GenCAT: Genetic Class Association Testing (GenCAT)

Implementation of the genetic class level association testing (GenCAT) method from SNP level association data. Refer to: "Qian, J., Reed, E., Nunez, S., Qu, L., Reilly, M., Foulkes, A. (2015) Testing class-level genetic associations using single-element summary statistics. (Under review).".

Version: 1.0.1
Depends: R (≥ 2.10), stats, dplyr, doParallel, ggplot2, foreach, parallel, methods
Suggests: snpStats, knitr
Published: 2015-07-01
Author: Eric Reed, Sara Nu<c3><b1>ez, Jing Qian, Andrea Foulkes
Maintainer: Eric Reed <reeder at>
License: GPL-2
NeedsCompilation: no
CRAN checks: GenCAT results


Reference manual: GenCAT.pdf
Vignettes: GenCAT Package
Package source: GenCAT_1.0.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X Snow Leopard binaries: r-release: not available, r-oldrel: not available
OS X Mavericks binaries: r-release: GenCAT_1.0.1.tgz