mkin: Routines for Fitting Kinetic Models with One or More State Variables to Chemical Degradation Data

Calculation routines based on the FOCUS Kinetics Report (2006). Includes a function for conveniently defining differential equation models, model solution based on eigenvalues if possible or using numerical solvers and a choice of the optimisation methods made available by the 'FME' package. If a C compiler (on windows: 'Rtools') is installed, differential equation models are solved using compiled C functions. Please note that no warranty is implied for correctness of results or fitness for a particular purpose.

Version: 0.9-41
Depends: minpack.lm, rootSolve, inline, parallel
Imports: stats, graphics, methods, FME, deSolve, R6
Suggests: knitr, testthat, microbenchmark
Published: 2015-11-09
Author: Johannes Ranke [aut, cre, cph], Katrin Lindenberger [ctb], René Lehmann [ctb], Eurofins Regulatory AG [cph]
Maintainer: Johannes Ranke <jranke at>
License: GPL-2 | GPL-3 [expanded from: GPL]
NeedsCompilation: no
Materials: README NEWS
In views: DifferentialEquations
CRAN checks: mkin results


Reference manual: mkin.pdf
Vignettes: Example evaluation of FOCUS Example Dataset D
Example evaluation of FOCUS Laboratory Data L1 to L3
Performance benefit by using compiled model definitions in mkin
Example evaluation of FOCUS dataset Z
Routines for fitting kinetic models with one or more state variables to chemical degradation data
Package source: mkin_0.9-41.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X Snow Leopard binaries: r-release: mkin_0.9-41.tgz, r-oldrel: mkin_0.9-35.tgz
OS X Mavericks binaries: r-release: mkin_0.9-41.tgz
Old sources: mkin archive