CRAN Package Check Results for Package YplantQMC

Last updated on 2015-09-06 23:47:49.

Check Details

Version: 0.6-4
Check: dependencies in R code
Result: NOTE
    'library' or 'require' call to ‘maps’ in package code.
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.6-4
Check: R code for possible problems
Result: NOTE
    DAPAQMC: no visible global function definition for ‘read.table’
    KE: no visible global function definition for ‘runif’
    STARbar.plant3d: no visible global function definition for
     ‘flush.console’
    STARbar.plant3d: no visible global function definition for
     ‘txtProgressBar’
    STARbar.plant3d: no visible global function definition for
     ‘setTxtProgressBar’
    STARbar.plant3d: no visible global function definition for ‘aggregate’
    STARbar.plant3dlist: no visible global function definition for
     ‘flush.console’
    Silhouette: no visible global function definition for ‘chull’
    YplantDay.plant3d: no visible global function definition for
     ‘flush.console’
    YplantDay.plant3d : makepsrdata: no visible global function definition
     for ‘aggregate’
    changeinternodes: no visible global function definition for
     ‘write.table’
    checkHemi: no visible global function definition for ‘plot’
    checkHemi: no visible global function definition for ‘points’
    constructplant: no visible global function definition for ‘read.table’
    includePhy.plant3dlist: no visible global function definition for
     ‘read.csv’
    installQuasiMC: no visible global function definition for
     ‘download.file’
    installQuasiMC: no visible global function definition for ‘unzip’
    installQuasiMC: no visible global function definition for ‘untar’
    leafdispersion: no visible global function definition for ‘sd’
    leafdispersion: no visible binding for global variable ‘sd’
    modifypfile: no visible global function definition for ‘write.table’
    pathlen: no visible global function definition for ‘plot’
    plot.leaffile: no visible global function definition for ‘par’
    plot.leaffile: no visible global function definition for ‘plot’
    plot.leaffile: no visible global function definition for ‘polygon’
    plot.leaffile: no visible global function definition for ‘points’
    plot.plant3dlist: no visible global function definition for ‘plot’
    plot.projectedplant3d: no visible global function definition for ‘plot’
    plot.projectedplant3d: no visible global function definition for
     ‘abline’
    plot.projectedplant3d: no visible global function definition for
     ‘points’
    plot.projectedplant3d: no visible global function definition for
     ‘polygon’
    plot.projectedplant3d: no visible global function definition for
     ‘legend’
    plot.stand3d: no visible global function definition for ‘plot’
    plot.tracedplant: no visible global function definition for ‘rect’
    plot.yphemi: no visible global function definition for ‘par’
    plot.yphemi: no visible global function definition for ‘plot’
    plot.yphemi: no visible global function definition for ‘polygon’
    plot.yphemi: no visible global function definition for ‘grey’
    plot.yphemi: no visible global function definition for ‘points’
    plot.yphemi: no visible global function definition for ‘text’
    plot.yphemi: no visible global function definition for ‘legend’
    plot.yplantsim: no visible global function definition for ‘par’
    plot.yplantsim: no visible global function definition for ‘abline’
    plot.yplantsim: no visible global function definition for ‘legend’
    plot.yplantsim: no visible global function definition for ‘plot’
    plot.yplocation: no visible global function definition for ‘points’
    plot.ypmet: no visible global function definition for ‘par’
    plot.ypmet: no visible global function definition for ‘abline’
    plot.ypmet: no visible global function definition for ‘box’
    plot.ypmet: no visible global function definition for ‘axis’
    plot.ypmet: no visible global function definition for ‘mtext’
    plot.ypmet: no visible global function definition for ‘legend’
    randomplant: no visible global function definition for ‘runif’
    randomplant: no visible global function definition for ‘write.table’
    readCAN: no visible global function definition for ‘read.table’
    readl: no visible global function definition for ‘read.table’
    readl: no visible global function definition for ‘na.omit’
    readp: no visible global function definition for ‘read.table’
    readplantlist: no visible global function definition for ‘read.csv’
    readplantlist: no visible global function definition for
     ‘flush.console’
    replaceangles: no visible global function definition for ‘write.table’
    runQMCUOC: no visible global function definition for ‘read.table’
    runYplant.plant3d: no visible global function definition for
     ‘read.table’
    runYplant.plant3d: no visible global function definition for
     ‘weighted.mean’
    setHemi: no visible global function definition for ‘read.csv’
    setHemi: no visible global function definition for ‘read.table’
    setLocation: no visible global function definition for ‘locator’
    setLocation: no visible global function definition for ‘flush.console’
    setMet: no visible global function definition for ‘approxfun’
    setMet: no visible global function definition for ‘read.csv’
    summary.plant3d: no visible global function definition for
     ‘weighted.mean’
    summary.plant3d: no visible global function definition for ‘sd’
    summary.plant3dlist: no visible global function definition for
     ‘txtProgressBar’
    summary.plant3dlist: no visible global function definition for
     ‘setTxtProgressBar’
    summary.plant3dlist: no visible global function definition for
     ‘write.table’
    summary.yplantsimlist: no visible global function definition for
     ‘write.table’
    viewplot : addbranches: no visible global function definition for
     ‘segments’
    viewplot: no visible global function definition for ‘par’
    viewplot: no visible global function definition for ‘plot’
    writeOUTfile: no visible global function definition for ‘write.table’
    writePSRfile: no visible global function definition for ‘write.table’
    writerandomdiffuse: no visible global function definition for ‘runif’
    writerandomdiffuse: no visible global function definition for
     ‘write.table’
    writeturtlediffuse: no visible global function definition for
     ‘write.table’
    xmastime: no visible global function definition for ‘rnorm’
    ypreport: no visible global function definition for ‘pdf’
    ypreport : emptyplot: no visible global function definition for ‘par’
    ypreport : emptyplot: no visible global function definition for ‘plot’
    ypreport: no visible global function definition for ‘text’
    ypreport: no visible global function definition for ‘abline’
    ypreport: no visible global function definition for ‘par’
    ypreport: no visible global function definition for ‘capture.output’
    ypreport: no visible global function definition for ‘plot’
    ypreport: no visible global function definition for ‘title’
    ypreport: no visible global function definition for ‘dev.off’
    Undefined global functions or variables:
     abline aggregate approxfun axis box capture.output chull dev.off
     download.file flush.console grey legend locator mtext na.omit par pdf
     plot points polygon read.csv read.table rect rnorm runif sd segments
     setTxtProgressBar text title txtProgressBar untar unzip weighted.mean
     write.table
    Consider adding
     importFrom("grDevices", "chull", "dev.off", "grey", "pdf")
     importFrom("graphics", "abline", "axis", "box", "legend", "locator",
     "mtext", "par", "plot", "points", "polygon", "rect",
     "segments", "text", "title")
     importFrom("stats", "aggregate", "approxfun", "na.omit", "rnorm",
     "runif", "sd", "weighted.mean")
     importFrom("utils", "capture.output", "download.file", "flush.console",
     "read.csv", "read.table", "setTxtProgressBar",
     "txtProgressBar", "untar", "unzip", "write.table")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64