netgsa: Network-Based Gene Set Analysis

The netgsa-package contains functions for carrying out Network-based Gene Set Analysis by incorporating external information about interactions among genes, as well as novel interactions learned from data.

Version: 2.0
Depends: cvTools, corpcor, glasso, glmnet, igraph
Suggests: MASS
Published: 2015-03-08
Author: Ali Shojaie and Jing Ma
Maintainer: Jing Ma <mjing at umich.edu>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: http://arxiv.org/abs/1411.7919
NeedsCompilation: no
CRAN checks: netgsa results

Downloads:

Reference manual: netgsa.pdf
Package source: netgsa_2.0.tar.gz
Windows binaries: r-devel: netgsa_2.0.zip, r-release: netgsa_2.0.zip, r-oldrel: netgsa_2.0.zip
OS X Snow Leopard binaries: r-release: netgsa_2.0.tgz, r-oldrel: netgsa_2.0.tgz
OS X Mavericks binaries: r-release: netgsa_2.0.tgz
Old sources: netgsa archive