Learns direct microbe-microbe interaction networks using a Poisson
multivariate-normal hierarchical model with an L1 penalized precision
matrix. Optimization is carried out using an iterative conditional modes
algorithm.
| Version: |
1.0.1 |
| Depends: |
R (≥ 3.1.2), glasso (≥ 1.8), trust (≥ 0.1-6), MASS (≥
7.3-35), testthat (≥ 0.9.1) |
| Suggests: |
knitr |
| Published: |
2015-05-18 |
| Author: |
Surojit Biswas, Meredith McDonald, Derek S. Lundberg, Jeffery L. Dangl,
Vladimir Jojic |
| Maintainer: |
Surojit Biswas <surojitbiswas at g.harvard.edu> |
| License: |
GPL-2 |
| NeedsCompilation: |
no |
| CRAN checks: |
MInt results |