signalHsmm: Predict Presence of Signal Peptides

Predicts presence of signal peptides in eukaryotic protein using hidden semi-Markov models. The implemented algorithm can be accessed both from command line and GUI.

Version: 1.3
Depends: R (≥ 3.0.0)
Imports: biogram, graphics, seqinr, shiny, stats, utils
LinkingTo: Rcpp
Suggests: knitr, markdown, shinyAce
Published: 2015-07-03
Author: Michal Burdukiewicz [cre, aut], Piotr Sobczyk [aut]
Maintainer: Michal Burdukiewicz <michalburdukiewicz at gmail.com>
License: GPL-3
URL: https://github.com/michbur/signalhsmm
NeedsCompilation: yes
Citation: signalHsmm citation info
Materials: README ChangeLog
CRAN checks: signalHsmm results

Downloads:

Reference manual: signalHsmm.pdf
Package source: signalHsmm_1.3.tar.gz
Windows binaries: r-devel: signalHsmm_1.3.zip, r-release: signalHsmm_1.3.zip, r-oldrel: signalHsmm_1.3.zip
OS X Snow Leopard binaries: r-release: signalHsmm_1.3.tgz, r-oldrel: not available
OS X Mavericks binaries: r-release: signalHsmm_1.3.tgz