polyfreqs: Bayesian Population Genomics in Autopolyploids

Implements a Gibbs sampling algorithm to perform Bayesian inference on biallelic SNP frequencies, genotypes and heterozygosity (observed and expected) in a population of autopolyploids.

Version: 1.0.0
Depends: R (≥ 3.0)
Imports: Rcpp
LinkingTo: Rcpp, RcppArmadillo
Suggests: knitr, coda
Published: 2015-09-25
Author: Paul Blischak [aut, cre]
Maintainer: Paul Blischak <blischak.4 at osu.edu>
BugReports: https://github.com/pblischak/polyfreqs/issues
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: http://pblischak.github.io/polyfreqs/, https://github.com/pblischak/polyfreqs
NeedsCompilation: yes
Materials: README
CRAN checks: polyfreqs results

Downloads:

Reference manual: polyfreqs.pdf
Vignettes: An introduction to polyfreqs
Package source: polyfreqs_1.0.0.tar.gz
Windows binaries: r-devel: polyfreqs_1.0.0.zip, r-release: polyfreqs_1.0.0.zip, r-oldrel: polyfreqs_1.0.0.zip
OS X Snow Leopard binaries: r-release: polyfreqs_1.0.0.tgz, r-oldrel: not available
OS X Mavericks binaries: r-release: polyfreqs_1.0.0.tgz