | SampleSizeMeans | Sample size calculations for normal means |

2012-12-08 | RDIDQ | It perform Quality check on data |

2012-12-08 | rpartScore | Classification trees for ordinal responses |

2012-12-07 | MultinomialCI | Simultaneous confidence intervals for multinomial proportions according to the method by Sison and Glaz |

2012-12-06 | stringr | Make it easier to work with strings |

2012-12-05 | gtable | Arrange grobs in tables |

2012-12-05 | simba | A Collection of functions for similarity analysis of vegetation data |

2012-12-04 | glmc | Fitting Generalized Linear Models Subject to Constraints |

2012-12-04 | soilwater | soilwater: Implements parametric formulas for soil water retention or conductivity curve |

2012-12-04 | source.gist | Read R code from a GitHub Gist |

2012-12-03 | KMsurv | Data sets from Klein and Moeschberger (1997), Survival Analysis |

2012-12-03 | muma | Metabolomics Univariate and Multivariate Analysis |

2012-12-02 | brainwaver | Basic wavelet analysis of multivariate time series with a visualisation and parametrisation using graph theory |

2012-12-02 | emdist | Earth Mover's Distance |

2012-12-02 | fracdiff | Fractionally differenced ARIMA aka ARFIMA(p,d,q) models |

2012-12-01 | ffmanova | Fifty-fifty MANOVA |

2012-12-01 | sybilDynFBA | Dynamic FBA : dynamic flux balance analysis |

2012-11-30 | gcookbook | Data for "R Graphics Cookbook" |

2012-11-30 | operator.tools | Utilities for working with R's operators |

2012-11-28 | plmm | Partially Linear Mixed Effects Model |

2012-11-27 | bootRes | Bootstrapped Response and Correlation Functions |

2012-11-27 | JASPAR | R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices |

2012-11-27 | TFX | R API to TrueFX(tm) |

2012-11-26 | distfree.cr | Distribution-free confidence region (distfree.cr) |

2012-11-26 | maptree | Mapping, pruning, and graphing tree models |

2012-11-26 | rts | Raster time series analysis |

2012-11-25 | gRc | Inference in Graphical Gaussian Models with Edge and Vertex Symmetries |

2012-11-24 | pairedCI | Confidence intervals for the ratio of locations and for the ratio of scales of two paired samples |

2012-11-24 | stepwise | Stepwise detection of recombination breakpoints |

2012-11-24 | W2CWM2C | The W2CWM2C package is a set of functions to produce new graphical tools for wavelet correlation (bivariate and multivariate cases) using some routines from the waveslim and wavemulcor packages |

2012-11-21 | rich | Computes and compares species richnesses |

2012-11-20 | ChoiceModelR | Choice Modeling in R |

2012-11-20 | LTPDvar | LTPD and AOQL plans for acceptance sampling inspection by variables |

2012-11-20 | sciplot | Scientific Graphing Functions for Factorial Designs |

2012-11-20 | stppResid | Perform residual analysis on space-time point process models |

2012-11-20 | tnet | tnet: Software for Analysis of Weighted, Two-mode, and Longitudinal networks |

2012-11-18 | systemfit | Estimating Systems of Simultaneous Equations |

2012-11-17 | BAEssd | Bayesian Average Error approach to Sample Size Determination |

2012-11-17 | HWEintrinsic | Objective Bayesian Testing for the Hardy-Weinberg Equilibrium Problem |

2012-11-17 | mederrRank | Bayesian Methods for Identifying the Most Harmful Medication Errors |

2012-11-15 | epibasix | Elementary Epidemiological Functions for Epidemiology and Biostatistics |

2012-11-15 | PAWL | Implementation of the PAWL algorithm |

2012-11-14 | bindata | Generation of Artificial Binary Data |

2012-11-14 | linLIR | linear Likelihood-based Imprecise Regression |

2012-11-13 | ade4TkGUI | ade4 Tcl/Tk Graphical User Interface |

2012-11-13 | adimpro | Adaptive Smoothing of Digital Images |

2012-11-13 | mixcat | Mixed effects cumulative link and logistic regression models |

2012-11-13 | plsdepot | Partial Least Squares (PLS) Data Analysis Methods |

2012-11-13 | TSA | Time Series Analysis |

2012-11-11 | egonet | Tool for ego-centric measures in Social Network Analysis |

2012-11-11 | lcd | Learn Chain graphs via Decomposition |

2012-11-11 | nlt | A nondecimated lifting transform for signal denoising |

2012-11-09 | apTreeshape | Analyses of Phylogenetic Treeshape |

2012-11-09 | Rhh | Calculating multilocus heterozygosity and heterozygosity-heterozygosity correlation |

2012-11-09 | STAR | Spike Train Analysis with R |

2012-11-08 | mtsdi | Multivariate time series data imputation |

2012-11-07 | Davies | The Davies quantile function |

2012-11-07 | fExoticOptions | Exotic Option Valuation |

2012-11-07 | ResistorArray | electrical properties of resistor networks |

2012-11-07 | waved | Wavelet Deconvolution |

2012-11-06 | adlift | An adaptive lifting scheme algorithm |

2012-11-05 | CHsharp | Choi and Hall Clustering in 3d |

2012-11-05 | homtest | Homogeneity tests for Regional Frequency Analysis |

2012-11-05 | scagnostics | Compute scagnostics - scatterplot diagnostics |

2012-11-03 | mlica2 | Independent Component Analysis using Maximum Likelihood |

2012-11-03 | tableplot | Represents tables as semi-graphic displays |

2012-11-02 | frmqa | The Generalized Hyperbolic Distribution, Related Distributions and Their Applications in Finance |

2012-11-02 | IDPmisc | Utilities of Institute of Data Analyses and Process Design (www.idp.zhaw.ch) |

2012-11-02 | mratios | Inferences for ratios of coefficients in the general linear model |

2012-11-02 | smirnov | Provides two taxonomic coefficients from E. S. Smirnov "Taxonomic analysis" (1969) book |

2012-11-01 | argosfilter | Argos locations filter |

2012-11-01 | fpow | Computing the noncentrality parameter of the noncentral F distribution |

2012-11-01 | SwissAir | Air Quality Data of Switzerland for one year in 30 min Resolution |

2012-11-01 | xgobi | Interface to the XGobi and XGvis programs for graphical data analysis |

2012-10-31 | dynCorr | Dynamic Correlation Package |

2012-10-31 | NORMT3 | Evaluates complex erf, erfc, Faddeeva, and density of sum of Gaussian and Student's t |

2012-10-31 | waveband | Computes credible intervals for Bayesian wavelet shrinkage |

2012-10-30 | Actigraphy | Actigraphy Data Analysis |

2012-10-30 | cat | Analysis of categorical-variable datasets with missing values |

2012-10-30 | cudaBayesregData | Data sets for the examples used in the package "cudaBayesreg" |

2012-10-30 | degenes | Detection of differentially expressed genes |

2012-10-30 | fma | Data sets from "Forecasting: methods and applications" by Makridakis, Wheelwright & Hyndman (1998) |

2012-10-30 | gnumeric | Read data from files readable by gnumeric |

2012-10-30 | ScreenClean | Screen and clean variable selection procedures |

2012-10-30 | speff2trial | Semiparametric efficient estimation for a two-sample treatment effect |

2012-10-30 | waterfall | Waterfall Charts in R |

2012-10-29 | ACCLMA | ACC & LMA Graph Plotting |

2012-10-29 | AdaptFit | Adaptive Semiparametic Regression |

2012-10-29 | Agreement | Statistical Tools for Measuring Agreement |

2012-10-29 | allan | Automated Large Linear Analysis Node |

2012-10-29 | allanvar | Allan Variance Analysis |

2012-10-29 | AllPossibleSpellings | Computes all of a word's possible spellings |

2012-10-29 | anapuce | Tools for microarray data analysis |

2012-10-29 | andrews | Andrews curves |

2012-10-29 | anesrake | ANES Raking Implementation |

2012-10-29 | APSIMBatch | Analysis the output of Apsim software |

2012-10-29 | audit | Bounds for Accounting Populations |

2012-10-29 | BaM | Functions and datasets for books by Jeff Gill |

2012-10-29 | batade | HTML reports and so on |

2012-10-29 | bayespref | Hierarchical Bayesian analysis of ecological count data |

2012-10-29 | BayHaz | R Functions for Bayesian Hazard Rate Estimation |

2012-10-29 | betafam | Detecting rare variants for quantitative traits using nuclear families |

2012-10-29 | betaper | Functions to incorporate taxonomic uncertainty on multivariate analyses of ecological data |

2012-10-29 | bethel | Bethel's algorithm |

2012-10-29 | BGSIMD | Block Gibbs Sampler with Incomplete Multinomial Distribution |

2012-10-29 | bimetallic | Power for SNP analyses using silver standard cases |

2012-10-29 | Biodem | Biodemography functions |

2012-10-29 | biopara | Self-contained parallel system for R |

2012-10-29 | bivarRIpower | Sample size calculations for bivariate longitudinal data |

2012-10-29 | biwt | Functions to compute the biweight mean vector and covariance & correlation matrices |

2012-10-29 | bootspecdens | Testing equality of spectral densities |

2012-10-29 | CARramps | Reparameterized and marginalized posterior sampling for conditional autoregressive models |

2012-10-29 | CCA | Canonical correlation analysis |

2012-10-29 | CCP | Significance Tests for Canonical Correlation Analysis (CCA) |

2012-10-29 | CDFt | Statistical downscaling through CDF-transform |

2012-10-29 | CircStats | Circular Statistics, from "Topics in circular Statistics" (2001) |

2012-10-29 | CMC | Cronbach-Mesbah Curve |

2012-10-29 | colorRamps | Builds color tables |

2012-10-29 | combinat | combinatorics utilities |

2012-10-29 | CombMSC | Combined Model Selection Criteria |

2012-10-29 | CompareTests | Estimate diagnostic accuracy (sensitivity, specificity, etc) and agreement statistics when one test is conducted on only a subsample of specimens |

2012-10-29 | compoisson | Conway-Maxwell-Poisson Distribution |

2012-10-29 | concor | Concordance |

2012-10-29 | COP | Variables selection for index models via correlation pursuit |

2012-10-29 | cotrend | Consistant Cotrend Rank Selection |

2012-10-29 | cumSeg | Change point detection in genomic sequences |

2012-10-29 | dbConnect | Provides a graphical user interface to connect with databases that use MySQL |

2012-10-29 | dinamic | DiNAMIC A Method To Analyze Recurrent DNA Copy Number Aberrations in Tumors |

2012-10-29 | discretization | Data preprocessing, discretization for classification |

2012-10-29 | divagis | Provides tools for quality checks of georeferenced plant species accessions |

2012-10-29 | dpa | Dynamic Path Approach |

2012-10-29 | drm | Regression and association models for repeated categorical data |

2012-10-29 | DTDA | Doubly truncated data analysis |

2012-10-29 | EbayesThresh | Empirical Bayes Thresholding and Related Methods |

2012-10-29 | eigeninv | Generates (dense) matrices that have a given set of eigenvalues |

2012-10-29 | elec | Collection of functions for statistical election audits |

2012-10-29 | EMJumpDiffusion | EM-Algorithm for Jump Diffusion processes |

2012-10-29 | EngrExpt | Data sets from "Introductory Statistics for Engineering Experimentation" |

2012-10-29 | evora | Epigenetic Variable Outliers for Risk prediction Analysis |

2012-10-29 | eyetracking | Eyetracking Helper Functions |

2012-10-29 | FactMixtAnalysis | Factor Mixture Analysis with covariates |

2012-10-29 | fgac | Generalized Archimedean Copula |

2012-10-29 | fit4NM | NONMEM platform |

2012-10-29 | Flury | Data Sets from Flury, 1997 |

2012-10-29 | forensic | Statistical Methods in Forensic Genetics |

2012-10-29 | forward | Forward search |

2012-10-29 | FourScores | FourScores - A game for two players |

2012-10-29 | freqMAP | Frequency Moving Average Plots (MAP) of Multinomial Data by a Continuous Covariate |

2012-10-29 | frt | Full Randomization Test |

2012-10-29 | FTICRMS | Programs for Analyzing Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry Data |

2012-10-29 | GA4Stratification | A genetic algorithm approach to determine stratum boundaries and sample sizes of each stratum in stratified sampling |

2012-10-29 | GAD | GAD: Analysis of variance from general principles |

2012-10-29 | GANPAdata | The GANPA Datasets Package |

2012-10-29 | gbs | Package for Generalized Birnbaum-Saunders Distributions |

2012-10-29 | GeneF | Package for Generalized F-statistics |

2012-10-29 | GeneReg | Construct time delay gene regulatory network |

2012-10-29 | geomapdata | Data for topographic and Geologic Mapping |

2012-10-29 | gibbs.met | Naive Gibbs Sampling with Metropolis Steps |

2012-10-29 | globalboosttest | Testing the additional predictive value of high-dimensional data |

2012-10-29 | gPdtest | Bootstrap goodness-of-fit test for the generalized Pareto distribution |

2012-10-29 | gwerAM | Controlling the genome-wide type I error rate in association mapping experiments |

2012-10-29 | HadoopStreaming | Utilities for using R scripts in Hadoop streaming |

2012-10-29 | HAPim | HapIM |

2012-10-29 | haplo.ccs | Estimate Haplotype Relative Risks in Case-Control Data |

2012-10-29 | heatmap.plus | Heatmap with more sensible behavior |

2012-10-29 | holdem | Texas Holdem simulator |

2012-10-29 | homeR | Functions useful for building physics |

2012-10-29 | hotspots | Hot spots |

2012-10-29 | HPbayes | Heligman Pollard mortality model parameter estimation using Bayesian Melding with Incremental Mixture Importance Sampling |

2012-10-29 | igraphtosonia | Convert iGraph graps to SoNIA .son files |

2012-10-29 | Imap | Interactive Mapping |

2012-10-29 | IMIS | Increamental Mixture Importance Sampling |

2012-10-29 | ImpactIV | Identifying Causal Effect for Multi-Component Intervention Using Instrumental Variable Method |

2012-10-29 | InfDim | Infine-dimensional model (IDM) to analyse phenotypic variation in growth trajectories |

2012-10-29 | insideRODE | insideRODE includes buildin functions with deSolve solver and C/FORTRAN interfaces to nlme, together with compiled codes |

2012-10-29 | Interpol | Interpolation of amino acid sequences |

2012-10-29 | intRegGOF | Integrated Regression Goodness of Fit |

2012-10-29 | introgress | methods for analyzing introgression between divergent lineages |

2012-10-29 | ISDA.R | interval symbolic data analysis for R |

2012-10-29 | isopat | Calculation of isotopic pattern for a given molecular formula |

2012-10-29 | klin | Linear equations with Kronecker structure |

2012-10-29 | kzft | Kolmogorov-Zurbenko Fourier Transform and Applications |

2012-10-29 | lmec | Linear Mixed-Effects Models with Censored Responses |

2012-10-29 | lqa | Penalized Likelihood Inference for GLMs |

2012-10-29 | lss | the accelerated failure time model to right censored data based on least-squares principle |

2012-10-29 | LTR | Perform LTR analysis on microarray data |

2012-10-29 | MAc | Meta-Analysis with Correlations |

2012-10-29 | MAclinical | Class prediction based on microarray data and clinical parameters |

2012-10-29 | mAr | Multivariate AutoRegressive analysis |

2012-10-29 | MBCluster.Seq | Model-Based Clustering for RNA-seq Data |

2012-10-29 | MChtest | Monte Carlo hypothesis tests with Sequential Stopping |

2012-10-29 | Miney | Implementation of the Well-Known Game to Clear Bombs from a Given Field (Matrix) |

2012-10-29 | minxent | Entropy Optimization Distributions |

2012-10-29 | mixdist | Finite Mixture Distribution Models |

2012-10-29 | MKLE | Maximum kernel likelihood estimation |

2012-10-29 | mpa | CoWords Method |

2012-10-29 | mvsf | Shapiro-Francia Multivariate Normality Test |

2012-10-29 | NetCluster | Clustering for networks |

2012-10-29 | NetData | Network Data for McFarland's SNA R labs |

2012-10-29 | NightDay | Night and Day Boundary Plot Funtion |

2012-10-29 | nlADG | Regression in the Normal Linear ADG Model |

2012-10-29 | NMFN | Non-negative Matrix Factorization |

2012-10-29 | normwhn.test | Normality and White Noise Testing |

2012-10-29 | NPMPM | tertiary probabilistic model in predictive microbiology for use in food manufacture |

2012-10-29 | nppbib | Nonparametric Partially-Balanced Incomplete Block Design Analysis |

2012-10-29 | OligoSpecificitySystem | Oligo Specificity System |

2012-10-29 | omd | filter the molecular descriptors for QSAR |

2012-10-29 | oncomodel | Maximum likelihood tree models for oncogenesis |

2012-10-29 | OPE | Outer-product emulator |

2012-10-29 | ORDER2PARENT | Estimate parent distributions with data of several order statistics |

2012-10-29 | ORIClust | Order-restricted Information Criterion-based Clustering Algorithm |

2012-10-29 | paleoMAS | Paleoecological Analysis |

2012-10-29 | pamm | Power analysis for random effects in mixed models |

2012-10-29 | parfossil | Parallelized functions for palaeoecological and palaeogeographical analysis |

2012-10-29 | parviol | Parviol |

2012-10-29 | PASWR | PROBABILITY and STATISTICS WITH R |

2012-10-29 | Peaks | Peaks |

2012-10-29 | penalizedSVM | Feature Selection SVM using penalty functions |

2012-10-29 | permtest | Permutation test to compare variability within and distance between two groups |

2012-10-29 | pesticides | Analysis of single serving and composite pesticide residue measurements |

2012-10-29 | pGLS | Generalized Least Square in comparative Phylogenetics |

2012-10-29 | phylotools | Phylogenetic tools for Eco-phylogenetics |

2012-10-29 | poistweedie | Poisson-Tweedie exponential family models |

2012-10-29 | PopGenKit | Useful functions for (batch) file conversion and data resampling in microsatellite datasets |

2012-10-29 | ppcor | Partial and Semi-partial (Part) correlation |

2012-10-29 | pps | Functions for PPS sampling |

2012-10-29 | pragma | Provides a pragma / directive / keyword syntax for R |

2012-10-29 | PredictiveRegression | Prediction Intervals for Three Basic Statistical Models |

2012-10-29 | predmixcor | Classification rule based on Bayesian mixture models with feature selection bias corrected |

2012-10-29 | ProbForecastGOP | Probabilistic weather forecast using the GOP method |

2012-10-29 | qlspack | Quasi Least Square Package |

2012-10-29 | qPCR.CT | qPCR data analysis and plot package |

2012-10-29 | qtlDesign | Design of QTL experiments |

2012-10-29 | rdetools | Relevant Dimension Estimation (RDE) in Feature Spaces |

2012-10-29 | reams | Resampling-Based Adaptive Model Selection |

2012-10-29 | Records | Record Values and Record Times |

2012-10-29 | REQS | R/EQS Interface |

2012-10-29 | RHT | Regularized Hotelling's T-square Test for Pathway (Gene Set) Analysis |

2012-10-29 | ringscale | Ringscale |

2012-10-29 | rmeta | Meta-analysis |

2012-10-29 | ROCwoGS | Non-parametric estimation of ROC curves without Gold Standard Test |

2012-10-29 | RODM | R interface to Oracle Data Mining |

2012-10-29 | RPyGeo | ArcGIS Geoprocessing in R via Python |

2012-10-29 | Rsundials | Suite of Nonlinear Differential Algebraic Equations Solvers in R |

2012-10-29 | rSymPy | R interface to SymPy computer algebra system |

2012-10-29 | sbgcop | Semiparametric Bayesian Gaussian copula estimation and imputation |

2012-10-29 | sddpack | Semidiscrete Decomposition |

2012-10-29 | sdef | Synthesizing List of Differentially Expressed Features |

2012-10-29 | seqCBS | CN Profiling using Sequencing and CBS |

2012-10-29 | seqmon | Sequential Monitoring of Clinical Trials |

2012-10-29 | seqRFLP | Simulation and visualization of restriction enzyme cutting pattern from DNA sequences |

2012-10-29 | session | Functions for interacting with, saving and restoring R sessions |

2012-10-29 | SiZer | SiZer: Significant Zero Crossings |

2012-10-29 | skewt | The Skewed Student-t Distribution |

2012-10-29 | smco | A simple Monte Carlo optimizer using adaptive coordinate sampling |

2012-10-29 | SMIR | Companion to Statistical Modelling in R |

2012-10-29 | SMVar | Structural Model for variances |

2012-10-29 | SNPmaxsel | Maximally selected statistics for SNP data |

2012-10-29 | spi | Compute SPI index |

2012-10-29 | sporm | Semiparametric proportional odds rate model |

2012-10-29 | ssanv | Sample Size Adjusted for Nonadherence or Variability of input parameters |

2012-10-29 | Stem | Spatio-temporal models in R |

2012-10-29 | stinepack | Stineman, a consistently well behaved method of interpolation |

2012-10-29 | symbols | Symbol plots |

2012-10-29 | TANOVA | Time Course Analysis of Variance for Microarray |

2012-10-29 | TERAplusB | Test for A+B Traditional Escalation Rule |

2012-10-29 | tfer | Forensic Glass Transfer Probabilities |

2012-10-29 | titan | Titration analysis for mass spectrometry data |

2012-10-29 | trifield | Some basic facilities for ternary fields and plots |

2012-10-29 | trimcluster | Cluster analysis with trimming |

2012-10-29 | tslars | Least angle regression for time series analysis |

2012-10-29 | Tsphere | Transposable Sphering for Large-Scale Inference with Correlated Data |

2012-10-29 | unbalhaar | Function estimation via Unbalanced Haar wavelets |

2012-10-29 | UScensus2000cdp | US Census 2000 Designated Places Shapefiles and Additional Demographic Data |

2012-10-29 | UScensus2000tract | US Census 2000 Tract Level Shapefiles and Additional Demographic Data |

2012-10-29 | vegetarian | Jost Diversity Measures for Community Data |

2012-10-29 | VIF | VIF Regression: A Fast Regression Algorithm For Large Data |

2012-10-29 | violinmplot | Combination of violin plot with mean and standard deviation |

2012-10-29 | walkscoreAPI | Walk Score and Transit Score API |

2012-10-29 | WaveCD | Wavelet change point detection for array CGH data |

2012-10-29 | wavemulcor | Wavelet routine for multiple correlation |

2012-10-29 | wikibooks | Functions and datasets of the german WikiBook "GNU R" |

2012-10-29 | WilcoxCV | Wilcoxon-based variable selection in cross-validation |

2012-10-29 | wombsoft | Wombling Computation |

2012-10-29 | write.snns | Function for exporting data to SNNS pattern files |

2012-10-29 | wSVM | Weighted SVM with boosting algorithm for improving accuracy |

2012-10-29 | yacca | Yet Another Canonical Correlation Analysis Package |

2012-10-27 | nlmeODE | Non-linear mixed-effects modelling in nlme using differential equations |

2012-10-26 | joineR | Joint modelling of repeated measurements and time-to-event data |

2012-10-25 | locpol | Kernel local polynomial regression |

2012-10-24 | CARE1 | Statistical package for population size estimation in capture-recapture models |

2012-10-24 | dpglasso | Primal Graphical Lasso |

2012-10-23 | pheno | Auxiliary functions for phenological data analysis |

2012-10-23 | RGtk2Extras | Data frame editor and dialog making wrapper for RGtk2 |

2012-10-22 | detrendeR | Start the detrendeR Graphical User Interface (GUI) |

2012-10-22 | landsat | Radiometric and topographic correction of satellite imagery |

2012-10-20 | MBI | (M)ultiple-site (B)iodiversity (I)ndices Calculator |

2012-10-19 | TwoCop | Nonparametric test of equality between two copulas |

2012-10-18 | HiPLARM | High Performance Linear Algebra in R |

2012-10-17 | bmk | MCMC diagnostics package |

2012-10-17 | linprog | Linear Programming / Optimization |

2012-10-16 | PhaseType | Inference for Phase-type Distributions |

2012-10-15 | lineup | Lining up two sets of measurements |

2012-10-15 | modeest | Mode Estimation |

2012-10-15 | npde | Normalised prediction distribution errors for nonlinear mixed-effect models |

2012-10-15 | orcutt | Estimate procedure in case of first order autocorrelation |

2012-10-15 | Ridit | Ridit Analysis (An extension of the Kruskal-Wallis Test.) |

2012-10-14 | lda | Collapsed Gibbs sampling methods for topic models |

2012-10-14 | numDeriv | Accurate Numerical Derivatives |

2012-10-12 | ChemometricsWithRData | Data for package ChemometricsWithR |

2012-10-11 | powerpkg | Power analyses for the affected sib pair and the TDT design |

2012-10-10 | PoissonSeq | Significance analysis of sequencing data based on a Poisson log linear model |

2012-10-08 | expoRkit | Expokit in R |

2012-10-05 | r2stl | r2stl, R package for visualizing data using a 3D printer |

2012-10-05 | Rivivc | In vitro in vivo correlation linear level A |

2012-10-04 | fastSOM | Fast Calculation of Spillover Measures |

2012-10-04 | FRCC | Fast Regularized Canonical Correlation Analysis |

2012-10-04 | freeknotsplines | Free-Knot Splines |

2012-10-04 | rrBlupMethod6 | Re-parametrization of RR-BLUP to allow for a fixed residual variance |

2012-10-03 | rworldxtra | Country boundaries at high resolution |

2012-10-01 | biasbetareg | Bias correction of the parameter estimates of the beta regression model |

2012-10-01 | gbRd | Utilities for processing Rd objects and files |

2012-10-01 | loop | loop decomposition of weighted directed graphs for life cycle analysis, providing flexbile network plotting methods, and analyzing food chain properties in ecology |

2012-09-30 | epitools | Epidemiology Tools |

2012-09-29 | astroFns | Astronomy: time and position functions, misc. utilities |

2012-09-28 | reccsim | Simulation of Rare Events Case-Control Studies |

2012-09-27 | Brq | Bayesian analysis of quantile regression models |

2012-09-27 | monmlp | Monotone multi-layer perceptron neural network |

2012-09-27 | RWeather | R wrapper around the Yahoo! Weather, Google Weather and NOAA APIs |

2012-09-26 | ccChooser | Developing a core collections |

2012-09-26 | risksetROC | Riskset ROC curve estimation from censored survival data |

2012-09-26 | smcure | Fit Semiparametric Mixture Cure Models |

2012-09-26 | spatgraphs | Graphs for spatial point patterns |

2012-09-25 | emoa | Evolutionary Multiobjective Optimization Algorithms |

2012-09-22 | NonpModelCheck | Model Checking and Variable Selection in Nonparametric Regression |

2012-09-20 | binomialcftp | Generates binomial random numbers via the coupling from the past algorithm |

2012-09-20 | neuralnet | Training of neural networks |

2012-09-19 | epicalc | Epidemiological calculator |

2012-09-19 | namespace | Provide namespace managment functions not (yet) present in base R |

2012-09-19 | nparLD | Nonparametric Analysis of Longitudinal Data in Factorial Experiments |

2012-09-18 | MitISEM | Mixture of Student t Distributions using Importance Sampling and Expectation Maximization |

2012-09-17 | Giza | Constructing panels of population pyramid plots based on lattice |

2012-09-15 | abcdeFBA | ABCDE_FBA: A-Biologist-Can-Do-Everything of Flux Balance Analysis with this package |

2012-09-15 | matrixcalc | Collection of functions for matrix calculations |

2012-09-14 | ActuDistns | Functions for actuarial scientists |

2012-09-14 | cslogistic | Conditionally Specified Logistic Regression |

2012-09-14 | DPpackage | Bayesian nonparametric modeling in R |

2012-09-14 | WCQ | Detection of QTL effects in a small mapping population |

2012-09-13 | JavaGD | Java Graphics Device |

2012-09-13 | spcov | Sparse Estimation of a Covariance Matrix |

2012-09-12 | Sleuth2 | Data sets from Ramsey and Schafer's "Statistical Sleuth (2nd ed)" |

2012-09-11 | BayesNI | BayesNI: Bayesian Testing Procedure for Noninferiority with Binary Endpoints |

2012-09-11 | CePa | Centrality-based pathway enrichment |

2012-09-10 | hmeasure | The H-measure and other scalar classification performance metrics |

2012-09-10 | paran | Horn's Test of Principal Components/Factors |

2012-09-06 | FMStable | Finite Moment Stable Distributions |

2012-09-06 | NISTnls | Nonlinear least squares examples from NIST |

2012-09-06 | pi0 | Estimating the proportion of true null hypotheses for FDR |

2012-09-05 | hbsae | Hierarchical Bayesian Small Area Estimation |

2012-09-04 | ipdmeta | Tools for subgroup analyses with multiple trial data using aggregate statistics |

2012-09-04 | miniGUI | tktcl quick and simple function GUI |

2012-09-04 | mlPhaser | Multi-Locus Haplotype Phasing |

2012-09-04 | survAUC | Estimators of prediction accuracy for time-to-event data |

2012-09-03 | PIPS | Predicted Interval Plots |

2012-09-02 | pso | Particle Swarm Optimization |

2012-09-01 | openintro | OpenIntro data sets and supplemental functions |

2012-09-01 | sca | Simple Component Analysis |

2012-09-01 | twoStageGwasPower | Compute thresholds and power for two-stage gwas |

2012-08-31 | clusteval | Evaluation of Clustering Algorithms |

2012-08-31 | NetComp | Network Generation and Comparison |

2012-08-30 | evd | Functions for extreme value distributions |

2012-08-30 | fmt | Variance estimation of FMT method (Fully Moderated t-statistic) |

2012-08-30 | rbenchmark | Benchmarking routine for R |

2012-08-30 | Sejong | KoNLP static dictionaries and Sejong project resources |

2012-08-29 | MetabolAnalyze | Probabilistic latent variable models for metabolomic data |

2012-08-29 | tightClust | Tight Clustering |

2012-08-28 | logitnorm | Functions for the logitnormal distribution |

2012-08-28 | playwith | A GUI for interactive plots using GTK+ |

2012-08-24 | regtest | Regression testing |

2012-08-24 | rindex | Indexing for R |

2012-08-24 | SearchTrees | Spatial Search Trees |

2012-08-24 | seem | Simulation of Ecological and Environmental Models |

2012-08-23 | gaussDiff | Difference measures for multivariate Gaussian probability density functions |

2012-08-23 | muStat | Prentice Rank Sum Test and McNemar Test |

2012-08-23 | Simpsons | Detecting Simpson's Paradox |

2012-08-23 | smoothmest | Smoothed M-estimators for 1-dimensional location |

2012-08-22 | LifeTables | A package to implement HMD model life table system |

2012-08-22 | Rlab | Functions and Datasets Required for ST370 class |

2012-08-22 | sitools | Format a number to a string with SI prefix |

2012-08-22 | VPdtw | Variable Penalty Dynamic Time Warping |

2012-08-21 | BigTSP | Top Scoring Pair based methods for classification |

2012-08-21 | flashClust | Implementation of optimal hierarchical clustering |

2012-08-21 | labstatR | Libreria del Laboratorio di Statistica con R |

2012-08-20 | quantchem | Quantitative chemical analysis: calibration and evaluation of results |

2012-08-19 | cudia | CUDIA Cross-level Imputation |

2012-08-19 | cxxfunplus | extend cxxfunction by saving the dynamic shared objects |

2012-08-19 | ddst | Data driven smooth test |

2012-08-19 | MATTOOLS | Modern Calibration Functions for the Modern Analog Technique (MAT) |

2012-08-19 | MSG | Data and functions for the book Modern Statistical Graphics |

2012-08-19 | RPCLR | RPCLR (Random-Penalized Conditional Logistic Regression) |

2012-08-17 | arrayhelpers | Convenience functions for arrays |

2012-08-17 | DAKS | Data Analysis and Knowledge Spaces |

2012-08-17 | fechner | Fechnerian Scaling of Discrete Object Sets |

2012-08-17 | PresenceAbsence | Presence-Absence Model Evaluation |

2012-08-17 | SAScii | Import ASCII files directly into R using only a SAS input script |

2012-08-16 | capwire | Estimates population size from non-invasive sampling |

2012-08-16 | lava.tobit | LVM with censored and binary outcomes |

2012-08-14 | aspace | A collection of functions for estimating centrographic statistics and computational geometries for spatial point patterns |

2012-08-14 | binGroup | Evaluation and experimental design for binomial group testing |

2012-08-14 | rHpcc | Interface between HPCC and R |

2012-08-13 | depth | Depth functions tools for multivariate analysis |

2012-08-13 | kerdiest | Nonparametric kernel estimation of the distribution function. Bandwidth selection and estimation of related functions |

2012-08-13 | SQN | subset quantile normalization |

2012-08-13 | TauP.R | Earthquake Traveltime Calculations for 1-D Earth Models |

2012-08-11 | boostSeq | Optimized GWAS cohort subset selection for resequencing studies |

2012-08-11 | PLIS | Multiplicity control using Pooled LIS statistic |

2012-08-11 | TSEN | Two-dimensional peak sentinel tool for GC x GC-HRTOFMS |

2012-08-10 | asympTest | Asymptotic statistic |

2012-08-10 | IC2 | Inequality and Concentration Indices and Curves |

2012-08-10 | MetaDE | MetaDE: Microarray meta-analysis for differentially expressed gene detection |

2012-08-10 | obliqueRF | Oblique Random Forests from Recursive Linear Model Splits |

2012-08-10 | SAFD | Statistical Analysis of Fuzzy Data |

2012-08-09 | bvenn | A Simple alternative to proportional Venn diagrams |

2012-08-09 | BVS | Bayesian Variant Selection: Bayesian Model Uncertainty Techniques for Genetic Association Studies |

2012-08-09 | dlmap | Detection Localization Mapping for QTL |

2012-08-09 | FormalSeries | Elementary arithemtic in formal series rings |

2012-08-09 | gridExtra | functions in Grid graphics |

2012-08-09 | modelfree | Model-free estimation of a psychometric function |

2012-08-09 | p2distance | Welfare's Synthetic Indicator |

2012-08-08 | AquaEnv | AquaEnv - an integrated development toolbox for aquatic chemical model generation |

2012-08-08 | fugeR | FUzzy GEnetic, a machine learning algorithm to construct prediction model based on fuzzy logic |

2012-08-07 | semGOF | Goodness-of-fit indexes for structural equation models |

2012-08-06 | mcmcse | Monte Carlo Standard Errors for MCMC |

2012-08-06 | notifyR | Send push notifications to your smartphone via pushover.net (ACCOUNT REQUIRED!) |

2012-08-05 | deamer | Deconvolution density estimation with adaptive methods for a variable prone to measurement error |

2012-08-05 | proj4 | A simple interface to the PROJ.4 cartographic projections library |

2012-08-04 | R2PPT | Simple R Interface to Microsoft PowerPoint using rcom or RDCOMClient |

2012-08-03 | crblocks | Categorical Randomized Block Data Analysis |

2012-08-02 | coexist | Species coexistence modeling and analysis |

2012-08-02 | crn | Downloads and Builds datasets for Climate Reference Network |

2012-08-01 | Runiversal | Runiversal - Package for converting R objects to Java variables and XML |

2012-07-31 | rtape | Manage and manipulate large collections of R objects stored as tape-like files |

2012-07-30 | EstCRM | Calibrating Parameters for the Samejima's Continuous IRT Model |

2012-07-30 | HyPhy | Macroevolutionary phylogentic analysis of species trees and gene trees |

2012-07-30 | rJython | R interface to Python via Jython |

2012-07-28 | BaylorEdPsych | R Package for Baylor University Educational Psychology Quantitative Courses |

2012-07-28 | gogarch | Generalized Orthogonal GARCH (GO-GARCH) models |

2012-07-26 | evir | Extreme Values in R |

2012-07-26 | iRegression | Regression methods for interval-valued variables |

2012-07-26 | mbmdr | Model Based Multifactor Dimensionality Reduction |

2012-07-26 | PlayerRatings | Dynamic Updating Methods For Player Ratings Estimation |

2012-07-25 | dpmixsim | Dirichlet Process Mixture model simulation for clustering and image segmentation |

2012-07-25 | txtplot | Text based plots |

2012-07-23 | c3net | Infering large-scale gene networks with C3NET |

2012-07-23 | cggd | Continuous Generalized Gradient Descent |

2012-07-23 | datamerge | Merging of overlapping and inconsistent data |

2012-07-23 | drawExpression | Visualising R syntax through graphics |

2012-07-23 | FindAllRoots | Find all root(s) of the equation and Find root(s) of the equation by dichotomy |

2012-07-23 | FunCluster | Functional Profiling of Microarray Expression Data |

2012-07-23 | geneListPie | Profiling a gene list into GOslim or KEGG function pie |

2012-07-23 | GExMap | A visual, intuitive, easy to use software giving access to a new type of information buried into your microarray data |

2012-07-23 | mcclust | Process an MCMC Sample of Clusterings |

2012-07-23 | ODB | Open Document Databases (.odb) management |

2012-07-23 | parmigene | Parallel Mutual Information estimation for Gene Network reconstruction |

2012-07-23 | schoolmath | Functions and datasets for math used in school |

2012-07-23 | spa | Implements The Sequential Predictions Algorithm |

2012-07-22 | GhcnDaily | Downloads and processes GHCN daily |

2012-07-20 | FRACTION | Numeric number into fraction |

2012-07-20 | obliclus | Cluster-based factor rotation |

2012-07-19 | xtermStyle | Basic text formatting using xterm escape sequences |

2012-07-18 | cncaGUI | Canonical Non-symmetrical Correspondence Analysis in R |

2012-07-18 | elmNN | Implementation of ELM (Extreme Learning Machine ) algorithm for SLFN ( Single Hidden Layer Feedforward Neural Networks ) |

2012-07-17 | bspmma | bspmma: Bayesian Semiparametric Models for Meta-Analysis |

2012-07-16 | irr | Various Coefficients of Interrater Reliability and Agreement |

2012-07-13 | knnGarden | Multi-distance based k-Nearest Neighbors |

2012-07-13 | lhs | Latin Hypercube Samples |

2012-07-12 | UScensus2010 | US Census 2010 Suite of R Packages |

2012-07-11 | DeducerSurvival | Add Survival Dialogue to Deducer |

2012-07-11 | HW.pval | Testing Hardy-Weinberg Equilibrium for Multiallelic Genes |

2012-07-11 | hypothesestest | Confidence Intervals and Tests of Statistical Hypotheses |

2012-07-11 | msr | Morse-Smale approximation, regression and visualization |

2012-07-10 | mlbench | Machine Learning Benchmark Problems |

2012-07-10 | mvtmeta | Multivariate meta-analysis |

2012-07-09 | extraBinomial | Extra-binomial approach for pooled sequencing data |

2012-07-09 | SECP | Statistical Estimation of Cluster Parameters (SECP) |

2012-07-07 | CPE | Concordance Probability Estimates in Survival Analysis |

2012-07-06 | NLRoot | searching for the root of equation |

2012-07-06 | WMDB | Discriminant Analysis Methods by Weight Mahalanobis Distance and bayes |

2012-07-05 | ncg | Computes the noncentral gamma function |

2012-07-04 | p3state.msm | Analyzing survival data |

2012-07-03 | myepisodes | MyEpisodes RSS/API functions |

2012-07-02 | CR | Power Calculation for Weighted Log-Rank Tests in Cure Rate Models |

2012-07-02 | rCUR | CUR decomposition package |

2012-07-02 | rda | Shrunken Centroids Regularized Discriminant Analysis |

2012-06-29 | packS4 | Toy example of S4 package |

2012-06-28 | elasticnet | Elastic-Net for Sparse Estimation and Sparse PCA |

2012-06-28 | RAD | Fit RAD models to biological data |

2012-06-25 | ada | ada: an R package for stochastic boosting |

2012-06-25 | ETAS | Modeling earthquake data using Epidemic Type Aftershock Sequence model |

2012-06-25 | gclus | Clustering Graphics |

2012-06-22 | adaptMCMC | Implementation of a generic adaptive Monte Carlo Markov Chain sampler |

2012-06-21 | ezglm | selects significant non-additive interaction between two variables using fast GLM implementation |

2012-06-21 | psy | Various procedures used in psychometry |

2012-06-20 | Metrics | Evaluation metrics for machine learning |

2012-06-20 | RVideoPoker | Play Video Poker with R |

2012-06-20 | sperrorest | Spatial Error Estimation and Variable Importance |

2012-06-19 | AMAP.Seq | Compare Gene Expressions from 2-Treatment RNA-Seq Experiments |

2012-06-19 | MMIX | Model selection uncertainty and model mixing |

2012-06-19 | sparseLDA | Sparse Discriminant Analysis |

2012-06-18 | tourrGui | A Tour GUI using gWidgets |

2012-06-17 | crossmatch | The Cross-match Test |

2012-06-15 | bisectr | Tools to find bad commits with git bisect |

2012-06-14 | dummies | Create dummy/indicator variables flexibly and efficiently |

2012-06-13 | clustergas | A hierarchical clustering method based on genetic algorithms |

2012-06-12 | paleoTS | Analyze paleontological time-series |

2012-06-11 | caribou | Estimation of caribou abundance based on large scale aggregations monitored by radio telemetry |

2012-06-11 | extrafontdb | Package for holding the database for the extrafont package |

2012-06-09 | rrlda | Robust Regularized Linear Discriminant Analysis |

2012-06-08 | CHCN | Canadian Historical Climate Network |

2012-06-07 | R330 | An R package for Stats 330 |

2012-06-06 | mpMap | Multi-parent RIL genetic analysis |

2012-06-05 | bios2mds | From BIOlogical Sequences to MultiDimensional Scaling |

2012-06-05 | RIFS | Random Iterated Function System (RIFS) |

2012-06-04 | MorseGen | Simple raw data generator based on user-specified summary statistics |

2012-06-04 | Voss | Generic Voss algorithm (random sequential additions) |

2012-06-03 | SimpleTable | Bayesian Inference and Sensitivity Analysis for Causal Effects from 2 x 2 and 2 x 2 x K Tables in the Presence of Unmeasured Confounding |

2012-06-01 | hiPOD | hierarchical Pooled Optimal Design |

2012-06-01 | howmany | A lower bound for the number of correct rejections |

2012-06-01 | quantregForest | Quantile Regression Forests |

2012-06-01 | relaxo | Relaxed Lasso |

2012-05-31 | OIdata | Data sets and supplements (OpenIntro) |

2012-05-30 | foodweb | visualisation and analysis of food web networks |

2012-05-30 | intpoint | linear programming solver by the interior point method and graphically (two dimensions) |

2012-05-28 | disp2D | 2D Hausdorff and Simplex Dispersion Orderings |

2012-05-28 | plus | Penalized Linear Unbiased Selection |

2012-05-26 | multcompView | Visualizations of Paired Comparisons |

2012-05-26 | OpenCL | Interface allowing R to use OpenCL |

2012-05-25 | fgof | Fast Goodness-of-fit Test |

2012-05-25 | Maeswrap | Wrapper functions for MAESTRA/MAESPA |

2012-05-24 | BinNor | Simultaneous generation of multivariate binary and normal variates |

2012-05-24 | WeightedPortTest | Weighted Portmanteau Tests for Time Series Goodness-of-fit |

2012-05-23 | qtutils | Miscellaneous Qt-based utilities |

2012-05-22 | iterLap | Approximate probability densities by iterated Laplace Approximations |

2012-05-19 | irtrees | Estimation of Tree-Based Item Response Models |

2012-05-18 | makeProject | Creates an empty package framework for the LCFD format |

2012-05-17 | msgps | Degrees of freedom of elastic net, adaptive lasso and generalized elastic net |

2012-05-17 | QUIC | Regularized sparse inverse covariance matrix estimation |

2012-05-17 | simSummary | Simulation summary |

2012-05-16 | bayesm | Bayesian Inference for Marketing/Micro-econometrics |

2012-05-16 | M3 | Reading M3 files |

2012-05-16 | primer | Functions and data for A Primer of Ecology with R |

2012-05-15 | bayesclust | Tests/Searches for significant clusters in genetic data |

2012-05-15 | ri | ri: R package for performing randomization-based inference for experiments |

2012-05-14 | cumplyr | Extends ddply to allow calculation of cumulative quantities |

2012-05-14 | cvTools | Cross-validation tools for regression models |

2012-05-13 | SortableHTMLTables | Turns a data frame into an HTML file containing a sortable table |

2012-05-12 | frailtyHL | Frailty Models via H-likelihood |

2012-05-11 | dafs | Data analysis for forensic scientists |

2012-05-09 | plmDE | Additive partially linear models for differential gene expression analysis |

2012-05-08 | iCluster | Integrative clustering of multiple genomic data types |

2012-05-07 | CityPlot | Visualization of structure and contents of a database |

2012-05-06 | clime | Constrained L1-minimization for Inverse (covariance) Matrix Estimation |

2012-05-05 | discreteMTP | Multiple testing procedures for discrete test statistics |

2012-05-05 | tensor | Tensor product of arrays |

2012-05-04 | kappalab | Non-additive measure and integral manipulation functions |

2012-05-04 | RSeed | borenstein analysis |

2012-05-03 | CDNmoney | Components of Canadian Monetary and Credit Aggregates |

2012-05-03 | EvalEst | Dynamic Systems Estimation - extensions |

2012-05-02 | lassoshooting | L1 regularized regression (Lasso) solver using the Cyclic Coordinate Descent algorithm aka Lasso Shooting |

2012-05-02 | rscproxy | statconn: provides portable C-style interface to R (StatConnector) |

2012-05-02 | tsne | T-distributed Stochastic Neighbor Embedding for R (t-SNE) |

2012-05-01 | condmixt | Conditional Density Estimation with Neural Network Conditional Mixtures |

2012-04-28 | GUniFrac | Generalized UniFrac distances |

2012-04-27 | weightedKmeans | Weighted KMeans Clustering |

2012-04-25 | superdiag | R Code for Testing Markov Chain Nonconvergence |

2012-04-21 | labeledLoop | Labeled Loop |

2012-04-20 | dkDNA | Diffusion kernels on a set of genotypes |

2012-04-19 | bcp | A Package for Performing a Bayesian Analysis of Change Point Problems |

2012-04-17 | blighty | United Kingdom coastlines |

2012-04-17 | JohnsonDistribution | Johnson Distribution |

2012-04-16 | GeneCycle | Identification of Periodically Expressed Genes |

2012-04-15 | mseapca | Metabolite set enrichment analysis for factor loading in principal component analysis |

2012-04-13 | LIHNPSD | Poisson Subordinated Distribution |

2012-04-12 | mvnormtest | Normality test for multivariate variables |

2012-04-12 | reweight | Adjustment of Survey Respondent Weights |

2012-04-12 | sROC | Nonparametric Smooth ROC Curves for Continuous Data |

2012-04-11 | mmds | Mixture Model Distance Sampling (mmds) |

2012-04-11 | waffect | A package to simulate constrained phenotypes under a disease model H1 |

2012-04-10 | aod | Analysis of Overdispersed Data |

2012-04-10 | BayesDA | Functions and Datasets for the book "Bayesian Data Analysis" |

2012-04-10 | cccrm | CCC-RM |

2012-04-10 | elec.strat | Functions for election audits using stratified random samples |

2012-04-10 | ElemStatLearn | Data sets, functions and examples from the book: "The Elements of Statistical Learning, Data Mining, Inference, and Prediction" by Trevor Hastie, Robert Tibshirani and Jerome Friedman |

2012-04-10 | varbvs | Variational inference for Bayesian variable selection |

2012-04-09 | negenes | Estimating the number of essential genes in a genome |

2012-04-07 | gooJSON | Google JSON Data Interpreter for R |

2012-04-06 | bigdata | Big Data Analytics |

2012-04-06 | race | Racing methods for the selection of the best |

2012-04-05 | lordif | Logistic Regression Differential Item Functioning using IRT |

2012-04-04 | BHH2 | Useful Functions for Box, Hunter and Hunter II |

2012-04-04 | corpora | Statistics and data sets for corpus frequency data |

2012-04-04 | Fahrmeir | Data from the book "Multivariate Statistical Modelling Based on Generalized Linear Models", first edition, by Ludwig Fahrmeir and Gerhard Tutz |

2012-04-04 | SenSrivastava | Datasets from Sen & Srivastava |

2012-04-03 | FinAsym | Classifies implicit trading activity from market quotes and computes the probability of informed trading |

2012-04-03 | zipfR | Statistical models for word frequency distributions |

2012-04-02 | apsrtable | apsrtable model-output formatter for social science |

2012-04-02 | gldist | An Asymmetry-Steepness Parameterization of the Generalized Lambda Distribution |

2012-03-31 | powerSurvEpi | Power and sample size calculation for survival analysis of epidemiological studies |

2012-03-31 | RcmdrPlugin.epack | Rcmdr plugin for time series |

2012-03-30 | fossil | Palaeoecological and Palaeogeographical Analysis Tools |

2012-03-30 | gridDebug | Debugging Grid Graphics |

2012-03-30 | gridGraphviz | Drawing Graphs with Grid |

2012-03-29 | ICSNP | Tools for Multivariate Nonparametrics |

2012-03-28 | WWGbook | Functions and datasets for WWGbook |

2012-03-27 | gamair | Data for "GAMs: An Introduction with R" |

2012-03-26 | DIRECT | Bayesian Clustering of Multivariate Data Under the Dirichlet-Process Prior |

2012-03-26 | FBN | FISH Based Normalization and Copy Number inference of SNP microarray data |

2012-03-26 | mlgt | Multi-Locus Geno-Typing |

2012-03-24 | MHadaptive | General Markov Chain Monte Carlo for Bayesian Inference using adaptive Metropolis-Hastings sampling |

2012-03-23 | BSDA | Basic Statistics and Data Analysis |

2012-03-23 | eigenmodel | Semiparametric factor and regression models for symmetric relational data |

2012-03-23 | filehashSQLite | Simple key-value database using SQLite |

2012-03-23 | SPA3G | SPA3G: R package for the method of Li and Cui (2012) |

2012-03-23 | TRAMPR | TRFLP Analysis and Matching Package for R |

2012-03-22 | ISwR | Introductory Statistics with R |

2012-03-22 | mixlow | mixlow method for assessing drug synergism |

2012-03-21 | lle | Locally linear embedding |

2012-03-21 | MCAPS | MCAPS data and results |

2012-03-21 | mvtsplot | Multivariate Time Series Plot |

2012-03-21 | pseudo | Pseudo - observations |

2012-03-21 | represent | Determine the representativity of two multidimensional data sets |

2012-03-21 | stashR | A Set of Tools for Administering SHared Repositories |

2012-03-20 | popbio | Construction and analysis of matrix population models |

2012-03-20 | QuantPsyc | Quantitative Psychology Tools |

2012-03-19 | ALS | multivariate curve resolution alternating least squares (MCR-ALS) |

2012-03-19 | AUCRF | Variable Selection with Random Forest and the Area Under the Curve |

2012-03-19 | merror | Accuracy and Precision of Measurements |

2012-03-19 | mgpd | mgpd: Functions for multivariate generalized Pareto distribution (MGPD of Type II) |

2012-03-19 | nnls | The Lawson-Hanson algorithm for non-negative least squares (NNLS) |

2012-03-18 | LCAextend | Latent Class Analysis (LCA) with familial dependence in extended pedigrees |

2012-03-18 | PSAgraphics | Propensity Score Analysis Graphics |

2012-03-17 | DeducerPlugInExample | Deducer Plug-in Example |

2012-03-17 | DeducerPlugInScaling | Reliability and factor analysis plugin |

2012-03-16 | bmd | Benchmark dose analysis for dose-response data |

2012-03-16 | R2wd | Write MS-Word documents from R |

2012-03-16 | truncdist | Truncated Random Variables |

2012-03-15 | VarSwapPrice | Pricing a variance swap on an equity index |

2012-03-14 | PKgraph | Model diagnostics for population pharmacokinetic models |

2012-03-14 | stockPortfolio | Build stock models and analyze stock portfolios |

2012-03-12 | MDR | Detect gene-gene interactions using multifactor dimensionality reduction |

2012-03-12 | zipcode | U.S. ZIP Code database for geocoding |

2012-03-09 | qLearn | Estimation and inference for Q-learning |

2012-03-08 | eqtl | Tools for analyzing eQTL experiments: A complementary to Karl Broman's 'qtl' package for genome-wide analysis |

2012-03-07 | JPSurv | Methods for population-based cancer survival analysis |

2012-03-07 | tabuSearch | R based tabu search algorithm |

2012-03-05 | soobench | Single Objective Optimization Benchmark Functions |

2012-03-04 | AmericanCallOpt | This package includes pricing function for selected American call options with underlying assets that generate payouts |

2012-03-03 | qtbase | Interface between R and Qt |

2012-03-03 | qtpaint | Qt-based painting infrastructure |

2012-03-01 | CRM | Continual Reassessment Method (CRM) for Phase I Clinical Trials |

2012-03-01 | curvetest | The package will formally test two curves represented by discrete data sets to be statistically equal or not when the errors of the two curves were assumed either equal or not using the tube formula to calculate the tail probabilities |

2012-03-01 | rBeta2009 | The Beta Random Number and Dirichlet Random Vector Generating Functions |

2012-02-29 | benchden | 28 benchmark densities from Berlinet/Devroye (1994) |

2012-02-27 | superpc | Supervised principal components |

2012-02-21 | RMallow | Fit Multi-Modal Mallows' Models to ranking data |

2012-02-20 | barcode | Barcode distribution plots |

2012-02-20 | ops | Optimal Power Space Transformation |

2012-02-19 | perturb | Tools for evaluating collinearity |

2012-02-17 | capushe | Capushe, data-driven slope estimation and dimension jump |

2012-02-17 | WideLM | Fitting many skinny linear models to a single data set |

2012-02-15 | gamlss.nl | Fitting non linear parametric GAMLSS models |

2012-02-13 | dispmod | Dispersion models |

2012-02-11 | idbg | R debugger |

2012-02-10 | pairheatmap | A tool for comparing heatmaps |

2012-02-07 | udunits2 | udunits-2 bindings for R |

2012-02-06 | futile.paradigm | A framework for working in a functional programming paradigm in R |

2012-02-05 | SCperf | Supply Chain Perform |

2012-02-02 | DiscreteLaplace | Discrete Laplace distribution |

2012-02-02 | rlecuyer | R interface to RNG with multiple streams |

2012-01-31 | bayesMCClust | Mixtures-of-Experts Markov Chain Clustering and Dirichlet Multinomial Clustering |

2012-01-31 | rstream | Streams of random numbers |

2012-01-31 | vacem | Vaccination Activities Coverage Estimation Model |

2012-01-30 | Rwinsteps | Running Winsteps in R |

2012-01-30 | semdiag | Structural equation modeling diagnostics |

2012-01-28 | geotools | Geo tools |

2012-01-28 | tlmec | Linear Student-t Mixed-Effects Models with Censored Data |

2012-01-27 | MIPHENO | Mutant Identification through Probabilistic High throughput Enabled NOrmalization |

2012-01-24 | CALINE3 | R interface to Fortran 77 implementation of CALINE3 |

2012-01-24 | registry | Registry infrastructure |

2012-01-23 | rasclass | Supervised Raster Image Classification |

2012-01-22 | SEER2R | reading and writing SEER*STAT data files |

2012-01-21 | fastmatch | Fast match() function |

2012-01-20 | apple | Approximate Path for Penalized Likelihood Estimators |

2012-01-18 | cytoDiv | Cytometric diversity indices |

2012-01-17 | ifa | Independent Factor Analysis |

2012-01-16 | DBGSA | methods of distance-based gene set functional enrichment analysis |

2012-01-15 | GillespieSSA | Gillespie's Stochastic Simulation Algorithm (SSA) |

2012-01-15 | PKPDmodels | Pharmacokinetic/pharmacodynamic models |

2012-01-14 | cepp | Context Driven Exploratory Projection Pursuit |

2012-01-13 | eiPack | eiPack: Ecological Inference and Higher-Dimension Data Management |

2012-01-13 | lga | Tools for linear grouping analysis (LGA) |

2012-01-13 | pgam | Poisson-Gamma Additive Models |

2012-01-13 | randaes | Random number generator based on AES cipher |

2012-01-12 | lisp | List-processing à la SRFI-1 |

2012-01-07 | events | Store and manipulate event data |

2012-01-07 | latticeDensity | Density estimation and nonparametric regression on irregular regions |

2012-01-07 | ucminf | General-purpose unconstrained non-linear optimization |

2012-01-06 | rportfolios | Random portfolio generation |

2012-01-05 | hett | Heteroscedastic t-regression |

2012-01-05 | MImix | Mixture summary method for multiple imputation |

2012-01-04 | mcbiopi | Matrix Computation Based Identification Of Prime Implicants |

2012-01-03 | GOGANPA | GO-Functional-Network-based Gene-Set-Analysis |

2012-01-03 | rpsychi | Statistics for psychiatric research |

2011-12-30 | cin | Causal Inference for Neuroscience |

2011-12-30 | fame | Interface for FAME time series database |

2011-12-30 | wasim | Visualisation and analysis of output files of the hydrological model WASIM |

2011-12-28 |