Linear Mixed effect Model Splines (lmms) implements linear mixed effect model splines for
modelling and differential expression for highly dimensional data sets:
investNoise for quality control and filterNoise for removing
non-informative trajectories; lmmSpline to model time course expression
profiles and lmmsDE performs differential expression analysis to identify
differential expression between groups, time and/or group x time
interaction.
| Version: |
1.3 |
| Depends: |
R (≥ 3.0.0), ggplot2 |
| Imports: |
stats, methods, nlme, lmeSplines, parallel, reshape2, gdata, gplots, gridExtra |
| Published: |
2015-07-17 |
| Author: |
Jasmin Straube [aut, cre],
Kim-Anh Le Cao [aut],
Emma Huang [aut],
Dominique Gorse [ctb] |
| Maintainer: |
Jasmin Straube <j.straube at qfab.org> |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: |
no |
| CRAN checks: |
lmms results |