Available CRAN Packages By Date of Publication

Date Package Title
2016-01-18 CepLDA Discriminant Analysis of Time Series in the Presence of Within-Group Spectral Variability
2016-01-18 memisc Tools for Management of Survey Data and the Presentation of Analysis Results
2016-01-18 mistral Methods in Structural Reliability
2016-01-18 RItools Randomization Inference Tools
2016-01-17 DJL Distance Measure Based Judgment and Learning
2016-01-17 freqparcoord Novel Methods for Parallel Coordinates
2016-01-17 nlme Linear and Nonlinear Mixed Effects Models
2016-01-17 OECD Search and Extract Data from the OECD
2016-01-17 proportion Inference on Single Binomial Proportion and Bayesian Computations
2016-01-17 RcmdrPlugin.NMBU R Commander Plug-in for University Level Applied Statistics
2016-01-17 tuber Client for the YouTube API
2016-01-16 bayesPop Probabilistic Population Projection
2016-01-16 CRTgeeDR Doubly Robust Inverse Probability Weighted Augmented GEE Estimator
2016-01-16 cycleRtools Tools for Cycling Data Analysis
2016-01-16 funtimes Functions for Time Series Analysis
2016-01-16 ggtern An Extension to 'ggplot2', for the Creation of Ternary Diagrams
2016-01-16 mldr Exploratory Data Analysis and Manipulation of Multi-Label Data Sets
2016-01-16 mldr.datasets R Ultimate Multilabel Dataset Repository
2016-01-16 mvtboost Tree Boosting for Multivariate Outcomes
2016-01-16 OriGen Fast Spatial Ancestry via Flexible Allele Frequency Surfaces
2016-01-16 Relatedness An Algorithm to Infer Relatedness
2016-01-16 SDR Subgroup Discovery Algorithms for R
2016-01-16 simr Power Analysis for Generalised Linear Mixed Models by Simulation
2016-01-16 srvyr 'dplyr'-Like Syntax for Summary Statistics of Survey Data
2016-01-16 stplanr Sustainable Transport Planning
2016-01-16 vardpoor Variance Estimation for Sample Surveys by the Ultimate Cluster Method
2016-01-16 visualFields Statistical Methods for Visual Fields
2016-01-15 Actigraphy Actigraphy Data Analysis
2016-01-15 ahp Analytic Hierarchy Process
2016-01-15 bingat Binary Graph Analysis Tools
2016-01-15 blockseg Two Dimensional Change-Points Detection
2016-01-15 codyn Community Dynamics Metrics
2016-01-15 deconstructSigs Identifies Signatures Present in a Tumor Sample
2016-01-15 DescribeDisplay An Interface to the DescribeDisplay GGobi Plugin
2016-01-15 fdaPDE Regression with Partial Differential Regularizations, using the Finite Element Method
2016-01-15 fdasrvf Elastic Functional Data Analysis
2016-01-15 FDRsampsize Compute Sample Size that Meets Requirements for Average Power and FDR
2016-01-15 geojsonio Convert Data from and to 'geoJSON' or 'topoJSON'
2016-01-15 GFD Tests for General Factorial Designs
2016-01-15 gimms Download and Process GIMMS NDVI3g Data
2016-01-15 Gmisc Descriptive Statistics, Transition Plots, and More
2016-01-15 HKprocess Hurst-Kolmogorov Process
2016-01-15 HMP Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP
2016-01-15 kantorovich Kantorovich Distance Between Probability Measures
2016-01-15 lhs Latin Hypercube Samples
2016-01-15 logmult Log-Multiplicative Models, Including Association Models
2016-01-15 miniUI Shiny UI Widgets for Small Screens
2016-01-15 mixlm Mixed Model ANOVA and Statistics for Education
2016-01-15 mmcm Modified Maximum Contrast Method
2016-01-15 networkDynamic Dynamic Extensions for Network Objects
2016-01-15 pageviews An API Client for Wikimedia Traffic Data
2016-01-15 PASWR2 Probability and Statistics with R, Second Edition
2016-01-15 pez Phylogenetics for the Environmental Sciences
2016-01-15 PowerTOST Power and Sample Size Based on Two One-Sided t-Tests (TOST) for (Bio)Equivalence Studies
2016-01-15 prototest Inference on Prototypes from Clusters of Features
2016-01-15 qmethod Analysis of Subjective Perspectives Using Q Methodology
2016-01-15 qrmtools Tools for Quantitative Risk Management
2016-01-15 randomForestSRC Random Forests for Survival, Regression and Classification (RF-SRC)
2016-01-15 relsurv Relative Survival
2016-01-15 rsvg Render SVG Images into High-Quality Bitmap Arrays
2016-01-15 sharx Models and Data Sets for the Study of Species-Area Relationships
2016-01-15 SocialMediaMineR A Social Media Search and Analytic Tool
2016-01-15 stm Estimation of the Structural Topic Model
2016-01-15 TreatmentSelection Evaluate Treatment Selection Biomarkers
2016-01-15 WikidataR API Client Library for 'Wikidata'
2016-01-14 abctools Tools for ABC Analyses
2016-01-14 averisk Calculation of Average Population Attributable Fractions and Confidence Intervals
2016-01-14 bapred Batch Effect Removal (in Phenotype Prediction using Gene Data)
2016-01-14 dcmle Hierarchical Models Made Easy with Data Cloning
2016-01-14 edeaR Exploratory and Descriptive Event-Based Data Analysis
2016-01-14 GGally Extension to ggplot2
2016-01-14 ggsn North Symbols and Scale Bars for Maps Created with 'ggplot2' or 'ggmap'
2016-01-14 globe Plot 2D and 3D Views of the Earth, Including Major Coastline
2016-01-14 labstats Data Sets for the Book "Experimental Design for Laboratory Biologists"
2016-01-14 mapdata Extra Map Databases
2016-01-14 PVAClone Population Viability Analysis with Data Cloning
2016-01-14 rerddap General Purpose Client for 'ERDDAP' Servers
2016-01-14 rio A Swiss-Army Knife for Data I/O
2016-01-14 RMixpanel R API for Mixpanel
2016-01-14 rNOMADS An Interface to the NOAA Operational Model Archive and Distribution System
2016-01-14 seqHMM Hidden Markov Models for Life Sequences and Other Multivariate, Multichannel Categorical Time Series
2016-01-14 ShapeChange Change-Point Estimation using Shape-Restricted Splines
2016-01-14 smint Smooth Multivariate Interpolation for Gridded and Scattered Data
2016-01-14 sSDR Tools Developed for Structured Sufficient Dimension Reduction (sSDR)
2016-01-14 yuima The YUIMA Project Package for SDEs
2016-01-13 BinaryEMVS Variable Selection for Binary Data Using the EM Algorithm
2016-01-13 breakpoint An R Package for Multiple Break-Point Detection via the Cross-Entropy Method
2016-01-13 cofeatureR Generate Cofeature Matrices
2016-01-13 dChipIO Methods for Reading dChip Files
2016-01-13 DecisionCurve Calculate and Plot Decision Curves
2016-01-13 drgee Doubly Robust Generalized Estimating Equations
2016-01-13 entropart Entropy Partitioning to Measure Diversity
2016-01-13 frailtypack General Frailty Models: Shared, Joint and Nested Frailty Models with Prediction
2016-01-13 funcy Functional Clustering Algorithms
2016-01-13 geozoo Zoo of Geometric Objects
2016-01-13 GiniWegNeg Computing the Gini Coefficient for Weighted and Negative Attributes
2016-01-13 HWxtest Exact Tests for Hardy-Weinberg Proportions
2016-01-13 hyfo Hydrology and Climate Forecasting
2016-01-13 lpSolveAPI R Interface to 'lp_solve' Version
2016-01-13 MASSTIMATE Body Mass Estimation Equations for Vertebrates
2016-01-13 matconv A Code Converter from the Matlab/Octave Language to R
2016-01-13 molaR Dental Surface Complexity Measurement Tools
2016-01-13 nbpMatching Functions for Optimal Non-Bipartite Matching
2016-01-13 ontologySimilarity Functions for Calculating Ontological Similarities
2016-01-13 openssl Toolkit for Encryption, Signatures and Certificates Based on OpenSSL
2016-01-13 plot3D Plotting Multi-Dimensional Data
2016-01-13 proftools Profile Output Processing Tools for R
2016-01-13 QCAtools Helper Functions for QCA in R
2016-01-13 rase Range Ancestral State Estimation for Phylogeography and Comparative Analyses
2016-01-13 rcanvec Access and Plot CanVec and CanVec+ Data for Rapid Basemap Creation in Canada
2016-01-13 Rgbp Hierarchical Modeling and Frequency Method Checking on Overdispersed Gaussian, Poisson, and Binomial Data
2016-01-13 rPowerSampleSize Sample Size Computations Controlling the Type-II Generalized Family-Wise Error Rate
2016-01-13 SamplingStrata Optimal Stratification of Sampling Frames for Multipurpose Sampling Surveys
2016-01-13 SimReg Similarity Regression Functions
2016-01-13 sivipm Sensitivity Indices with Dependent Inputs
2016-01-13 sjmisc Data Transformation and Labelled Data Utility Functions
2016-01-13 StatMatch Statistical Matching
2016-01-13 svs Tools for Semantic Vector Spaces
2016-01-13 tweet2r Twitter Collector and Export to 'SQLite', 'postGIS' and 'GIS' Format
2016-01-13 WikipediR A MediaWiki API Wrapper
2016-01-13 wux Wegener Center Climate Uncertainty Explorer
2016-01-13 xkcd Plotting ggplot2 Graphics in an XKCD Style
2016-01-12 BDWreg Bayesian Inference for Discrete Weibull Regression
2016-01-12 CircOutlier Detection of Outliers in Circular-Circular Regression
2016-01-12 cjoint AMCE Estimator for Conjoint Experiments
2016-01-12 dclone Data Cloning and MCMC Tools for Maximum Likelihood Methods
2016-01-12 Directional Directional Statistics
2016-01-12 enveomics.R Various R Functions from the Kostas Lab
2016-01-12 ggcorrplot Visualization of a Correlation Matrix using 'ggplot2'
2016-01-12 ggrepel Repulsive Text and Label Geoms for 'ggplot2'
2016-01-12 highcharter A Wrapper for the 'Highcharts' Library
2016-01-12 HistDAWass Histogram-Valued Data Analysis
2016-01-12 hsdar Manage, Analyse and Simulate Hyperspectral Data
2016-01-12 intercure Cure Rate Estimators for Interval Censored Data
2016-01-12 localgauss Estimating Local Gaussian Parameters
2016-01-12 MCPAN Multiple Comparisons Using Normal Approximation
2016-01-12 mefa Multivariate Data Handling in Ecology and Biogeography
2016-01-12 midastouch Multiple Imputation by Distance Aided Donor Selection
2016-01-12 mixtools Tools for Analyzing Finite Mixture Models
2016-01-12 msltrend Improved Techniques to Estimate Trend, Velocity and Acceleration from Sea Level Records
2016-01-12 networkDynamicData Dynamic (Longitudinal) Network Datasets
2016-01-12 pnea Parametric Network Enrichment Analysis
2016-01-12 primerTree Visually Assessing the Specificity and Informativeness of Primer Pairs
2016-01-12 Rankcluster Model-Based Clustering for Multivariate Partial Ranking Data
2016-01-12 RcmdrPlugin.UCA UCA Rcmdr Plug-in
2016-01-12 RcppParallel Parallel Programming Tools for 'Rcpp'
2016-01-12 rgrass7 Interface Between GRASS 7 Geographical Information System and R
2016-01-12 ridigbio Interface to the iDigBio Data API
2016-01-12 rodd Optimal Discriminating Designs
2016-01-12 RRreg Correlation and Regression Analyses for Randomized Response Data
2016-01-12 SALES Elastic Net and (Adaptive) Lasso Penalized Sparse Asymmetric Least Squares (SALES) and Coupled Sparse Asymmetric Least Squares (COSALES) using Coordinate Descent and Proximal Gradient Algorithms
2016-01-12 shiny Web Application Framework for R
2016-01-12 vegan Community Ecology Package
2016-01-12 ViSiElse A Visual Tool for Behaviour Analysis
2016-01-11 ARTool Aligned Rank Transform
2016-01-11 concordance Product Concordance
2016-01-11 cruts Interface to Climatic Research Unit Time-Series Version 3.21 Data
2016-01-11 dismo Species Distribution Modeling
2016-01-11 gsEasy Gene Set Enrichment Analysis in R
2016-01-11 gSEM Semi-Supervised Generalized Structural Equation Modeling
2016-01-11 lgcp Log-Gaussian Cox Process
2016-01-11 LPR Lasso and Partial Ridge
2016-01-11 mmppr Markov Modulated Poisson Process for Unsupervised Event Detection in Time Series of Counts
2016-01-11 nparACT Non-Parametric Measures of Actigraphy Data
2016-01-11 ontologyIndex Functions for Reading Ontologies into R
2016-01-11 ontologyPlot Functions for Visualising Sets of Ontological Terms
2016-01-11 PhySortR A Fast, Flexible Tool for Sorting Phylogenetic Trees
2016-01-11 prcbench Testing Workbench for Precision-Recall Curves
2016-01-11 pRF Permutation Significance for Random Forests
2016-01-11 quanteda Quantitative Analysis of Textual Data
2016-01-11 reservoir Tools for Analysis, Design, and Operation of Water Supply Storages
2016-01-11 rlm Robust Fitting of Linear Model
2016-01-11 RNeo4j Neo4j Driver for R
2016-01-11 rpdo Pacific Decadal Oscillation Index
2016-01-11 soilphysics Soil Physical Analysis
2016-01-11 telegram R Wrapper Around the Telegram Bot API
2016-01-11 urca Unit Root and Cointegration Tests for Time Series Data
2016-01-10 aroma.affymetrix Analysis of Large Affymetrix Microarray Data Sets
2016-01-10 cit Causal Inference Test
2016-01-10 coefplot Plots Coefficients from Fitted Models
2016-01-10 desiR Desirability Functions for Ranking, Selecting, and Integrating Data
2016-01-10 ggthemes Extra Themes, Scales and Geoms for 'ggplot2'
2016-01-10 Rcpp Seamless R and C++ Integration
2016-01-10 Rsomoclu Somoclu
2016-01-10 SGP Student Growth Percentiles & Percentile Growth Trajectories
2016-01-10 text2vec Fast and Modern Text Mining Framework - Vectorization and Word Embeddings
2016-01-10 useful A Collection of Handy, Useful Functions
2016-01-09 EPGLM Gaussian Approximation of Bayesian Binary Regression Models
2016-01-09 eyetrackingR Eye-Tracking Data Analysis
2016-01-09 gdm Functions for Generalized Dissimilarity Modeling
2016-01-09 lazyWeave LaTeX Wrappers for R Users
2016-01-09 ores Connector to the Objective Revision Evaluation Service (ORES)
2016-01-09 phonics Phonetic Spelling Algorithms
2016-01-09 phylolm Phylogenetic Linear Regression
2016-01-09 preproviz Tools for Visualization of Interdependent Data Quality Issues
2016-01-09 RandomFields Simulation and Analysis of Random Fields
2016-01-09 REBayes Empirical Bayes Estimation and Inference in R
2016-01-09 rstanarm Bayesian Applied Regression Modeling via Stan
2016-01-09 secr Spatially Explicit Capture-Recapture
2016-01-09 venn Draw Venn Diagrams
2016-01-08 awsMethods Class and Methods Definitions for Packages 'aws', 'adimpro', 'fmri' and 'dti'
2016-01-08 bmeta Bayesian Meta-Analysis and Meta-Regression
2016-01-08 ChannelAttribution Markov Model for the Online Multi-Channel Attribution Problem
2016-01-08 clickstream Analyzes Clickstreams Based on Markov Chains
2016-01-08 digest Create Compact Hash Digests of R Objects
2016-01-08 earth Multivariate Adaptive Regression Splines
2016-01-08 embryogrowth Tools to Analyze the Thermal Reaction Norm of Embryo Growth
2016-01-08 fwi.fbp Fire Weather Index System and Fire Behaviour Prediction System Calculations
2016-01-08 gbutils Simulation of Real and Complex Numbers and Small Programming Utilities
2016-01-08 GGIR Raw Accelerometer Data Analysis
2016-01-08 HelpersMG Tools for Earth Meteorological Analysis
2016-01-08 hit Hierarchical Inference Testing
2016-01-08 iptools Manipulate, Validate and Resolve 'IP' Addresses
2016-01-08 IsotopeR Stable Isotope Mixing Model
2016-01-08 jomo Multilevel Joint Modelling Multiple Imputation
2016-01-08 MakefileR Create 'Makefiles' Using R
2016-01-08 mvnfast Fast Multivariate Normal Methods
2016-01-08 overlapping Estimation of Overlapping in Empirical Distributions
2016-01-08 PharmacoGx Analysis of Large-Scale Pharmacogenomic Data
2016-01-08 robustHD Robust Methods for High-Dimensional Data
2016-01-08 S2sls Spatial Two Stage Least Squares Estimation
2016-01-08 SimInf A Framework for Stochastic Disease Spread Simulations
2016-01-08 Sleuth2 Data Sets from Ramsey and Schafer's "Statistical Sleuth (2nd Ed)"
2016-01-08 Sleuth3 Data Sets from Ramsey and Schafer's "Statistical Sleuth (3rd Ed)"
2016-01-08 VARSEDIG An Algorithm for Morphometric Characters Selection and Statistical Validation in Morphological Taxonomy
2016-01-08 vrcp Change Point Estimation for Regression with Varying Segments and Heteroscedastic Variances
2016-01-08 vtreat Simple Variable Treatment
2016-01-08 yCrypticRNAs Cryptic Transcription Analysis in Yeast
2016-01-07 aRpsDCA Arps Decline Curve Analysis in R
2016-01-07 AsioHeaders 'Asio' C++ Header Files
2016-01-07 asnipe Animal Social Network Inference and Permutations for Ecologists
2016-01-07 assortnet Calculate the Assortativity Coefficient of Weighted and Binary Networks
2016-01-07 corHMM Analysis of Binary Character Evolution
2016-01-07 divo Tools for Analysis of Diversity and Similarity in Biological Systems
2016-01-07 dynRB Dynamic Range Boxes
2016-01-07 elastic General Purpose Interface to 'Elasticsearch'
2016-01-07 FactoMineR Multivariate Exploratory Data Analysis and Data Mining
2016-01-07 geigen Calculate Generalized Eigenvalues, the Generalized Schur Decomposition and the Generalized Singular Value Decomposition of a Matrix Pair with Lapack
2016-01-07 glmvsd Variable Selection Deviation Measures and Instability Tests for High-Dimensional Generalized Linear Models
2016-01-07 gyriq Kinship-Adjusted Survival SNP-Set Analysis
2016-01-07 hisse Hidden State Speciation and Extinction
2016-01-07 icenReg Regression Models for Interval Censored Data
2016-01-07 imager Image Processing Library Based on CImg
2016-01-07 knitr A General-Purpose Package for Dynamic Report Generation in R
2016-01-07 mgm Estimating Mixed Graphical Models
2016-01-07 MuMIn Multi-Model Inference
2016-01-07 neuroim Data Structures and Handling for Neuroimaging Data
2016-01-07 OUwie Analysis of Evolutionary Rates in an OU Framework
2016-01-07 rgr Applied Geochemistry EDA
2016-01-07 rJava Low-Level R to Java Interface
2016-01-07 SafeQuant A Toolbox for the Analysis of Proteomics Data
2016-01-07 solarPos Solar Position Algorithm for Solar Radiation Applications
2016-01-06 aroma.core Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework
2016-01-06 BacArena Modeling Framework for Cellular Communities in their Environments
2016-01-06 caret Classification and Regression Training
2016-01-06 clue Cluster Ensembles
2016-01-06 conover.test Conover-Iman Test of Multiple Comparisons Using Rank Sums
2016-01-06 dma Dynamic Model Averaging
2016-01-06 dunn.test Dunn's Test of Multiple Comparisons Using Rank Sums
2016-01-06 dynatopmodel Implementation of the Dynamic TOPMODEL Hydrological Model
2016-01-06 easyPubMed Searching and Retrieving Scientific Publication Data from PubMed
2016-01-06 eiCompare Compares EI, Goodman, RxC Estimates
2016-01-06 Epi A Package for Statistical Analysis in Epidemiology
2016-01-06 ezknitr Avoid the Typical Working Directory Pain When Using 'knitr'
2016-01-06 ggExtra Add Marginal Histograms to 'ggplot2', and More 'ggplot2' Enhancements
2016-01-06 googleformr Collect Data Programmatically by POST Methods to Google Forms
2016-01-06 gsheet Download Google Sheets Using Just the URL
2016-01-06 IRISSeismic Classes and Methods for Seismic Data Analysis
2016-01-06 lightsout Implementation of the 'Lights Out' Puzzle Game
2016-01-06 matlib Matrix Functions for Teaching and Learning Linear Algebra and Multivariate Statistics
2016-01-06 MKmisc Miscellaneous Functions from M. Kohl
2016-01-06 modules Self Contained Units of Source Code
2016-01-06 mvmesh Multivariate Meshes and Histograms in Arbitrary Dimensions
2016-01-06 PK Basic Non-Compartmental Pharmacokinetics
2016-01-06 plotKML Visualization of Spatial and Spatio-Temporal Objects in Google Earth
2016-01-06 PMCMR Calculate Pairwise Multiple Comparisons of Mean Rank Sums
2016-01-06 RcmdrPlugin.FactoMineR Graphical User Interface for FactoMineR
2016-01-06 rjags Bayesian Graphical Models using MCMC
2016-01-06 Rmonkey A Survey Monkey R Client
2016-01-06 rotations Tools for Working with Rotation Data
2016-01-06 rvg R Graphics Devices for Vector Graphics Output
2016-01-06 sejmRP An Information About Deputies and Votings in Polish Diet from Seventh to Eighth Term of Office
2016-01-06 shades Simple Colour Manipulation
2016-01-06 shinyjs Perform Common JavaScript Operations in Shiny Apps using Plain R Code
2016-01-06 shinystan Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models
2016-01-06 SimRAD Simulations to Predict the Number of RAD and GBS Loci
2016-01-06 skmeans Spherical k-Means Clustering
2016-01-06 stlplus Enhanced Seasonal Decomposition of Time Series by Loess
2016-01-06 trend Non-Parametric Trend Tests and Change-Point Detection
2016-01-06 wordnet WordNet Interface
2016-01-05 aLFQ Estimating Absolute Protein Quantities from Label-Free LC-MS/MS Proteomics Data
2016-01-05 broman Karl Broman's R Code
2016-01-05 cds Constrained Dual Scaling for Detecting Response Styles
2016-01-05 chopthin The Chopthin Resampler
2016-01-05 ExomeDepth Calls Copy Number Variants from Targeted Sequence Data
2016-01-05 gamlss Generalised Additive Models for Location Scale and Shape
2016-01-05 gamlss.data GAMLSS Data
2016-01-05 hiddenf The All-Configurations, Maximum-Interaction F-Test for Hidden Additivity
2016-01-05 likeLTD Tools to Evaluate DNA Profile Evidence
2016-01-05 lsbclust Least-Squares Bilinear Clustering for Three-Way Data
2016-01-05 metaplus Robust Meta-Analysis and Meta-Regression
2016-01-05 mmand Mathematical Morphology in Any Number of Dimensions
2016-01-05 pcadapt Principal Component Analysis for Outlier Detection
2016-01-05 PDQutils PDQ Functions via Gram Charlier, Edgeworth, and Cornish Fisher Approximations
2016-01-05 rangeBuilder Occurrence Filtering and Generation of Species Range Polygons
2016-01-05 R.filesets Easy Handling of and Access to Files Organized in Structured Directories
2016-01-05 RImagePalette Extract the Colors from Images
2016-01-05 RSAGA SAGA Geoprocessing and Terrain Analysis in R
2016-01-05 rsml Plant Root System Markup Language (RSML) File Processing
2016-01-05 rstan R Interface to Stan
2016-01-05 rticles Article Formats for R Markdown
2016-01-05 sgd Stochastic Gradient Descent for Scalable Estimation
2016-01-05 SimplicialCubature Integration of Functions Over Simplices
2016-01-05 sprintfr An Easy Interface to String Formatting
2016-01-05 statmod Statistical Modeling
2016-01-05 timedelay Time Delay Estimation for Stochastic Time Series of Gravitationally Lensed Quasars
2016-01-05 uniah Unimodal Additive Hazards Model
2016-01-05 vdg Variance Dispersion Graphs and Fraction of Design Space Plots
2016-01-05 visreg Visualization of Regression Models
2016-01-04 AbsFilterGSEA Improved False Positive Control of Gene-Permuting GSEA with Absolute Filtering
2016-01-04 bfork Basic Unix Process Control
2016-01-04 boxr Interface for the 'Box.com API'
2016-01-04 bst Gradient Boosting
2016-01-04 CALF Coarse Approximation Linear Function
2016-01-04 cancerTiming Estimation of Temporal Ordering of Cancer Abnormalities
2016-01-04 cg Compare Groups, Analytically and Graphically
2016-01-04 CryptRndTest Statistical Tests for Cryptographic Randomness
2016-01-04 datacheckr Data Frame Column Name, Class and Value Checking
2016-01-04 dotwhisker Dot-and-Whisker Plots of Regression Results
2016-01-04 ecd Elliptic Distribution Based on Elliptic Curves
2016-01-04 ENMeval Automated Runs and Evaluations of Ecological Niche Models
2016-01-04 EnvNicheR Niche Estimation
2016-01-04 fields Tools for Spatial Data
2016-01-04 ggalt Extra Coordinate Systems, Geoms and Statistical Transformations for 'ggplot2'
2016-01-04 ggmcmc Tools for Analyzing MCMC Simulations from Bayesian Inference
2016-01-04 gjam Generalized Joint Attribute Modeling
2016-01-04 GoFKernel Testing Goodness-of-Fit with the Kernel Density Estimator
2016-01-04 hdnom Nomograms for High-Dimensional Cox Models
2016-01-04 hot.deck Multiple Hot-Deck Imputation
2016-01-04 infuser A Very Basic Templating Engine
2016-01-04 LiblineaR.ACF Linear Classification with Online Adaptation of Coordinate Frequencies
2016-01-04 M4comp Data from the M4 Time Series Forecasting Competition
2016-01-04 maps Draw Geographical Maps
2016-01-04 PlayerRatings Dynamic Updating Methods for Player Ratings Estimation
2016-01-04 purrr Functional Programming Tools
2016-01-04 qtlc Densitometric Analysis of Thin-Layer Chromatography Plates
2016-01-04 rgl 3D Visualization Using OpenGL
2016-01-04 simmer Just Let it Simmer
2016-01-04 textcat N-Gram Based Text Categorization
2016-01-04 USAboundaries Historical and Contemporary Boundaries of the United States of America
2016-01-04 wakefield Generate Random Data Sets
2016-01-03 cghseg Segmentation Methods for Array CGH Analysis
2016-01-03 commonmark Bindings to the CommonMark Reference Implementation
2016-01-03 dtwclust Time Series Clustering with Dynamic Time Warping Distance
2016-01-03 forestFloor Visualizes Random Forests with Feature Contributions
2016-01-03 grpss Group Screening and Selection
2016-01-03 httping 'Ping' 'URLs' to Time 'Requests'
2016-01-03 icensmis Study Design and Data Analysis in the Presence of Error-Prone Diagnostic Tests and Self-Reported Outcomes
2016-01-03 metaheur Metaheuristic Optimization Framework for Preprocessing Combinations
2016-01-03 NNLM Fast and Versatile Non-Negative Matrix Factorization
2016-01-03 provenance Statistical Toolbox for Sedimentary Provenance Analysis
2016-01-03 rainbow Rainbow Plots, Bagplots and Boxplots for Functional Data
2016-01-03 rangeMapper A Platform for the Study of Macroecology of Life History Traits
2016-01-03 request High Level 'HTTP' Client
2016-01-03 robustlmm Robust Linear Mixed Effects Models
2016-01-03 samplingVarEst Sampling Variance Estimation
2016-01-03 StanHeaders C++ Header Files for Stan
2016-01-03 tempcyclesdata Climate Data from Wang and Dillon
2016-01-02 aucm AUC Maximization
2016-01-02 catR Procedures to Generate Patterns under Computerized Adaptive Testing
2016-01-02 choroplethr Simplify the Creation of Choropleth Maps in R
2016-01-02 forega Floating-Point Genetic Algorithms with Statistical Forecast Based Inheritance Operator
2016-01-02 isoph Isotonic Proportional Hazards Model
2016-01-02 NIPTeR Fast and Accurate Trisomy Prediction in Non-Invasive Prenatal Testing
2016-01-02 RAM R for Amplicon-Sequencing-Based Microbial-Ecology
2016-01-02 rdian Client Library for The Guardian
2016-01-02 RefManageR Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management
2016-01-02 rem Relational Event Models (REM)
2016-01-02 simsalapar Tools for Simulation Studies in Parallel
2016-01-02 stringdist Approximate String Matching and String Distance Functions
2016-01-01 BNSP Bayesian Non- and Semi-Parametric Model Fitting
2016-01-01 cricketr Analyze Cricketers Based on ESPN Cricinfo Statsguru
2016-01-01 hwde Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci
2016-01-01 MPLikelihoodWB Modified Profile Likelihood Estimation for Weibull Shape and Regression Parameters
2016-01-01 msma Multiblock Sparse Multivariable Analysis
2016-01-01 preprocomb Tools for Preprocessing Combinations
2016-01-01 rmarkdown Dynamic Documents for R
2016-01-01 statar Tools Inspired by Stata to Manipulate Tabular Data
2016-01-01 stochvol Efficient Bayesian Inference for Stochastic Volatility (SV) Models
2016-01-01 TransferEntropy The Transfer Entropy Package
2015-12-31 arfima Fractional ARIMA (and Other Long Memory) Time Series Modeling
2015-12-31 bc3net Gene Regulatory Network Inference with Bc3net
2015-12-31 BMRV Bayesian Models for Rare Variant Association Analysis
2015-12-31 choroplethrAdmin1 Contains an Administrative-Level-1 Map of the World
2015-12-31 DTR Estimation and Comparison of Dynamic Treatment Regimes
2015-12-31 eva Extreme Value Analysis with Goodness-of-Fit Testing
2015-12-31 FCNN4R Fast Compressed Neural Networks for R
2015-12-31 future A Future API for R
2015-12-31 gapminder Data from Gapminder
2015-12-31 geomnet Network Visualization in the 'ggplot2' Framework
2015-12-31 hdr Interface to the UNDR Human Development Report API
2015-12-31 markophylo Markov Chain Models for Phylogenetic Trees
2015-12-31 mpoly Symbolic Computation and More with Multivariate Polynomials
2015-12-31 networkD3 D3 JavaScript Network Graphs from R
2015-12-31 optiRum Financial Functions & More
2015-12-31 ParallelPC Paralellised Versions of Constraint Based Causal Discovery Algorithms
2015-12-31 RNeXML Semantically Rich I/O for the 'NeXML' Format
2015-12-31 rsunlight Interface to 'Sunlight' Foundation 'APIs'
2015-12-31 Rvcg Manipulations of Triangular Meshes Based on the 'VCGLIB' API
2015-12-31 Sim.DiffProc Simulation of Diffusion Processes
2015-12-31 textmineR Functions for Text Mining and Topic Modeling
2015-12-31 viridis Default Color Maps from 'matplotlib'
2015-12-31 viridisLite Default Color Maps from 'matplotlib' (Lite Version)
2015-12-30 acc Functions for Processing and Analyzing Accelerometer Data
2015-12-30 BIOdry Multilevel Modeling of Dendroclimatical Fluctuations
2015-12-30 FinCal Time Value of Money, Time Series Analysis and Computational Finance
2015-12-30 geoelectrics 3D-Visualization of Geoelectric Resistivity Measurement Profiles
2015-12-30 gRain Graphical Independence Networks
2015-12-30 GSE Robust Estimation in the Presence of Cellwise and Casewise Contamination and Missing Data
2015-12-30 ifctools Italian Fiscal Code ('Codice Fiscale') Utilities
2015-12-30 nat NeuroAnatomy Toolbox for Analysis of 3D Image Data
2015-12-30 nhanesA NHANES Data Retrieval
2015-12-30 plspm.formula Formula Based PLS Path Modeling
2015-12-30 pseval Methods for Evaluating Principal Surrogates of Treatment Response
2015-12-30 RcmdrPlugin.KMggplot2 An Rcmdr Plug-in for Kaplan-Meier Plots and Other Plots by Using the ggplot2 Package
2015-12-30 robreg3S Three-Step Regression and Inference for Cellwise and Casewise Contamination
2015-12-30 rvalues R-Values for Ranking in High-Dimensional Settings
2015-12-30 sdmvspecies Create Virtual Species for Species Distribution Modelling
2015-12-30 soundecology Soundscape Ecology
2015-12-30 spdynmod Spatio-Dynamic Wetland Plant Communities Model
2015-12-30 webp A New Format for Lossless and Lossy Image Compression
2015-12-29 cIRT Choice Item Response Theory
2015-12-29 dc3net Inferring Disease Networks via Differential Network Inference
2015-12-29 Deducer A Data Analysis GUI for R
2015-12-29 diffeR Metrics of Difference for Comparing Pairs of Maps
2015-12-29 doBy Groupwise Statistics, LSmeans, Linear Contrasts, Utilities
2015-12-29 GiANT Gene Set Uncertainty in Enrichment Analysis
2015-12-29 htmltools Tools for HTML
2015-12-29 jackstraw Statistical Inference of Variables Driving Systematic Variation
2015-12-29 PopED Population (and Individual) Optimal Experimental Design
2015-12-29 profileR Profile Analysis of Multivariate Data in R
2015-12-29 protr Generating Various Numerical Representation Schemes of Protein Sequence
2015-12-29 RDS Respondent-Driven Sampling
2015-12-29 seroincidence Estimating Infection Rates from Serological Data
2015-12-29 spatstat Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests
2015-12-29 TOC Total Operating Characteristic Curve and ROC Curve
2015-12-29 WGCNA Weighted Correlation Network Analysis
2015-12-29 xtal Crystallization Toolset
2015-12-28 abn Modelling Multivariate Data with Additive Bayesian Networks
2015-12-28 BEST Bayesian Estimation Supersedes the t-Test
2015-12-28 BH Boost C++ Header Files
2015-12-28 BiasedUrn Biased Urn Model Distributions
2015-12-28 Blaunet Calculate and Analyze Blau Status for Measuring Social Distance
2015-12-28 DTRlearn Learning Algorithms for Dynamic Treatment Regimes
2015-12-28 GMDH Short Term Forecasting via GMDH-Type Neural Network Algorithms
2015-12-28 lamW Lambert-W Function
2015-12-28 listenv Environments Behaving (Almost) as Lists
2015-12-28 markmyassignment Automatic Marking of R Assignments
2015-12-28 multilevelPSA Multilevel Propensity Score Analysis
2015-12-28 qiimer Work with QIIME Output Files in R
2015-12-28 rglwidget 'rgl' in 'htmlwidgets' Framework
2015-12-28 rmgarch Multivariate GARCH Models
2015-12-28 rrepast Invoke 'Repast Simphony' Simulation Models
2015-12-28 Rsolnp General Non-Linear Optimization
2015-12-28 SACCR SA Counterparty Credit Risk under Basel III
2015-12-28 vdmR Visual Data Mining Tools for R
2015-12-27 cdfquantreg Quantile Regression for Random Variables on the Unit Interval
2015-12-27 identifyr Clean Unique Identifiers
2015-12-27 lessR Less Code, More Results
2015-12-27 meteoForecast Numerical Weather Predictions
2015-12-27 MissingDataGUI A GUI for Missing Data Exploration
2015-12-27 MultAlloc Optimal Allocation in Stratified Sampling
2015-12-27 RGA A Google Analytics API Client
2015-12-27 selectiveInference Tools for Post-Selection Inference
2015-12-26 lcmm Extended Mixed Models Using Latent Classes and Latent Processes
2015-12-26 oasis Multiple Sclerosis Lesion Segmentation using Magnetic Resonance Imaging (MRI)
2015-12-26 OutbreakTools Basic Tools for the Analysis of Disease Outbreaks
2015-12-26 ShapeSelectForest Shape Selection for Landsat Time Series of Forest Dynamics
2015-12-26 spacetime Classes and Methods for Spatio-Temporal Data
2015-12-26 validateRS One-Sided Multivariate Testing Procedures for Rating Systems
2015-12-25 evd Functions for Extreme Value Distributions
2015-12-25 Matching Multivariate and Propensity Score Matching with Balance Optimization
2015-12-25 TideHarmonics Harmonic Analysis of Tides
2015-12-24 apcluster Affinity Propagation Clustering
2015-12-24 brainGraph Graph Theory Analysis of Brain MRI Data
2015-12-24 cffdrs Canadian Forest Fire Danger Rating System
2015-12-24 DataCombine Tools for Easily Combining and Cleaning Data Sets
2015-12-24 MediaK Calculate MeDiA_K Distance
2015-12-24 multifwf Read Fixed Width Format Files Containing Lines of Different Type
2015-12-24 r.jive Perform JIVE Decompositions for Multi-Source Data
2015-12-24 SchemaOnRead Automated Schema on Read
2015-12-24 shock Slope Heuristic for Block-Diagonal Covariance Selection in High Dimensional Gaussian Graphical Models
2015-12-24 ss3sim Fisheries Stock Assessment Simulation Testing with Stock Synthesis
2015-12-24 XNomial Exact Goodness-of-Fit Test for Multinomial Data with Fixed Probabilities
2015-12-23 batteryreduction An R Package for Data Reduction by Battery Reduction
2015-12-23 BlandAltmanLeh Plots (Slightly Extended) Bland-Altman Plots
2015-12-23 ftsa Functional Time Series Analysis
2015-12-23 heemod Models for Health Economic Evaluation
2015-12-23 interplot Plot the Effects of Variables in Interaction Terms
2015-12-23 kergp Gaussian Process Laboratory
2015-12-23 LexisPlotR Plot Lexis Diagrams for Demographic Purposes
2015-12-23 MRIaggr Management, Display, and Processing of Medical Imaging Data
2015-12-23 multisom Clustering a Dataset using Multi-SOM Algorithm
2015-12-23 PAactivPAL Summarize Daily Physical Activity from 'activPAL' Accelerometer Data
2015-12-23 population Models for Simulating Populations
2015-12-23 r4ss R Code for Stock Synthesis
2015-12-23 rdryad Access for Dryad Web Services
2015-12-23 Rknots Topological Analysis of Knotted Proteins, Biopolymers and 3D Structures
2015-12-23 SpatialTools Tools for Spatial Data Analysis
2015-12-23 sprm Sparse and Non-Sparse Partial Robust M Regression and Classification
2015-12-23 surveyplanning Survey Planning Tools
2015-12-23 sweidnumbr Handling of Swedish Identity Numbers
2015-12-23 toaster Big Data in-Database Analytics with Teradata Aster
2015-12-23 vcdExtra 'vcd' Extensions and Additions
2015-12-22 archiDART Plant Root System Architecture Analysis Using DART and RSML Files
2015-12-22 aSPU Adaptive Sum of Powered Score Test
2015-12-22 betalink Beta-Diversity of Species Interactions
2015-12-22 circlize Circular Visualization
2015-12-22 colourlovers R Client for the COLOURlovers API
2015-12-22 crmPack Object-Oriented Implementation of CRM Designs
2015-12-22 federalregister Client Package for the U.S. Federal Register API
2015-12-22 gear Geostatistical Analysis in R
2015-12-22 gistr Work with 'GitHub' 'Gists'
2015-12-22 HSAR Hierarchical Spatial Autoregressive Model (HSAR)
2015-12-22 IMP Interactive Model Performance Evaluation
2015-12-22 kequate The Kernel Method of Test Equating
2015-12-22 Lock5withR Datasets for 'Statistics: Unlocking the Power of Data'
2015-12-22 lumendb Lumen Database API Client
2015-12-22 plotROC Generate Useful ROC Curve Charts for Print and Interactive Use
2015-12-22 RPublica ProPublica API Client
2015-12-22 SimDesign Structure for Organizing Monte Carlo Simulation Designs
2015-12-22 spcosa Spatial Coverage Sampling and Random Sampling from Compact Geographical Strata
2015-12-22 spdep Spatial Dependence: Weighting Schemes, Statistics and Models
2015-12-22 sValues Measures of the Sturdiness of Regression Coefficients
2015-12-22 TcGSA Time-Course Gene Set Analysis
2015-12-22 tcR Advanced Data Analysis of Immune Receptor Repertoires
2015-12-22 weathermetrics Functions to Convert Between Weather Metrics
2015-12-21 auRoc Various Methods to Estimate the AUC
2015-12-21 aws.signature Amazon Web Services Request Signatures
2015-12-21 BDgraph Bayesian Graph Selection Based on Birth-Death MCMC Approach
2015-12-21 CFC Cause-Specific Framework for Competing-Risk Analysis
2015-12-21 clogitboost Boosting Conditional Logit Model
2015-12-21 clusrank Wilcoxon Rank Sum Test for Clustered Data
2015-12-21 coala A Framework for Coalescent Simulation
2015-12-21 diversitree Comparative Phylogenetic Analyses of Diversification
2015-12-21 dygraphs Interface to Dygraphs Interactive Time Series Charting Library
2015-12-21 FSA Functions for Simple Fisheries Stock Assessment Methods
2015-12-21 ggswissmaps Offers Various Swiss Maps as ggplot2 Objects
2015-12-21 gridGraphics Redraw Base Graphics Using 'grid' Graphics
2015-12-21 ltsa Linear Time Series Analysis
2015-12-21 metricsgraphics Create Interactive Charts with the JavaScript 'MetricsGraphics' Library
2015-12-21 morse MOdelling Tools for Reproduction and Survival Data in Ecotoxicology
2015-12-21 NlcOptim Solve Nonlinear Optimization with Nonlinear Constraints
2015-12-21 nnetpredint Prediction Intervals of Multi-Layer Neural Networks
2015-12-21 openair Tools for the Analysis of Air Pollution Data
2015-12-21 paleofire Analysis of Charcoal Records from the Global Charcoal Database
2015-12-21 precrec Calculate Accurate Precision-Recall and ROC Curves
2015-12-21 ProbYX Inference for the Stress-Strength Model R = P(Y<X)
2015-12-21 rgdal Bindings for the Geospatial Data Abstraction Library
2015-12-21 rms Regression Modeling Strategies
2015-12-21 scmamp Statistical Comparison of Multiple Algorithms in Multiple Problems
2015-12-21 statebins U.S. State Cartogram Heatmaps in R; an Alternative to Choropleth Maps for USA States
2015-12-21 surveyoutliers Helps Manage Outliers in Sample Surveys
2015-12-21 systemicrisk A Toolbox for Systemic Risk
2015-12-21 VarfromPDB Capture the Genes and Variants Related to a Genetic Disease from Public Databases
2015-12-21 VARsignR Sign Restrictions, Bayesian, Vector Autoregression Models
2015-12-21 visNetwork Network Visualization using 'vis.js' Library
2015-12-21 wq Exploring Water Quality Monitoring Data
2015-12-20 ContaminatedMixt Model-Based Clustering and Classification with the Multivariate Contaminated Normal Distribution
2015-12-20 depth.plot Multivariate Analogy of Quantiles
2015-12-20 GERGM Estimation and Fit Diagnostics for Generalized Exponential Random Graph Models
2015-12-20 lctools Local Correlation, Spatial Inequalities, Geographically Weighted Regression and Other Tools
2015-12-20 OAIHarvester Harvest Metadata Using OAI-PMH v2.0
2015-12-20 plotly Create Interactive Web Graphics via Plotly's JavaScript Graphing Library
2015-12-20 plotrix Various Plotting Functions
2015-12-20 qicharts Quality Improvement Charts
2015-12-20 stylo Functions for a Variety of Stylometric Analyses
2015-12-20 W3CMarkupValidator R Interface to W3C Markup Validation Services
2015-12-19 aqp Algorithms for Quantitative Pedology
2015-12-19 bujar Buckley-James Regression for Survival Data with High-Dimensional Covariates
2015-12-19 cowplot Streamlined Plot Theme and Plot Annotations for 'ggplot2'
2015-12-19 dynsim Dynamic Simulations of Autoregressive Relationships
2015-12-19 FWDselect Selecting Variables in Regression Models
2015-12-19 gets General-to-Specific (GETS) Modelling and Indicator Saturation Methods
2015-12-19 ggmap Spatial Visualization with ggplot2
2015-12-19 MTurkRGUI A Graphical User Interface for MTurkR
2015-12-19 prodlim Product-Limit Estimation for Censored Event History Analysis
2015-12-19 QCA Qualitative Comparative Analysis
2015-12-19 raster Geographic Data Analysis and Modeling
2015-12-19 RcppTOML 'Rcpp' Bindings to Parser for Tom's Obvious Markup Language
2015-12-19 R.rsp Dynamic Generation of Scientific Reports
2015-12-19 seriation Infrastructure for Ordering Objects Using Seriation
2015-12-19 TITAN2 Threshold Indicator Taxa Analysis
2015-12-18 astrochron A Computational Tool for Astrochronology
2015-12-18 binaryLogic Binary Logic
2015-12-18 bodenmiller Profilling of Peripheral Blood Mononuclear Cells using CyTOF
2015-12-18 clhs Conditioned Latin Hypercube Sampling
2015-12-18 confreq Configural Frequencies Analysis Using Log-Linear Modeling
2015-12-18 directlabels Direct Labels for Multicolor Plots
2015-12-18 equateIRT Direct, Chain and Average Equating Coefficients with Standard Errors Using IRT Methods
2015-12-18 extRemes Extreme Value Analysis
2015-12-18 fastR Foundations and Applications of Statistics Using R
2015-12-18 geosphere Spherical Trigonometry
2015-12-18 ggplot2 An Implementation of the Grammar of Graphics
2015-12-18 granovaGG Graphical Analysis of Variance Using ggplot2
2015-12-18 Hmisc Harrell Miscellaneous
2015-12-18 mangoTraining Mango Solutions Training Datasets
2015-12-18 mosaic Project MOSAIC Statistics and Mathematics Teaching Utilities
2015-12-18 mosaicData Project MOSAIC (mosaic-web.org) data sets
2015-12-18 needs Attaches and Installs Packages
2015-12-18 pbdMPI Programming with Big Data – Interface to MPI
2015-12-18 phenex Auxiliary Functions for Phenological Data Analysis
2015-12-18 picasso Pathwise Calibrated Sparse Shooting Algorithm
2015-12-18 PortfolioEffectHFT High Frequency Portfolio Analytics by PortfolioEffect
2015-12-18 recommenderlab Lab for Developing and Testing Recommender Algorithms
2015-12-18 sankey Sankey Diagrams
2015-12-18 SEMID Identifiability of Linear Structural Equation Models
2015-12-18 SpatialVx Spatial Forecast Verification
2015-12-18 TextoMineR Textual Statistics
2015-12-18 Ultimixt Bayesian Analysis of a Non-Informative Parametrization for Gaussian Mixture Distributions
2015-12-18 UpSetR A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets
2015-12-18 VBLPCM Variational Bayes Latent Position Cluster Model for Networks
2015-12-17 CCAGFA Bayesian Canonical Correlation Analysis and Group Factor Analysis
2015-12-17 evolqg Tools for Evolutionary Quantitative Genetics
2015-12-17 lsmeans Least-Squares Means
2015-12-17 MIICD Multiple Imputation for Interval Censored Data
2015-12-17 MPSEM Modeling Phylogenetic Signals using Eigenvector Maps
2015-12-17 rmumps Wrapper for MUMPS Library
2015-12-16 bayesmeta Bayesian Random-Effects Meta-Analysis
2015-12-16 BRugs Interface to the 'OpenBUGS' MCMC Software
2015-12-16 calACS Count All Common Subsequences
2015-12-16 ctsem Continuous Time Structural Equation Modelling
2015-12-16 dse Dynamic Systems Estimation (Time Series Package)
2015-12-16 envlpaster Enveloping the Aster Model
2015-12-16 euroMix Calculations for DNA Mixtures
2015-12-16 fourPNO Bayesian 4 Parameter Item Response Model
2015-12-16 gpDDE General Profiling Method for Delay Differential Equation
2015-12-16 keep Arrays with Better Control over Dimension Dropping
2015-12-16 knitrBootstrap Knitr Bootstrap Framework
2015-12-16 pamm Power Analysis for Random Effects in Mixed Models
2015-12-16 pbdZMQ Programming with Big Data – Interface to ZeroMQ
2015-12-16 PHeval Evaluation of the Proportional Hazards Assumption with a Standardized Score Process
2015-12-16 plfm Probabilistic Latent Feature Analysis
2015-12-16 qrcm Quantile Regression Coefficients Modeling
2015-12-16 RcppArmadillo 'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library
2015-12-16 R.devices Unified Handling of Graphics Devices
2015-12-16 rebus Build Regular Expressions in a Human Readable Way
2015-12-16 rebus.base Core Functionality for the 'rebus' Package
2015-12-16 rebus.datetimes Date and Time Extensions for the 'rebus' Package
2015-12-16 rebus.numbers Numeric Extensions for the 'rebus' Package
2015-12-16 rebus.unicode Unicode Extensions for the 'rebus' Package
2015-12-16 Rlabkey Data Exchange Between R and LabKey Server
2015-12-16 rpf Response Probability Functions
2015-12-16 RSGHB Functions for Hierarchical Bayesian Estimation: A Flexible Approach
2015-12-16 TAM Test Analysis Modules
2015-12-16 tfplot Time Frame User Utilities
2015-12-16 tframe Time Frame Coding Kernel
2015-12-16 TSdbi Time Series Database Interface
2015-12-16 TSsdmx 'TSdbi' Extension to Connect with 'SDMX'
2015-12-16 TTAinterfaceTrendAnalysis Temporal Trend Analysis Graphical Interface
2015-12-15 bayesGARCH Bayesian Estimation of the GARCH(1,1) Model with Student-t Innovations
2015-12-15 CarletonStats Functions For Statistics Classes At Carleton College
2015-12-15 censusr Collect Data from the Census API
2015-12-15 dbscan Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms
2015-12-15 explor Interactive Interfaces for Results Exploration
2015-12-15 fungible Fungible Coefficients and Monte Carlo Functions
2015-12-15 gaston Genetic Data Manipulation (Quality Control, GRM and LD Computations, PCA), Linear Mixed Models (AIREML Algorithm), Association Testing
2015-12-15 hail Read HYDRA Rainfall Data
2015-12-15 HH Statistical Analysis and Data Display: Heiberger and Holland
2015-12-15 jmcm Joint Mean-Covariance Models using 'Armadillo' and S4
2015-12-15 likert Functions to Analyze and Visualize Likert Type Items
2015-12-15 madness Automatic Differentiation of Multivariate Operations
2015-12-15 mapview Interactive Viewing of Spatial Objects in R
2015-12-15 matrixStats Functions that Apply to Rows and Columns of Matrices (and to Vectors)
2015-12-15 Matrix.utils Data Frame Operations on Sparse and Dense Matrix Objects
2015-12-15 missMDA Handling Missing Values with Multivariate Data Analysis
2015-12-15 Morpho Calculations and Visualisations Related to Geometric Morphometrics
2015-12-15 pcev Principal Component of Explained Variance
2015-12-15 phangorn Phylogenetic Analysis in R
2015-12-15 plm Linear Models for Panel Data
2015-12-15 RandomFieldsUtils Utilities for the Simulation and Analysis of Random Fields
2015-12-15 rcbalance Large, Sparse Optimal Matching with Refined Covariate Balance
2015-12-15 RMark R Code for Mark Analysis
2015-12-15 rTensor Tools for Tensor Analysis and Decomposition
2015-12-15 simPH Tools for Simulating and Plotting Quantities of Interest Estimated from Cox Proportional Hazards Models
2015-12-15 treecm Centre of Mass Assessment and Consolidation of Trees
2015-12-15 TriMatch Propensity Score Matching of Non-Binary Treatments
2015-12-15 waffle Create Waffle Chart Visualizations in R
2015-12-14 AF Model-Based Estimation of Confounder-Adjusted Attributable Fractions
2015-12-14 arules Mining Association Rules and Frequent Itemsets
2015-12-14 btergm Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood
2015-12-14 captr Client for the Captricity API
2015-12-14 car Companion to Applied Regression
2015-12-14 ComICS Computational Methods for Immune Cell-Type Subsets
2015-12-14 crunch Crunch.io Data Tools
2015-12-14 dendsort Modular Leaf Ordering Methods for Dendrogram Nodes
2015-12-14 desplot Plotting Field Plans for Agricultural Experiments
2015-12-14 effects Effect Displays for Linear, Generalized Linear, and Other Models
2015-12-14 ERP Significance Analysis of Event-Related Potentials Data
2015-12-14 exif Read EXIF Metadata from JPEGs
2015-12-14 gapmap Functions for Drawing Gapped Cluster Heatmap with ggplot2
2015-12-14 gge Genotype Plus Genotype-by-Environment Biplots
2015-12-14 hellno Providing 'stringsAsFactors=FALSE' Variants of 'data.frame()' and 'as.data.frame()'
2015-12-14 hpoPlot Functions for Plotting HPO Terms
2015-12-14 iClick A Button-Based GUI for Financial and Economic Data Analysis
2015-12-14 InterSIM Simulation of Inter-Related Genomic Datasets
2015-12-14 LightningR Tools for Communication with Lightning-Viz Server
2015-12-14 MicroDatosEs Utilities for Official Spanish Microdata
2015-12-14 prepdat Preparing Experimental Data for Statistical Analysis
2015-12-14 RCircos Circos 2D Track Plot
2015-12-14 rTableICC Random Generation of Contingency Tables
2015-12-14 scatterD3 D3 JavaScript Scatterplot from R
2015-12-14 SimCorMultRes Simulates Correlated Multinomial Responses
2015-12-14 snht Standard Normal Homogeneity Test
2015-12-14 ThresholdROC Threshold Estimation
2015-12-14 timeSeries Rmetrics - Financial Time Series Objects
2015-12-14 tnam Temporal Network Autocorrelation Models (TNAM)
2015-12-14 vita Variable Importance Testing Approaches
2015-12-13 arulesViz Visualizing Association Rules and Frequent Itemsets
2015-12-13 cairoDevice Embeddable Cairo Graphics Device Driver
2015-12-13 CITAN CITation ANalysis Toolpack
2015-12-13 pagenum Put Page Numbers on Graphics
2015-12-13 qdapRegex Regular Expression Removal, Extraction, and Replacement Tools
2015-12-13 solarius An R Interface to SOLAR
2015-12-13 strptimer An Easy Interface to Time Formatting
2015-12-13 stubthat Stubbing Framework for R
2015-12-12 ADMMnet Regularized Model with Selecting the Number of Non-Zeros
2015-12-12 Anthropometry Statistical Methods for Anthropometric Data
2015-12-12 bio3d Biological Structure Analysis
2015-12-12 Frames2 Estimation in Dual Frame Surveys
2015-12-12 ggRandomForests Visually Exploring Random Forests
2015-12-12 globals Identify Global Objects in R Expressions
2015-12-12 gtrendsR R Functions to Perform and Display Google Trends Queries
2015-12-12 HLMdiag Diagnostic Tools for Hierarchical (Multilevel) Linear Models
2015-12-12 libamtrack Computational Routines for Proton and Ion Radiotherapy
2015-12-12 mgcv Mixed GAM Computation Vehicle with GCV/AIC/REML Smoothness Estimation
2015-12-12 pbkrtest Parametric Bootstrap and Kenward-Roger-Based Methods for Mixed Model Comparison
2015-12-12 SemiParSampleSel Semiparametric Sample Selection Modelling with Continuous or Discrete Response
2015-12-12 sirad Functions for Calculating Daily Solar Radiation and Evapotranspiration
2015-12-11 AEDForecasting Change Point Analysis in ARIMA Forecasting
2015-12-11 bioinactivation Simulation of Dynamic Microbial Inactivation
2015-12-11 clarifai Access to Clarifai API
2015-12-11 dpcR Digital PCR Analysis
2015-12-11 ecb Programmatic Access to the European Central Bank's Statistical Data Warehouse (SDW)
2015-12-11 pheatmap Pretty Heatmaps
2015-12-11 rbvs Ranking-Based Variable Selection
2015-12-11 rCBA CBA Classifier for R
2015-12-11 repolr Repeated Measures Proportional Odds Logistic Regression
2015-12-11 rnn Recurrent Neural Network
2015-12-11 R.utils Various Programming Utilities
2015-12-11 RXMCDA Functions to Parse and Create XMCDA Files
2015-12-11 SAFD Statistical Analysis of Fuzzy Data
2015-12-11 sdcTable Methods for Statistical Disclosure Control in Tabular Data
2015-12-11 SPmlficmcm Semiparametric Maximum Likelihood Method for Interactions Gene-Environment in Case-Mother Control-Mother Designs
2015-12-11 tmap Thematic Maps
2015-12-11 tolerance Functions for Calculating Tolerance Intervals
2015-12-10 CCMnet Simulate Congruence Class Model for Networks
2015-12-10 Coxnet Regularized Cox Model
2015-12-10 dbmss Distance-Based Measures of Spatial Structures
2015-12-10 fda.usc Functional Data Analysis and Utilities for Statistical Computing
2015-12-10 forestmodel Forest Plots from Regression Models
2015-12-10 git2r Provides Access to Git Repositories
2015-12-10 ibmdbR IBM in-Database Analytics for R
2015-12-10 loo Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian Models
2015-12-10 marmap Import, Plot and Analyze Bathymetric and Topographic Data
2015-12-10 Nippon Japanese Utility Functions and Data
2015-12-10 ordinalNet Penalized Ordinal Regression
2015-12-10 phytools Phylogenetic Tools for Comparative Biology (and Other Things)
2015-12-10 RANKS Ranking of Nodes with Kernelized Score Functions
2015-12-10 rethinker RethinkDB Client
2015-12-10 rscala Bi-Directional Interface Between R and Scala with Callbacks
2015-12-10 simplegraph Simple Graph Data Types and Basic Algorithms
2015-12-10 ssa Simultaneous Signal Analysis
2015-12-10 umx Helper Functions for Structural Equation Modelling in OpenMx
2015-12-10 zoon Reproducible, Accessible & Shareable Species Distribution Modelling
2015-12-09 AnalyzeTS Analyze Time Series
2015-12-09 CorReg Linear Regression Based on Linear Structure Between Covariates
2015-12-09 darch Package for Deep Architectures and Restricted Boltzmann Machines
2015-12-09 DWreg Parametric Regression for Discrete Response
2015-12-09 fheatmap Fantastic Heatmap
2015-12-09 lqr Robust Linear Quantile Regression
2015-12-09 maddison Maddison Project Database
2015-12-09 mcparallelDo A Simplified Interface for Running Commands on Parallel Processes
2015-12-09 mongolite Fast and Simple MongoDB Client for R
2015-12-09 MScombine Combine Data from Positive and Negative Ionization Mode Finding Common Entities
2015-12-09 NetPreProc Network Pre-Processing and Normalization
2015-12-09 orsifronts Southern Ocean Frontal Distributions (Orsi)
2015-12-09 pitchRx Tools for Harnessing 'MLBAM' 'Gameday' Data and Visualizing 'pitchfx'
2015-12-09 relMix Relationship Inference Based on Mixtures
2015-12-09 REndo Fitting Linear Models with Endogenous Regressors when No External Instruments are Available
2015-12-09 riskR Risk Management
2015-12-09 rmdformats HTML Output Formats and Templates for 'rmarkdown' Documents
2015-12-09 rstudioapi Safely Access the RStudio API
2015-12-09 rwfec R Wireless, Forward Error Correction
2015-12-09 sensitivity2x2xk Sensitivity Analysis for 2x2xk Tables in Observational Studies
2015-12-09 SetRank Advanced Gene Set Enrichment Analysis
2015-12-09 svglite A SVG Graphics Device
2015-12-09 webchem Chemical Information from the Web
2015-12-09 wru Who Are You? Bayesian Prediction of Racial Category Using Surname and Geolocation
2015-12-09 xergm.common Common Infrastructure for Extensions of Exponential Random Graph Models
2015-12-08 gkmSVM Gapped-Kmer Support Vector Machine
2015-12-08 jmotif Tools for Time Series Analysis Based on Symbolic Aggregate Dicretization
2015-12-08 mixpack Tools to Work with Mixture Components
2015-12-08 MNS Mixed Neighbourhood Selection
2015-12-08 ncappc NCA Calculation and Population PK Model Diagnosis
2015-12-08 PAGWAS Pathway Analysis Methods for Genomewide Association Data
2015-12-08 randomLCA Random Effects Latent Class Analysis
2015-12-08 RobustAFT Truncated Maximum Likelihood Fit and Robust Accelerated Failure Time Regression for Gaussian and Log-Weibull Case
2015-12-08 snowboot Network Analysis with Non-Parametric Methods that Emerge from Snowball and Bootstrap Sampling
2015-12-08 texreg Conversion of R Regression Output to LaTeX or HTML Tables
2015-12-07 agrmt Calculate Agreement or Consensus in Ordered Rating Scales
2015-12-07 binomen 'Taxonomic' Specification and Parsing Methods
2015-12-07 cranlogs Download Logs from the 'RStudio' 'CRAN' Mirror
2015-12-07 G2Sd Grain-Size Statistics and Description of Sediment
2015-12-07 Kernelheaping Kernel Density Estimation for Heaped and Rounded Data
2015-12-07 Luminescence Comprehensive Luminescence Dating Data Analysis
2015-12-07 MRS Multi-Resolution Scanning for Cross-Sample Differences
2015-12-07 nat.templatebrains NeuroAnatomy Toolbox ('nat') Extension for Handling Template Brains
2015-12-07 ncf Spatial Nonparametric Covariance Functions
2015-12-07 nLTT Calculate the NLTT Statistic
2015-12-07 outbreaker Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
2015-12-07 PIGShift Polygenic Inverse Gamma Shifts
2015-12-07 PortfolioEffectEstim High Frequency Price Estimators by PortfolioEffect
2015-12-07 prettymapr Scale Bar, North Arrow, and Pretty Margins in R
2015-12-07 Rblpapi R Interface to Bloomberg
2015-12-07 rorcid Interface to the 'Orcid.org' 'API'
2015-12-07 rosm Plot Raster Map Tiles from Open Street Map and Other Sources
2015-12-07 RStata A Bit of Glue Between R and Stata
2015-12-07 SemiParBIVProbit Semiparametric Bivariate Regression Models
2015-12-07 TwoStepCLogit Conditional Logistic Regression: A Two-Step Estimation Method
2015-12-07 WriteXLS Cross-Platform Perl Based R Function to Create Excel 2003 (XLS) and Excel 2007 (XLSX) Files
2015-12-07 wtcrsk Competing Risks Regression Models with Covariate-Adjusted Censoring Weights
2015-12-06 abbyyR Access to Abbyy Optical Character Recognition (OCR) API
2015-12-06 adagio Discrete and Global Optimization Routines
2015-12-06 Amelia A Program for Missing Data
2015-12-06 capm Companion Animal Population Management
2015-12-06 caRpools CRISPR AnalyzeR for Pooled CRISPR Screens
2015-12-06 excel.link Convenient Data Exchange with Microsoft Excel
2015-12-06 InformationValue Performance Analysis and Companion Functions for Binary Classification Models
2015-12-06 JacobiEigen Classical Jacobi Eigensolution Algorithm
2015-12-06 jiebaR Chinese Text Segmentation
2015-12-06 mstate Data Preparation, Estimation and Prediction in Multi-State Models
2015-12-06 tablaxlsx Write Formatted Tables in Excel Workbooks
2015-12-05 bayesLife Bayesian Projection of Life Expectancy
2015-12-05 bayesTFR Bayesian Fertility Projection
2015-12-05 connect3 A Tool for Reproducible Research by Converting 'LaTeX' Files Generated by R Sweave to Rich Text Format Files
2015-12-05 CorrMixed Estimate Correlations Between Repeatedly Measured Endpoints (E.g., Reliability) Based on Linear Mixed-Effects Models
2015-12-05 InSilicoVA Probabilistic Verbal Autopsy Coding with InSilicoVA
2015-12-05 llama Leveraging Learning to Automatically Manage Algorithms
2015-12-05 mBvs Multivariate Bayesian Variable Selection Method Exploiting Dependence among Outcomes
2015-12-05 MetaCycle Evaluate Periodicity in Large Scale Data
2015-12-05 omics '–omics' Data Analysis Toolbox
2015-12-05 PrevMap Geostatistical Modelling of Spatially Referenced Prevalence Data
2015-12-05 RedditExtractoR Reddit Data Extraction Toolkit
2015-12-05 sharpshootR A Soil Survey Toolkit
2015-12-05 sleekts 4253H, Twice Smoothing
2015-12-05 soilDB Soil Database Interface
2015-12-04 acp Autoregressive Conditional Poisson
2015-12-04 arulesSequences Mining Frequent Sequences
2015-12-04 GetoptLong Parsing Command-Line Arguments and Variable Interpolation
2015-12-04 hierfstat Estimation and Tests of Hierarchical F-Statistics
2015-12-04 imputeTS Time Series Missing Value Imputation
2015-12-04 mlr Machine Learning in R
2015-12-04 ncdf4 Interface to Unidata netCDF (Version 4 or Earlier) Format Data Files
2015-12-04 npIntFactRep Nonparametric Interaction Tests for Factorial Designs with Repeated Measures
2015-12-04 ordiBreadth Ordinated Diet Breadth
2015-12-04 peakPick Peak Picking Methods Inspired by Biological Data
2015-12-04 phyclust Phylogenetic Clustering (Phyloclustering)
2015-12-04 Rmpfr R MPFR - Multiple Precision Floating-Point Reliable
2015-12-04 SemiCompRisks Hierarchical Models for Parametric and Semi-Parametric Analyses of Semi-Competing Risks Data
2015-12-04 sensR Thurstonian Models for Sensory Discrimination
2015-12-04 SGPdata Exemplar Data Sets for SGP Analyses
2015-12-04 SpatialPosition Spatial Position Models
2015-12-04 tsBSS Tools for Blind Source Separation for Time Series
2015-12-04 unitedR Assessment and Evaluation of Formations in United
2015-12-03 ACDm Tools for Autoregressive Conditional Duration Models
2015-12-03 ADPclust Fast Clustering Using Adaptive Density Peak Detection
2015-12-03 CopulaDTA Copula Based Bivariate Beta-Binomial Model for Diagnostic Test Accuracy Studies
2015-12-03 EpiDynamics Dynamic Models in Epidemiology
2015-12-03 expands Expanding Ploidy and Allele-Frequency on Nested Subpopulations
2015-12-03 FedData Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources
2015-12-03 flowr Streamlining Design and Deployment of Complex Workflows
2015-12-03 formattable Formattable Data Structures
2015-12-03 georob Robust Geostatistical Analysis of Spatial Data
2015-12-03 IntegratedJM Joint Modelling of the Gene-Expression and Bioassay Data, Taking Care of the Effect Due to a Fingerprint Feature
2015-12-03 jaatha Simulation-Based Maximum Likelihood Parameter Estimation
2015-12-03 JRF Joint Random Forest (JRF) for the Simultaneous Estimation of Multiple Related Networks
2015-12-03 lubridate Make Dealing with Dates a Little Easier
2015-12-03 moveHMM Animal Movement Modelling using Hidden Markov Models
2015-12-03 ndtv Network Dynamic Temporal Visualizations
2015-12-03 onewaytests One-Way Independent Groups Design
2015-12-03 pairwise Rasch Model Parameters by Pairwise Algorithm
2015-12-03 paleotree Paleontological and Phylogenetic Analyses of Evolution
2015-12-03 pedometrics Pedometric Tools and Techniques
2015-12-03 ppcor Partial and Semi-Partial (Part) Correlation
2015-12-03 qtl Tools for Analyzing QTL Experiments
2015-12-03 rangemodelR Mid-Domain Effect and Species Richness Estimates
2015-12-03 rFerns Random Ferns Classifier
2015-12-03 RQuantLib R Interface to the 'QuantLib' Library
2015-12-03 rtson Typed JSON
2015-12-03 ryouready Companion to the Forthcoming Book - R you Ready?
2015-12-03 SAGA Software for the Analysis of Genetic Architecture
2015-12-03 sglasso Lasso Method for RCON(V,E) Models
2015-12-03 tggd The Standard Distribution Functions for the Truncated Generalised Gamma Distribution
2015-12-03 TMB Template Model Builder: A General Random Effect Tool Inspired by ADMB
2015-12-02 features Feature Extraction for Discretely-Sampled Functional Data
2015-12-02 funr Simple Utility Providing Terminal Access to all R Functions
2015-12-02 gsl wrapper for the Gnu Scientific Library
2015-12-02 kriens Continuation Passing Style Development
2015-12-02 LW1949 An Automated Approach to Evaluating Dose-Effect Experiments Following Litchfield and Wilcoxon (1949)
2015-12-02 meta General Package for Meta-Analysis
2015-12-02 mixtox Curve Fitting and Mixture Toxicity Assessment
2015-12-02 mma Multiple Mediation Analysis
2015-12-02 MST Multivariate Survival Trees
2015-12-02 OData R Helper for OData Web Services
2015-12-02 paleoTS Analyze Paleontological Time-Series
2015-12-02 params Simplify Parameters
2015-12-02 properties Parse Java Properties Files for R Service Bus Applications
2015-12-02 QCSIS Sure Independence Screening via Quantile Correlation and Composite Quantile Correlation
2015-12-02 RcppCCTZ 'Rcpp' Bindings for the 'CCTZ' Library
2015-12-02 rnoaa 'NOAA' Weather Data from R
2015-12-02 RODBCDBI Provides Access to Databases Through the ODBC Interface
2015-12-02 rvertnet Search 'Vertnet', a 'Database' of Vertebrate Specimen Records
2015-12-02 svdvis Singular Value Decomposition Visualization
2015-12-02 Zelig Everyone's Statistical Software
2015-12-02 ZeligChoice Zelig Choice Models
2015-12-01 AFM Atomic Force Microscope Image Analysis
2015-12-01 EBglmnet Empirical Bayesian Lasso and Elastic Net Methods for Generalized Linear Models
2015-12-01 gmatrix GPU Computing in R
2015-12-01 intsvy International Assessment Data Manager
2015-12-01 lsl Latent Structure Learning
2015-12-01 mda Mixture and Flexible Discriminant Analysis
2015-12-01 MIIVsem Model Implied Instrumental Variable (MIIV) Estimation of Structural Equation Models
2015-12-01 NeuralNetTools Visualization and Analysis Tools for Neural Networks
2015-12-01 OxyBS Processing of Oxy-Bisulfite Microarray Data
2015-12-01 poppr Genetic Analysis of Populations with Mixed Reproduction
2015-12-01 TideTables Tide Analysis and Prediction of Predominantly Semi-Diurnal Tides
2015-12-01 wildpoker Best Hand Analysis for Poker Variants Including Wildcards
2015-11-30 alineR Alignment of Phonetic Sequences Using the 'ALINE' Algorithm
2015-11-30 BEDMatrix Matrices Backed by Binary PED Files (PLINK)
2015-11-30 broom Convert Statistical Analysis Objects into Tidy Data Frames
2015-11-30 carcass Estimation of the Number of Fatalities from Carcass Searches
2015-11-30 causaldrf Tools for Estimating Causal Dose Response Functions
2015-11-30 cplexAPI R Interface to C API of IBM ILOG CPLEX
2015-11-30 dsample Discretization-Based Direct Random Sample Generation
2015-11-30 ezec Easy Interface to Effective Concentration Calculations
2015-11-30 fitdistrplus Help to Fit of a Parametric Distribution to Non-Censored or Censored Data
2015-11-30 gesis R Client for GESIS Data Catalogue (DBK)
2015-11-30 ggfortify Data Visualization Tools for Statistical Analysis Results
2015-11-30 inbreedR Analysing Inbreeding Based on Genetic Markers
2015-11-30 injectoR R Dependency Injection
2015-11-30 latex2exp Use LaTeX Expressions in Plots
2015-11-30 lodGWAS Genome-Wide Association Analysis of a Biomarker Accounting for Limit of Detection
2015-11-30 mdatools Multivariate Data Analysis for Chemometrics
2015-11-30 oaColors OpenAnalytics Colors Package
2015-11-30 oaPlots OpenAnalytics Plots Package
2015-11-30 papeR A Toolbox for Writing Pretty Papers and Reports
2015-11-30 proton The Proton Game
2015-11-30 QCAGUI Modern Functions for Qualitative Comparative Analysis
2015-11-30 quickpsy Fits Psychometric Functions for Multiple Groups
2015-11-30 REPPlab R Interface to 'EPP-Lab', a Java Program for Exploratory Projection Pursuit
2015-11-30 rhandsontable Interface to the 'Handsontable.js' Library
2015-11-30 swirlify A Toolbox for Writing 'swirl' Courses
2015-11-30 taxize Taxonomic Information from Around the Web
2015-11-30 warbleR Streamline Bioacoustic Analysis
2015-11-29 ape Analyses of Phylogenetics and Evolution
2015-11-29 mcemGLM Maximum Likelihood Estimation for Generalized Linear Mixed Models
2015-11-29 RcmdrPlugin.EZR R Commander Plug-in for the EZR (Easy R) Package
2015-11-29 TFMPvalue Efficient and Accurate P-Value Computation for Position Weight Matrices
2015-11-28 ctmm Continuous-Time Movement Modeling
2015-11-28 ELMR Extreme Machine Learning (ELM)
2015-11-28 ICBayes Bayesian Semiparametric Models for Interval-Censored Data
2015-11-28 imPois Imprecise Inferential Framework for Poisson Sampling Model
2015-11-28 jsonlite A Robust, High Performance JSON Parser and Generator for R
2015-11-28 Matrix Sparse and Dense Matrix Classes and Methods
2015-11-28 radiomics Radiomic Image Processing Toolbox
2015-11-28 reda Recurrent Event Data Analysis
2015-11-28 RStoolbox Tools for Remote Sensing Data Analysis
2015-11-27 archivist Tools for Storing, Restoring and Searching for R Objects
2015-11-27 Biocomb Feature Selection and Classification with the Embedded Validation Procedures for Biomedical Data Analysis
2015-11-27 blockcluster Coclustering Package for Binary, Categorical, Contingency and Continuous Data-Sets
2015-11-27 bnlearn Bayesian Network Structure Learning, Parameter Learning and Inference
2015-11-27 DVHmetrics Analyze Dose-Volume Histograms and Check Constraints
2015-11-27 ECOSolveR Embedded Conic Solver in R
2015-11-27 enpls Ensemble Partial Least Squares Regression
2015-11-27 mapmisc Utilities for Producing Maps
2015-11-27 pch Piecewise Constant Hazards Models for Censored and Truncated Data
2015-11-27 Peptides Calculate Indices and Theoretical Properties of Protein Sequences
2015-11-27 pinnacle.API A Wrapper for the Pinnacle Sports API
2015-11-27 pracma Practical Numerical Math Functions
2015-11-26 brotli A Compression Format Optimized for the Web
2015-11-26 flacco Feature-Based Landscape Analysis of Continuous and Constraint Optimization Problems
2015-11-26 GroupTest Multiple Testing Procedure for Grouped Hypotheses
2015-11-26 markovchain Easy Handling Discrete Time Markov Chains
2015-11-26 NEpiC Network Assisted Algorithm for Epigenetic Studies Using Mean and Variance Combined Signals
2015-11-26 nleqslv Solve Systems of Nonlinear Equations
2015-11-26 OneArmPhaseTwoStudy Planing, Monitoring and Evaluating Oncological Phase 2 Studies
2015-11-26 Power2Stage Power and Sample-Size Distribution of 2-Stage Bioequivalence Studies
2015-11-26 rchallenge A Simple Data Science Challenge System
2015-11-26 RJSDMX R Interface to SDMX Web Services
2015-11-26 SocialMediaLab Tools for Collecting Social Media Data and Generating Networks for Analysis
2015-11-26 treeclim Numerical Calibration of Proxy-Climate Relationships
2015-11-25 bvarsv Bayesian Analysis of a Vector Autoregressive Model with Stochastic Volatility and Time-Varying Parameters
2015-11-25 ddR Distributed Data Structures in R
2015-11-25 gdtools Utilities for Graphical Rendering
2015-11-25 microbenchmark Accurate Timing Functions
2015-11-25 MMWRweek Convert Dates to MMWR Day, Week, and Year
2015-11-25 MonetDB.R Connect MonetDB to R
2015-11-25 odds.converter Betting Odds Conversion
2015-11-25 progenyClust Finding the Optimal Cluster Number Using Progeny Clustering
2015-11-25 rattle Graphical User Interface for Data Mining in R
2015-11-25 rgbif Interface to the Global 'Biodiversity' Information Facility 'API'
2015-11-25 rstatscn R Interface for China National Data
2015-11-25 sgPLS Sparse Group Partial Least Square Methods
2015-11-25 TraMineR Trajectory Miner: a Toolbox for Exploring and Rendering Sequences
2015-11-24 ACSNMineR Gene Enrichment Analysis from ACSN Maps or Gmt Files
2015-11-24 apricom Tools for the a Priori Comparison of Regression Modelling Strategies
2015-11-24 BMS Bayesian Model Averaging Library
2015-11-24 clttools Central Limit Theorem Experiments (Theoretical and Simulation)
2015-11-24 cmvnorm The Complex Multivariate Gaussian Distribution
2015-11-24 dprep Data Pre-Processing and Visualization Functions for Classification
2015-11-24 eemR Tools for Pre-Processing Emission-Excitation-Matrix (EEM)
2015-11-24 exams Automatic Generation of Exams in R
2015-11-24 h2o R Interface for H2O
2015-11-24 ipflasso Integrative Lasso with Penalty Factors
2015-11-24 kdecopula Kernel Smoothing for Bivariate Copula Densities
2015-11-24 kofnGA A Genetic Algorithm for Fixed-Size Subset Selection
2015-11-24 letsR Tools for Data Handling and Analysis in Macroecology
2015-11-24 matrixpls Matrix-Based Partial Least Squares Estimation
2015-11-24 meteR Fitting and Plotting Tools for the Maximum Entropy Theory of Ecology (METE)
2015-11-24 minpack.lm R Interface to the Levenberg-Marquardt Nonlinear Least-Squares Algorithm Found in MINPACK, Plus Support for Bounds
2015-11-24 mvabund Statistical Methods for Analysing Multivariate Abundance Data
2015-11-24 netassoc Inference of Species Associations from Co-Occurrence Data
2015-11-24 netgen Network Generator for Combinatorial Graph Problems
2015-11-24 OrdNor Concurrent Generation of Ordinal and Normal Data with Given Correlation Matrix and Marginal Distributions
2015-11-24 pangaear Client for the 'Pangaea' Database
2015-11-24 pbapply Adding Progress Bar to '*apply' Functions
2015-11-24 pgnorm The p-Generalized Normal Distribution
2015-11-24 popprxl Read GenAlEx Files Directly from Excel
2015-11-24 RepeatABEL GWAS for Multiple Observations on Related Individuals
2015-11-24 rtkore STK++ Core Library Integration to R using Rcpp
2015-11-24 smoof Single and Multi-Objective Optimization Test Functions
2015-11-24 sparseLDA Sparse Discriminant Analysis
2015-11-24 UncerIn2 Implements Models of Uncertainty into the Interpolation Functions
2015-11-24 VCA Variance Component Analysis
2015-11-24 XiMpLe A Simple XML Tree Parser and Generator
2015-11-24 yummlyr R Bindings for Yummly API
2015-11-23 AggregateR Aggregate Numeric, Date and Categorical Variables by an ID
2015-11-23 antitrust Tools for Antitrust Practitioners
2015-11-23 blocksdesign Nested Block Designs for Unstructured Treatments
2015-11-23 DESP Estimation of Diagonal Elements of Sparse Precision-Matrices
2015-11-23 Familias Probabilities for Pedigrees Given DNA Data
2015-11-23 flexPM Flexible Parametric Models for Censored and Truncated Data
2015-11-23 ForecastCombinations Forecast Combinations
2015-11-23 kmc Kaplan-Meier Estimator with Constraints for Right Censored Data – a Recursive Computational Algorithm
2015-11-23 pander An R Pandoc Writer
2015-11-23 qut Quantile Universal Threshold
2015-11-23 randomizr Easy to Use Tools for Common Forms of Random Assignment
2015-11-23 RBPcurve The Residual-Based Predictiveness Curve
2015-11-23 resumer Build Resumes with R
2015-11-23 SimSeq Nonparametric Simulation of RNA-Seq Data
2015-11-23 smcfcs Multiple Imputation of Covariates by Substantive Model Compatible Fully Conditional Specification
2015-11-22 ade4 Analysis of Ecological Data : Exploratory and Euclidean Methods in Environmental Sciences
2015-11-22 diffr Display Differences Between Two Files using Codediff Library
2015-11-22 diveRsity A Comprehensive, General Purpose Population Genetics Analysis Package
2015-11-22 labelrank Predicting Rankings of Labels
2015-11-22 lda Collapsed Gibbs Sampling Methods for Topic Models
2015-11-22 mefa4 Multivariate Data Handling with S4 Classes and Sparse Matrices
2015-11-22 miceadds Some Additional Multiple Imputation Functions, Especially for 'mice'
2015-11-22 mpath Regularized Linear Models
2015-11-22 PKNCA Perform Pharmacokinetic Non-Compartmental Analysis
2015-11-22 ResourceSelection Resource Selection (Probability) Functions for Use-Availability Data
2015-11-22 tracheideR Standardize Tracheidograms
2015-11-21 apaTables Create American Psychological Association (APA) Style Tables
2015-11-21 edgar Platform for EDGAR Filing Management
2015-11-21 extracat Categorical Data Analysis and Visualization
2015-11-21 FACTMLE Maximum Likelihood Factor Analysis
2015-11-21 gfcanalysis Tools for Working with Hansen et al. Global Forest Change Dataset
2015-11-21 glcm Calculate Textures from Grey-Level Co-Occurrence Matrices (GLCMs)
2015-11-21 gpuR GPU Functions for R Objects
2015-11-21 scholar Analyse Citation Data from Google Scholar
2015-11-21 sinaplot An Enhanced Chart for Simple and Truthful Representation of Single Observations over Multiple Classes
2015-11-21 spcadjust Functions for Calibrating Control Charts
2015-11-21 subscore SubScore Computing Functions in Classical Test Theory
2015-11-21 Surrogate Evaluation of Surrogate Endpoints in Clinical Trials
2015-11-21 urlshorteneR R Wrapper for the Bit.ly, Goo.gl and Is.gd URL Shortening Services
2015-11-20 bcrm Bayesian Continual Reassessment Method for Phase I Dose-Escalation Trials
2015-11-20 CHNOSZ Chemical Thermodynamics and Activity Diagrams
2015-11-20 curl A Modern and Flexible Web Client for R
2015-11-20 exreport Fast, Reliable and Elegant Reproducible Research
2015-11-20 faoutlier Influential Case Detection Methods for Factor Analysis and Structural Equation Models
2015-11-20 glmmLasso Variable Selection for Generalized Linear Mixed Models by L1-Penalized Estimation
2015-11-20 NAM Nested Association Mapping Analysis
2015-11-20 PRIMsrc PRIM Survival Regression Classification
2015-11-20 rnrfa UK National River Flow Archive Data from R
2015-11-20 RSNPset Efficient Score Statistics for Genome-Wide SNP Set Analysis
2015-11-20 snplist Tools to Create Gene Sets
2015-11-20 teigen Model-Based Clustering and Classification with the Multivariate t Distribution
2015-11-20 TRADER Tree Ring Analysis of Disturbance Events in R
2015-11-20 vegdata Access Vegetation Databases and Treat Taxonomy
2015-11-19 bnclassify Learning Discrete Bayesian Network Classifiers from Data
2015-11-19 bWGR Bagging Whole-Genome Regression
2015-11-19 clustvarsel Variable Selection for Model-Based Clustering
2015-11-19 emil Evaluation of Modeling without Information Leakage
2015-11-19 EnvStats Package for Environmental Statistics, Including US EPA Guidance
2015-11-19 glmx Generalized Linear Models Extended
2015-11-19 Information Data Exploration with Information Theory (Weight-of-Evidence and Information Value)
2015-11-19 MCDM Multi-Criteria Decision Making Methods
2015-11-19 mirt Multidimensional Item Response Theory
2015-11-19 mirtCAT Computerized Adaptive Testing with Multidimensional Item Response Theory
2015-11-19 mixOmics Omics Data Integration Project
2015-11-19 MotilityLab Quantitative Analysis of Motion
2015-11-19 plantecophys Modelling and Analysis of Leaf Gas Exchange Data
2015-11-19 PythonInR Use Python from Within R
2015-11-19 RGraphics Data and Functions from the Book R Graphics, Second Edition
2015-11-19 s4vd Biclustering via Sparse Singular Value Decomposition Incorporating Stability Selection
2015-11-19 SEHmodel Spatial Exposure-Hazard Model for Exposure and Impact Assessment on Exposed Individuals
2015-11-19 timetools Seasonal/Sequential (Instants/Durations, Even or not) Time Series
2015-11-19 YuGene A Simple Approach to Scale Gene Expression Data Derived from Different Platforms for Integrated Analyses
2015-11-18 apaStyle Generate APA Tables for MS Word
2015-11-18 cartography Thematic Cartography
2015-11-18 catenary Fits a Catenary to Given Points
2015-11-18 ConConPiWiFun Optimisation with Continuous Convex Piecewise (Linear and Quadratic) Functions
2015-11-18 ecoretriever R Interface to the EcoData Retriever
2015-11-18 eeptools Convenience Functions for Education Data
2015-11-18 EurosarcBayes Bayesian Single Arm Sample Size Calculation Software
2015-11-18 Fgmutils Forest Growth Model Utilities
2015-11-18 hypervolume High-Dimensional Kernel Density Estimation and Geometry Operations
2015-11-18 JGEE Joint Generalized Estimating Equation Solver
2015-11-18 jvnVaR Value at Risk
2015-11-18 Libra Linearized Bregman Algorithms for Generalized Linear Models
2015-11-18 magclass Data Class and Tools for Handling Spatial-Temporal Data
2015-11-18 MALDIquant Quantitative Analysis of Mass Spectrometry Data
2015-11-18 mplot Graphical Model Stability and Variable Selection Procedures
2015-11-18 msm Multi-State Markov and Hidden Markov Models in Continuous Time
2015-11-18 NanoStringNorm Normalize NanoString miRNA and mRNA Data
2015-11-18 ndl Naive Discriminative Learning
2015-11-18 pAnalysis Benchmarking and Rescaling R2 using Noise Percentile Analysis
2015-11-18 ParamHelpers Helpers for Parameters in Black-Box Optimization, Tuning and Machine Learning
2015-11-18 PSCBS Analysis of Parent-Specific DNA Copy Numbers
2015-11-18 rapport A Report Templating System
2015-11-18 rARPACK Solvers for Large Scale Eigenvalue and SVD Problems
2015-11-18 rSPACE Spatially-Explicit Power Analysis for Conservation and Ecology
2015-11-18 SoyNAM Soybean Nested Association Mapping Dataset
2015-11-18 tnet Software for Analysis of Weighted, Two-Mode, and Longitudinal Networks
2015-11-18 Traitspace A Predictive Model for Trait Based Community Assembly of Plant Species
2015-11-17 BayesBD Bayesian Boundary Detection in Images
2015-11-17 benford.analysis Benford Analysis for Data Validation and Forensic Analytics
2015-11-17 highmean Two-Sample Tests for High-Dimensional Mean Vectors
2015-11-17 linbin Binning and Plotting of Linearly Referenced Data
2015-11-17 mombf Moment and Inverse Moment Bayes Factors
2015-11-17 MvBinary Modelling Multivariate Binary Data with Blocks of Specific One-Factor Distribution
2015-11-17 phylometrics Estimating Statistical Errors of Phylogenetic Metrics
2015-11-17 SparseLearner Sparse Learning Algorithms Using a LASSO-Type Penalty for Coefficient Estimation and Model Prediction
2015-11-17 sybil Efficient Constrained Based Modelling in R
2015-11-17 tikzDevice R Graphics Output in LaTeX Format
2015-11-16 camtrapR Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses
2015-11-16 coin Conditional Inference Procedures in a Permutation Test Framework
2015-11-16 dslice Dynamic Slicing
2015-11-16 edgebundleR Circle Plot with Bundled Edges
2015-11-16 epinet Epidemic/Network-Related Tools
2015-11-16 forestplot Advanced Forest Plot Using 'grid' Graphics
2015-11-16 geoBayes Analysis of Geostatistical Data using Bayes and Empirical Bayes Methods
2015-11-16 gramEvol Grammatical Evolution for R
2015-11-16 gridDebug Debugging 'grid' Graphics
2015-11-16 gridSVG Export 'grid' Graphics as SVG
2015-11-16 highriskzone Determining and Evaluating High-Risk Zones
2015-11-16 Mediana Clinical Trial Simulations
2015-11-16 mixsmsn Fitting Finite Mixture of Scale Mixture of Skew-Normal Distributions
2015-11-16 nCDunnett Noncentral Dunnett's Test Distribution
2015-11-16 npregfast Nonparametric Estimation of Regression Models with Factor-by-Curve Interactions
2015-11-16 PracTools Tools for Designing and Weighting Survey Samples
2015-11-16 prism Access Data from the Oregon State Prism Climate Project
2015-11-16 sodavis SODA: Main and Interaction Effects Selection for Discriminant Analysis and Logistic Regression
2015-11-15 growcurves Bayesian Semi and Nonparametric Growth Curve Models that Additionally Include Multiple Membership Random Effects
2015-11-15 HLSM Hierarchical Latent Space Network Model (HLSM)
2015-11-15 landest Landmark Estimation of Survival and Treatment Effect
2015-11-15 npsurv Non-Parametric Survival Analysis
2015-11-15 RcppAnnoy 'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest Neighbors
2015-11-15 rPython Package Allowing R to Call Python
2015-11-15 RVAideMemoire Diverse Basic Statistical and Graphical Functions
2015-11-15 sms Spatial Microsimulation
2015-11-14 biogas Process Biogas Data and Predict Biogas Production
2015-11-14 brms Bayesian Regression Models using Stan
2015-11-14 kyotil Utility Functions by Youyi, Krisz and Others
2015-11-14 readstata13 Import Stata Data Files
2015-11-14 Tmisc Turner Miscellaneous
2015-11-14 zoib Bayesian Inference for Beta Regression and Zero-or-One Inflated Beta Regression
2015-11-13 DDD Diversity-Dependent Diversification
2015-11-13 egcm Engle-Granger Cointegration Models
2015-11-13 ez Easy Analysis and Visualization of Factorial Experiments
2015-11-13 flexsurv Flexible Parametric Survival and Multi-State Models
2015-11-13 getMet Get Meteorological Data for Hydrological Modeling
2015-11-13 growfunctions Bayesian Non-Parametric Dependent Models for Time-Indexed Functional Data
2015-11-13 listWithDefaults List with Defaults
2015-11-13 Map2NCBI Mapping Markers to the Nearest Genomic Feature
2015-11-13 mvglmmRank Multivariate Generalized Linear Mixed Models for Ranking Sports Teams
2015-11-13 prclust Penalized Regression-Based Clustering Method
2015-11-13 REdaS Companion Package to the Book 'R: Einführung durch angewandte Statistik'
2015-11-13 rsvd Randomized Singular Value Decomposition
2015-11-13 rusda Interface to USDA Databases
2015-11-13 seeclickfixr Access Data from the SeeClickFix Web API
2015-11-13 SNSequate Standard and Nonstandard Statistical Models and Methods for Test Equating
2015-11-13 TopKLists Inference, Aggregation and Visualization for Top-K Ranked Lists
2015-11-12 BAS Bayesian Model Averaging using Bayesian Adaptive Sampling
2015-11-12 blavaan Bayesian Latent Variable Analysis
2015-11-12 brranching Fetch 'Phylogenies' from Many Sources
2015-11-12 cems Conditional Expectation Manifolds
2015-11-12 DirichletReg Dirichlet Regression in R
2015-11-12 eRm Extended Rasch Modeling
2015-11-12 eVenn A Powerful Tool to Quickly Compare Huge Lists and Draw Venn Diagrams
2015-11-12 Fragman Fragment Analysis in R
2015-11-12 franc Detect the Language of Text
2015-11-12 glm.ddR Distributed 'glm' for Big Data using 'ddR' API
2015-11-12 homomorpheR Homomorphic Computations in R
2015-11-12 manifestoR Access and Process Data and Documents of the Manifesto Project
2015-11-12 msr Morse-Smale Approximation, Regression and Visualization
2015-11-12 mvQuad Methods for Multivariate Quadrature
2015-11-12 PerMallows Permutations and Mallows Distributions
2015-11-12 prefmod Utilities to Fit Paired Comparison Models for Preferences
2015-11-12 ptycho Bayesian Variable Selection with Hierarchical Priors
2015-11-12 qtlmt Tools for Mapping Multiple Complex Traits
2015-11-12 QTLRel Tools for Mapping of Quantitative Traits of Genetically Related Individuals and Calculating Identity Coefficients from Pedigrees
2015-11-12 R.cache Fast and Light-Weight Caching (Memoization) of Objects and Results to Speed Up Computations
2015-11-12 rnetcarto Fast Network Modularity and Roles Computation by Simulated Annealing (Rgraph C Library Wrapper for R)
2015-11-12 rtable Tabular Reporting Functions
2015-11-12 shotGroups Analyze Shot Group Data
2015-11-12 smerc Statistical Methods for Regional Counts
2015-11-12 starma Modelling Space Time AutoRegressive Moving Average (STARMA) Processes
2015-11-11 asremlPlus Augments the Use of 'Asreml' in Fitting Mixed Models
2015-11-11 ccaPP (Robust) Canonical Correlation Analysis via Projection Pursuit
2015-11-11 DoseFinding Planning and Analyzing Dose Finding Experiments
2015-11-11 gambin Fit the GamBin Model to Species Abundance Distributions
2015-11-11 gbm2sas Convert GBM Object Trees to SAS Code
2015-11-11 gputools A Few GPU Enabled Functions
2015-11-11 metansue Meta-Analysis of Studies with Non Statistically-Significant Unreported Effects
2015-11-11 MicSim Performing Continuous-Time Microsimulation
2015-11-11 monographaR Taxonomic Monographs Tools
2015-11-11 MTurkR R Client for the MTurk Requester API
2015-11-11 qtpaint Qt-Based Painting Infrastructure
2015-11-11 qwraps2 Quick Wraps 2
2015-11-11 Rcmdr R Commander
2015-11-11 roxygen2 In-Source Documentation for R
2015-11-11 rvest Easily Harvest (Scrape) Web Pages
2015-11-11 sn The Skew-Normal and Skew-t Distributions
2015-11-11 sparkTable Sparklines and Graphical Tables for TeX and HTML
2015-11-11 steadyICA ICA and Tests of Independence via Multivariate Distance Covariance
2015-11-11 tableone Create "Table 1" to Describe Baseline Characteristics
2015-11-11 textreg n-Gram Text Regression, aka Concise Comparative Summarization
2015-11-11 TRD Transmission Ratio Distortion
2015-11-11 Wats Wrap Around Time Series Graphics
2015-11-11 xmeta A Toolbox for Multivariate Meta-Analysis
2015-11-10 adegraphics An S4 Lattice-Based Package for the Representation of Multivariate Data
2015-11-10 BAMMtools Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees
2015-11-10 BIGDAWG Case-Control Analysis of Multi-Allelic Loci
2015-11-10 epandist Statistical Functions for the Censored and Uncensored Epanechnikov Distribution
2015-11-10 FastKM A Fast Multiple-Kernel Method Based on a Low-Rank Approximation
2015-11-10 instaR Access to Instagram API via R
2015-11-10 MASS Support Functions and Datasets for Venables and Ripley's MASS
2015-11-10 nlsem Fitting Structural Equation Mixture Models
2015-11-10 OPI Open Perimetry Interface
2015-11-10 paco Procrustes Application to Cophylogenetic Analysis
2015-11-10 popbio Construction and Analysis of Matrix Population Models
2015-11-10 ranger A Fast Implementation of Random Forests
2015-11-10 rfishbase R Interface to 'FishBase'
2015-11-10 Rlibeemd Ensemble Empirical Mode Decomposition (EEMD) and Its Complete Variant (CEEMDAN)
2015-11-10 SixSigma Six Sigma Tools for Quality Control and Improvement
2015-11-10 specmine Metabolomics and Spectral Data Analysis and Mining
2015-11-10 spTest Nonparametric Hypothesis Tests of Isotropy and Symmetry
2015-11-10 statnet Software Tools for the Statistical Analysis of Network Data
2015-11-10 SuperExactTest Exact Test and Visualization of Multi-Set Intersections
2015-11-10 TruncatedNormal Truncated Multivariate Normal
2015-11-09 ade4TkGUI 'ade4' Tcl/Tk Graphical User Interface
2015-11-09 changepoint Methods for Changepoint Detection
2015-11-09 CovSel Model-Free Covariate Selection
2015-11-09 cp4p Calibration Plot for Proteomics
2015-11-09 diseasemapping Modelling Spatial Variation in Disease Risk for Areal Data
2015-11-09 diverse Diversity Measures for Complex Systems
2015-11-09 fancycut A Fancy Version of 'base::cut'
2015-11-09 fOptions Rmetrics - Pricing and Evaluating Basic Options
2015-11-09 genSurv Generating Multi-State Survival Data
2015-11-09 GEOmap Topographic and Geologic Mapping
2015-11-09 geostatsp Geostatistical Modelling with Likelihood and Bayes
2015-11-09 gvc Global Value Chains Tools
2015-11-09 JM Joint Modeling of Longitudinal and Survival Data
2015-11-09 JMbayes Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach
2015-11-09 lavaan.survey Complex Survey Structural Equation Modeling (SEM)
2015-11-09 maxLik Maximum Likelihood Estimation and Related Tools
2015-11-09 mice Multivariate Imputation by Chained Equations
2015-11-09 mkin Routines for Fitting Kinetic Models with One or More State Variables to Chemical Degradation Data
2015-11-09 qtlcharts Interactive Graphics for QTL Experiments
2015-11-09 queueing Analysis of Queueing Networks and Models
2015-11-09 RSEIS Seismic Time Series Analysis Tools
2015-11-09 smoothHR Smooth Hazard Ratio Curves Taking a Reference Value
2015-11-09 synchronicity Boost Mutex Functionality in R
2015-11-09 TPmsm Estimation of Transition Probabilities in Multistate Models
2015-11-09 tsPI Improved Prediction Intervals for ARIMA Processes and Structural Time Series
2015-11-09 VineCopula Statistical Inference of Vine Copulas
2015-11-09 YPmodel The Short-Term and Long-Term Hazard Ratio Model for Survival Data
2015-11-08 artfima Fit ARTFIMA Model
2015-11-08 BaSTA Age-Specific Survival Analysis from Incomplete Capture-Recapture/Recovery Data
2015-11-08 bigpca PCA, Transpose and Multicore Functionality for 'big.matrix' Objects
2015-11-08 discSurv Discrete Time Survival Analysis
2015-11-08 FatTailsR Kiener Distributions and Fat Tails in Finance
2015-11-08 fcros A Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations
2015-11-08 gSeg Graph-Based Change-Point Detection (g-Segmentation)
2015-11-08 kernDeepStackNet Kernel Deep Stacking Networks
2015-11-07 CUB A Class of Mixture Models for Ordinal Data
2015-11-07 gmnl Multinomial Logit Models with Random Parameters
2015-11-07 lavaan Latent Variable Analysis
2015-11-07 LRcontrast Dose Response Signal Detection under Model Uncertainty
2015-11-07 metafuse Fused Lasso Approach in Regression Coefficient Clustering
2015-11-07 pampe Implementation of the Panel Data Approach Method for Program Evaluation
2015-11-07 personograph Pictographic Representation of Treatment Effects
2015-11-07 phia Post-Hoc Interaction Analysis
2015-11-07 ProTrackR Manipulate and Play 'ProTracker' Modules
2015-11-07 randomForest.ddR Distributed 'randomForest' for Big Data using 'ddR' API
2015-11-07 Rtts Convert Text into Speech
2015-11-07 SPCALDA A New Reduced-Rank Linear Discriminant Analysis Method
2015-11-07 subrank Computes Copula using Ranks and Subsampling
2015-11-06 BayesMAMS Designing Bayesian Multi-Arm Multi-Stage Studies
2015-11-06 BMA Bayesian Model Averaging
2015-11-06 codep Multiscale Codependence Analysis
2015-11-06 easypower Sample Size Estimation for Experimental Designs
2015-11-06 eHOF Extended HOF (Huisman-Olff-Fresco) Models
2015-11-06 gmwm Generalized Method of Wavelet Moments
2015-11-06 Goslate Goslate Interface
2015-11-06 mogavs Multiobjective Genetic Algorithm for Variable Selection in Regression
2015-11-06 osrm Interface Between R and the OpenStreetMap-Based Routing Service OSRM
2015-11-06 RPMG Graphical User Interface (GUI) for Interactive R Analysis Sessions
2015-11-06 rucm Implementation of Unobserved Components Model (UCM)
2015-11-06 RUnit R Unit Test Framework
2015-11-06 seedy Simulation of Evolutionary and Epidemiological Dynamics
2015-11-06 SIS Sure Independence Screening
2015-11-06 surveillance Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena
2015-11-06 textreuse Detect Text Reuse and Document Similarity
2015-11-05 APSIM General Utility Functions for the 'Agricultural Production Systems Simulator'
2015-11-05 dad Three-Way Data Analysis Through Densities
2015-11-05 dglm Double Generalized Linear Models
2015-11-05 EEM Read and Preprocess Fluorescence Excitation-Emission Matrix (EEM) Data
2015-11-05 kmeans.ddR Distributed k-Means for Big Data using 'ddR' API
2015-11-05 LatticeKrig Multiresolution Kriging Based on Markov Random Fields
2015-11-05 LPM Linear Parametric Models Applied to Hydrological Series
2015-11-05 MCDA Functions to Support the Multicriteria Decision Aiding Process
2015-11-05 midrangeMCP Multiples Comparisons Procedures Based on Studentized Midrange and Range Distributions
2015-11-05 packrat A Dependency Management System for Projects and their R Package Dependencies
2015-11-05 party A Laboratory for Recursive Partytioning
2015-11-05 pcnetmeta Patient-Centered Network Meta-Analysis
2015-11-05 rchess Chess Move, Generation/Validation, Piece Placement/ Movement, and Check/Checkmate/Stalemate Detection
2015-11-05 SSDforR Functions to Analyze Single System Data
2015-11-05 statnetWeb A Graphical User Interface for Network Modeling with 'Statnet'
2015-11-05 survJamda Survival Prediction by Joint Analysis of Microarray Gene Expression Data
2015-11-05 tolBasis Fundamental Definitions and Utilities of the Time Oriented Language (TOL)
2015-11-04 BCEE The Bayesian Causal Effect Estimation Algorithm
2015-11-04 BIFIEsurvey Tools for Survey Statistics in Educational Assessment
2015-11-04 CDM Cognitive Diagnosis Modeling
2015-11-04 Deriv Symbolic Differentiation
2015-11-04 gofCopula Goodness-of-Fit Tests for Copulae
2015-11-04 growthcurver Simple Metrics to Summarize Growth Curves
2015-11-04 hermite Generalized Hermite Distribution
2015-11-04 immer Item Response Models for Multiple Ratings
2015-11-04 MAMS Designing Multi-Arm Multi-Stage Studies
2015-11-04 pgirmess Data Analysis in Ecology
2015-11-04 phylin Spatial Interpolation of Genetic Data
2015-11-04 PSAboot Bootstrapping for Propensity Score Analysis
2015-11-04 relen Compute Relative Entropy
2015-11-04 rgeos Interface to Geometry Engine - Open Source (GEOS)
2015-11-04 rorutadis Robust Ordinal Regression UTADIS
2015-11-04 rscopus Scopus Database API Interface
2015-11-04 RSDA R to Symbolic Data Analysis
2015-11-04 SegCorr Detecting Correlated Genomic Regions
2015-11-04 segmented Regression Models with Breakpoints/Changepoints Estimation
2015-11-04 sirt Supplementary Item Response Theory Models
2015-11-04 SOMbrero SOM Bound to Realize Euclidean and Relational Outputs
2015-11-04 spm12r Wrapper Functions for SPM (Statistical Parametric Mapping) Version 12 from the Wellcome Trust Centre for Neuroimaging
2015-11-04 wPerm Permutation Tests
2015-11-03 dae Functions Useful in the Design and ANOVA of Experiments
2015-11-03 DLMtool Data-Limited Methods Toolkit
2015-11-03 epiDisplay Epidemiological Data Display Package
2015-11-03 EpiModel Mathematical Modeling of Infectious Disease
2015-11-03 Langevin Langevin Analysis in One and Two Dimensions
2015-11-03 merror Accuracy and Precision of Measurements
2015-11-03 MM2S Single-Sample Classifier of Medulloblastoma Subtypes for Medulloblastoma Patient Samples, Mouse Models, and Cell Lines
2015-11-03 Phxnlme Run Phoenix NLME and Perform Post-Processing
2015-11-03 pvclass P-Values for Classification
2015-11-03 QuantumClone Clustering Mutations using High Throughput Sequencing (HTS) Data
2015-11-03 quickmapr Quickly Map and Explore Spatial Data
2015-11-03 RRTCS Randomized Response Techniques for Complex Surveys
2015-11-03 sads Maximum Likelihood Models for Species Abundance Distributions
2015-11-03 SALTSampler Efficient Sampling on the Simplex
2015-11-03 sampleSelection Sample Selection Models
2015-11-03 SLOPE Sorted L1 Penalized Estimation (SLOPE)
2015-11-02 epifit Flexible Modelling Functions for Epidemiological Data Analysis
2015-11-02 mvProbit Multivariate Probit Models
2015-11-02 Rcereal C++ Header Files of 'cereal'
2015-11-02 Rcolombos Interface to Colombos Compendia using the Exposed REST API
2015-11-02 RGoogleAnalyticsPremium Unsampled Data in R for Google Analytics Premium Accounts
2015-11-02 treescape Statistical Exploration of Landscapes of Phylogenetic Trees
2015-11-02 xtable Export Tables to LaTeX or HTML
2015-11-01 DataLoader Import Multiple File Types
2015-11-01 MALDIquantForeign Import/Export Routines for MALDIquant
2015-11-01 matchingR Matching Algorithms in R and C++
2015-11-01 NetSwan Network Strengths and Weaknesses Analysis
2015-11-01 nlrr Non-Linear Relative Risk Estimation and Plotting
2015-11-01 PortRisk Portfolio Risk Analysis
2015-11-01 spaMM Mixed Models, Particularly Spatial GLMMs
2015-11-01 SpatPCA Regularized Principal Component Analysis for Spatial Data
2015-11-01 spc Statistical Process Control – Collection of Some Useful Functions
2015-11-01 vipor Plot Categorical Data Using Quasirandom Noise and Density Estimates
2015-10-31 AHR Estimation and Testing of Average Hazard Ratios
2015-10-31 AlgebraicHaploPackage Haplotype Two Snips Out of a Paired Group of Patients
2015-10-31 cometExactTest Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm
2015-10-31 compound.Cox Regression Estimation Based on the Compound Covariate Method Under the Cox Proportional Hazard Model
2015-10-31 corkscrew Preprocessor for Data Modeling
2015-10-31 cshapes CShapes Dataset and Utilities
2015-10-31 CUSUMdesign Compute Decision Interval and Average Run Length for CUSUM Charts
2015-10-31 dendextend Extending R's Dendrogram Functionality
2015-10-31 DynNom Dynamic Nomograms for Linear, Generalized Linear and Proportional Hazard Models
2015-10-31 kedd Kernel Estimator and Bandwidth Selection for Density and Its Derivatives
2015-10-31 LaplaceDeconv Laplace Deconvolution with Noisy Discrete Non-Equally Spaced Observations on a Finite Time Interval
2015-10-31 metaSEM Meta-Analysis using Structural Equation Modeling
2015-10-31 mlma Multilevel Mediation Analysis
2015-10-31 reReg Recurrent Event Regression
2015-10-31 rGroovy Groovy Language Integration
2015-10-31 RViennaCL ViennaCL C++ Header Files
2015-10-31 smss Datasets for Agresti and Finlay's "Statistical Methods for the Social Sciences"
2015-10-31 snow Simple Network of Workstations
2015-10-31 TSTr Ternary Search Tree for Auto-Completion and Spell Checking
2015-10-31 vmsbase GUI Tools to Process, Analyze and Plot Fisheries Data
2015-10-31 wordbankr Accessing the Wordbank Database
2015-10-30 showtext Using Fonts More Easily in R Graphs
2015-10-30 spatialEco Spatial Analysis and Modelling
2015-10-29 Canopy Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing
2015-10-29 CDVine Statistical Inference of C- And D-Vine Copulas
2015-10-29 ecospace Simulating Community Assembly and Ecological Diversification Using Ecospace Frameworks
2015-10-29 littler R at the Command-Line via 'r'
2015-10-29 onlinePCA Online Principal Component Analysis
2015-10-29 RNaviCell Visualization of High-Throughput Data on Large-Scale Biological Networks
2015-10-29 spam SPArse Matrix
2015-10-29 vegan3d Static and Dynamic 3D Plots for the 'vegan' Package
2015-10-29 VGAM Vector Generalized Linear and Additive Models
2015-10-29 VGAMdata Data Supporting the 'VGAM' Package
2015-10-28 aroma.cn Copy-Number Analysis of Large Microarray Data Sets
2015-10-28 bcRep Advanced Analysis of B Cell Receptor Repertoire Data
2015-10-28 chebpol Multivariate Chebyshev Interpolation
2015-10-28 ClueR CLUster Evaluation (CLUE)
2015-10-28 cts Continuous Time Autoregressive Models
2015-10-28 dina Bayesian Estimation of DINA Model
2015-10-28 distcomp Computations over Distributed Data without Aggregation
2015-10-28 gitlabr Access to the Gitlab API
2015-10-28 knitcitations Citations for 'Knitr' Markdown Files
2015-10-28 lmmot Multiple Ordinal Tobit (MOT) Model
2015-10-28 lucr Currency Formatting and Conversion
2015-10-28 MCMC.qpcr Bayesian Analysis of qRT-PCR Data
2015-10-28 multicool Permutations of Multisets in Cool-Lex Order
2015-10-28 multiwave Estimation of Multivariate Long-Memory Models Parameters
2015-10-28 piecewiseSEM Piecewise Structural Equation Modeling
2015-10-28 purge Purge Training Data from Models
2015-10-28 rankhazard Rank-Hazard Plots
2015-10-28 RESS Integrates R and Essentia
2015-10-28 rPref Database Preferences and Skyline Computation
2015-10-28 rrBLUP Ridge Regression and Other Kernels for Genomic Selection
2015-10-28 stream Infrastructure for Data Stream Mining
2015-10-28 TESS Diversification Rate Estimation and Fast Simulation of Reconstructed Phylogenetic Trees under Tree-Wide Time-Heterogeneous Birth-Death Processes Including Mass-Extinction Events
2015-10-28 WiSEBoot Wild Scale-Enhanced Bootstrap
2015-10-27 ACNE Affymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization
2015-10-27 calmate Improved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation
2015-10-27 geomorph Geometric Morphometric Analyses of 2D/3D Landmark Data
2015-10-27 gimme Group Iterative Multiple Model Estimation
2015-10-27 jug Create a Simple Web API for your R Functions
2015-10-27 mclust Normal Mixture Modelling for Model-Based Clustering, Classification, and Density Estimation
2015-10-27 ncvreg Regularization Paths for SCAD and MCP Penalized Regression Models
2015-10-27 orsk Converting Odds Ratio to Relative Risk in Cohort Studies with Partial Data Information
2015-10-27 OrthoPanels Dynamic Panel Models with Orthogonal Reparameterization of Fixed Effects
2015-10-27 RMySQL Database Interface and 'MySQL' Driver for R
2015-10-27 rpivotTable Build Powerful Pivot Tables and Dynamically Slice & Dice your Data
2015-10-27 settings Software Option Settings Manager for R
2015-10-27 spatgraphs Graph Edge Computations for Spatial Point Patterns
2015-10-27 spduration Split-Population Duration (Cure) Regression
2015-10-27 webutils Utility Functions for Web Applications
2015-10-26 batman Convert Categorical Representations of Logicals to Actual Logicals
2015-10-26 copula Multivariate Dependence with Copulas
2015-10-26 feature Local Inferential Feature Significance for Multivariate Kernel Density Estimation
2015-10-26 lfe Linear Group Fixed Effects
2015-10-26 nodiv Compares the Distribution of Sister Clades Through a Phylogeny
2015-10-26 phylosignal Exploring the Phylogenetic Signal in Continuous Traits
2015-10-26 reutils Talk to the NCBI EUtils
2015-10-26 RForcecom Data Integration Feature for Force.com and Salesforce.com
2015-10-26 spsann Optimization of Sample Configurations using Spatial Simulated Annealing
2015-10-26 TDCor Gene Network Inference from Time-Series Transcriptomic Data
2015-10-26 ukgasapi API for UK Gas Market Information
2015-10-25 afex Analysis of Factorial Experiments
2015-10-25 bayou Bayesian Fitting of Ornstein-Uhlenbeck Models to Phylogenies
2015-10-25 DescTools Tools for Descriptive Statistics
2015-10-25 FastGP Efficiently Using Gaussian Processes with Rcpp and RcppEigen
2015-10-25 geeM Solve Generalized Estimating Equations
2015-10-25 MixedTS Mixed Tempered Stable Distribution
2015-10-25 MPCI Multivariate Process Capability Indices (MPCI)
2015-10-25 tergm Fit, Simulate and Diagnose Models for Network Evolution Based on Exponential-Family Random Graph Models
2015-10-24 AdapEnetClass A Class of Adaptive Elastic Net Methods for Censored Data
2015-10-24 CoxPlus Cox Regression (Proportional Hazards Model) with Multiple Causes and Mixed Effects
2015-10-24 data.tree General Purpose Hierarchical Data Structure
2015-10-24 enRich An R Package for the Analysis of Multiple ChIP-Seq Data
2015-10-24 ergm Fit, Simulate and Diagnose Exponential-Family Models for Networks
2015-10-24 jackknifeKME Jackknife Estimates of Kaplan-Meier Estimators or Integrals
2015-10-24 LDAvis Interactive Visualization of Topic Models
2015-10-24 PanelCount Random Effects and/or Sample Selection Models for Panel Count Data
2015-10-24 rfoaas R Interface to FOAAS
2015-10-24 statnet.common Common R Scripts and Utilities Used by the Statnet Project Software
2015-10-23 ameco European Commission Annual Macro-Economic (AMECO) Database
2015-10-23 checkmate Fast and Versatile Argument Checks
2015-10-23 copulaedas Estimation of Distribution Algorithms Based on Copulas
2015-10-23 DEoptimR Differential Evolution Optimization in Pure R
2015-10-23 hotspot Software Hotspot Analysis
2015-10-23 imputeYn Imputing the Last Largest Censored Observation(s) Under Weighted Least Squares
2015-10-23 inegiR Integrate INEGI’s (Mexican Stats Office) API with R
2015-10-23 joint.Cox Penalized Likelihood Estimation and Prediction under the Joint Cox Models Between Tumour Progression and Death for Meta-Analysis
2015-10-23 ks Kernel Smoothing
2015-10-23 mhde Minimum Hellinger Distance Test for Normality
2015-10-23 poisson Simulating Homogenous & Non-Homogenous Poisson Processes
2015-10-23 pvclust Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling
2015-10-23 qlcVisualize Visualization for Quantitative Language Comparison (QLC)
2015-10-23 QPot Quasi-Potential Analysis for Stochastic Differential Equations
2015-10-23 RClone Partially Clonal Populations Analysis
2015-10-23 Rsurrogate Robust Estimation of the Proportion of Treatment Effect Explained by Surrogate Marker Information
2015-10-23 Sequential Exact Sequential Analysis for Poisson and Binomial Data
2015-10-23 Shrinkage Several Shrinkage Effect-Size Estimators
2015-10-23 SpecsVerification Forecast Verification Routines for the SPECS FP7 Project
2015-10-23 spsurvey Spatial Survey Design and Analysis
2015-10-22 bigtabulate Table, Apply, and Split Functionality for Matrix and 'big.matrix' Objects
2015-10-22 ckanr Client for the Comprehensive Knowledge Archive Network ('CKAN') 'API'
2015-10-22 coneproj Primal or Dual Cone Projections with Routines for Constrained Regression
2015-10-22 dgmb Simulating Data for PLS Mode B Structural Models
2015-10-22 FSAdata Data to Support Fish Stock Assessment (FSA) Package
2015-10-22 HotDeckImputation Hot Deck Imputation Methods for Missing Data
2015-10-22 icamix Estimation of ICA Mixture Models
2015-10-22 LinkedMatrix Column-Linked and Row-Linked Matrices
2015-10-22 MixSim Simulating Data to Study Performance of Clustering Algorithms
2015-10-22 Perc Using Percolation and Conductance to Find Information Flow Certainty in a Direct Network
2015-10-22 ProNet Biological Network Construction, Visualization and Analyses
2015-10-22 radir Inverse-Regression Estimation of Radioactive Doses
2015-10-22 readr Read Tabular Data
2015-10-22 rqPen Penalized Quantile Regression
2015-10-22 seqminer Efficiently Read Sequence Data (VCF Format, BCF Format and METAL Format) into R
2015-10-22 ssym Fitting Semi-Parametric log-Symmetric Regression Models
2015-10-22 stationaRy Get Hourly Meteorological Data from Global Stations
2015-10-22 stringi Character String Processing Facilities
2015-10-22 TCGA2STAT Simple TCGA Data Access for Integrated Statistical Analysis in R
2015-10-22 transport Optimal Transport in Various Forms
2015-10-22 uptimeRobot Access the UptimeRobot Ping API
2015-10-22 weightedScores Weighted Scores Method for Regression Models with Dependent Data
2015-10-22 wellknown Convert Between 'WKT' and 'GeoJSON'
2015-10-21 backpipe Backward Pipe Operator
2015-10-21 backtestGraphics Interactive Graphics for Portfolio Data
2015-10-21 biganalytics Utilities for 'big.matrix' Objects from Package 'bigmemory'
2015-10-21 fanovaGraph Building Kriging Models from FANOVA Graphs
2015-10-21 fat2Lpoly Two-Locus Family-Based Association Test with Polytomic Outcome
2015-10-21 fslr Wrapper Functions for FSL (FMRIB Software Library) from Functional MRI of the Brain (FMRIB)
2015-10-21 matlabr An Interface for MATLAB using System Calls
2015-10-21 multimark Capture-Mark-Recapture Analysis using Multiple Non-Invasive Marks
2015-10-21 MultiRR Bias, Precision, and Power for Multi-Level Random Regressions
2015-10-21 NPC Nonparametric Combination of Hypothesis Tests
2015-10-21 qlcData Processing Data for Quantitative Language Comparison (QLC)
2015-10-21 rPlant Interface to the Agave API
2015-10-21 RxODE Facilities for Simulating from ODE-Based Models
2015-10-21 spatsurv Bayesian Spatial Survival Analysis with Parametric Proportional Hazards Models
2015-10-20 Barnard Barnard's Unconditional Test
2015-10-20 bigmemory Manage Massive Matrices with Shared Memory and Memory-Mapped Files
2015-10-20 crank Completing Ranks
2015-10-20 eventInterval Sequential Event Interval Analysis
2015-10-20 flowDiv Cytometric Diversity Indices from 'FlowJo' Workspaces
2015-10-20 forecast Forecasting Functions for Time Series and Linear Models
2015-10-20 GSSE Genotype-Specific Survival Estimation
2015-10-20 httpcode 'HTTP' Status Code Helper
2015-10-20 MAINT.Data Model and Analyse Interval Data
2015-10-20 NMOF Numerical Methods and Optimization in Finance
2015-10-20 prettyR Pretty Descriptive Stats
2015-10-20 quantspec Quantile-Based Spectral Analysis of Time Series
2015-10-19 clinsig Clinical Significance Functions
2015-10-19 crop Graphics Cropping Tool
2015-10-19 diezeit R Interface to the ZEIT ONLINE Content API
2015-10-19 EMCluster EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution
2015-10-19 HiDimDA High Dimensional Discriminant Analysis
2015-10-19 ibr Iterative Bias Reduction
2015-10-19 ksrlive Identify Kinase Substrate Relationships Using Dynamic Data
2015-10-19 mbest Moment-Based Estimation for Hierarchical Models
2015-10-19 mitml Tools for Multiple Imputation in Multilevel Modeling
2015-10-19 MonoPhy Allows to Explore Monophyly (or Lack of it) of Taxonomic Groups in a Phylogeny
2015-10-19 optCluster Determine Optimal Clustering Algorithm and Number of Clusters
2015-10-19 rAmCharts JavaScript Charts API Tool
2015-10-19 RcmdrPlugin.Export Export R Output to LaTeX or HTML
2015-10-19 SciencesPo A Tool Set for Analyzing Political Behavior Data
2015-10-19 seacarb Seawater Carbonate Chemistry
2015-10-19 simest Constrained Single Index Model Estimation
2015-10-19 SimHaz Simulated Survival and Hazard Analysis for Time-Dependent Exposure
2015-10-19 spartan Simulation Parameter Analysis R Toolkit ApplicatioN: Spartan
2015-10-19 TIMP Fitting Separable Nonlinear Models in Spectroscopy and Microscopy
2015-10-18 biorxivr Search and Download Papers from the bioRxiv Preprint Server
2015-10-18 CMplot Circle Manhattan Plot
2015-10-18 cocor Comparing Correlations
2015-10-18 complmrob Robust Linear Regression with Compositional Data as Covariates
2015-10-18 DiscreteWeibull Discrete Weibull Distributions (Type 1 and 3)
2015-10-18 EffectLiteR Average and Conditional Effects
2015-10-18 FastRCS Fits the FastRCS Robust Multivariable Linear Regression Model
2015-10-18 FeatureHashing Creates a Model Matrix via Feature Hashing with a Formula Interface
2015-10-18 GrapheR A Multi-Platform GUI for Drawing Customizable Graphs in R
2015-10-18 gstat Spatial and Spatio-Temporal Geostatistical Modelling, Prediction and Simulation
2015-10-18 hydrostats Hydrologic Indices for Daily Time Series Data
2015-10-18 ifaTools Toolkit for Item Factor Analysis with OpenMx
2015-10-18 rwirelesscom Basic Wireless Communications Simulation
2015-10-18 sodium A Modern and Easy-to-Use Crypto Library
2015-10-18 sp Classes and Methods for Spatial Data
2015-10-18 speciesgeocodeR Prepare Species Distributions for the Use in Phylogenetic Analyses
2015-10-18 V8 Embedded JavaScript Engine
2015-10-18 wle Weighted Likelihood Estimation
2015-10-18 xoi Tools for Analyzing Crossover Interference
2015-10-17 BcDiag Diagnostics Plots for Bicluster Data
2015-10-16 capushe CAlibrating Penalities Using Slope HEuristics
2015-10-16 CHsharp Choi and Hall Style Data Sharpening
2015-10-16 cnmlcd Maximum Likelihood Estimation of a Log-Concave Density Function
2015-10-16 coda Output Analysis and Diagnostics for MCMC
2015-10-16 ezsummary Summarise Data in the Quick and Easy Way
2015-10-16 HistData Data Sets from the History of Statistics and Data Visualization
2015-10-16 idendr0 Interactive Dendrograms
2015-10-16 keyplayer Locating Key Players in Social Networks
2015-10-16 mnlogit Multinomial Logit Model
2015-10-16 Pasha Preprocessing of Aligned Sequences from HTS Analyses
2015-10-16 rivr Steady and Unsteady Open-Channel Flow Computation
2015-10-16 RNiftyReg Image Registration Using the NiftyReg Library
2015-10-16 survsim Simulation of Simple and Complex Survival Data
2015-10-15 easyVerification Ensemble Forecast Verification for Large Datasets
2015-10-15 hamlet Hierarchical Optimal Matching and Machine Learning Toolbox
2015-10-15 pixiedust Tables so Beautifully Fine-Tuned You Will Believe It's Magic
2015-10-15 rags2ridges Ridge Estimation of Precision Matrices from High-Dimensional Data
2015-10-15 VSURF Variable Selection Using Random Forests
2015-10-15 wpp2015 World Population Prospects 2015
2015-10-14 adabag Applies Multiclass AdaBoost.M1, SAMME and Bagging
2015-10-14 AdaptGauss Gaussian Mixture Models (GMM)
2015-10-14 Blossom Statistical Comparisons with Distance-Function Based Permutation Tests
2015-10-14 ClusterStability Assessment of Stability of Individual Objects or Clusters in Partitioning Solutions
2015-10-14 covBM Brownian Motion Processes for 'nlme'-Models
2015-10-14 ctmcmove Modeling Animal Movement with Continuous-Time Discrete-Space Markov Chains
2015-10-14 DIFtree Item Focused Trees for the Identification of Items in Differential Item Functioning
2015-10-14 docopulae Optimal Designs for Copula Models
2015-10-14 doParallel Foreach Parallel Adaptor for the 'parallel' Package
2015-10-14 doSNOW Foreach Parallel Adaptor for the 'snow' Package
2015-10-14 downscale Downscaling Species Occupancy
2015-10-14 ecotoxicology Methods for Ecotoxicology
2015-10-14 GeneticSubsetter Identify Favorable Subsets of Germplasm Collections
2015-10-14 httk High-Throughput Toxicokinetics
2015-10-14 LGEWIS Tests for Genetic Association/Gene-Environment Interaction in Longitudinal Gene-Environment-Wide Interaction Studies
2015-10-14 ReliabilityTheory Tools for Structural Reliability Analysis
2015-10-14 reportr A General Message and Error Reporting System
2015-10-14 snowfall Easier cluster computing (based on snow)
2015-10-14 testthat Unit Testing for R
2015-10-14 TLBC Two-Level Behavior Classification
2015-10-14 treebase Discovery, Access and Manipulation of 'TreeBASE' Phylogenies
2015-10-14 treemap Treemap Visualization
2015-10-13 ANOM Analysis of Means
2015-10-13 backShift Learning Causal Cyclic Graphs from Unknown Shift Interventions
2015-10-13 birdring Methods to Analyse Ring Re-Encounter Data
2015-10-13 corregp Functions and Methods for Correspondence Regression
2015-10-13 cowsay Messages, Warnings, Strings with Ascii Animals
2015-10-13 DiagrammeR Create Graph Diagrams and Flowcharts Using R
2015-10-13 DiffusionRgqd Inference and Analysis for Generalized Quadratic Diffusions
2015-10-13 doMC Foreach Parallel Adaptor for 'parallel'
2015-10-13 FCGR Fatigue Crack Growth in Reliability
2015-10-13 foreach Provides Foreach Looping Construct for R
2015-10-13 h5 Interface to the 'HDF5' Library
2015-10-13 iterators Provides Iterator Construct for R
2015-10-13 lift Compute the Top Decile Lift and Plot the Lift Curve
2015-10-13 nlnet Nonlinear Network Reconstruction and Clustering Based on DCOL (Distance Based on Conditional Ordered List)
2015-10-13 StMoMo Stochastic Mortality Modelling
2015-10-13 SyncMove Subsample Temporal Data to Synchronal Events and Compute the MCI
2015-10-13 wingui Advanced Windows Functions
2015-10-12 apsimr Edit, Run and Evaluate APSIM Simulations Easily Using R
2015-10-12 BANFF Bayesian Network Feature Finder
2015-10-12 chunked Chunkwise Text-File Processing for 'dplyr'
2015-10-12 COMMUNAL Robust Selection of Cluster Number K
2015-10-12 compendiumdb Tools for Retrieval and Storage of Functional Genomics Data
2015-10-12 deformula Integration of One-Dimensional Functions with Double Exponential Formulas
2015-10-12 EloChoice Preference Rating for Visual Stimuli Based on Elo Ratings
2015-10-12 fbroc Fast Algorithms to Bootstrap Receiver Operating Characteristics Curves
2015-10-12 geesmv Modified Variance Estimators for Generalized Estimating Equations
2015-10-12 gemtc Network Meta-Analysis Using Bayesian Methods
2015-10-12 HAC Estimation, Simulation and Visualization of Hierarchical Archimedean Copulae (HAC)
2015-10-12 HydeNet Hybrid Bayesian Networks Using R and JAGS
2015-10-12 maGUI A Graphical User Interface for Microarray Data Analysis
2015-10-12 rgeolocate IP Address Geolocation
2015-10-12 rpnf Point and Figure Package
2015-10-12 sjPlot Data Visualization for Statistics in Social Science
2015-10-12 subspace Interface to OpenSubspace
2015-10-11 aoos Another Object Orientation System
2015-10-11 berryFunctions Function Collection Related to Plotting and Hydrology
2015-10-11 gitter Quantification of Pinned Microbial Cultures
2015-10-11 irlba Fast Truncated SVD, PCA and Symmetric Eigendecomposition for Large Dense and Sparse Matrices
2015-10-11 liftr Dockerize R Markdown Documents
2015-10-11 matchingMarkets Analysis of Stable Matchings
2015-10-11 MVT Estimation and Testing for the Multivariate t-Distribution
2015-10-11 NonpModelCheck Model Checking and Variable Selection in Nonparametric Regression
2015-10-11 relations Data Structures and Algorithms for Relations
2015-10-11 sets Sets, Generalized Sets, Customizable Sets and Intervals
2015-10-11 tigris Load Census TIGER/Line Shapefiles into R
2015-10-11 urltools Vectorised Tools for URL Handling and Parsing
2015-10-10 aprof Amdahl's Profiler, Directed Optimization Made Easy
2015-10-10 dtwSat Time-Weighted Dynamic Time Warping for Remote Sensing Time Series Analysis
2015-10-10 fishmethods Fishery Science Methods and Models in R
2015-10-10 gdalUtils Wrappers for the Geospatial Data Abstraction Library (GDAL) Utilities
2015-10-10 HDGLM Tests for High Dimensional Generalized Linear Models
2015-10-10 NCA Necessary Condition Analysis
2015-10-10 pedgene Gene-Level Statistics for Pedigree Data
2015-10-10 sequenza Copy Number Estimation from Tumor Genome Sequencing Data
2015-10-10 sisal Sequential Input Selection Algorithm
2015-10-10 wsrf Weighted Subspace Random Forest for Classification
2015-10-09 FIACH Retrospective Noise Control for fMRI
2015-10-09 OpenStreetMap Access to Open Street Map Raster Images
2015-10-09 optigrab Command-Line Parsing for an R World
2015-10-09 qdap Bridging the Gap Between Qualitative Data and Quantitative Analysis
2015-10-09 qlcMatrix Utility Sparse Matrix Functions for Quantitative Language Comparison
2015-10-09 TauStar Efficient Computation of the t* Statistic of Bergsma and Dassios (2014)
2015-10-09 water Actual Evapotranspiration with Energy Balance Models
2015-10-08 assertive Readable Check Functions to Ensure Code Integrity
2015-10-08 assertive.base A Lightweight Core of the 'assertive' Package
2015-10-08 chemCal Calibration Functions for Analytical Chemistry
2015-10-08 clere Simultaneous Variables Clustering and Regression
2015-10-08 fastdigest Fast, Low Memory-Footprint Digests of R Objects
2015-10-08 ITEMAN Classical Item Analysis
2015-10-08 luzlogr Lightweight Logging for R Scripts
2015-10-08 pathological Path Manipulation Utilities
2015-10-08 rtimes Client for New York Times 'APIs'
2015-10-08 seasonal R Interface to X-13-ARIMA-SEATS
2015-10-08 SurvRegCensCov Weibull Regression for a Right-Censored Endpoint with Interval-Censored Covariate
2015-10-07 CompareCausalNetworks Interface to Diverse Estimation Methods of Causal Networks
2015-10-07 drfit Dose-Response Data Evaluation
2015-10-07 EBEN Empirical Bayesian Elastic Net
2015-10-07 expm Matrix Exponential
2015-10-07 fanplot Visualisation of Sequential Probability Distributions Using Fan Charts
2015-10-07 InvariantCausalPrediction Invariant Causal Prediction
2015-10-07 lsei Solving Least Squares Problems under Equality/Inequality Constraints
2015-10-07 MultNonParam Multivariate Nonparametric Methods
2015-10-07 OpenMx Extended Structural Equation Modelling
2015-10-07 PolyPatEx Paternity Exclusion in Autopolyploid Species
2015-10-07 randomForest Breiman and Cutler's Random Forests for Classification and Regression
2015-10-07 rsm Response-Surface Analysis
2015-10-07 SWMPr Retrieving, Organizing, and Analyzing Estuary Monitoring Data
2015-10-07 vines Multivariate Dependence Modeling with Vines
2015-10-06 agricolae Statistical Procedures for Agricultural Research
2015-10-06 assertive.code Assertions to Check Properties of Code
2015-10-06 assertive.data Assertions to Check Properties of Data
2015-10-06 assertive.data.uk Assertions to Check Properties of Strings
2015-10-06 assertive.data.us Assertions to Check Properties of Strings
2015-10-06 assertive.datetimes Assertions to Check Properties of Dates and Times
2015-10-06 assertive.files Assertions to Check Properties of Files
2015-10-06 assertive.matrices Assertions to Check Properties of Matrices
2015-10-06 assertive.models Assertions to Check Properties of Models
2015-10-06 assertive.numbers Assertions to Check Properties of Numbers
2015-10-06 assertive.properties Assertions to Check Properties of Variables
2015-10-06 assertive.reflection Assertions for Checking the State of R
2015-10-06 assertive.sets Assertions to Check Properties of Sets
2015-10-06 assertive.strings Assertions to Check Properties of Strings
2015-10-06 assertive.types Assertions to Check Types of Variables
2015-10-06 CEGO Combinatorial Efficient Global Optimization
2015-10-06 clipr Read and Write from the System Clipboard
2015-10-06 elasso Enhanced Least Absolute Shrinkage and Selection Operator Regression Model
2015-10-06 flows Flow Selection and Analysis
2015-10-06 jrvFinance Basic Finance; NPV/IRR/Annuities/Bond-Pricing; Black Scholes
2015-10-06 LANDD Liquid Association for Network Dynamics Detection
2015-10-06 lme4 Linear Mixed-Effects Models using 'Eigen' and S4
2015-10-06 MFAg Multiple Factor Analysis (MFA)
2015-10-06 migest Methods for the Indirect Estimation of Bilateral Migration
2015-10-06 MVar.pt Analise multivariada (brazilian portuguese)
2015-10-06 RcppOctave Seamless Interface to Octave – And Matlab
2015-10-06 RFormatter R Source Code Formatter
2015-10-06 Rmixmod An Interface for MIXMOD
2015-10-06 rsdmx Tools for Reading SDMX Data and Metadata
2015-10-06 synbreed Framework for the Analysis of Genomic Prediction Data using R
2015-10-05 alleHap Allele Imputation and Haplotype Reconstruction from Pedigree Databases
2015-10-05 cate High Dimensional Factor Analysis and Confounder Adjusted Testing and Estimation
2015-10-05 conicfit Algorithms for Fitting Circles, Ellipses and Conics Based on the Work by Prof. Nikolai Chernov
2015-10-05 dfcomb Phase I/II Adaptive Dose-Finding Design for Combination Studies
2015-10-05 dfmta Phase I/II Adaptive Dose-Finding Design for MTA
2015-10-05 diagonals Block Diagonal Extraction or Replacement
2015-10-05 episensr Basic Sensitivity Analysis of Epidemiological Results
2015-10-05 geofd Spatial Prediction for Function Value Data
2015-10-05 HiCfeat Multiple Logistic Regression for 3D Chromatin Domain Border Analysis
2015-10-05 logisticPCA Binary Dimensionality Reduction
2015-10-05 mev Multivariate Extreme Value Distributions
2015-10-05 pec Prediction Error Curves for Risk Prediction Models in Survival Analysis
2015-10-05 PsiHat Several Local False Discovery Rate Estimators
2015-10-05 qap Heuristics for the Quadratic Assignment Problem (QAP)
2015-10-05 RcppRedis 'Rcpp' Bindings for 'Redis' using the 'hiredis' Library
2015-10-05 riskRegression Risk Regression Models for Survival Analysis with Competing Risks
2015-10-05 rootSolve Nonlinear Root Finding, Equilibrium and Steady-State Analysis of Ordinary Differential Equations
2015-10-05 smallarea Fits a Fay Herriot Model
2015-10-05 TreeSim Simulating Phylogenetic Trees
2015-10-05 wqs Weighted Quantile Sum Regression
2015-10-05 WRS2 A Collection of Robust Statistical Methods
2015-10-04 geoknife Web-Processing of Large Gridded Datasets
2015-10-04 gmum.r GMUM Machine Learning Group Package
2015-10-04 ManlyMix Manly Mixture Modeling and Model-Based Clustering
2015-10-04 plotSEMM Graphing Nonlinear Relations Among Latent Variables from Structural Equation Mixture Models
2015-10-03 FENmlm Fixed Effects Nonlinear Maximum Likelihood Models
2015-10-03 glarma Generalized Linear Autoregressive Moving Average Models
2015-10-03 MetaPath Perform the Meta-Analysis for Pathway Enrichment Analysis (MAPE)
2015-10-03 NPCD Nonparametric Methods for Cognitive Diagnosis
2015-10-03 optparse Command Line Option Parser
2015-10-03 quantileDA Quantile Classifier
2015-10-03 sotkanet Tools for Sotkanet Open Data Portal
2015-10-02 analogsea Interface to 'Digital Ocean'
2015-10-02 breakaway Species Richness Estimation and Modeling
2015-10-02 cleangeo Cleaning Geometries from Spatial Objects
2015-10-02 colorhcplot Colorful Hierarchical Clustering Dendrograms
2015-10-02 crskdiag Diagnostics for Fine and Gray Model
2015-10-02 fulltext Full Text of 'Scholarly' Articles Across Many Data Sources
2015-10-02 GeoBoxplot Geographic Box Plot
2015-10-02 imputeMissings Impute Missing Values in a Predictive Context
2015-10-02 LOGIT Functions, Data and Code for Binary and Binomial Data
2015-10-02 R2Cuba Multidimensional Numerical Integration
2015-10-02 SphericalK Spherical K-Function
2015-10-02 spocc Interface to Species Occurrence Data Sources
2015-10-01 BAT Biodiversity Assessment Tools
2015-10-01 cgam Constrained Generalized Additive Model
2015-10-01 etma Epistasis Test in Meta-Analysis (ETMA)
2015-10-01 fail File Abstraction Interface Layer (FAIL)
2015-10-01 Grace Graph-Constrained Estimation and Hypothesis Testing
2015-10-01 kerndwd Distance Weighted Discrimination (DWD) and Kernel Methods
2015-10-01 lifecontingencies Financial and Actuarial Mathematics for Life Contingencies
2015-10-01 LSTS Locally Stationary Time Series
2015-10-01 MetaLandSim A Tool for Landscape and Range Expansion Simulation
2015-10-01 phreeqc R Interface to Geochemical Modeling Software
2015-10-01 RcmdrPlugin.EBM Rcmdr Evidence Based Medicine Plug-in Package
2015-10-01 rpart.plot Plot 'rpart' Models: An Enhanced Version of 'plot.rpart'
2015-10-01 sanon Stratified Analysis with Nonparametric Covariable Adjustment
2015-10-01 sdcMicro Statistical Disclosure Control Methods for Anonymization of Microdata and Risk Estimation
2015-10-01 snpEnrichment SNPs Enrichment Analysis
2015-10-01 sparsereg Sparse Bayesian Models for Regression, Subgroup Analysis, and Panel Data
2015-10-01 tsna Tools for Temporal Social Network Analysis
2015-09-30 frailtySurv General Semiparametric Shared Frailty Model
2015-09-30 simPop Simulation of Synthetic Populations for Survey Data Considering Auxiliary Information
2015-09-29 BTLLasso Modelling Heterogeneity in Paired Comparison Data
2015-09-29 classInt Choose Univariate Class Intervals
2015-09-29 ConsRank Compute the Median Ranking(s) According to the Kemeny's Axiomatic Approach
2015-09-29 convoSPAT Convolution-Based Nonstationary Spatial Modeling
2015-09-29 DAISIE Dynamical Assembly of Islands by Speciation, Immigration and Extinction
2015-09-29 extremogram Estimation of Extreme Value Dependence for Time Series Data
2015-09-29 icd9 Tools for Working with ICD-9 Codes, and Finding Comorbidities
2015-09-29 kernelFactory Kernel Factory: An Ensemble of Kernel Machines
2015-09-29 learNN Examples of Neural Networks
2015-09-29 lfstat Calculation of Low Flow Statistics for Daily Stream Flow Data
2015-09-29 maptools Tools for Reading and Handling Spatial Objects
2015-09-29 MXM Discovering Multiple, Statistically-Equivalent Signatures
2015-09-29 partykit A Toolkit for Recursive Partytioning
2015-09-29 PBD Protracted Birth-Death Model of Diversification
2015-09-29 popEpi Functions for Epidemiological Analysis using Population Data
2015-09-29 rfUtilities Random Forests Model Selection and Performance Evaluation
2015-09-29 spgrass6 Interface Between GRASS 6+ Geographical Information System and R
2015-09-29 spgwr Geographically Weighted Regression
2015-09-29 splancs Spatial and Space-Time Point Pattern Analysis
2015-09-29 wbsts Multiple Change-Point Detection for Nonstationary Time Series
2015-09-28 ABCanalysis Computed ABC Analysis
2015-09-28 cardioModel Cardiovascular Safety Exposure-Response Modeling in Early-Phase Clinical Studies
2015-09-28 covmat Covariance Matrix Estimation
2015-09-28 cquad Conditional Maximum Likelihood for Quadratic Exponential Models for Binary Panel Data
2015-09-28 iLaplace Improved Laplace Approximation for Integrals of Unimodal Functions
2015-09-28 internetarchive An API Client for the Internet Archive
2015-09-28 metafor Meta-Analysis Package for R
2015-09-28 MoTBFs Learning Hybrid Bayesian Networks using Mixtures of Truncated Basis Functions
2015-09-28 pdc Permutation Distribution Clustering
2015-09-28 pwrRasch Statistical Power Simulation for Testing the Rasch Model
2015-09-28 rleafmap Interactive Maps with R and Leaflet
2015-09-28 Rssa A Collection of Methods for Singular Spectrum Analysis
2015-09-28 SOPIE Non-Parametric Estimation of the Off-Pulse Interval of a Pulsar
2015-09-28 tmlenet Targeted Maximum Likelihood Estimation for Network Data
2015-09-28 wkb Convert Between Spatial Objects and Well-Known Binary Geometry
2015-09-27 dataonderivatives Easily Source Publicly Available Data on Derivatives
2015-09-27 epiR Tools for the Analysis of Epidemiological Data
2015-09-27 ICS Tools for Exploring Multivariate Data via ICS/ICA
2015-09-27 multipleNCC Weighted Cox-regression for Nested Case-Control Data
2015-09-27 plotpc Plot Principal Component Histograms Around a Scatter Plot
2015-09-27 rankdist Distance Based Ranking Models
2015-09-27 twostageTE Two-Stage Threshold Estimation
2015-09-26 BCBCSF Bias-Corrected Bayesian Classification with Selected Features
2015-09-26 bdots Bootstrapped Differences of Time Series
2015-09-26 Cairo R graphics device using cairo graphics library for creating high-quality bitmap (PNG, JPEG, TIFF), vector (PDF, SVG, PostScript) and display (X11 and Win32) output
2015-09-26 DRIP Discontinuous Regression and Image Processing
2015-09-26 erp.easy Event-Related Potential (ERP) Data Exploration Made Easy
2015-09-26 nivm Noninferiority Tests with Variable Margins
2015-09-26 TTS Master Curve Estimates Corresponding to Time-Temperature Superposition
2015-09-26 weightTAPSPACK Weight TAPS Data
2015-09-25 asdreader Reading ASD Binary Files in R
2015-09-25 boral Bayesian Ordination and Regression AnaLysis
2015-09-25 drsmooth Dose-Response Modeling with Smoothing Splines
2015-09-25 DSsim Distance Sampling Simulations
2015-09-25 KoulMde Koul's Minimum Distance Estimation in Linear Regression and Autoregression Model
2015-09-25 LDRTools Tools for Linear Dimension Reduction
2015-09-25 mads Multi-Analysis Distance Sampling
2015-09-25 MANCIE Matrix Analysis and Normalization by Concordant Information Enhancement
2015-09-25 mmeln Estimation of Multinormal Mixture Distribution
2015-09-25 multiwayvcov Multi-way Standard Error Clustering
2015-09-25 nanop Tools for Nanoparticle Simulation and Calculation of PDF and Total Scattering Structure Function
2015-09-25 neotoma Access to the Neotoma Paleoecological Database Through R
2015-09-25 opencpu A System for Embedded Scientific Computing and Reproducible Research with R
2015-09-25 pegas Population and Evolutionary Genetics Analysis System
2015-09-25 polyfreqs Bayesian Population Genomics in Autopolyploids
2015-09-25 pomp Statistical Inference for Partially Observed Markov Processes
2015-09-25 qdapTools Tools for the 'qdap' Package
2015-09-25 rbiouml Interact with BioUML Server
2015-09-25 Skillings.Mack The Skillings-Mack Test Statistic for Block Designs with Missing Observations
2015-09-25 STAND Statistical Analysis of Non-Detects
2015-09-25 timeSeq Detecting Differentially Expressed Genes in Time Course RNA-Seq Data
2015-09-25 TP.idm Estimation of Transition Probabilities for the Illness-Death Model
2015-09-25 xergm Extensions of Exponential Random Graph Models
2015-09-24 BiodiversityR Package for Community Ecology and Suitability Analysis
2015-09-24 drLumi Multiplex Immunoassays Data Analysis
2015-09-24 ecoreg Ecological Regression using Aggregate and Individual Data
2015-09-24 JAGUAR Joint Analysis of Genotype and Group-Specific Variability Using a Novel Score Test Approach to Map Expression Quantitative Trait Loci (eQTL)
2015-09-24 meteo Spatio-Temporal Analysis and Mapping of Meteorological Observations
2015-09-24 MixGHD Model Based Clustering, Classification and Discriminant Analysis Using the Mixture of Generalized Hyperbolic Distributions
2015-09-24 NostalgiR Advanced Text-Based Plots
2015-09-24 pse Parameter Space Exploration with Latin Hypercubes
2015-09-24 RcppEigen 'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library
2015-09-24 sandwich Robust Covariance Matrix Estimators
2015-09-24 tsintermittent Intermittent Time Series Forecasting
2015-09-24 wikipediatrend Public Subject Attention via Wikipedia Page Access Statistics
2015-09-23 Evapotranspiration Modelling Actual, Potential and Reference Crop Evapotranspiration
2015-09-23 goft Tests of Fit for some Probability Distributions
2015-09-23 iC10 A Copy Number and Expression-Based Classifier for Breast Tumours
2015-09-23 ICSNP Tools for Multivariate Nonparametrics
2015-09-23 lqmm Linear Quantile Mixed Models
2015-09-23 MaxentVariableSelection Selecting the Best Set of Relevant Environmental Variables along with the Optimal Regularization Multiplier for Maxent Niche Modeling
2015-09-23 MultiGHQuad Multidimensional Gauss-Hermite Quadrature
2015-09-23 npsf Nonparametric and Stochastic Efficiency and Productivity Analysis
2015-09-23 packagetrackr Track R Package Downloads from RStudio's CRAN Mirror
2015-09-23 rentrez Entrez in R
2015-09-23 R.matlab Read and Write MAT Files and Call MATLAB from Within R
2015-09-23 smacpod Statistical Methods for the Analysis of Case-Control Point Data
2015-09-23 tigerstats R Functions for Elementary Statistics
2015-09-23 wBoot wBootstrap Routines
2015-09-23 withr Run Code 'With' Temporarily Modified Global State
2015-09-22 bvpSolve Solvers for Boundary Value Problems of Differential Equations
2015-09-22 LPCM Local Principal Curve Methods
2015-09-22 simcausal Simulating Longitudinal Data with Causal Inference Applications
2015-09-22 udunits2 Udunits-2 Bindings for R
2015-09-21 bedr Genomic Region Processing using Tools Such as Bedtools, Bedops and Tabix
2015-09-21 CBPS Covariate Balancing Propensity Score
2015-09-21 graphscan Cluster Detection with Hypothesis Free Scan Statistic
2015-09-21 MCMCglmm MCMC Generalised Linear Mixed Models
2015-09-21 Rip46 Utils for IP4 and IP6 Addresses
2015-09-21 rollply Moving-Window Add-on for 'plyr'
2015-09-21 SIMMS Subnetwork Integration for Multi-Modal Signatures
2015-09-21 speedglm Fitting Linear and Generalized Linear Models to Large Data Sets
2015-09-21 WaterML Fetch and Analyze Data from WaterML or CUAHSI WaterOneFlow Web Service
2015-09-20 arqas Application in R for Queueing Analysis and Simulation
2015-09-20 climtrends Statistical Methods for Climate Sciences
2015-09-20 cord Community Estimation in G-Models via CORD
2015-09-20 HMDHFDplus Read HMD and HFD Data from the Web
2015-09-20 IRTShiny Item Response Theory via Shiny
2015-09-20 qtlbook Datasets for the R/qtl Book
2015-09-20 R2SWF Convert R Graphics to Flash Animations
2015-09-20 rcrypt Symmetric File Encryption Using GPG
2015-09-20 SelvarMix Regularization for Variable Selection in Model-Based Clustering and Discriminant Analysis
2015-09-19 BayesFactor Computation of Bayes Factors for Common Designs
2015-09-19 climwin Climate Window Analysis
2015-09-19 crimelinkage Statistical Methods for Crime Series Linkage
2015-09-19 data.table Extension of Data.frame
2015-09-19 glycanr Tools for Analysing N-Glycan Data
2015-09-19 ImportExport Import and Export Data
2015-09-19 kelvin Calculate Solutions to the Kelvin Differential Equation using Bessel Functions
2015-09-19 lpSolve Interface to 'Lp_solve' v. 5.5 to Solve Linear/Integer Programs
2015-09-19 lsgl Linear Sparse Group Lasso
2015-09-19 mipfp Multidimensional Iterative Proportional Fitting and Alternative Models
2015-09-19 msgl High Dimensional Multiclass Classification Using Sparse Group Lasso
2015-09-19 network Classes for Relational Data
2015-09-19 patPRO Visualizing Temporal Microbiome Data
2015-09-19 sglOptim Generic Sparse Group Lasso Solver
2015-09-18 dhglm Double Hierarchical Generalized Linear Models
2015-09-18 evaluate Parsing and Evaluation Tools that Provide More Details than the Default
2015-09-18 formatR Format R Code Automatically
2015-09-18 GAR Authorize and Request Google Analytics Data
2015-09-18 GRTo Tools for the Analysis of Gutenberg-Richter Distributions of Earthquake Magnitudes
2015-09-18 highr Syntax Highlighting for R Source Code
2015-09-18 iNEXT Interpolation and Extrapolation for Species Diversity
2015-09-18 laGP Local Approximate Gaussian Process Regression
2015-09-18 lordif Logistic Ordinal Regression Differential Item Functioning using IRT
2015-09-18 MBTAr Access Data from the Massachusetts Bay Transit Authority (MBTA) Web API
2015-09-18 monitoR Acoustic Template Detection in R
2015-09-18 PAFit Nonparametric Estimation of Preferential Attachment and Node Fitness in Temporal Complex Networks
2015-09-18 pointRes Analyzing Pointer Years and Components of Resilience
2015-09-18 prop.comb.RR Analyzing Combination of Proportions and Relative Risk
2015-09-18 rlecuyer R Interface to RNG with Multiple Streams
2015-09-18 RSiteCatalyst R Client for Adobe Analytics API V1.4
2015-09-18 Rtwalk The R Implementation of the 't-walk' MCMC Algorithm
2015-09-18 StockChina Real-Time Stock Price & Volume in China Market
2015-09-18 TDA Statistical Tools for Topological Data Analysis
2015-09-18 versions Query and Install Specific Versions of Packages on CRAN
2015-09-17 backtest Exploring Portfolio-Based Conjectures About Financial Instruments
2015-09-17 describer Describe Data in R Using Common Descriptive Statistics
2015-09-17 lira LInear Regression in Astronomy
2015-09-17 multirich Calculate Multivariate Richness via UTC and sUTC
2015-09-17 pro Point-Process Response Model for Optogenetics
2015-09-17 psbcGroup Penalized Semiparametric Bayesian Cox Models with Shrinkage and Grouping Priors
2015-09-17 Quandl API Wrapper for Quandl.com
2015-09-17 Rlof R Parallel Implementation of Local Outlier Factor(LOF)
2015-09-17 solr General Purpose R Interface to Solr
2015-09-17 sparr SPAtial Relative Risk
2015-09-17 spatialprobit Spatial Probit Models
2015-09-17 switchr Installing, Managing, and Switching Between Distinct Sets of Installed Packages
2015-09-17 tmvnsim Truncated Multivariate Normal Simulation
2015-09-17 VennDiagram Generate High-Resolution Venn and Euler Plots
2015-09-16 asbio A Collection of Statistical Tools for Biologists
2015-09-16 bold Interface to Bold Systems API
2015-09-16 CARBayes Spatial Generalised Linear Mixed Models for Areal Unit Data
2015-09-16 discreteRV Create and Manipulate Discrete Random Variables
2015-09-16 fanc Penalized Likelihood Factor Analysis via Nonconvex Penalty
2015-09-16 FLLat Fused Lasso Latent Feature Model
2015-09-16 huge High-Dimensional Undirected Graph Estimation
2015-09-16 IRISMustangMetrics Statistics and Metrics for Seismic Data
2015-09-16 JPEN Covariance and Inverse Covariance Matrix Estimation Using Joint Penalty
2015-09-16 ldatuning Tuning of the LDA Models Parameters
2015-09-16 OBsMD Objective Bayesian Model Discrimination in Follow-Up Designs
2015-09-16 peptider Evaluation of Diversity in Nucleotide Libraries
2015-09-16 readMzXmlData Reads Mass Spectrometry Data in mzXML Format
2015-09-16 rplos Interface to the Search 'API' for 'PLoS' Journals
2015-09-16 TestingSimilarity Bootstrap Test for Similarity of Dose Response Curves Concerning the Maximum Absolute Deviation
2015-09-16 tgcd Thermoluminescence Glow Curve Deconvolution
2015-09-15 akima Interpolation of Irregularly and Regularly Spaced Data
2015-09-15 BBEST Bayesian Estimation of Incoherent Neutron Scattering Backgrounds
2015-09-15 bclust Bayesian Hierarchical Clustering Using Spike and Slab Models
2015-09-15 checkpoint Install Packages from Snapshots on the Checkpoint Server for Reproducibility
2015-09-15 cpgen Parallelized Genomic Prediction and GWAS
2015-09-15 DCchoice Analyzing Dichotomous Choice Contingent Valuation Data
2015-09-15 grpregOverlap Penalized Regression Models with Overlapping Grouped Covariates
2015-09-15 installr Using R to Install Stuff (Such As: R, Rtools, RStudio, Git, and More!)
2015-09-15 Lahman Sean Lahman's Baseball Database
2015-09-15 lgarch Simulation and Estimation of Log-GARCH Models
2015-09-15 lintr Static R Code Analysis
2015-09-15 OptGS Near-Optimal and Balanced Group-Sequential Designs for Clinical Trials with Continuous Outcomes
2015-09-15 PPtreeViz Projection Pursuit Classification Tree Visualization
2015-09-15 RPANDA Phylogenetic ANalyses of DiversificAtion
2015-09-15 VIM Visualization and Imputation of Missing Values
2015-09-15 wccsom SOM Networks for Comparing Patterns with Peak Shifts
2015-09-14 AutoregressionMDE Minimum Distance Estimation in Autoregressive Model
2015-09-14 LinearRegressionMDE Minimum Distance Estimation in Linear Regression Model
2015-09-14 pmc Phylogenetic Monte Carlo
2015-09-14 runjags Interface Utilities, Model Templates, Parallel Computing Methods and Additional Distributions for MCMC Models in JAGS
2015-09-13 Boruta Wrapper Algorithm for All-Relevant Feature Selection
2015-09-13 ESKNN Ensemble of Subset of K-Nearest Neighbours Classifiers for Classification and Class Membership Probability Estimation
2015-09-13 LGRF Set-Based Tests for Genetic Association in Longitudinal Studies
2015-09-13 medflex Flexible Mediation Analysis Using Natural Effect Models
2015-09-12 GenOrd Simulation of Discrete Random Variables with Given Correlation Matrix and Marginal Distributions
2015-09-12 hnp Half-Normal Plots with Simulation Envelopes
2015-09-12 refund.shiny Interactive Plotting for Functional Data Analyses
2015-09-12 traits Species Trait Data from Around the Web
2015-09-11 CAvariants Correspondence Analysis Variants
2015-09-11 CensMixReg Censored Linear Mixture Regression Models
2015-09-11 cmrutils Misc Functions of the Center for the Mathematical Research
2015-09-11 devtools Tools to Make Developing R Packages Easier
2015-09-11 fmsb Functions for Medical Statistics Book with some Demographic Data
2015-09-11 hashids Generate Short Unique YouTube-Like IDs (Hashes) from Integers
2015-09-11 hindexcalculator H-Index Calculator using Data from a Web of Science (WoS) Citation Report
2015-09-11 hqreg Regularization Paths for Huber Loss Regression and Quantile Regression Penalized by Lasso or Elastic-Net
2015-09-11 irace Iterated Racing Procedures
2015-09-11 ltsk Local Time Space Kriging
2015-09-11 negenes Estimating the Number of Essential Genes in a Genome
2015-09-11 oai General Purpose 'Oai-PMH' Services Client
2015-09-11 Rdsdp R Interface to DSDP Semidefinite Programming Library
2015-09-11 regRSM Random Subspace Method (RSM) for Linear Regression
2015-09-11 RLRsim Exact (Restricted) Likelihood Ratio Tests for Mixed and Additive Models
2015-09-11 spatialfil Application of 2D Convolution Kernel Filters to Matrices or 3D Arrays
2015-09-11 svgPanZoom R 'Htmlwidget' to Add Pan and Zoom to Almost any R Graphic
2015-09-11 xseq Assessing Functional Impact on Gene Expression of Mutations in Cancer
2015-09-10 acmeR Implements ACME Estimator of Bird and Bat Mortality by Wind Turbines
2015-09-10 blsAPI Request Data from the U.S. Bureau of Labor Statistics API
2015-09-10 satellite Various Functions for Handling and Manipulating Remote Sensing Data
2015-09-10 StatMethRank Statistical Methods for Ranking Data
2015-09-10 ThreeGroups ML Estimator for Baseline-Placebo-Treatment (Three-Group) Experiments
2015-09-10 tidyr Easily Tidy Data with 'spread()' and 'gather()' Functions
2015-09-10 tm.plugin.dc Text Mining Distributed Corpus Plug-In
2015-09-09 chngpt Change Point Regression
2015-09-09 disclapmix Discrete Laplace Mixture Inference using the EM Algorithm
2015-09-09 geometry Mesh Generation and Surface Tesselation
2015-09-09 mfp Multivariable Fractional Polynomials
2015-09-09 ms.sev Package for Calculation of ARMSS, Local MSSS and Global MSSS
2015-09-09 onls Orthogonal Nonlinear Least-Squares Regression
2015-09-09 pla Parallel Line Assays
2015-09-09 profilr Quickly Profile Data in R
2015-09-09 psychomix Psychometric Mixture Models
2015-09-09 quantregForest Quantile Regression Forests
2015-09-09 randomizeR Randomization for Clinical Trials
2015-09-09 rlist A Toolbox for Non-Tabular Data Manipulation
2015-09-09 rprintf Adaptive Builder for Formatted Strings
2015-09-09 shinydashboard Create Dashboards with 'Shiny'
2015-09-09 StatRank Statistical Rank Aggregation: Inference, Evaluation, and Visualization
2015-09-09 validate Data Validation Infrastructure
2015-09-08 anonymizer Anonymize Data Containing Personally Identifiable Information
2015-09-08 bssn Birnbaum-Saunders Model Based on Skew-Normal Distribution
2015-09-08 ClustVarLV Clustering of Variables Around Latent Variables
2015-09-08 Compind Composite Indicators Functions
2015-09-08 datafsm Estimating Finite State Machine Models from Data
2015-09-08 epanetReader Read Epanet Files into R
2015-09-08 ftsspec Spectral Density Estimation and Comparison for Functional Time Series
2015-09-08 ggdendro Create Dendrograms and Tree Diagrams Using 'ggplot2'
2015-09-08 gmapsdistance Distance and Travel Time Between Two Points from Google Maps
2015-09-08 InterVA4 Replicate and Analyse InterVA4
2015-09-08 LambertW Analyze and Gaussianize Heavy-Tailed, Skewed Data
2015-09-08 multgee GEE Solver for Correlated Nominal or Ordinal Multinomial Responses
2015-09-08 prim Patient Rule Induction Method (PRIM)
2015-09-08 RCriteo Loading Criteo Data into R
2015-09-08 refund Regression with Functional Data
2015-09-08 ShrinkCovMat Shrinkage Covariance Matrix Estimators
2015-09-08 SKAT SNP-Set (Sequence) Kernel Association Test
2015-09-08 weatherr Tools for Handling and Scrapping Instant Weather Forecast Feeds
2015-09-08 WhopGenome High-Speed Processing of VCF, FASTA and Alignment Data
2015-09-07 apex Phylogenetic Methods for Multiple Gene Data
2015-09-07 BioMark Find Biomarkers in Two-Class Discrimination Problems
2015-09-07 brr Bayesian Inference on the Ratio of Two Poisson Rates
2015-09-07 BSGW Bayesian Survival Model with Lasso Shrinkage Using Generalized Weibull Regression
2015-09-07 CANSIM2R Directly Extracts Complete CANSIM Data Tables
2015-09-07 compareGroups Descriptive Analysis by Groups
2015-09-07 ExplainPrediction Explanation of Predictions for Classification and Regression Models
2015-09-07 FAdist Distributions that are Sometimes Used in Hydrology
2015-09-07 FAmle Maximum Likelihood and Bayesian Estimation of Univariate Probability Distributions
2015-09-07 fclust Fuzzy Clustering
2015-09-07 geiger Analysis of Evolutionary Diversification
2015-09-07 HDPenReg High-Dimensional Penalized Regression
2015-09-07 mlsjunkgen Use the MLS Junk Generator Algorithm to Generate a Stream of Pseudo-Random Numbers
2015-09-07 palettetown Use Pokemon Inspired Colour Palettes
2015-09-07 performanceEstimation An Infra-Structure for Performance Estimation of Predictive Models
2015-09-07 phonenumber Convert Letters to Numbers and Back as on a Telephone Keypad
2015-09-07 SEERaBomb SEER and Atomic Bomb Survivor Data Analysis Tools
2015-09-07 spinyReg Sparse Generative Model and Its EM Algorithm
2015-09-07 streamMOA Interface for MOA Stream Clustering Algorithms
2015-09-07 ThreeWay Three-Way Component Analysis
2015-09-06 cardidates Identification of Cardinal Dates in Ecological Time Series
2015-09-06 evobiR Comparative and Population Genetic Analyses
2015-09-06 freqdom Frequency Domain Analysis for Multivariate Time Series
2015-09-06 GeoLight Analysis of Light Based Geolocator Data
2015-09-06 gRbase A Package for Graphical Modelling in R
2015-09-06 rasterVis Visualization Methods for Raster Data
2015-09-06 solidearthtide Solid Earth Tide Computation
2015-09-05 ACSWR A Companion Package for the Book "A Course in Statistics with R"
2015-09-05 lrgs Linear Regression by Gibbs Sampling
2015-09-05 PabonLasso Pabon Lasso Graphs and Comparing Situations of a Unit in Two Different Times
2015-09-05 prozor Minimal Protein Set Explaining Peptide Spectrum Matches
2015-09-05 qualV Qualitative Validation Methods
2015-09-05 RcppDE Global Optimization by Differential Evolution in C++
2015-09-05 RoughSets Data Analysis Using Rough Set and Fuzzy Rough Set Theories
2015-09-04 BOIN Bayesian Optimal INterval (BOIN) Design for Single-Agent and Drug-Combination Phase I Clinical Trials
2015-09-04 ChemometricsWithR Chemometrics with R - Multivariate Data Analysis in the Natural Sciences and Life Sciences
2015-09-04 Combine Game-Theoretic Probability Combination
2015-09-04 CORElearn Classification, Regression and Feature Evaluation
2015-09-04 DoubleExpSeq Differential Exon Usage Test for RNA-Seq Data via Empirical Bayes Shrinkage of the Dispersion Parameter
2015-09-04 edesign Maximum Entropy Sampling
2015-09-04 FRESA.CAD FeatuRE Selection Algorithms for Computer Aided Diagnosis
2015-09-04 gender Predict Gender from Names Using Historical Data
2015-09-04 IASD Model Selection for Index of Asymmetry Distribution
2015-09-04 ICC.Sample.Size Calculation of Sample Size and Power for ICC
2015-09-04 kohonen Supervised and Unsupervised Self-Organising Maps
2015-09-04 marelac Tools for Aquatic Sciences
2015-09-04 MRH Multi-Resolution Estimation of the Hazard Rate
2015-09-04 semiArtificial Generator of Semi-Artificial Data
2015-09-04 sgt Skewed Generalized T Distribution Tree
2015-09-04 varhandle Functions for Robust Variable Handling
2015-09-04 zic Bayesian Inference for Zero-Inflated Count Models
2015-09-03 DAAG Data Analysis and Graphics Data and Functions
2015-09-03 ELT Experience Life Tables
2015-09-03 estimability Tools for Assessing Estimability of Linear Predictions
2015-09-03 glamlasso Lasso Penalization in Large Scale Generalized Linear Array Models
2015-09-03 influenceR Software Tools to Quantify Structural Importance of Nodes in a Network
2015-09-03 invLT Inversion of Laplace-Transformed Functions
2015-09-03 lfactors Factors with Levels
2015-09-03 LifeHist Life History Models of Individuals
2015-09-03 mime Map Filenames to MIME Types
2015-09-03 multiplex Analysis of Multiple Social Networks with Algebra
2015-09-03 parfm Parametric Frailty Models
2015-09-03 simecol Simulation of Ecological (and Other) Dynamic Systems
2015-09-03 TSP Traveling Salesperson Problem (TSP)
2015-09-03 unmarked Models for Data from Unmarked Animals
2015-09-02 EasyABC Efficient Approximate Bayesian Computation Sampling Schemes
2015-09-02 functools Functional Programming in R
2015-09-02 IalsaSynthesis Synthesizing Information Across Collaborating Research
2015-09-02 mdsdt Functions for Analysis of Data with General Recognition Theory
2015-09-02 MGSDA Multi-Group Sparse Discriminant Analysis
2015-09-02 MixedPoisson Mixed Poisson Models
2015-09-02 ParetoPosStable Computing, Fitting and Validating the PPS Distribution
2015-09-02 sca Simple Component Analysis
2015-09-02 valottery Results from the Virginia Lottery Draw Games
2015-09-01 ash David Scott's ASH Routines
2015-09-01 CAMAN Finite Mixture Models and Meta-Analysis Tools - Based on C.A.MAN
2015-09-01 classGraph Construct Graphs of S4 Class Hierarchies
2015-09-01 cobs COnstrained B-Splines (Sparse Matrix Based)
2015-09-01 dplyr A Grammar of Data Manipulation
2015-09-01 dtw Dynamic Time Warping Algorithms
2015-09-01 eel Extended Empirical Likelihood
2015-09-01 fpCompare Reliable Comparison of Floating Point Numbers
2015-09-01 interactionTest Calculates Critical Test Statistics to Control False Discovery and Familywise Error Rates in Marginal Effects Plots
2015-09-01 MonoPoly Functions to Fit Monotone Polynomials
2015-09-01 mp Multidimensional Projection Techniques
2015-09-01 Rhpc Permits *apply() Style Dispatch for 'HPC'
2015-09-01 sgeostat An Object-Oriented Framework for Geostatistical Modeling in S+
2015-09-01 spBayesSurv Bayesian Modeling and Analysis of Spatially Correlated Survival Data
2015-09-01 tripack Triangulation of Irregularly Spaced Data
2015-09-01 xml2 Parse XML
2015-08-31 abodOutlier Angle-Based Outlier Detection
2015-08-31 apt Asymmetric Price Transmission
2015-08-31 ChainLadder Statistical Methods and Models for Claims Reserving in General Insurance
2015-08-31 clusterCrit Clustering Indices
2015-08-31 copBasic General Bivariate Copula Theory and Many Utility Functions
2015-08-31 dawai Discriminant Analysis with Additional Information
2015-08-31 erer Empirical Research in Economics with R
2015-08-31 gMCP Graph Based Multiple Comparison Procedures
2015-08-31 hglm Hierarchical Generalized Linear Models
2015-08-31 MixAll Clustering using Mixture Models
2015-08-31 MIXFIM Evaluation of the FIM in NLMEMs using MCMC
2015-08-31 quantreg Quantile Regression
2015-08-31 soc.ca Specific Correspondence Analysis for the Social Sciences
2015-08-31 strvalidator Process Control and Internal Validation of Forensic STR Kits
2015-08-31 titanic Titanic Passenger Survival Data Set
2015-08-31 ZRA Dynamic Plots for Time Series Forecasting
2015-08-30 class Functions for Classification
2015-08-30 humaniformat A Parser for Human Names
2015-08-30 nnet Feed-Forward Neural Networks and Multinomial Log-Linear Models
2015-08-30 npmv Nonparametric Comparison of Multivariate Samples
2015-08-30 psych Procedures for Psychological, Psychometric, and Personality Research
2015-08-30 RcppGSL 'Rcpp' Integration for 'GNU GSL' Vectors and Matrices
2015-08-30 spatial Functions for Kriging and Point Pattern Analysis
2015-08-30 WufooR R Wrapper for the 'Wufoo.com' - The Form Building Service
2015-08-29 beeswarm The Bee Swarm Plot, an Alternative to Stripchart
2015-08-29 ConSpline Partial Linear Least-Squares Regression using Constrained Splines
2015-08-29 dml Distance Metric Learning in R
2015-08-29 docxtractr Extract Data Tables from Microsoft Word Documents
2015-08-29 FlexParamCurve Tools to Fit Flexible Parametric Curves
2015-08-29 restorepoint Debugging with Restore Points
2015-08-29 rwunderground R Interface to Weather Underground API
2015-08-28 ALTopt Optimal Experimental Designs for Accelerated Life Testing
2015-08-28 cacIRT Classification Accuracy and Consistency under Item Response Theory
2015-08-28 detector Detect Data Containing Personally Identifiable Information
2015-08-28 erboost Nonparametric Multiple Expectile Regression via ER-Boost
2015-08-28 GsymPoint Estimation of the Generalized Symmetry Point, an Optimal Cutpoint in Continuous Diagnostic Tests
2015-08-28 KERE Expectile Regression in Reproducing Kernel Hilbert Space
2015-08-28 kin.cohort Analysis of Kin-Cohort Studies
2015-08-28 lookupTable Look-Up Tables using S4
2015-08-28 mpt Multinomial Processing Tree Models
2015-08-28 tmvtnorm Truncated Multivariate Normal and Student t Distribution
2015-08-28 trimr An Implementation of Common Response Time Trimming Methods
2015-08-28 wec Weighted Effect Coding
2015-08-27 cgdsr R-Based API for Accessing the MSKCC Cancer Genomics Data Server (CGDS)
2015-08-27 iaQCA The Irvine Robustness Assessment for Qualitative Comparative Analysis
2015-08-27 intervals Tools for Working with Points and Intervals
2015-08-27 lasvmR A Simple Wrapper for the LASVM Solver
2015-08-27 ldamatch Multivariate Condition Matching by Backwards Elimination Using Linear Discriminant Analysis
2015-08-27 mmod Modern Measures of Population Differentiation
2015-08-27 multic Quantitative Linkage Analysis Tools using the Variance Components Approach
2015-08-27 OptiQuantR Simplifies and Automates Analyzing and Reporting OptiQuant's log Data
2015-08-27 plfMA A GUI to View, Design and Export Various Graphs of Data
2015-08-27 support.CEs Basic Functions for Supporting an Implementation of Choice Experiments
2015-08-27 systemfit Estimating Systems of Simultaneous Equations
2015-08-27 walkr Random Walks in the Intersection of Hyperplanes and the N-Simplex
2015-08-26 ArArRedux Rigorous Data Reduction and Error Propagation of Ar40 / Ar39 Data
2015-08-26 CARBayesST Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data
2015-08-26 FastBandChol Fast Estimation of a Covariance Matrix by Banding the Cholesky Factor
2015-08-26 gamlr Gamma Lasso Regression
2015-08-26 generator Generate Data Containing Fake Personally Identifiable Information
2015-08-26 GGMselect Gaussian Graphs Models Selection
2015-08-26 googleVis R Interface to Google Charts
2015-08-26 ioncopy Calling Copy Number Alterations in Amplicon Sequencing Data
2015-08-26 lcopula Liouville Copulas
2015-08-26 LINselect Selection of Linear Estimators
2015-08-26 mixor Mixed-Effects Ordinal Regression Analysis
2015-08-26 multiway Component Models for Multi-Way Data
2015-08-26 PReMiuM Dirichlet Process Bayesian Clustering, Profile Regression
2015-08-26 REDCapR Interaction Between R and REDCap
2015-08-26 Rfit Rank Estimation for Linear Models
2015-08-26 robustreg Robust Regression Functions
2015-08-26 rtkpp STK++ Integration to R using Rcpp
2015-08-26 SDDE Shortcuts, Detours and Dead Ends (SDDE) Path Types in Genome Similarity Networks
2015-08-26 sisVIVE Some Invalid Some Valid Instrumental Variables Estimator
2015-08-26 SurvRank Rank Based Survival Modelling
2015-08-25 bimixt Estimates Mixture Models for Case-Control Data
2015-08-25 compare Comparing Objects for Differences
2015-08-25 contoureR Contouring of Non-Regular Three-Dimensional Data
2015-08-25 fptdApprox Approximation of First-Passage-Time Densities for Diffusion Processes
2015-08-25 ggplot2movies Movies Data
2015-08-25 ica Independent Component Analysis
2015-08-25 idm Incremental Decomposition Methods
2015-08-25 lawn Client for 'Turfjs' for 'Geospatial' Analysis
2015-08-25 mcmcse Monte Carlo Standard Errors for MCMC
2015-08-25 meta4diag Meta-Analysis for Diagnostic Test Studies
2015-08-25 ONETr Efficient Authenticated Interaction with the O*NET API
2015-08-25 optismixture Optimal Mixture Weights in Multiple Importance Sampling
2015-08-25 RProtoBuf R Interface to the Protocol Buffers API
2015-08-25 SACOBRA Self-Adjusting COBRA
2015-08-25 scales Scale Functions for Visualization
2015-08-24 cheddar Analysis and Visualisation of Ecological Communities
2015-08-24 MareyMap Estimation of Meiotic Recombination Rates Using Marey Maps
2015-08-24 mvMORPH Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data
2015-08-24 SSRMST Sample Size Calculation using Restricted Mean Survival Time
2015-08-24 VBmix Variational Bayesian Mixture Models
2015-08-23 AutoModel Automated Hierarchical Multiple Regression with Assumptions Checking
2015-08-23 diveMove Dive Analysis and Calibration
2015-08-23 emplik Empirical Likelihood Ratio for Censored/Truncated Data
2015-08-23 GUIProfiler Graphical User Interface for Rprof()
2015-08-23 qrcode QRcode Generator for R
2015-08-23 R2jags Using R to Run 'JAGS'
2015-08-23 SensMixed Analysis of Sensory and Consumer Data in a Mixed Model Framework
2015-08-23 snn Stabilized Nearest Neighbor Classifier
2015-08-23 SSN Spatial Modeling on Stream Networks
2015-08-23 stocc Fit a Spatial Occupancy Model via Gibbs Sampling
2015-08-22 blmeco Data Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan"
2015-08-22 CEoptim Cross-Entropy R Package for Optimization
2015-08-22 MatrixModels Modelling with Sparse And Dense Matrices
2015-08-22 opefimor Option Pricing and Estimation of Financial Models in R
2015-08-22 pls Partial Least Squares and Principal Component Regression
2015-08-21 cplm Compound Poisson Linear Models
2015-08-21 DoE.base Full Factorials, Orthogonal Arrays and Base Utilities for DoE Packages
2015-08-21 ggparallel Variations of Parallel Coordinate Plots for Categorical Data
2015-08-21 ifs Iterated Function Systems
2015-08-21 longurl Expand Short URLs Using the 'LongURL' API
2015-08-21 NNTbiomarker Calculate Design Parameters for Biomarker Validation Studies
2015-08-21 nopp Nash Optimal Party Positions
2015-08-21 ptw Parametric Time Warping
2015-08-21 QoLR Analysis of Health-Related Quality of Life in Oncology
2015-08-21 redist Markov Chain Monte Carlo Methods for Redistricting Simulation
2015-08-21 rsggm Robust Sparse Gaussian Graphical Modeling via the Gamma-Divergence
2015-08-21 sde Simulation and Inference for Stochastic Differential Equations
2015-08-21 searchConsoleR Google Search Console APIv3 R Client
2015-08-21 tvm Time Value of Money Functions
2015-08-20 BlakerCI Blaker's Binomial Confidence Limits
2015-08-20 bootsPLS Bootstrap Subsamplings of Sparse Partial Least Squares - Discriminant Analysis for Classification and Signature Identification
2015-08-20 CollocInfer Collocation Inference for Dynamic Systems
2015-08-20 CopyNumber450kCancer Baseline Correction for Copy Number Data from Cancer Samples
2015-08-20 crawl Fit Continuous-Time Correlated Random Walk Models to Animal Movement Data
2015-08-20 gamclass Functions and Data for a Course on Modern Regression and Classification
2015-08-20 GEVStableGarch ARMA-GARCH/APARCH Models with GEV and Stable Distributions
2015-08-20 graticule Meridional and Parallel Lines for Maps
2015-08-20 marked Mark-Recapture Analysis for Survival and Abundance Estimation
2015-08-20 mmpp Various Similarity and Distance Metrics for Marked Point Processes
2015-08-20 qqtest Self Calibrating Quantile-Quantile Plots for Visual Testing
2015-08-20 ramify Additional Matrix Functionality
2015-08-20 RcmdrPlugin.temis Graphical Integrated Text Mining Solution
2015-08-20 SeqFeatR A Tool to Associate FASTA Sequences and Features
2015-08-20 simplr Basic Symbolic Expression Simplification
2015-08-20 weirs A Hydraulics Package to Compute Open-Channel Flow over Weirs
2015-08-19 cem Coarsened Exact Matching
2015-08-19 commentr Print Nicely Formatted Comments for Use in Script Files
2015-08-19 DIFboost Detection of Differential Item Functioning (DIF) in Rasch Models by Boosting Techniques
2015-08-19 distrom Distributed Multinomial Regression
2015-08-19 foreign Read Data Stored by Minitab, S, SAS, SPSS, Stata, Systat, Weka, dBase, ...
2015-08-19 gamboostLSS Boosting Methods for GAMLSS
2015-08-19 googleAuthR Easy Authentication with Google OAuth2 APIs
2015-08-19 hexbin Hexagonal Binning Routines
2015-08-19 iqLearn Interactive Q-Learning
2015-08-19 labstatR Libreria Del Laboratorio Di Statistica Con R
2015-08-19 lfda Local Fisher Discriminant Analysis
2015-08-19 LifeTables Two-Parameter HMD Model Life Table System
2015-08-19 lulcc Land Use Change Modelling in R
2015-08-19 metagear Comprehensive Research Synthesis Tools for Systematic Reviews and Meta-Analysis
2015-08-19 MetaSKAT Meta Analysis for SNP-Set (Sequence) Kernel Association Test
2015-08-19 MLDS Maximum Likelihood Difference Scaling
2015-08-19 pwr Basic Functions for Power Analysis
2015-08-19 qualvar Implements Indices of Qualitative Variation Proposed by Wilcox (1973)
2015-08-19 R6 Classes with Reference Semantics
2015-08-19 REGENT Risk Estimation for Genetic and Environmental Traits
2015-08-19 rstream Streams of Random Numbers
2015-08-19 Runuran R Interface to the UNU.RAN Random Variate Generators
2015-08-19 sensitivitymv Sensitivity Analysis in Observational Studies
2015-08-19 spsi Shape-Preserving Uni-Variate and Bi-Variate Spline Interpolation
2015-08-19 STI Calculation of the Standardized Temperature Index
2015-08-19 textir Inverse Regression for Text Analysis
2015-08-19 trajectories Classes and Methods for Trajectory Data
2015-08-18 abcrf Approximate Bayesian Computation via Random Forests
2015-08-18 AFLPsim Hybrid Simulation and Genome Scan for Dominant Markers
2015-08-18 dmm Dyadic Mixed Model for Pedigree Data
2015-08-18 GlobalOptions Generate Functions to Get or Set Global Options
2015-08-18 ipw Estimate Inverse Probability Weights
2015-08-18 kml K-Means for Longitudinal Data
2015-08-18 longitudinalData Longitudinal Data
2015-08-18 NlsyLinks Utilities and Kinship Information for Research with the NLSY
2015-08-18 phyndr Matches Tip and Trait Data
2015-08-18 polysat Tools for Polyploid Microsatellite Analysis
2015-08-18 shapes Statistical Shape Analysis
2015-08-18 spTimer Spatio-Temporal Bayesian Modelling Using R
2015-08-18 TSdist Distance Measures for Time Series Data
2015-08-17 addhazard Fit Additive Hazards Models for Survival Analysis
2015-08-17 ASMap Linkage Map Construction using the MSTmap Algorithm
2015-08-17 Bchron Radiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate Estimation, and Non-Parametric Phase Modelling
2015-08-17 BSSasymp Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing Matrix Estimates
2015-08-17 fICA Classical, Reloaded and Adaptive FastICA Algorithms
2015-08-17 GeneralOaxaca Blinder-Oaxaca Decomposition for Generalized Linear Model
2015-08-17 hypergeo The Gauss Hypergeometric Function
2015-08-17 kml3d K-Means for Joint Longitudinal Data
2015-08-17 LotkasLaw Runs Lotka's Law which is One of the Special Applications of Zipf's Law
2015-08-17 mixedMem Tools for Discrete Multivariate Mixed Membership Models
2015-08-17 RcppShark R Interface to the Shark Machine Learning Library
2015-08-17 simmr A Stable Isotope Mixing Model
2015-08-16 A3 Accurate, Adaptable, and Accessible Error Metrics for Predictive Models
2015-08-16 animation A Gallery of Animations in Statistics and Utilities to Create Animations
2015-08-16 filehash Simple Key-Value Database
2015-08-16 ipdw Spatial Interpolation by Inverse Path Distance Weighting
2015-08-16 regexr Readable Regular Expressions
2015-08-16 rugarch Univariate GARCH Models
2015-08-15 AzureML Discover, Publish and Consume Web Services on Microsoft Azure Machine Learning
2015-08-15 gelnet Generalized Elastic Nets
2015-08-15 sfsmisc Utilities from 'Seminar fuer Statistik' ETH Zurich
2015-08-15 SparseM Sparse Linear Algebra
2015-08-14 bootES Bootstrap Effect Sizes
2015-08-14 dataRetrieval Retrieval Functions for USGS and EPA Hydrologic and Water Quality Data
2015-08-14 diffIRT Diffusion IRT Models for Response and Response Time Data
2015-08-14 EGRETci Exploration and Graphics for RivEr Trends (EGRET) Confidence Intervals
2015-08-14 fpc Flexible Procedures for Clustering
2015-08-14 haplo.stats Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous
2015-08-14 JADE Blind Source Separation Methods Based on Joint Diagonalization and Some BSS Performance Criteria
2015-08-14 mboost Model-Based Boosting
2015-08-14 RJafroc Analysis of Data Acquired Using the Receiver Operating Characteristic Paradigm and Its Extensions
2015-08-13 ART Aligned Rank Transform for Nonparametric Factorial Analysis
2015-08-13 EGRET Exploration and Graphics for RivEr Trends (EGRET)
2015-08-13 geospt Geostatistical Analysis and Design of Optimal Spatial Sampling Networks
2015-08-13 MfUSampler Multivariate-from-Univariate (MfU) MCMC Sampler
2015-08-13 QuantifQuantile Estimation of Conditional Quantiles using Optimal Quantization
2015-08-13 rebmix Rough - Enhanced - Bayesian Finite Mixture Modeling
2015-08-13 SIBER Stable Isotope Bayesian Ellipses in R
2015-08-13 trib Analysing and Visualizing Tribology Measurements
2015-08-12 ClimClass Climate Classification According to Several Indices
2015-08-12 clinfun Clinical Trial Design and Data Analysis Functions
2015-08-12 creditr Credit Default Swaps in R
2015-08-12 hoa Higher Order Likelihood Inference
2015-08-12 MDimNormn Multi-Dimensional MA Normalization for Plate Effect
2015-08-12 merTools Tools for Analyzing Mixed Effect Regression Models
2015-08-12 MethylCapSig Detection of Differentially Methylated Regions using MethylCap-Seq Data
2015-08-12 mixexp Design and Analysis of Mixture Experiments
2015-08-12 mmc Multivariate Measurement Error Correction
2015-08-12 mvSLOUCH Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses
2015-08-11 bamdit Bayesian Meta-Analysis of Diagnostic Test Data
2015-08-11 BiTrinA Binarization and Trinarization of One-Dimensional Data
2015-08-11 dosresmeta Performing Multivariate Dose-Response Meta-Analysis
2015-08-11 gdistance Distances and Routes on Geographical Grids
2015-08-11 HRM High-Dimensional Repeated Measures
2015-08-11 poweRlaw Analysis of Heavy Tailed Distributions
2015-08-11 praise Praise Users
2015-08-11 RateDistortion Routines for Solving Rate-Distortion Problems
2015-08-11 restlos Robust Estimation of Location and Scatter
2015-08-10 cusp Cusp-Catastrophe Model Fitting Using Maximum Likelihood
2015-08-10 ExtremeBounds Extreme Bounds Analysis (EBA)
2015-08-10 GameTheory Cooperative Game Theory
2015-08-10 LLSR Data Analysis of Liquid-Liquid Systems
2015-08-10 MixMAP Implements the MixMAP Algorithm
2015-08-10 mutossGUI A Graphical User Interface for the MuToss Project
2015-08-10 ocomposition Regression for Rank-Indexed Compositional Data
2015-08-10 ore An R Interface to the Oniguruma Regular Expression Library
2015-08-10 slfm Tools for Fitting Sparse Latent Factor Model
2015-08-10 smacof Multidimensional Scaling
2015-08-10 SpaDES Develop and Run Spatially Explicit Discrete Event Simulation Models
2015-08-10 TapeR Flexible Tree Taper Curves Based on Semiparametric Mixed Models
2015-08-10 threg Threshold Regression
2015-08-09 bigsplines Smoothing Splines for Large Samples
2015-08-09 biotools Tools for Biometry and Applied Statistics in Agricultural Science
2015-08-09 cdcfluview Retrieve U.S. Flu Season Data from the CDC FluView Portal
2015-08-09 JoSAE Functions for some Unit-Level Small Area Estimators and their Variances
2015-08-09 missDeaths 'Correctly Analyse Disease Recurrence with Missing at Risk Information using Population Mortality'
2015-08-09 perspectev Permutation of Species During Turnover Events
2015-08-09 rafalib Convenience Functions for Routine Data Exploration
2015-08-09 wppExplorer Explorer of World Population Prospects
2015-08-08 AssocTests Genetic Association Studies
2015-08-08 drat Drat R Archive Template
2015-08-08 schumaker Schumaker Shape-Preserving Spline
2015-08-08 threewords Represent Precise Coordinates in Three Words
2015-08-07 bacr Bayesian Adjustment for Confounding
2015-08-07 BCEs0 Bayesian Models for Cost-Effectiveness Analysis in the Presence of Structural Zero Costs
2015-08-07 Ecdat Data Sets for Econometrics
2015-08-07 ELYP Empirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model
2015-08-07 enaR Tools for Ecological Network Analysis
2015-08-07 pid Process Improvement using Data
2015-08-07 quantable Streamline Descriptive Analysis of Quantitative Data Matrices
2015-08-07 RAdwords Loading Google Adwords Data into R
2015-08-07 Rfacebook Access to Facebook API via R
2015-08-07 STEPCAM ABC-SMC Inference of STEPCAM
2015-08-06 BMhyd PCM for Hybridization
2015-08-06 crch Censored Regression with Conditional Heteroscedasticity
2015-08-06 CTTShiny Classical Test Theory via Shiny
2015-08-06 hashr Hash R Objects to Integers Fast
2015-08-06 HiClimR Hierarchical Climate Regionalization
2015-08-06 LFDR.MLE Estimation of the Local False Discovery Rates by Type II Maximum Likelihood Estimation
2015-08-06 olctools Open Location Code Handling in R
2015-08-06 pairwiseCI Confidence Intervals for Two Sample Comparisons
2015-08-06 partitions Additive Partitions of Integers
2015-08-06 tumgr Tumor Growth Rate Analysis
2015-08-06 UsingR Data Sets, Etc. for the Text "Using R for Introductory Statistics", Second Edition
2015-08-05 biosignalEMG Tools for Electromyogram Signals (EMG) Analysis
2015-08-05 clusterSEs Calculate Cluster-Robust p-Values and Confidence Intervals
2015-08-05 credule Credit Default Swap Functions
2015-08-05 e1071 Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
2015-08-05 FactoClass Combination of Factorial Methods and Cluster Analysis
2015-08-05 GMCM Fast Estimation of Gaussian Mixture Copula Models
2015-08-05 kernlab Kernel-Based Machine Learning Lab
2015-08-05 MAVIS Meta Analysis via Shiny
2015-08-05 PCA4TS Segmenting Multiple Time Series by Contemporaneous Linear Transformation
2015-08-05 pmml Generate PMML for Various Models
2015-08-05 pmmlTransformations Transforms Input Data from a PMML Perspective
2015-08-05 sdwd Sparse Distance Weighted Discrimination
2015-08-05 summarytools Dataframe Summaries, Frequency Tables and Numerical Summaries with Customizable Output
2015-08-05 W2CWM2C A Graphical Tool for Wavelet (Cross) Correlation and Wavelet Multiple (Cross) Correlation Analysis
2015-08-04 BenfordTests Statistical Tests for Evaluating Conformity to Benford's Law
2015-08-04 dr Methods for Dimension Reduction for Regression
2015-08-04 httpuv HTTP and WebSocket Server Library
2015-08-04 randNames Package Provides Access to Fake User Data
2015-08-04 RcmdrMisc R Commander Miscellaneous Functions
2015-08-04 rDEA Robust Data Envelopment Analysis (DEA) for R
2015-08-04 RObsDat Data Management for Hydrology and Beyond Using the Observations Data Model
2015-08-04 SemiMarkov Multi-States Semi-Markov Models
2015-08-04 yakmoR A Simple Wrapper for the k-Means Library Yakmo
2015-08-03 ALS Multivariate Curve Resolution Alternating Least Squares (MCR-ALS)
2015-08-03 causaleffect Deriving Expressions of Joint Interventional Distributions and Transport Formulas in Causal Models
2015-08-03 cwhmisc Miscellaneous Functions for Math, Plotting, Printing, Statistics, Strings, and Tools
2015-08-03 D3M Two Sample Test with Wasserstein Metric
2015-08-03 kinship2 Pedigree Functions
2015-08-03 mapproj Map Projections
2015-08-03 repo A Resource Manager for R Objects
2015-08-03 ReporteRs Microsoft Word, Microsoft Powerpoint and HTML Documents Generation
2015-08-03 rts Raster Time Series Analysis
2015-08-03 taber Split and Recombine Your Data
2015-08-03 transcribeR Automated Transcription of Audio Files Through the HP IDOL API
2015-08-02 descr Descriptive Statistics
2015-08-02 Ecfun Functions for Ecdat
2015-08-02 fast Implementation of the Fourier Amplitude Sensitivity Test (FAST)
2015-08-02 forecTheta Forecasting Time Series by Theta Method
2015-08-02 GeneNet Modeling and Inferring Gene Networks
2015-08-02 mixAK Multivariate Normal Mixture Models and Mixtures of Generalized Linear Mixed Models Including Model Based Clustering
2015-08-02 partools Tools for the 'Parallel' Package
2015-08-02 squash Color-Based Plots for Multivariate Visualization
2015-08-02 xgboost Extreme Gradient Boosting
2015-08-01 gendist Generated Probability Distribution Models
2015-08-01 nplr N-Parameter Logistic Regression
2015-08-01 usdm Uncertainty Analysis for Species Distribution Models
2015-07-31 FHtest Tests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class
2015-07-31 Harvest.Tree Harvest the Classification Tree
2015-07-31 iotools I/O Tools for Streaming
2015-07-31 IsoGene Order-Restricted Inference for Microarray Experiments
2015-07-31 MRQoL Minimal Clinically Important Difference and Response Shift Effect for Health-Related Quality of Life
2015-07-31 multcompView Visualizations of Paired Comparisons
2015-07-31 myTAI Performing Phylotranscriptomics with R
2015-07-31 nlstools Tools for Nonlinear Regression Analysis
2015-07-31 oglmx Estimation of Ordered Generalized Linear Models
2015-07-31 optmatch Functions for Optimal Matching
2015-07-31 ORCME Order Restricted Clustering for Microarray Experiments
2015-07-31 OTE Optimal Trees Ensembles for Regression, Classification and Class Membership Probability Estimation
2015-07-31 phonTools Tools for Phonetic and Acoustic Analyses
2015-07-31 rdrop2 Programmatic Interface to the 'Dropbox' API
2015-07-31 ROracle OCI Based Oracle Database Interface for R
2015-07-31 rpca RobustPCA: Decompose a Matrix into Low-Rank and Sparse Components
2015-07-31 sudokuAlt Tools for Making and Spoiling Sudoku Games
2015-07-30 bayesDccGarch The Bayesian Dynamic Conditional Correlation GARCH Model
2015-07-30 bnstruct Bayesian Network Structure Learning from Data with Missing Values
2015-07-30 cmsaf Tools for CM SAF Netcdf Data
2015-07-30 ivmodel Statistical Inference and Sensitivity Analysis for Instrumental Variables Model
2015-07-30 nortest Tests for Normality
2015-07-30 plotmo Plot a Model's Response and Residuals
2015-07-30 R2WinBUGS Running 'WinBUGS' and 'OpenBUGS' from 'R' / 'S-PLUS'
2015-07-30 randtoolbox Toolbox for Pseudo and Quasi Random Number Generation and RNG Tests
2015-07-30 RWinEdt R Interface to WinEdt
2015-07-30 scatterplot3d 3D Scatter Plot
2015-07-30 signal Signal Processing
2015-07-29 bda Density Estimation for Grouped Data
2015-07-29 ClamR Time Series Modeling for Climate Change Proxies
2015-07-29 Crossover Analysis and Search of Crossover Designs
2015-07-29 Distance Distance Sampling Detection Function and Abundance Estimation
2015-07-29 dsm Density Surface Modelling of Distance Sampling Data
2015-07-29 FastRWeb Fast Interactive Framework for Web Scripting Using R
2015-07-29 googlePublicData Working with Google Public Data Explorer DSPL Metadata Files
2015-07-29 HistogramTools Utility Functions for R Histograms
2015-07-29 HSAUR3 A Handbook of Statistical Analyses Using R (3rd Edition)
2015-07-29 lineup Lining Up Two Sets of Measurements
2015-07-29 mrds Mark-Recapture Distance Sampling
2015-07-29 Pade Padé Approximant Coefficients
2015-07-29 pco Panel Cointegration Tests
2015-07-29 pweight P-Value Weighting
2015-07-29 RBerkeley Oracle 'Berkeley DB' Interface for R
2015-07-29 RCryptsy Access to Cryptsy Crypto-Currency Exchange Public Information API via R
2015-07-29 refGenome Gene and Splice Site Annotation Using Annotation Data from Ensembl and UCSC Genome Browsers
2015-07-29 rfPermute Estimate Permutation p-Values for Random Forest Importance Metrics
2015-07-29 Rgnuplot R Interface for Gnuplot
2015-07-29 RRNA Secondary Structure Plotting for RNA
2015-07-29 sns Stochastic Newton Sampler (SNS)
2015-07-29 swfscMisc Miscellaneous Functions for Southwest Fisheries Science Center
2015-07-29 TipDatingBeast Using Tip Dates with Phylogenetic Trees in BEAST
2015-07-29 tm.plugin.europresse Import Articles from 'Europresse' Using the 'tm' Text Mining Framework
2015-07-29 twitteR R Based Twitter Client
2015-07-29 webuse Import Stata 'webuse' Datasets
2015-07-29 wiod World Input Output Database 1995-2011
2015-07-29 yhatr R Binder for the Yhat API
2015-07-28 base64enc Tools for base64 encoding
2015-07-28 bayesSurv Bayesian Survival Regression with Flexible Error and Random Effects Distributions
2015-07-28 cpm Sequential and Batch Change Detection Using Parametric and Nonparametric Methods
2015-07-28 cymruservices Query Team Cymru IP Address, Autonomous System Number (ASN), Border Gateway Protocol (BGP), Bogon and Malware Hash Data Services
2015-07-28 EMbC Expectation-Maximization Binary Clustering
2015-07-28 fasttime Fast Utility Function for Time Parsing and Conversion
2015-07-28 gamlss.mx Fitting Mixture Distributions with GAMLSS
2015-07-28 HSAUR A Handbook of Statistical Analyses Using R (1st Edition)
2015-07-28 HSAUR2 A Handbook of Statistical Analyses Using R (2nd Edition)
2015-07-28 ipred Improved Predictors
2015-07-28 MVA An Introduction to Applied Multivariate Analysis with R
2015-07-28 PKI Public Key Infrastucture for R Based on the X.509 Standard
2015-07-28 ppiPre Predict Protein-Protein Interactions Based on Functional and Topological Similarities
2015-07-28 QFRM Pricing of Vanilla and Exotic Option Contracts
2015-07-28 rplexos Read and Analyze 'PLEXOS' Solutions
2015-07-28 RSclient Client for Rserve
2015-07-28 s2dverification Set of Common Tools for Model Diagnostics
2015-07-28 seewave Sound Analysis and Synthesis
2015-07-28 uuid Tools for generating and handling of UUIDs
2015-07-28 woe Computes Weight of Evidence and Information Values
2015-07-27 d3heatmap Interactive Heat Maps Using 'htmlwidgets' and 'D3.js'
2015-07-27 dcGOR Analysis of Ontologies and Protein Domain Annotations
2015-07-27 DiscreteLaplace Discrete Laplace Distributions
2015-07-27 HiveR 2D and 3D Hive Plots for R
2015-07-27 momr Mining Metaomics Data (MetaOMineR)
2015-07-27 MPTinR Analyze Multinomial Processing Tree Models
2015-07-27 muRL Mailmerge using R, LaTeX, and the Web
2015-07-27 nor1mix Normal (1-d) Mixture Models (S3 Classes and Methods)
2015-07-27 phyext2 An Extension (for Package 'SigTree') of Some of the Classes in Package 'phylobase'
2015-07-27 qrage Tools that Create D3 JavaScript Force Directed Graph from R
2015-07-27 rbamtools An R Package for Reading and Writing BAM (Binary Alignment) Files
2015-07-27 rddtools Toolbox for Regression Discontinuity Design ('RDD')
2015-07-27 rngWELL Toolbox for WELL Random Number Generators
2015-07-27 rtop Interpolation of Data with Variable Spatial Support
2015-07-27 sitar Super Imposition by Translation and Rotation Growth Curve Analysis
2015-07-27 smoothSurv Survival Regression with Smoothed Error Distribution
2015-07-27 spectrino Spectra Visualization, Organizer and Data Preparation
2015-07-26 COMBIA Synergy/Antagonism Analyses of Drug Combinations
2015-07-26 flam Fits Piecewise Constant Models with Data-Adaptive Knots
2015-07-26 landsat8 Landsat 8 Imagery Rescaled to Reflectance, Radiance and/or Temperature
2015-07-26 mHG Minimum-Hypergeometric Test
2015-07-26 packcircles Circle Packing
2015-07-26 RcppZiggurat 'Rcpp' Integration of Different "Ziggurat" Normal RNG Implementations
2015-07-26 rstpm2 Flexible Link-Based Survival Models
2015-07-26 tglm Binary Regressions under Independent Student-t Priors
2015-07-25 equivalence Provides Tests and Graphics for Assessing Tests of Equivalence
2015-07-25 nonlinearTseries Nonlinear Time Series Analysis
2015-07-25 soilwater Implementation of Parametric Formulas for Soil Water Retention or Conductivity Curve
2015-07-25 VideoComparison Video Comparison Tool
2015-07-24 archdata Example Datasets from Archaeological Research
2015-07-24 aspect A General Framework for Multivariate Analysis with Optimal Scaling
2015-07-24 ChemoSpec Exploratory Chemometrics for Spectroscopy
2015-07-24 ddalpha Depth-Based Classification and Calculation of Data Depth
2015-07-24 distillery Method Functions for Confidence Intervals and to Distill Information from an Object
2015-07-24 glmm Generalized Linear Mixed Models via Monte Carlo Likelihood Approximation
2015-07-24 in2extRemes Into the extRemes Package
2015-07-24 influence.ME Tools for Detecting Influential Data in Mixed Effects Models
2015-07-24 ISOpureR Deconvolution of Tumour Profiles
2015-07-24 isotone Active Set and Generalized PAVA for Isotone Optimization
2015-07-24 MazamaSpatialUtils Mazama Science Spatial Data Download and Utility Functions
2015-07-24 modMax Community Structure Detection via Modularity Maximization
2015-07-24 npcp Some Nonparametric Tests for Change-Point Detection in Possibly Multivariate Observations
2015-07-24 phylobase Base Package for Phylogenetic Structures and Comparative Data
2015-07-24 pipe.design Dual-Agent Dose Escalation for Phase I Trials using the PIPE Design
2015-07-24 powerSurvEpi Power and Sample Size Calculation for Survival Analysis of Epidemiological Studies
2015-07-24 quantmod Quantitative Financial Modelling Framework
2015-07-24 randomNames Function for Generating Random Names and a Dataset
2015-07-24 rEMM Extensible Markov Model for Modelling Temporal Relationships Between Clusters
2015-07-24 RKlout Fetch Klout Scores for Twitter Users
2015-07-24 rotl Interface to the 'Open Tree of Life' API
2015-07-24 toOrdinal Function for Converting Cardinal to Ordinal Numbers by Adding a Language Specific Ordinal Indicator to the Number
2015-07-24 TransModel Fit Linear Transformation Models for Censored Data
2015-07-24 varian Variability Analysis in R
2015-07-24 zooaRch Analytical Tools for Zooarchaeological Data
2015-07-23 anacor Simple and Canonical Correspondence Analysis
2015-07-23 BayesComm Bayesian Community Ecology Analysis
2015-07-23 CaDENCE Conditional Density Estimation Network Construction and Evaluation
2015-07-23 cba Clustering for Business Analytics
2015-07-23 colorscience Color Science Methods and Data
2015-07-23 EstHer Estimation of Heritability in High Dimensional Sparse Linear Mixed Models using Variable Selection
2015-07-23 GEVcdn GEV Conditional Density Estimation Network
2015-07-23 homals Gifi Methods for Optimal Scaling
2015-07-23 mixPHM Mixtures of Proportional Hazard Models
2015-07-23 monmlp Monotone Multi-Layer Perceptron Neural Network
2015-07-23 multcomp Simultaneous Inference in General Parametric Models
2015-07-23 munsellinterpol Interpolate Munsell Renotation Data from Hue/Chroma to CIE/sRGB
2015-07-23 pcalg Methods for Graphical Models and Causal Inference
2015-07-23 PGRdup Discover Probable Duplicates in Plant Genetic Resources Collections
2015-07-23 popsom Routines for Constructing and Evaluating Self-Organizing Maps
2015-07-23 PResiduals Probability-Scale Residuals and Residual Correlations
2015-07-23 qrnn Quantile Regression Neural Network
2015-07-23 RaschSampler Rasch Sampler
2015-07-23 saturnin Spanning Trees Used for Network Inference
2015-07-23 scorer Quickly Score Models
2015-07-23 SparseFactorAnalysis Scaling Count and Binary Data with Sparse Factor Analysis
2015-07-23 spikeSlabGAM Bayesian Variable Selection and Model Choice for Generalized Additive Mixed Models
2015-07-23 TraMineRextras TraMineR Extension
2015-07-23 treeClust Cluster Distances Through Trees
2015-07-22 actuar Actuarial Functions and Heavy Tailed Distributions
2015-07-22 adehabitat Analysis of Habitat Selection by Animals
2015-07-22 adehabitatHR Home Range Estimation
2015-07-22 adehabitatHS Analysis of Habitat Selection by Animals
2015-07-22 adehabitatLT Analysis of Animal Movements
2015-07-22 adehabitatMA Tools to Deal with Raster Maps
2015-07-22 daewr Design and Analysis of Experiments with R
2015-07-22 EMMREML Fitting Mixed Models with Known Covariance Structures
2015-07-22 favnums A Dataset of Favourite Numbers
2015-07-22 gamair Data for "GAMs: An Introduction with R"
2015-07-22 gmodels Various R Programming Tools for Model Fitting
2015-07-22 htmltab Assemble Data Frames from HTML Tables
2015-07-22 hybridHclust Hybrid Hierarchical Clustering
2015-07-22 mri Modified Rand Index (1 and 2.1 and 2.2) and Modified Adjusted Rand Index (1 and 2.1 and 2.2)
2015-07-22 mvtnorm Multivariate Normal and t Distributions
2015-07-22 nadiv (Non)Additive Genetic Relatedness Matrices
2015-07-22 PlotPrjNetworks Useful Networking Tools for Project Management
2015-07-22 Rdistance Distance Sampling Analyses
2015-07-22 RDML Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files
2015-07-22 rncl An Interface to the Nexus Class Library
2015-07-22 robustbase Basic Robust Statistics
2015-07-22 stringgaussnet PPI and Gaussian Network Construction from Transcriptomic Analysis Results Integrating a Multilevel Factor
2015-07-21 cluster "Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.
2015-07-21 gamlss.dist Distributions to be Used for GAMLSS Modelling
2015-07-21 jetset One-to-One Gene-Probeset Mapping for Affymetrix Human Microarrays
2015-07-21 RealVAMS Multivariate VAM Fitting
2015-07-20 accrued Data Quality Visualization Tools for Partially Accruing Data
2015-07-20 bsts Bayesian Structural Time Series
2015-07-20 far Modelization for Functional AutoRegressive Processes
2015-07-20 GLSME Generalized Least Squares with Measurement Error
2015-07-20 GNE Computation of Generalized Nash Equilibria
2015-07-20 GPvam Maximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling
2015-07-20 GSIF Global Soil Information Facilities
2015-07-20 gumbel The Gumbel-Hougaard Copula
2015-07-20 nbconvertR Vignette Engine Wrapping IPython Notebooks
2015-07-20 PerFit Person Fit
2015-07-20 PTAk Principal Tensor Analysis on k Modes
2015-07-20 rcicr Reverse-Correlation Image-Classification Toolbox
2015-07-20 rgenoud R Version of GENetic Optimization Using Derivatives
2015-07-20 rhosp Side Effect Risks in Hospital : Simulation and Estimation
2015-07-20 RTDE Robust Tail Dependence Estimation
2015-07-20 SeqGrapheR Simple GUI for Graph Based Visualization of Cluster of DNA Sequence Reads
2015-07-20 sybilSBML SBML Integration in Package Sybil
2015-07-20 tsallisqexp Tsallis q-Exp Distribution
2015-07-20 yaImpute Nearest Neighbor Observation Imputation and Evaluation Tools
2015-07-19 anoint Analysis of Interactions
2015-07-19 glmgraph Graph-Constrained Regularization for Sparse Generalized Linear Models
2015-07-19 nordklimdata1 Dataset for Climate Analysis with Data from the Nordic Region
2015-07-19 pdfetch Fetch Economic and Financial Time Series Data from Public Sources
2015-07-19 SigTree Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree
2015-07-19 thermocouple Temperature Measurement with Thermocouples, RTD and IC Sensors
2015-07-18 dnet Integrative Analysis of Omics Data in Terms of Network, Evolution and Ontology
2015-07-18 kappalab Non-Additive Measure and Integral Manipulation Functions
2015-07-18 lpbrim LP-BRIM Bipartite Modularity
2015-07-18 mediation Causal Mediation Analysis
2015-07-18 pcIRT IRT Models for Polytomous and Continuous Item Responses
2015-07-18 pkgconfig Private Configuration for 'R' Packages
2015-07-18 RAHRS Data Fusion Filters for Attitude Heading Reference System (AHRS) with Several Variants of the Kalman Filter and the Mahoney and Madgwick Filters
2015-07-18 rminer Data Mining Classification and Regression Methods
2015-07-18 ruv Detect and Remove Unwanted Variation using Negative Controls
2015-07-17 aster Aster Models
2015-07-17 EDFIR Estimating Discrimination Factors
2015-07-17 gamlss.add Extra Additive Terms for GAMLSS Models
2015-07-17 gamlss.demo Demos for GAMLSS
2015-07-17 GIGrvg Random Variate Generator for the GIG Distribution
2015-07-17 lmenssp Linear Mixed Effects Models with Non-Stationary Stochastic Processes
2015-07-17 lmms Linear Mixed Effect Model Splines for Modelling and Analysis of Time Course Data
2015-07-17 mcmc Markov Chain Monte Carlo
2015-07-17 qtbase Interface Between R and Qt
2015-07-17 RSpincalc Conversion Between Attitude Representations of DCM, Euler Angles, Quaternions, and Euler Vectors
2015-07-17 SpecHelpers Spectroscopy Related Utilities
2015-07-17 Tinflex Tinflex - Universal Non-Uniform Random Number Generator
2015-07-17 vertexenum Vertex Enumeration of Polytopes
2015-07-16 captioner Numbers Figures and Creates Simple Captions
2015-07-16 efflog The Causal Effects for a Causal Loglinear Model
2015-07-16 exCon Interactive Exploration of Contour Data
2015-07-16 gamlss.cens Fitting an Interval Response Variable Using gamlss.family Distributions
2015-07-16 GOplot Visualization of Functional Analysis Data
2015-07-16 ibelief Belief Function Implementation
2015-07-16 IDTurtle Identify Turtles by their Plastral Biometries
2015-07-16 LindenmayeR Functions to Explore L-Systems (Lindenmayer Systems)
2015-07-16 lmerTest Tests in Linear Mixed Effects Models
2015-07-16 midasr Mixed Data Sampling Regression
2015-07-16 monogeneaGM Geometric Morphometric Analysis of Monogenean Anchors
2015-07-16 rtiff Read and Write TIFF Files
2015-07-16 sdPrior Scale-Dependent Hyperpriors in Structured Additive Distributional Regression
2015-07-16 SparseTSCGM Sparse Time Series Chain Graphical Models
2015-07-16 stmBrowser Structural Topic Model Browser
2015-07-16 webreadr Tools for Reading Formatted Access Log Files
2015-07-15 bcp Bayesian Analysis of Change Point Problems
2015-07-15 Binarize Binarization of One-Dimensional Data
2015-07-15 codetools Code Analysis Tools for R
2015-07-15 crqa Cross-Recurrence Quantification Analysis for Categorical and Continuous Time-Series
2015-07-15 deducorrect Deductive Correction, Deductive Imputation, and Deterministic Correction
2015-07-15 FuncMap Hive Plots of R Package Function Calls
2015-07-15 geocodeHERE Wrapper for Nokia's HERE Geocoding API
2015-07-15 gld Estimation and Use of the Generalised (Tukey) Lambda Distribution
2015-07-15 kfigr Integrated Code Chunk Anchoring and Referencing for R Markdown Documents
2015-07-15 locfdr Computes Local False Discovery Rates
2015-07-15 pogit Bayesian Variable Selection for a Poisson-Logistic Model
2015-07-15 pxweb R Interface to the PX-Web/PC-Axis API
2015-07-15 Rdpack Update and Manipulate Rd Documentation Objects
2015-07-15 ROMIplot Plots Surfaces of Rates of Mortality Improvement
2015-07-15 ROptimizely R Optimizely API
2015-07-15 SwarmSVM Ensemble Learning Algorithms Based on Support Vector Machines
2015-07-15 verification Weather Forecast Verification Utilities
2015-07-14 decode Differential Co-Expression and Differential Expression Analysis
2015-07-14 extremevalues Univariate Outlier Detection
2015-07-14 gridExtra Miscellaneous Functions for "Grid" Graphics
2015-07-14 HBglm Hierarchical Bayesian Regression for GLMs
2015-07-14 HHG Heller-Heller-Gorfine Tests of Independence and Equality of Distributions
2015-07-14 lattice Trellis Graphics for R
2015-07-14 lm.br Linear Model with Breakpoint
2015-07-14 numbers Number-Theoretic Functions
2015-07-14 polspline Polynomial Spline Routines
2015-07-14 pystr Python String Methods in R
2015-07-14 qrjoint Joint Estimation in Linear Quantile Regression
2015-07-14 recommenderlabBX Book-Crossing Dataset (BX) for 'recommenderlab'
2015-07-14 recommenderlabJester Jester Dataset for 'recommenderlab'
2015-07-14 rspa Adapt Numerical Records to Fit (in)Equality Restrictions
2015-07-14 SoundexBR Phonetic-Coding for Portuguese
2015-07-14 stargazer Well-Formatted Regression and Summary Statistics Tables
2015-07-14 treatSens Sensitivity Analysis for Causal Inference
2015-07-13 bootLR Bootstrapped Confidence Intervals for (Negative) Likelihood Ratio Tests
2015-07-13 CLME Constrained Inference for Linear Mixed Effects Models
2015-07-13 crayon Colored Terminal Output
2015-07-13 disposables Create Disposable R Packages for Testing
2015-07-13 dynpred Companion Package to "Dynamic Prediction in Clinical Survival Analysis"
2015-07-13 EstCRM Calibrating Parameters for the Samejima's Continuous IRT Model
2015-07-13 heplots Visualizing Hypothesis Tests in Multivariate Linear Models
2015-07-13 igraphdata A Collection of Network Data Sets for the 'igraph' Package
2015-07-13 npbr Nonparametric Boundary Regression
2015-07-13 oapackage Orthogonal Array Package
2015-07-13 prettyunits Pretty, Human Readable Formatting of Quantities
2015-07-13 rcorpora A Collection of Small Text Corpora of Interesting Data
2015-07-13 RSocrata Download 'Socrata' Data Sets as R Data Frames
2015-07-13 rversions Query 'R' Versions, Including 'r-release' and 'r-oldrel'
2015-07-13 spareserver Client Side Load Balancing
2015-07-13 spark Sparklines in the 'R' Terminal
2015-07-13 whoami Username, Full Name, Email Address, 'GitHub' Username of the Current User
2015-07-12 appnn Amyloid Propensity Prediction Neural Network
2015-07-12 CompareTests Correct for Verification Bias in Diagnostic Accuracy & Agreement
2015-07-12 fame Interface for FAME Time Series Database
2015-07-12 MatchLinReg Combining Matching and Linear Regression for Causal Inference
2015-07-12 RODBCext Parameterized Queries Extension for RODBC
2015-07-12 stmCorrViz A Tool for Structural Topic Model Visualizations
2015-07-12 WMCapacity GUI Implementing Bayesian Working Memory Models
2015-07-11 arm Data Analysis Using Regression and Multilevel/Hierarchical Models
2015-07-11 asht Applied Statistical Hypothesis Tests
2015-07-11 COMPoissonReg Conway-Maxwell Poisson (COM-Poisson) Regression
2015-07-11 crp.CSFP CreditRisk+ Portfolio Model
2015-07-11 EcoGenetics Spatial Analysis of Phenotypic, Genotypic and Environmental Data
2015-07-11 MVR Mean-Variance Regularization
2015-07-11 operators Additional Binary Operators
2015-07-11 penalizedLDA Penalized Classification using Fisher's Linear Discriminant
2015-07-11 subplex Unconstrained Optimization using the Subplex Algorithm
2015-07-10 agRee Various Methods for Measuring Agreement
2015-07-10 argparser Command-Line Argument Parser
2015-07-10 ArgumentCheck Improved Communication to Users with Respect to Problems in Function Arguments
2015-07-10 hitandrun "Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes
2015-07-10 ouch Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses
2015-07-10 rbhl Interface to the 'Biodiversity' 'Heritage' Library
2015-07-10 rcrossref Client for Various 'CrossRef' 'APIs'
2015-07-10 recoder A Simple and Flexible Recoder
2015-07-10 RJaCGH Reversible Jump MCMC for the Analysis of CGH Arrays
2015-07-10 scout Implements the Scout Method for Covariance-Regularized Regression
2015-07-10 selectspm Select Point Pattern Models Based on Minimum Contrast, AIC and Goodness of Fit
2015-07-10 smaa Stochastic Multi-Criteria Acceptability Analysis
2015-07-10 TTR Technical Trading Rules
2015-07-09 AcceptanceSampling Creation and Evaluation of Acceptance Sampling Plans
2015-07-09 Biodem Biodemography Functions
2015-07-09 downloader Download Files over HTTP and HTTPS
2015-07-09 edmr Empirical Differentially Methylated Regions Calculation
2015-07-09 gamlss.spatial Spatial Terms in GAMLSS Models
2015-07-09 kknn Weighted k-Nearest Neighbors
2015-07-09 penDvine Flexible Pair-Copula Estimation in D-Vines using Bivariate Penalized Splines
2015-07-09 rebird R Client for the eBird Database of Bird Observations
2015-07-09 topologyGSA Gene Set Analysis Exploiting Pathway Topology
2015-07-08 allanvar Allan Variance Analysis
2015-07-08 aTSA Alternative Time Series Analysis
2015-07-08 Benchmarking Benchmark and Frontier Analysis Using DEA and SFA
2015-07-08 bigGP Distributed Gaussian Process Calculations
2015-07-08 binda Multi-Class Discriminant Analysis using Binary Predictors
2015-07-08 care High-Dimensional Regression and CAR Score Variable Selection
2015-07-08 cccrm Concordance Correlation Coefficient for Repeated (and Non-Repeated) Measures
2015-07-08 corpcor Efficient Estimation of Covariance and (Partial) Correlation
2015-07-08 crossval Generic Functions for Cross Validation
2015-07-08 enigma Client for the 'Enigma' 'API'
2015-07-08 fdrtool Estimation of (Local) False Discovery Rates and Higher Criticism
2015-07-08 FuzzyLP Fuzzy Linear Programming
2015-07-08 genoPlotR Plot Publication-Grade Gene and Genome Maps
2015-07-08 GroupSeq A GUI-Based Program to Compute Probabilities Regarding Group Sequential Designs
2015-07-08 gsbDesign Group Sequential Bayes Design
2015-07-08 GSM Gamma Shape Mixture
2015-07-08 HWEintrinsic Objective Bayesian Testing for the Hardy-Weinberg Equilibrium Problem
2015-07-08 icsw Inverse Compliance Score Weighting
2015-07-08 LogisticDx Diagnostic Tests for Models with a Binomial Response
2015-07-08 longitudinal Analysis of Multiple Time Course Data
2015-07-08 LoopAnalyst A Collection of Tools to Conduct Levins' Loop Analysis
2015-07-08 LSDinterface Reading LSD Results (.res) Files
2015-07-08 mederrRank Bayesian Methods for Identifying the Most Harmful Medication Errors
2015-07-08 pipeR Multi-Paradigm Pipeline Implementation
2015-07-08 polyapost Simulating from the Polya Posterior
2015-07-08 PopGenReport A Simple Framework to Analyse Population Genetic Data
2015-07-08 PopVar Genomic Breeding Tools: Genetic Variance Prediction and Cross-Validation
2015-07-08 proxy Distance and Similarity Measures
2015-07-08 registry Infrastructure for R Package Registries
2015-07-08 sae Small Area Estimation
2015-07-08 sda Shrinkage Discriminant Analysis and CAT Score Variable Selection
2015-07-08 spatialCovariance Computation of Spatial Covariance Matrices for Data on Rectangles
2015-07-08 sperich Auxiliary Functions to Estimate Centers of Biodiversity
2015-07-08 st Shrinkage t Statistic and Correlation-Adjusted t-Score
2015-07-08 StatDataML Read and Write StatDataML Files
2015-07-08 synthpop Generating Synthetic Versions of Sensitive Microdata for Statistical Disclosure Control
2015-07-08 tailloss Estimate the Probability in the Upper Tail of the Aggregate Loss Distribution
2015-07-08 tspmeta Instance Feature Calculation and Evolutionary Instance Generation for the Traveling Salesman Problem
2015-07-08 vardiag Variogram Diagnostics
2015-07-08 vcd Visualizing Categorical Data
2015-07-08 VPdtw Variable Penalty Dynamic Time Warping
2015-07-08 wskm Weighted k-Means Clustering
2015-07-07 adegenet Exploratory Analysis of Genetic and Genomic Data
2015-07-07 EffectTreat Prediction of Therapeutic Success
2015-07-07 futile.any A Tiny Utility Providing Polymorphic Operations
2015-07-07 fuzzyRankTests Fuzzy Rank Tests and Confidence Intervals
2015-07-07 lawstat Tools for Biostatistics, Public Policy, and Law
2015-07-07 move Visualizing and Analyzing Animal Track Data
2015-07-07 pwt8 Penn World Table (Version 8.x)
2015-07-07 replicationInterval Replication Interval Functions
2015-07-07 setwidth Automatically Set the Width Option on Terminal Emulators
2015-07-07 SHELF Tools to Support the Sheffield Elicitation Framework (SHELF)
2015-07-07 skellam Densities and Sampling for the Skellam Distribution
2015-07-07 SocialPosition Social Position Indicators Construction Toolbox
2015-07-07 spoccutils Utilities for Use with 'spocc'
2015-07-07 unfoldr Stereological Unfolding for Spheroidal Particles
2015-07-06 deSolve Solvers for Initial Value Problems of Differential Equations (ODE, DAE, DDE)
2015-07-06 HiddenMarkov Hidden Markov Models
2015-07-06 iBATCGH Integrative Bayesian Analysis of Transcriptomic and CGH Data
2015-07-06 label.switching Relabelling MCMC Outputs of Mixture Models
2015-07-06 LeafArea Rapid Digital Image Analysis of Leaf Area
2015-07-06 MultiPhen A Package to Test for Pleiotropic Effects
2015-07-06 pi0 Estimating the Proportion of True Null Hypotheses for FDR
2015-07-06 rcdd Computational Geometry
2015-07-06 SamplerCompare A Framework for Comparing the Performance of MCMC Samplers
2015-07-06 sdef Synthesizing List of Differentially Expressed Features
2015-07-06 StAMPP Statistical Analysis of Mixed Ploidy Populations
2015-07-05 baseline Baseline Correction of Spectra
2015-07-05 bit64 A S3 Class for Vectors of 64bit Integers
2015-07-05 dequer An R 'Deque' Container
2015-07-05 genderizeR Gender Prediction Based on First Names
2015-07-05 googlesheets Manage Google Spreadsheets from R
2015-07-05 gromovlab Gromov-Hausdorff Type Distances for Labeled Metric Spaces
2015-07-05 potts Markov Chain Monte Carlo for Potts Models
2015-07-05 rLTP R Interface to LTP-Cloud Service
2015-07-05 rredis "Redis" Key/Value Database Client
2015-07-05 schoRsch Tools for Analyzing Factorial Experiments
2015-07-04 ecespa Functions for Spatial Point Pattern Analysis
2015-07-04 forams Foraminifera and Community Ecology Analyses
2015-07-04 gdata Various R Programming Tools for Data Manipulation
2015-07-04 GLDEX Fitting Single and Mixture of Generalised Lambda Distributions (RS and FMKL) using Various Methods
2015-07-04 GLDreg Fit GLD Regression Model and GLD Quantile Regression Model to Empirical Data
2015-07-04 Interatrix Compute Chi-Square Measures with Corrections
2015-07-04 kinfit Routines for Fitting Kinetic Models to Chemical Degradation Data
2015-07-04 nat.utils File System Utility Functions for 'NeuroAnatomy Toolbox'
2015-07-04 OrdFacReg Least Squares, Logistic, and Cox-Regression with Ordered Predictors
2015-07-04 patchSynctex Communication Between Editor and Viewer for Literate Programs
2015-07-04 pooh Partial Orders and Relations
2015-07-04 reporttools Generate LaTeX Tables of Descriptive Statistics
2015-07-04 smoothtail Smooth Estimation of GPD Shape Parameter
2015-07-04 trust Trust Region Optimization
2015-07-04 tseriesEntropy Entropy Based Analysis and Tests for Time Series
2015-07-04 VTrack A Collection of Tools for the Analysis of Remote Acoustic Telemetry Data
2015-07-03 abd The Analysis of Biological Data
2015-07-03 bpcp Beta Product Confidence Procedure for Right Censored Data
2015-07-03 corrgram Plot a Correlogram
2015-07-03 DSL Distributed Storage and List
2015-07-03 EpiContactTrace Epidemiological Tool for Contact Tracing
2015-07-03 exactci Exact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases
2015-07-03 geo Draw and Annotate Maps, Especially Charts of the North Atlantic
2015-07-03 gnumeric Read Data from Files Readable by Gnumeric
2015-07-03 goftest Classical Goodness-of-Fit Tests for Univariate Distributions
2015-07-03 GPareto Gaussian Processes for Pareto Front Estimation and Optimization
2015-07-03 HandTill2001 Multiple Class Area under ROC Curve
2015-07-03 hive Hadoop InteractiVE
2015-07-03 IBDsim Simulation of Chromosomal Regions Shared by Family Members
2015-07-03 logcondens Estimate a Log-Concave Probability Density from iid Observations
2015-07-03 logcondiscr Estimate a Log-Concave Probability Mass Function from Discrete i.i.d. Observations
2015-07-03 LogicReg Logic Regression
2015-07-03 logspline Logspline Density Estimation Routines
2015-07-03 lucid Printing Floating Point Numbers in a Human-Friendly Format
2015-07-03 maSAE Mandallaz' Model-Assisted Small Area Estimators
2015-07-03 modehunt Multiscale Analysis for Density Functions
2015-07-03 mountainplot Mountain Plots, Folded Empirical Cumulative Distribution Plots
2015-07-03 NLP Natural Language Processing Infrastructure
2015-07-03 openxlsx Read, Write and Edit XLSX Files
2015-07-03 paramlink Parametric Linkage Analysis in R
2015-07-03 parma Portfolio Allocation and Risk Management Applications
2015-07-03 powerGWASinteraction Power Calculations for GxE and GxG Interactions for GWAS
2015-07-03 PtProcess Time Dependent Point Process Modelling
2015-07-03 Rpoppler PDF Tools Based on Poppler
2015-07-03 rseedcalc Estimating the Proportion of Genetically Modified Seeds in Seedlots via Multinomial Group Testing
2015-07-03 selectMeta Estimation of Weight Functions in Meta Analysis
2015-07-03 signalHsmm Predict Presence of Signal Peptides
2015-07-03 spd Semi Parametric Distribution
2015-07-03 tagcloud Tag Clouds
2015-07-03 TestScorer GUI for Entering Test Items and Obtaining Raw and Transformed Scores
2015-07-03 tileHMM Hidden Markov Models for ChIP-on-Chip Analysis
2015-07-03 tm Text Mining Package
2015-07-03 ump Uniformly Most Powerful Tests
2015-07-02 AGSDest Estimation in Adaptive Group Sequential Trials
2015-07-02 arulesNBMiner Mining NB-Frequent Itemsets and NB-Precise Rules
2015-07-02 autoencoder Sparse Autoencoder for Automatic Learning of Representative Features from Unlabeled Data
2015-07-02 binseqtest Exact Binary Sequential Designs and Analysis
2015-07-02 ComplexAnalysis Numerically Evaluate Integrals and Derivatives (also Higher Order) of Vector- And Complex-Valued Functions
2015-07-02 gss General Smoothing Splines
2015-07-02 gsscopu Copula Density and 2-D Hazard Estimation using Smoothing Splines
2015-07-02 itsadug Interpreting Time Series and Autocorrelated Data Using GAMMs
2015-07-02 memuse Memory Estimation Utilities
2015-07-02 NHANES Data from the US National Health and Nutrition Examination Study
2015-07-02 rbison Interface to the 'USGS' 'BISON' 'API'
2015-07-02 RenextGUI GUI for Renext
2015-07-02 Rglpk R/GNU Linear Programming Kit Interface
2015-07-02 scuba Diving Calculations and Decompression Models
2015-07-02 SRCS Statistical Ranking Color Scheme for Multiple Pairwise Comparisons
2015-07-02 survival Survival Analysis
2015-07-02 translation.ko R Manuals Literally Translated in Korean
2015-07-02 VIFCP Detecting Change-Points via VIFCP Method
2015-07-01 alphaOutlier Obtain Alpha-Outlier Regions for Well-Known Probability Distributions
2015-07-01 autovarCore Automated Vector Autoregression Models and Networks
2015-07-01 bayesmix Bayesian Mixture Models with JAGS
2015-07-01 causalsens Selection Bias Approach to Sensitivity Analysis for Causal Effects
2015-07-01 CompR Paired Comparison Data Analysis
2015-07-01 Delaporte Statistical Functions for the Delaporte Distribution
2015-07-01 fitbitScraper Scrapes Data from 'www.fitbit.com'
2015-07-01 FractalParameterEstimation Estimation of Parameters p and q for Randomized Sierpinski Carpet for [p-p-p-q]-Model
2015-07-01 GenCAT Genetic Class Association Testing (GenCAT)
2015-07-01 gquad G Quadruplex Motif Prediction Tool
2015-07-01 HDclassif High Dimensional Supervised Classification and Clustering
2015-07-01 maxstat Maximally Selected Rank Statistics
2015-07-01 MiRSEA 'MicroRNA' Set Enrichment Analysis
2015-07-01 pca3d Three Dimensional PCA Plots
2015-07-01 pollstR Client for the HuffPost Pollster API
2015-07-01 samplesize Sample Size Calculation for Various t-Tests and Wilcoxon-Test
2015-07-01 sampling Survey Sampling
2015-07-01 spectralGP Approximate Gaussian Processes Using the Fourier Basis
2015-07-01 topicmodels Topic Models
2015-06-30 climdex.pcic PCIC Implementation of Climdex Routines
2015-06-30 hoardeR Information Retrieval for Genetic Datasets
2015-06-30 intergraph Coercion Routines for Network Data Objects
2015-06-30 koRpus An R Package for Text Analysis
2015-06-30 Maeswrap Wrapper Functions for MAESTRA/MAESPA
2015-06-30 pequod Moderated Regression Package
2015-06-30 phenology Tools to Manage a Parametric Function that Describes Phenology
2015-06-30 random True Random Numbers using RANDOM.ORG
2015-06-30 randomizeBE Function to Create a Random List for Crossover Studies
2015-06-30 RCurl General Network (HTTP/FTP/...) Client Interface for R
2015-06-30 XML Tools for Parsing and Generating XML Within R and S-Plus
2015-06-29 agridat Agricultural Datasets
2015-06-29 boot Bootstrap Functions (Originally by Angelo Canty for S)
2015-06-29 ddeploy Wrapper for the Duke Deploy REST API
2015-06-29 FunChisq Chi-Square and Exact Tests for Non-Parametric Functional Dependencies
2015-06-29 GCPM Generalized Credit Portfolio Model
2015-06-29 gee Generalized Estimation Equation Solver
2015-06-29 hts Hierarchical and Grouped Time Series
2015-06-29 KernSmooth Functions for Kernel Smoothing Supporting Wand & Jones (1995)
2015-06-29 mix Estimation/Multiple Imputation for Mixed Categorical and Continuous Data
2015-06-29 pspline Penalized Smoothing Splines
2015-06-29 RODBC ODBC Database Access
2015-06-29 rpart Recursive Partitioning and Regression Trees
2015-06-29 semTools Useful Tools for Structural Equation Modeling
2015-06-29 simsem SIMulated Structural Equation Modeling
2015-06-29 tree Classification and Regression Trees
2015-06-28 cvxbiclustr Convex Biclustering Algorithm
2015-06-28 ordinal Regression Models for Ordinal Data
2015-06-27 ElemStatLearn Data Sets, Functions and Examples from the Book: "The Elements of Statistical Learning, Data Mining, Inference, and Prediction" by Trevor Hastie, Robert Tibshirani and Jerome Friedman
2015-06-27 knitLatex 'Knitr' Helpers - Mostly Tables
2015-06-27 lba Latent Budget Analysis for Compositional Data
2015-06-27 LncMod Predicting Modulator and Functional/Survival Analysis
2015-06-26 amen Additive and Multiplicative Effects Models for Networks and Relational Data
2015-06-26 assertr Assertive Programming for R Analysis Pipelines
2015-06-26 asypow Calculate Power Utilizing Asymptotic Likelihood Ratio Methods
2015-06-26 Bagidis BAses GIving DIStances
2015-06-26 BHH2 Useful Functions for Box, Hunter and Hunter II
2015-06-26 BrailleR Improved Access for Blind Users
2015-06-26 Fahrmeir Data from the Book "Multivariate Statistical Modelling Based on Generalized Linear Models", First Edition, by Ludwig Fahrmeir and Gerhard Tutz
2015-06-26 GUTS Fast Calculation of the Likelihood of a Stochastic Survival Model
2015-06-26 igraph Network Analysis and Visualization
2015-06-26 KFAS Kalman Filter and Smoother for Exponential Family State Space Models
2015-06-26 netmeta Network Meta-Analysis using Frequentist Methods
2015-06-26 parallelML A Parallel-Voting Algorithm for many Classifiers
2015-06-26 parallelSVM A Parallel-Voting Version of the Support-Vector-Machine Algorithm
2015-06-26 SenSrivastava Datasets from Sen & Srivastava
2015-06-26 seqMeta Meta-Analysis of Region-Based Tests of Rare DNA Variants
2015-06-26 sorvi Finnish Open Government Data Toolkit
2015-06-26 TROM Transcriptome Overlap Measure
2015-06-26 TSMining Mining Univariate and Multivariate Motifs in Time-Series Data
2015-06-26 unbalanced Racing for Unbalanced Methods Selection
2015-06-26 uniqueAtomMat Finding Unique or Duplicated Rows or Columns for Atomic Matrices
2015-06-26 wgaim Whole Genome Average Interval Mapping for QTL Detection using Mixed Models
2015-06-26 whoapi A 'Whoapi' API Client
2015-06-25 adwave Wavelet Analysis of Genomic Data from Admixed Populations
2015-06-25 covr Test Coverage for Packages
2015-06-25 httr Tools for Working with URLs and HTTP
2015-06-25 learnstats An Interactive Environment for Learning Statistics
2015-06-25 RPPanalyzer Reads, Annotates, and Normalizes Reverse Phase Protein Array Data
2015-06-25 snowFT Fault Tolerant Simple Network of Workstations
2015-06-25 XMRF Markov Random Fields for High-Throughput Genetics Data
2015-06-24 BSGS Bayesian Sparse Group Selection
2015-06-24 cclust Convex Clustering Methods and Clustering Indexes
2015-06-24 chron Chronological Objects which can Handle Dates and Times
2015-06-24 ColorPalette Color Palettes Generator
2015-06-24 EpiBayes Implements Hierarchical Bayesian Models for Epidemiological Applications
2015-06-24 formula.tools Utilities for Formulas, Expressions, Calls and Other Objects
2015-06-24 geospacom Facilitate Generating of Distance Matrices Used in Package 'spacom' and Plotting Data on Maps
2015-06-24 leaflet Create Interactive Web Maps with the JavaScript 'Leaflet' Library
2015-06-24 NLPutils Natural Language Processing Utilities
2015-06-24 openNLPdata Apache OpenNLP Jars and Basic English Language Models
2015-06-24 oz Plot the Australian Coastline and States
2015-06-24 polynom A Collection of Functions to Implement a Class for Univariate Polynomial Manipulations
2015-06-24 prc Paired Response Curve
2015-06-24 pscore Standardizing Physiological Composite Risk Endpoints
2015-06-24 pubmed.mineR Text Mining of PubMed Abstracts
2015-06-24 runittotestthat Convert 'RUnit' Test Functions into 'testthat' Tests
2015-06-23 ClustGeo Clustering of Observations with Geographical Constraints
2015-06-23 geosptdb Spatio-Temporal; Inverse Distance Weighting and Radial Basis Functions with Distance-Based Regression
2015-06-23 interpretR Binary Classifier and Regression Model Interpretation Functions
2015-06-23 OasisR Outright Tool for the Analysis of Spatial Inequalities and Segregation
2015-06-23 pcaBootPlot Create 2D Principal Component Plots with Bootstrapping
2015-06-23 quantregGrowth Growth Charts via Regression Quantiles
2015-06-23 Renext Renewal Method for Extreme Values Extrapolation
2015-06-23 selfea Select Features Reliably with Cohen's Effect Sizes
2015-06-23 Sofi Interfaz interactiva con fines didacticos
2015-06-23 ssanv Sample Size Adjusted for Nonadherence or Variability of Input Parameters
2015-06-23 translateSPSS2R Toolset for Translating SPSS-Syntax to R-Code
2015-06-22 biogram N-Gram Analysis of Biological Sequences
2015-06-22 biplotbootGUI Bootstrap on Classical Biplots and Clustering Disjoint Biplot
2015-06-22 cgwtools Miscellaneous Tools
2015-06-22 cherry Multiple Testing Methods for Exploratory Research
2015-06-22 freqweights Working with Frequency Tables
2015-06-22 import An Import Mechanism for R
2015-06-22 lava Latent Variable Models
2015-06-22 metaLik Likelihood Inference in Meta-Analysis and Meta-Regression Models
2015-06-22 parsec Partial Orders in Socio-Economics
2015-06-22 planor Generation of Regular Factorial Designs
2015-06-22 primes Generate and Test for Prime Numbers
2015-06-22 rAvis Interface to the Bird-Watching Dataset Proyecto AVIS
2015-06-22 reglogit Simulation-Based Regularized Logistic Regression
2015-06-22 Rsymphony SYMPHONY in R
2015-06-22 sbmSDP Semidefinite Programming for Fitting Block Models of Equal Block Sizes
2015-06-22 simplexreg Regression Analysis of Proportional Data Using Simplex Distribution
2015-06-22 STMedianPolish Spatio-Temporal Median Polish
2015-06-21 cncaGUI Canonical Non-Symmetrical Correspondence Analysis in R
2015-06-21 FAMILY A Convex Formulation for Modeling Interactions with Strong Heredity
2015-06-21 htmlwidgets HTML Widgets for R
2015-06-20 bayesm Bayesian Inference for Marketing/Micro-Econometrics
2015-06-20 boa Bayesian Output Analysis Program (BOA) for MCMC
2015-06-20 cellranger Translate Spreadsheet Cell Ranges to Rows and Columns
2015-06-20 crrp Penalized Variable Selection in Competing Risks Regression
2015-06-20 latentnet Latent Position and Cluster Models for Statistical Networks
2015-06-20 pryr Tools for Computing on the Language
2015-06-20 RcmdrPlugin.RMTCJags R MTC Jags Rcmdr Plugin
2015-06-19 ergm.count Fit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges
2015-06-19 gamsel Fit Regularization Path for Generalized Additive Models
2015-06-19 graphicalVAR Graphical VAR for Experience Sampling Data
2015-06-19 linkR 3D Lever and Linkage Mechanism Modeling
2015-06-19 multibiplotGUI Multibiplot Analysis in R
2015-06-19 pnf Prime Numbers and Integer Factorization
2015-06-19 scam Shape Constrained Additive Models
2015-06-19 Sejong KoNLP static dictionaries and Sejong project resources
2015-06-19 tmod Transcriptional Module Analysis
2015-06-18 bcrypt 'Blowfish' Password Hashing Algorithm
2015-06-18 directPA Direction Analysis for Pathways and Kinases
2015-06-18 GPLTR Generalized Partially Linear Tree-Based Regression Model
2015-06-18 james.analysis Analysis Tools for the 'JAMES' Framework
2015-06-18 lfl Linguistic Fuzzy Logic
2015-06-18 modQR Multiple-Output Directional Quantile Regression
2015-06-18 riverplot Sankey or Ribbon Plots
2015-06-18 SharpeR Statistical Significance of the Sharpe Ratio
2015-06-18 stepR Fitting Step-Functions
2015-06-17 aop Adverse Outcome Pathway Analysis
2015-06-17 controlTest Median Comparison for Two-Sample Right-Censored Survival Data
2015-06-17 geotopbricks An R Plug-in for the Distributed Hydrological Model GEOtop
2015-06-17 ICC Facilitating Estimation of the Intraclass Correlation Coefficient
2015-06-17 MM2Sdata Gene Expression Datasets for the 'MM2S' Package
2015-06-17 phylocurve Phylogenetic Comparative Methods for Function-Valued and Other High-Dimensional Traits
2015-06-17 svgViewR 3D Animated Interactive Visualizations Using SVG
2015-06-16 AdaptFitOS Adaptive Semiparametric Regression with Simultaneous Confidence Bands
2015-06-16 CommT Comparative Phylogeographic Analysis using the Community Tree Framework
2015-06-16 decompr Global-Value-Chain Decomposition
2015-06-16 gridGraphviz Drawing Graphs with 'grid'
2015-06-16 repijson Tools for Handling EpiJSON (Epidemiology Data) Files
2015-06-16 TMDb Access to TMDb API - Apiary
2015-06-15 BaBooN Bayesian Bootstrap Predictive Mean Matching - Multiple and Single Imputation for Discrete Data
2015-06-15 coxme Mixed Effects Cox Models
2015-06-15 DiceDesign Designs of Computer Experiments
2015-06-15 DiceEval Construction and Evaluation of Metamodels
2015-06-15 DYM Did You Mean?
2015-06-15 Factoshiny Perform Factorial Analysis from FactoMineR with a Shiny Application
2015-06-15 FuzzyStatProb Fuzzy Stationary Probabilities from a Sequence of Observations of an Unknown Markov Chain
2015-06-15 gWidgets2 Rewrite of gWidgets API for Simplified GUI Construction
2015-06-15 kolmim An Improved Evaluation of Kolmogorov's Distribution
2015-06-15 MSIseq Assess Tumor Microsatellite Instability with a Decision Tree Classifier from Exome Somatic Mutations
2015-06-15 rfigshare An R Interface to 'figshare'
2015-06-15 sgRSEA Enrichment Analysis of CRISPR/Cas9 Knockout Screen Data
2015-06-14 beepr Easily Play Notification Sounds on any Platform
2015-06-14 blme Bayesian Linear Mixed-Effects Models
2015-06-14 mmtfa Model-Based Clustering and Classification with Mixtures of Modified t Factor Analyzers
2015-06-14 peacots Periodogram Peaks in Correlated Time Series
2015-06-14 pks Probabilistic Knowledge Structures
2015-06-14 smbinning Optimal Binning for Scoring Modeling
2015-06-13 hierband Convex Banding of the Covariance Matrix
2015-06-13 likelihoodAsy Functions for Likelihood Asymptotics
2015-06-13 pkgKitten Create Simple Packages Which Do not Upset R Package Checks
2015-06-12 CopulaREMADA Copula Mixed Effect Models for Bivariate and Trivariate Meta-Analysis of Diagnostic Test Accuracy Studies
2015-06-12 filematrix File-Backed Matrix Class with Convenient Read and Write Access
2015-06-12 mistat Data Sets, Functions and Examples from the Book: "Modern Industrial Statistics" by Kenett, Zacks and Amberti
2015-06-12 nodeHarvest Node Harvest for Regression and Classification
2015-06-12 plyr Tools for Splitting, Applying and Combining Data
2015-06-12 RcmdrPlugin.HH Rcmdr Support for the HH package
2015-06-12 remote Empirical Orthogonal Teleconnections in R
2015-06-12 RSNNS Neural Networks in R using the Stuttgart Neural Network Simulator (SNNS)
2015-06-12 sensitivity Sensitivity Analysis
2015-06-12 sscor Robust Correlation Estimation and Testing Based on Spatial Signs
2015-06-12 strum STRUctural Modeling of Latent Variables for General Pedigree
2015-06-11 dMod Dynamic Modeling and Parameter Estimation in ODE Models
2015-06-11 DynTxRegime Methods for Estimating Dynamic Treatment Regimes
2015-06-11 EditImputeCont Simultaneous Edit-Imputation for Continuous Microdata
2015-06-11 editrules Parsing, Applying, and Manipulating Data Cleaning Rules
2015-06-11 EntropyExplorer Tools for Exploring Differential Shannon Entropy, Differential Coefficient of Variation and Differential Expression
2015-06-11 ergm.graphlets ERG Modeling Based on Graphlet Properties
2015-06-11 IFP Identifying Functional Polymorphisms
2015-06-11 jagsUI A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses
2015-06-11 LTPDvar LTPD and AOQL Plans for Acceptance Sampling Inspection by Variables
2015-06-11 palr Colour Palettes for Data
2015-06-11 pavo Perceptual Analysis, Visualization and Organization of Spectral Color Data in R
2015-06-11 PEIP Geophysical Inverse Theory and Optimization
2015-06-11 sadists Some Additional Distributions
2015-06-11 SpatialExtremes Modelling Spatial Extremes
2015-06-11 spTDyn Spatially Varying and Spatio-Temporal Dynamic Linear Models
2015-06-10 accrual Bayesian Accrual Prediction
2015-06-10 ApacheLogProcessor Process the Apache Web Server Log Combined Files
2015-06-10 celestial Collection of Common Astronomical Conversion Routines and Functions
2015-06-10 cOde Automated C Code Generation for Use with the 'deSolve' and 'bvpSolve' Packages
2015-06-10 decctools Get Energy Data from the UK Dept of Energy and Climate Change
2015-06-10 domino R Console Bindings for the 'Domino Command-Line Client'
2015-06-10 gMWT Generalized Mann-Whitney Type Tests
2015-06-10 magicaxis Pretty Scientific Plotting with Minor-Tick and log Minor-Tick Support
2015-06-10 meboot Maximum Entropy Bootstrap for Time Series
2015-06-10 mlVAR Multi-Level Vector Autoregression
2015-06-10 modelObj A Model Object Framework for Regression Analysis
2015-06-10 P2C2M Posterior Predictive Checks of Coalescent Models
2015-06-10 parallelMap Unified Interface to Parallelization Back-Ends
2015-06-10 sem Structural Equation Models
2015-06-10 ssfa Spatial Stochastic Frontier Analysis
2015-06-10 switchrGist Publish Package Manifests to GitHub Gists
2015-06-10 VarSelLCM Variable Selection for Model-Based Clustering using the Integrated Complete-Data Likelihood of a Latent Class Model
2015-06-09 DNMF Discriminant Non-Negative Matrix Factorization
2015-06-09 DT A Wrapper of the JavaScript Library 'DataTables'
2015-06-09 lambda.tools Tools for Modeling Data with Functional Programming
2015-06-09 NHMSAR Non-Homogeneous Markov Switching Autoregressive Models
2015-06-09 patchDVI Package to Patch .dvi or .synctex Files
2015-06-09 RcppFaddeeva 'Rcpp' Bindings for the 'Faddeeva' Package
2015-06-09 rknn Random KNN Classification and Regression
2015-06-09 tis Time Indexes and Time Indexed Series
2015-06-08 BNPdensity Ferguson-Klass Type Algorithm for Posterior Normalized Random Measures
2015-06-08 clisymbols Unicode Symbols at the R Prompt
2015-06-08 diptest Hartigan's Dip Test Statistic for Unimodality - Corrected
2015-06-08 inferference Methods for Causal Inference with Interference
2015-06-08 RevEcoR Reverse Ecology Analysis on Microbiome
2015-06-08 smnet Smoothing for Stream Network Data
2015-06-07 datastepr An Implementation of a SAS-Style Data Step
2015-06-07 ISwR Introductory Statistics with R
2015-06-07 scrm Simulating the Evolution of Biological Sequences
2015-06-06 AER Applied Econometrics with R
2015-06-06 BayesGESM Bayesian Analysis of Generalized Elliptical Semi-Parametric Models and Flexible Measurement Error Models
2015-06-06 gap Genetic Analysis Package
2015-06-06 ggvis Interactive Grammar of Graphics
2015-06-06 keypress Wait for a Key Press in a Terminal
2015-06-06 lmtest Testing Linear Regression Models
2015-06-06 nestedRanksTest Mann-Whitney-Wilcoxon Test for Nested Ranks
2015-06-06 strucchange Testing, Monitoring, and Dating Structural Changes
2015-06-05 enviPat Isotope Pattern, Profile and Centroid Calculation for Mass Spectrometry
2015-06-05 ffbase Basic Statistical Functions for Package 'ff'
2015-06-05 lmSupport Support for Linear Models
2015-06-05 progress Terminal Progress Bars
2015-06-05 Rcell Microscopy Based Cytometry Data Analysis Package
2015-06-05 RobustEM Robust Mixture Modeling Fitted via Spatial-EM Algorithm for Model-Based Clustering and Outlier Detection
2015-06-05 seismic Predict Information Cascade by Self-Exciting Point Process
2015-06-04 clustMD Model Based Clustering for Mixed Data
2015-06-04 kineticF Framework for the Analysis of Kinetic Visual Field Data
2015-06-04 preseqR Predicting Species Accumulation Curves
2015-06-04 SAENET A Stacked Autoencoder Implementation with Interface to 'neuralnet'
2015-06-04 zetadiv Functions to Compute Compositional Turnover Using Zeta Diversity
2015-06-03 coreNLP Wrappers Around Stanford CoreNLP Tools
2015-06-03 delt Estimation of Multivariate Densities Using Adaptive Partitions
2015-06-03 EnviroStat Statistical Analysis of Environmental Space-Time Processes
2015-06-03 etasFLP Mixed FLP and ML Estimation of ETAS Space-Time Point Processes
2015-06-03 kwb.hantush Calculation of Groundwater Mounding Beneath an Infiltration Basin
2015-06-03 MLCIRTwithin Latent Class Item Response Theory Models Under 'Within-Item Multi-Dimensionality'
2015-06-03 MVN Multivariate Normality Tests
2015-06-03 nomclust Hierarchical Nominal Clustering Package
2015-06-03 OpasnetUtils Opasnet Modelling Environment Utility Functions
2015-06-03 pointdensityP Point Density for Geospatial Data
2015-06-03 repmis Miscellaneous Tools for Reproducible Research
2015-06-03 score A Package to Score Behavioral Questionnaires
2015-06-03 surveyeditor Generate a Survey that can be Completed by Survey Respondents
2015-06-03 XHWE X Chromosome Hardy-Weinberg Equilibrium
2015-06-02 bootSVD Fast, Exact Bootstrap Principal Component Analysis for High Dimensional Data
2015-06-02 cccd Class Cover Catch Digraphs
2015-06-02 evolvability Calculation of Evolvability Parameters
2015-06-02 FAOSTAT Download Data from the FAOSTAT Database of the Food and Agricultural Organization (FAO) of the United Nations
2015-06-02 gcmr Gaussian Copula Marginal Regression
2015-06-02 HapEstXXR Multi-Locus Stepwise Regression
2015-06-02 JBTools Misc Small Tools and Helper Functions for Other Code of J. Buttlar
2015-06-02 Rphylopars Phylogenetic Comparative Tools for Missing Data and Within-Species Variation
2015-06-02 spanel Spatial Panel Data Models
2015-06-02 spectral.methods Singular Spectrum Analysis (SSA) Tools for Time Series Analysis
2015-06-01 dkDNA Diffusion Kernels on a Set of Genotypes
2015-06-01 Iso Functions to Perform Isotonic Regression
2015-05-31 coefficientalpha Robust Coefficient Alpha and Omega with Missing and Non-Normal Data
2015-05-31 mlxR Simulation of Longitudinal Data
2015-05-31 reconstructr Session Reconstruction and Analysis
2015-05-31 TDAmapper Analyze High-Dimensional Data Using Discrete Morse Theory
2015-05-30 dplR Dendrochronology Program Library in R
2015-05-30 ExtDist Extending the Range of Functions for Probability Distributions
2015-05-30 grpreg Regularization Paths for Regression Models with Grouped Covariates
2015-05-30 hybridEnsemble Build, Deploy and Evaluate Hybrid Ensembles
2015-05-30 influence.SEM Case Influence in Structural Equation Models
2015-05-30 leafletR Interactive Web-Maps Based on the Leaflet JavaScript Library
2015-05-30 RcellData Example Dataset for 'Rcell' Package
2015-05-30 recosystem Recommender System using Matrix Factorization
2015-05-30 signmedian.test Perform Exact Sign Test and Asymptotic Sign Test in Large Samples
2015-05-29 analogue Analogue and Weighted Averaging Methods for Palaeoecology
2015-05-29 cati Community Assembly by Traits: Individuals and Beyond
2015-05-29 dostats Compute Statistics Helper Functions
2015-05-29 esaBcv Estimate Number of Latent Factors and Factor Matrix for Factor Analysis
2015-05-29 EWGoF Goodness-of-Fit Tests for the Exponential and Two-Parameter Weibull Distributions
2015-05-29 fdakma Functional Data Analysis: K-Mean Alignment
2015-05-29 gtools Various R Programming Tools
2015-05-29 ltmle Longitudinal Targeted Maximum Likelihood Estimation
2015-05-29 mets Analysis of Multivariate Event Times
2015-05-29 ncdf.tools Easier 'NetCDF' File Handling
2015-05-29 PoisBinOrdNor Data Generation with Poisson, Binary, Ordinal and Normal Components
2015-05-29 rprime Functions for Working with 'Eprime' Text Files
2015-05-29 RSPS RNA-Seq Power Simulation
2015-05-28 AGD Analysis of Growth Data
2015-05-28 depend.truncation Statistical Inference for Parametric and Semiparametric Models Based on Dependently Truncated Data
2015-05-28 fermicatsR Fermi Large Area Telescope Catalogs
2015-05-28 IgorR Read Binary Files Saved by 'Igor Pro' (Including 'Neuromatic' Data)
2015-05-28 LakeMetabolizer Tools for the Analysis of Ecosystem Metabolism
2015-05-28 loopr Uses an Archive to Amend Previous Stages of a Pipe using Current Output
2015-05-28 nabor Wraps 'libnabo', a Fast K Nearest Neighbour Library for Low Dimensions
2015-05-28 packS4 Toy Example of S4 Package
2015-05-28 RecordLinkage Record Linkage in R
2015-05-28 RhpcBLASctl Control the Number of Threads on 'BLAS'
2015-05-28 rLakeAnalyzer Package for the Analysis of Lake Physics
2015-05-28 Rrdrand 'DRNG' on Intel CPUs with the 'RdRand' Instruction for R
2015-05-28 timereg Flexible Regression Models for Survival Data
2015-05-27 aRxiv Interface to the arXiv API
2015-05-27 BACA Bubble Chart to Compare Biological Annotations by using DAVID
2015-05-27 coenocliner Coenocline Simulation
2015-05-27 empiricalFDR.DESeq2 Simulation-Based False Discovery Rate in RNA-Seq
2015-05-27 evmix Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation
2015-05-27 polyclip Polygon Clipping
2015-05-26 Exact Unconditional Exact Test
2015-05-26 NMF Algorithms and Framework for Nonnegative Matrix Factorization (NMF)
2015-05-26 operator.tools Utilities for Working with R's Operators
2015-05-26 ordinalCont Ordinal Regression Analysis for Continuous Scales
2015-05-26 reval Repeated Function Evaluation for Sensitivity Analysis
2015-05-26 Rtsne T-Distributed Stochastic Neighbor Embedding using Barnes-Hut Implementation
2015-05-26 soiltexture Functions for Soil Texture Plot, Classification and Transformation
2015-05-25 mnormt The Multivariate Normal and t Distributions
2015-05-25 plspm Tools for Partial Least Squares Path Modeling (PLS-PM)
2015-05-25 rjstat Read and Write 'JSON-stat' Data Sets
2015-05-23 ClustMMDD Variable Selection in Clustering by Mixture Models for Discrete Data
2015-05-23 restimizeapi Functions for Working with the 'www.estimize.com' Web Services
2015-05-22 bcv Cross-Validation for the SVD (Bi-Cross-Validation)
2015-05-22 dataview Data and Workspace Browser for Terminals
2015-05-22 dendextendRcpp Faster Dendrogram Manipulation using 'Rcpp'
2015-05-22 denpro Visualization of Multivariate Functions, Sets, and Data
2015-05-22 dpmr Data Package Manager for R
2015-05-22 frbs Fuzzy Rule-Based Systems for Classification and Regression Tasks
2015-05-22 mvmeta Multivariate and Univariate Meta-Analysis and Meta-Regression
2015-05-22 oce Analysis of Oceanographic Data
2015-05-22 reproducer Reproduce Statistical Analyses and Meta-Analyses
2015-05-22 tmle.npvi Targeted Learning of a NP Importance of a Continuous Exposure
2015-05-22 TSdata 'TSdbi' Illustration
2015-05-21 ecp Non-Parametric Multiple Change-Point Analysis of Multivariate Data
2015-05-21 LDPD Probability of Default Calibration
2015-05-21 ordPens Selection and/or Smoothing of Ordinal Predictors
2015-05-21 qdapDictionaries Dictionaries and Word Lists for the 'qdap' Package
2015-05-21 R0 Estimation of R0 and Real-Time Reproduction Number from Epidemics
2015-05-21 riceware A Diceware Passphrase Implementation
2015-05-21 trip Tools for the Analysis of Animal Track Data
2015-05-21 WhiteStripe White Matter Normalization for Magnetic Resonance Images using Whitestripe
2015-05-21 xtermStyle Terminal Text Formatting Using Escape Sequences
2015-05-20 ARTIVA Time-Varying DBN Inference with the ARTIVA (Auto Regressive TIme VArying) Model
2015-05-20 bigml Bindings for the BigML API
2015-05-20 CausalFX Methods for Estimating Causal Effects from Observational Data
2015-05-20 clustertend Check the Clustering Tendency
2015-05-20 decisionSupport Quantitative Support of Decision Making under Uncertainty
2015-05-20 ensembleBMA Probabilistic Forecasting using Ensembles and Bayesian Model Averaging
2015-05-20 list Statistical Methods for the Item Count Technique and List Experiment
2015-05-20 RInside C++ Classes to Embed R in C++ Applications
2015-05-20 shapeR Collection and Analysis of Otolith Shape Data
2015-05-20 SubpathwayGMir Identify Metabolic Subpathways Mediated by MicroRNAs
2015-05-20 TickExec Execution Functions for Tick Data Back Test
2015-05-20 VIGoR Variational Bayesian Inference for Genome-Wide Regression
2015-05-19 FastHCS Robust Algorithm for Principal Component Analysis
2015-05-19 greyzoneSurv Fit a Grey-Zone Model with Survival Data
2015-05-19 IATscores Implicit Association Test Scores Using Robust Statistics
2015-05-19 novelist NOVEL Integration of the Sample and Thresholded (NOVELIST) Correlation and Covariance Estimators
2015-05-19 permute Functions for Generating Restricted Permutations of Data
2015-05-19 prevR Estimating Regional Trends of a Prevalence from a DHS
2015-05-19 QCAfalsePositive Tests for Type I Error in Qualitative Comparative Analysis (QCA)
2015-05-19 RbioRXN Process Rhea, KEGG, MetaCyc, Unipathway Biochemical Reaction Data
2015-05-19 RFgroove Importance Measure and Selection for Groups of Variables with Random Forests
2015-05-19 rivervis River Visualisation Tool
2015-05-19 rriskDistributions Fitting Distributions to Given Data or Known Quantiles
2015-05-19 threejs Interactive 3D Scatter Plots and Globes
2015-05-18 Dark The Analysis of Dark Adaptation Data
2015-05-18 ETLUtils Utility Functions to Execute Standard Extract/Transform/Load Operations (using Package 'ff') on Large Data
2015-05-18 MInt Learn Direct Interaction Networks
2015-05-18 ocedata Oceanographic Datasets for Oce
2015-05-18 rotationForest Fit and Deploy Rotation Forest Models
2015-05-18 supcluster Supervised Cluster Analysis
2015-05-17 hergm Hierarchical Exponential-Family Random Graph Models
2015-05-17 odeintr C++ ODE Solvers Compiled on-Demand
2015-05-17 PoisBinOrdNonNor Generation of up to Four Different Types of Variables
2015-05-16 pdR Panel Data Regression: Threshold Model and Unit Root Tests
2015-05-16 TTmoment Sampling and Calculating the First and Second Moments for the Doubly Truncated Multivariate t Distribution
2015-05-15 CatDyn Fishery Stock Assessment by Generalized Depletion Models
2015-05-15 FSInteract Fast Searches for Interactions
2015-05-15 Haplin Analyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes
2015-05-15 NEff Calculating Effective Sizes Based on Known Demographic Parameters of a Population
2015-05-15 pmr Probability Models for Ranking Data
2015-05-15 psidR Build Panel Data Sets from PSID Raw Data
2015-05-15 QuasiSeq Analyzing RNA Sequencing Count Tables Using Quasi-Likelihood
2015-05-15 rsem Robust Structural Equation Modeling with Missing Data and Auxiliary Variables
2015-05-15 sdprisk Measures of Risk for the Compound Poisson Risk Process with Diffusion
2015-05-15 virtualspecies Generation of Virtual Species Distributions
2015-05-14 BinaryEPPM Mean and Variance Modeling of Binary Data
2015-05-14 geoscale Geological Time Scale Plotting
2015-05-14 MCTM Markov Chains Transition Matrices
2015-05-13 FeaLect Scores Features for Feature Selection
2015-05-13 gam Generalized Additive Models
2015-05-13 rehh Searching for Footprints of Selection using Haplotype Homozygosity Based Tests
2015-05-13 rglobi R Interface to Global Biotic Interactions
2015-05-13 stackoverflow Stack Overflow's Greatest Hits
2015-05-12 accelerometry Functions for Processing Minute-to-Minute Accelerometer Data
2015-05-12 addreg Additive Regression for Discrete Data
2015-05-12 biclust BiCluster Algorithms
2015-05-12 DSviaDRM Exploring Disease Similarity in Terms of Dysfunctional Regulatory Mechanisms
2015-05-12 fastHICA Hierarchical Independent Component Analysis: a Multi-Scale Sparse Non-Orthogonal Data-Driven Basis
2015-05-12 logbin Relative Risk Regression Using the Log-Binomial Model
2015-05-12 sampSurf Sampling Surface Simulation for Areal Sampling Methods
2015-05-12 ssizeRNA Sample Size Calculation for RNA-Seq Experimental Design
2015-05-12 stagePop Modelling the Population Dynamics of a Stage-Structured Species in Continuous Time
2015-05-11 aster2 Aster Models
2015-05-11 boilerpipeR Interface to the Boilerpipe Java Library
2015-05-11 GB2 Generalized Beta Distribution of the Second Kind: Properties, Likelihood, Estimation
2015-05-11 hapassoc Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm
2015-05-11 install.load Check, Install and Load CRAN & USGS GRAN Packages
2015-05-11 mglmn Model Averaging for Multivariate GLM with Null Models
2015-05-11 plsgenomics PLS Analyses for Genomics
2015-05-11 probFDA Probabilistic Fisher Discriminant Analysis
2015-05-11 RNetCDF Interface to NetCDF Datasets
2015-05-11 RVsharing Probability of Sharing Rare Variants among Relatives
2015-05-11 tm.plugin.webmining Retrieve Structured, Textual Data from Various Web Sources
2015-05-10 csn Closed Skew-Normal Distribution
2015-05-09 aprean3 Datasets from Draper and Smith "Applied Regression Analysis" (3rd Ed., 1998)
2015-05-09 LSAfun Applied Latent Semantic Analysis (LSA) Functions
2015-05-09 StreamMetabolism Calculate Single Station Metabolism from Diurnal Oxygen Curves
2015-05-08 asVPC Average Shifted Visual Predictive Checks
2015-05-08 lsa Latent Semantic Analysis
2015-05-08 powerMediation Power/Sample Size Calculation for Mediation Analysis
2015-05-08 RPEnsemble Random Projection Ensemble Classification
2015-05-07 dummy Automatic Creation of Dummies with Support for Predictive Modeling
2015-05-07 fishmove Prediction of Fish Movement Parameters
2015-05-07 groc Generalized Regression on Orthogonal Components
2015-05-07 helsinki R Tools for Helsinki Open Data
2015-05-07 oro.nifti Rigorous - NIfTI + ANALYZE + AFNI : Input / Output
2015-05-07 RImageJROI Read 'ImageJ' Region of Interest (ROI) Files
2015-05-07 RImpala Using Cloudera 'Impala' Through 'R'
2015-05-06 BCEA Bayesian Cost Effectiveness Analysis
2015-05-06 openNLP Apache OpenNLP Tools Interface
2015-05-06 rioja Analysis of Quaternary Science Data
2015-05-06 robCompositions Robust Estimation for Compositional Data
2015-05-06 Scale Likert Type Questionnaire Item Analysis
2015-05-06 sdcMicroGUI Graphical User Interface for Package 'sdcMicro'
2015-05-05 abc Tools for Approximate Bayesian Computation (ABC)
2015-05-05 abc.data Data Only: Tools for Approximate Bayesian Computation (ABC)
2015-05-05 biwavelet Conduct Univariate and Bivariate Wavelet Analyses
2015-05-05 ebGenotyping Genotyping using Next Generation Sequencing Data
2015-05-05 eha Event History Analysis
2015-05-05 hiertest Convex Hierarchical Testing of Interactions
2015-05-05 labdsv Ordination and Multivariate Analysis for Ecology
2015-05-05 LocFDRPois Functions for Performing Local FDR Estimation when Null and Alternative are Poisson
2015-05-05 mbbefd Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and Destruction Rate Modelling
2015-05-05 numOSL Numeric Routines for Optically Stimulated Luminescence Dating
2015-05-05 optifunset Set Options if Unset
2015-05-05 PCovR Principal Covariates Regression
2015-05-05 pROC Display and Analyze ROC Curves
2015-05-05 qrng (Randomized) Quasi-Random Number Generators
2015-05-05 reGenotyper Detecting Mislabeled Samples in Genetic Data
2015-05-05 structSSI Multiple Testing for Hypotheses with Hierarchical or Group Structure
2015-05-04 clustering.sc.dp Optimal Distance-Based Clustering for Multidimensional Data with Sequential Constraint
2015-05-04 docopt Command-Line Interface Specification Language
2015-05-04 numDeriv Accurate Numerical Derivatives
2015-05-04 parboost Distributed Model-Based Boosting
2015-05-04 PopGenome An Efficient Swiss Army Knife for Population Genomic Analyses
2015-05-04 RANN.L1 Fast Nearest Neighbour Search (Wraps ANN Library) Using L1 Metric
2015-05-04 Rlinkedin Access to the LinkedIn API via R
2015-05-04 s20x Functions for University of Auckland Course STATS 201/208 Data Analysis
2015-05-04 samplesize4surveys Sample Size Calculations for Complex Surveys
2015-05-04 stabledist Stable Distribution Functions
2015-05-03 EW Edgeworth Expansion
2015-05-03 MapGAM Mapping Smoothed Effect Estimates from Individual-Level Data
2015-05-02 coxinterval Cox-Type Models for Interval-Censored Data
2015-05-02 EvalEst Dynamic Systems Estimation - Extensions
2015-05-02 GDAdata Datasets for the Book Graphical Data Analysis with R
2015-05-02 gplots Various R Programming Tools for Plotting Data
2015-05-02 ig.vancouver.2014.topcolour Instagram 2014 Vancouver Top Colour Dataset
2015-05-02 mixtNB DE Analysis of RNA-Seq Data by Mixtures of NB
2015-05-02 MLmetrics Machine Learning Evaluation Metrics
2015-05-02 muir Exploring Data with Tree Data Structures
2015-05-02 survJamda.data Data for Package 'survJambda'
2015-05-02 tidyjson A Grammar for Turning 'JSON' into Tidy Tables
2015-05-02 TSmisc 'TSdbi' Extensions to Wrap Miscellaneous Data Sources
2015-05-01 CDNmoney Components of Canadian Monetary and Credit Aggregates
2015-05-01 Comp2ROC Compare Two ROC Curves that Intersect
2015-05-01 emdbook Support Functions and Data for "Ecological Models and Data"
2015-05-01 greport Graphical Reporting for Clinical Trials
2015-05-01 qte Quantile Treatment Effects
2015-05-01 TScompare 'TSdbi' Database Comparison
2015-05-01 tsfa Time Series Factor Analysis
2015-05-01 uniftest Tests for Uniformity
2015-04-30 bspec Bayesian Spectral Inference
2015-04-30 constrainedKriging Constrained, Covariance-Matching Constrained and Universal Point or Block Kriging
2015-04-30 Rchoice Discrete Choice (Binary, Poisson and Ordered) Models with Random Parameters
2015-04-30 rCMA R-to-Java Interface for 'CMA-ES'
2015-04-30 rowr Row-Based Functions for R Objects
2015-04-30 stringr Simple, Consistent Wrappers for Common String Operations
2015-04-30 TripleR Social Relation Model (SRM) Analyses for Single or Multiple Groups
2015-04-30 TSfame 'TSdbi' Extensions for Fame
2015-04-30 TSMySQL 'TSdbi' Extensions for 'MySQL'
2015-04-30 TSodbc 'TSdbi' Extensions for ODBC
2015-04-30 TSPostgreSQL 'TSdbi' Extensions for 'PostgreSQL'
2015-04-30 TSsql Generic SQL Helper Functions for 'TSdbi' SQL Plugins
2015-04-30 TSSQLite 'TSdbi' Extensions for 'SQLite'
2015-04-29 BCRA Breast Cancer Risk Assessment
2015-04-29 dcemriS4 A Package for Image Analysis of DCE-MRI (S4 Implementation)
2015-04-29 difR Collection of Methods to Detect Dichotomous Differential Item Functioning (DIF)
2015-04-29 fastclime A Fast Solver for Parameterized Linear Programming Problems and Constrained L1 Minimization Approach to Sparse Precision Matrix Estimation
2015-04-29 ForeCA Forecastable Component Analysis
2015-04-29 GlobalFit Bi-Level Optimization of Metabolic Network Models
2015-04-29 GWLelast Geographically Weighted Logistic Elastic Net Regression
2015-04-29 NPMLEcmprsk Type-Specific Failure Rate and Hazard Rate on Competing Risks Data
2015-04-29 PHENIX Phenotypic Integration Index
2015-04-29 replicatedpp2w Two-Way ANOVA-Like Method to Analyze Replicated Point Patterns
2015-04-29 synbreedData Data for the Synbreed Package
2015-04-29 TeachingSampling Selection of Samples and Parameter Estimation in Finite Population
2015-04-29 uniqtag Abbreviate Strings to Short, Unique Identifiers
2015-04-29 XBRL Extraction of Business Financial Information from 'XBRL' Documents
2015-04-28 pairsD3 D3 Scatterplot Matrices
2015-04-28 pgmm Parsimonious Gaussian Mixture Models
2015-04-28 rex Friendly Regular Expressions
2015-04-28 simpleNeural An Easy to Use Multilayer Perceptron
2015-04-28 tframePlus Time Frame Coding Kernel Extensions
2015-04-28 timetree Interface to the TimeTree of Life Webpage
2015-04-27 dynBiplotGUI Full Interactive GUI for Dynamic Biplot in R
2015-04-27 fracprolif Fraction Proliferation via a Quiescent Growth Model
2015-04-27 geophys Geophysics, Continuum Mechanics, Mogi Models, Gravity
2015-04-27 geoRglm A Package for Generalised Linear Spatial Models
2015-04-27 mded Measuring the Difference Between Two Empirical Distributions
2015-04-27 migui Graphical User Interface to the 'mi' Package
2015-04-27 Rquake Seismic Hypocenter Determination
2015-04-27 RTOMO Visualization for Seismic Tomography
2015-04-27 seqDesign Simulation and Group Sequential Monitoring of Randomized Two-Stage Treatment Efficacy Trials with Time-to-Event Endpoints
2015-04-27 SPOT Sequential Parameter Optimization Toolbox
2015-04-27 StatDA Statistical Analysis for Environmental Data
2015-04-27 support.BWS Basic Functions for Supporting an Implementation of Best-Worst Scaling
2015-04-27 sysfonts Loading System Fonts into R
2015-04-27 zoeppritz Seismic Reflection and Scattering Coefficients
2015-04-26 haplotypes Haplotype Inference and Statistical Analysis of Genetic Variation
2015-04-26 Rwave Time-Frequency Analysis of 1-D Signals
2015-04-25 pcaL1 Three L1-Norm PCA Methods
2015-04-24 DiceKriging Kriging Methods for Computer Experiments
2015-04-24 PBSmapping Mapping Fisheries Data and Spatial Analysis Tools
2015-04-24 rfordummies Code Examples to Accompany the Book "R for Dummies"
2015-04-24 tsDyn Nonlinear Time Series Models with Regime Switching
2015-04-23 geoR Analysis of Geostatistical Data
2015-04-23 LinRegInteractive Interactive Interpretation of Linear Regression Models
2015-04-22 effsize Efficient Effect Size Computation
2015-04-22 emg Exponentially Modified Gaussian (EMG) Distribution
2015-04-22 GCD Global Charcoal Database
2015-04-22 gnm Generalized Nonlinear Models
2015-04-22 mapStats Geographic Display of Survey Data Statistics
2015-04-22 markdown 'Markdown' Rendering for R
2015-04-22 probemod Statistical Tools for Probing Moderation Effects
2015-04-22 RadOnc Analytical Tools for Radiation Oncology
2015-04-22 sspse Estimating Hidden Population Size using Respondent Driven Sampling Data
2015-04-22 treeperm Exact and Asymptotic K Sample Permutation Test
2015-04-21 blockmodels Latent and Stochastic Block Model Estimation by a 'V-EM' Algorithm
2015-04-21 DNAprofiles DNA Profiling Evidence Analysis
2015-04-21 ensurer Ensure Values at Runtime
2015-04-21 GENLIB Genealogical Data Analysis
2015-04-21 GUILDS Implementation of Sampling Formulas for the Unified Neutral Model of Biodiversity and Biogeography, with or without Guild Structure
2015-04-21 GWRM Generalized Waring Regression Model for Count Data
2015-04-21 htmlTable Advanced Tables for Markdown/HTML
2015-04-21 indicspecies Relationship Between Species and Groups of Sites
2015-04-21 lmomco L-moments, Censored L-moments, Trimmed L-moments, L-comoments, and Many Distributions
2015-04-21 managelocalrepo Manage a CRAN-Style Local Repository
2015-04-21 R2MLwiN Running 'MLwiN' from Within R
2015-04-21 readGenalex Read, Write, Manipulate and Convert GenAlEx-Format Genotype Files
2015-04-20 bayescount Power Calculations and Bayesian Analysis of Count Distributions and FECRT Data using MCMC
2015-04-20 fscaret Automated Feature Selection from 'caret'
2015-04-20 futile.logger A Logging Utility for R
2015-04-20 highlight Syntax Highlighter
2015-04-20 oro.dicom Rigorous - DICOM Input / Output
2015-04-20 prevalence Tools for Prevalence Assessment Studies
2015-04-20 RANN Fast Nearest Neighbour Search (Wraps Arya and Mount's ANN Library)
2015-04-20 rLiDAR LiDAR Data Processing and Visualization
2015-04-20 solaR Radiation and Photovoltaic Systems
2015-04-20 synRNASeqNet Synthetic RNA-Seq Network Generation and Mutual Information Estimates
2015-04-20 userfriendlyscience Quantitative Analysis Made Accessible
2015-04-19 BNPTSclust A Bayesian Nonparametric Algorithm for Time Series Clustering
2015-04-19 candisc Visualizing Generalized Canonical Discriminant and Canonical Correlation Analysis
2015-04-19 degreenet Models for Skewed Count Distributions Relevant to Networks
2015-04-19 phonR Tools for Phoneticians and Phonologists
2015-04-19 PortfolioAnalytics Portfolio Analysis, Including Numerical Methods for Optimization of Portfolios
2015-04-19 R1magic Compressive Sampling: Sparse Signal Recovery Utilities
2015-04-19 tdr Target Diagram
2015-04-19 WikipediaR R-Based Wikipedia Client
2015-04-18 BivarP Estimating the Parameters of Some Bivariate Distributions
2015-04-18 cna A Package for Coincidence Analysis (CNA)
2015-04-18 daff Diff, Patch and Merge for Data.frames
2015-04-18 datacheck Tools for Checking Data Consistency
2015-04-18 MATA Model-Averaged Tail Area Wald (MATA-Wald) Confidence Interval
2015-04-18 plaqr Partially Linear Additive Quantile Regression
2015-04-18 sprex Calculate Species Richness and Extrapolation Metrics
2015-04-18 TKF Pairwise Distance Estimation with TKF91 and TKF92 Model
2015-04-17 marl Multivariate Analysis Based on Relative Likelihoods
2015-04-17 TDMR Tuned Data Mining in R
2015-04-17 VLMC Variable Length Markov Chains ('VLMC') Models
2015-04-16 copCAR Fitting the copCAR Regression Model for Discrete Areal Data
2015-04-16 dga Capture-Recapture Estimation using Bayesian Model Averaging
2015-04-16 iterpc Efficient Iterator for Permutations and Combinations
2015-04-16 mi Missing Data Imputation and Model Checking
2015-04-16 networksis Simulate Bipartite Graphs with Fixed Marginals Through Sequential Importance Sampling
2015-04-16 qclust Robust Estimation of Gaussian Mixture Models
2015-04-16 smoother Functions Relating to the Smoothing of Numerical Data
2015-04-16 softclassval Soft Classification Performance Measures
2015-04-15 cernn Covariance Estimation Regularized by Nuclear Norm Penalties
2015-04-15 chillR Statistical Methods for Phenology Analysis in Temperate Fruit Trees
2015-04-15 CoClust Copula Based Cluster Analysis
2015-04-15 cold Count Longitudinal Data
2015-04-15 knockoff Knockoff Filter for Controlling the False Discovery Rate
2015-04-15 REST RcmdrPlugin Easy Script Templates
2015-04-15 rmaf Refined Moving Average Filter
2015-04-15 SPRT Wald's Sequential Probability Ratio Test
2015-04-15 survMisc Miscellaneous Functions for Survival Data
2015-04-14 bild BInary Longitudinal Data
2015-04-14 CRTSize Sample Size Estimation Functions for Cluster Randomized Trials
2015-04-14 drc Analysis of Dose-Response Curves
2015-04-14 MissMech Testing Homoscedasticity, Multivariate Normality, and Missing Completely at Random
2015-04-14 readxl Read Excel Files
2015-04-13 apc Age-Period-Cohort Analysis
2015-04-13 fCertificates Basics of Certificates and Structured Products Valuation
2015-04-13 HiLMM Estimation of Heritability in Linear Mixed Models
2015-04-13 inline Functions to Inline C, C++, Fortran Function Calls from R
2015-04-13 L1pack Routines for L1 Estimation
2015-04-13 metacom Analysis of the "Elements of Metacommunity Structure"
2015-04-13 NbClust Determining the Best Number of Clusters in a Data Set
2015-04-13 R2admb 'ADMB' to R Interface Functions
2015-04-13 retrosheet Import Professional Baseball Data from 'Retrosheet'
2015-04-13 rkafka Using Apache 'Kafka' Messaging Queue Through 'R'
2015-04-13 rstackdeque Persistent Fast Amortized Stack and Queue Data Structures
2015-04-13 smds Symbolic Multidimensional Scaling
2015-04-13 subselect Selecting Variable Subsets
2015-04-12 csrplus Methods to Test Hypotheses on the Distribution of Spatial Point Processes
2015-04-12 glmnet Lasso and Elastic-Net Regularized Generalized Linear Models
2015-04-12 heatmap3 An Improved Heatmap Package
2015-04-12 MPV Data Sets from Montgomery, Peck and Vining's Book
2015-04-12 resample Resampling Functions
2015-04-11 fdth Frequency Distribution Tables, Histograms and Polygons
2015-04-11 lvm4net Latent Variable Models for Networks
2015-04-11 msSurv Nonparametric Estimation for Multistate Models
2015-04-10 AID Estimation of Box-Cox Power Transformation Parameter
2015-04-10 BayesLCA Bayesian Latent Class Analysis
2015-04-10 bentcableAR Bent-Cable Regression for Independent Data or Autoregressive Time Series
2015-04-10 chipPCR Toolkit of Helper Functions to Pre-Process Amplification Data
2015-04-10 nnlasso Non-Negative Lasso and Elastic Net Penalized Generalized Linear Models
2015-04-10 pocrm Dose Finding in Drug Combination Phase I Trials Using PO-CRM
2015-04-10 rkafkajars External Jars Required for Package 'rkafka'
2015-04-10 Thermimage Functions for Handling Thermal Images
2015-04-09 denovolyzeR Statistical Analyses of De Novo Genetic Variants
2015-04-09 emov Eye Movement Analysis Package for Fixation and Saccade Detection
2015-04-09 expsmooth Data Sets from "Forecasting with Exponential Smoothing"
2015-04-09 falsy Define Truthy and Falsy Values
2015-04-09 groupRemMap Regularized Multivariate Regression for Identifying Master Predictors Using the GroupRemMap Penalty
2015-04-09 haven Import SPSS, Stata and SAS Files
2015-04-09 isa2 The Iterative Signature Algorithm
2015-04-09 reader Suite of Functions to Flexibly Read Data from Files
2015-04-08 CIDnetworks Generative Models for Complex Networks with Conditionally Independent Dyadic Structure
2015-04-08 ClickClust Model-Based Clustering of Categorical Sequences
2015-04-08 cqrReg Quantile, Composite Quantile Regression and Regularized Versions
2015-04-08 NCmisc Miscellaneous Functions for Creating Adaptive Functions and Scripts
2015-04-08 pendensity Density Estimation with a Penalized Mixture Approach
2015-04-08 PhyloMeasures Fast and Exact Algorithms for Computing Phylogenetic Biodiversity Measures
2015-04-08 RxnSim Functions to Compute Chemical Reaction Similarity
2015-04-08 searchable Tools for Custom Searches / Subsets / Slices of Named R Objects
2015-04-08 softImpute Matrix Completion via Iterative Soft-Thresholded SVD
2015-04-08 TSPred Functions for Baseline-Based Time Series Prediction
2015-04-07 BGLR Bayesian Generalized Linear Regression
2015-04-07 Formula Extended Model Formulas
2015-04-07 gProfileR Interface to the 'g:Profiler' Toolkit
2015-04-07 pssm Piecewise Exponential Model for Time to Progression and Time from Progression to Death
2015-04-07 R2OpenBUGS Running OpenBUGS from R
2015-04-07 StereoMorph Stereo Camera Calibration and Reconstruction
2015-04-06 ngramrr A Simple General Purpose N-Gram Tokenizer
2015-04-06 repfdr Replicability Analysis for Multiple Studies of High Dimension
2015-04-05 mvngGrAd Moving Grid Adjustment in Plant Breeding Field Trials
2015-04-05 RcppRoll Efficient Rolling / Windowed Operations
2015-04-04 EFDR Wavelet-Based Enhanced FDR for Signal Detection in Noisy Images
2015-04-04 ISOcodes Selected ISO Codes
2015-04-04 SOUP Stochastic Ordering Using Permutations (and Pairwise Comparisons)
2015-04-04 timeseriesdb Manage Time Series with R and PostgreSQL
2015-04-03 EcoSimR Null Model Analysis for Ecological Data
2015-04-03 hgm Holonomic Gradient Method and Gradient Descent
2015-04-03 ODMconverter Tools to Convert ODM Files
2015-04-03 relSim Relative Simulator
2015-04-03 RKEA R/KEA Interface
2015-04-03 RKEAjars R/KEA Interface Jars
2015-04-03 thsls Three-Stage Least Squares Estimation for Systems of Simultaneous Equations
2015-04-02 Bmix Bayesian Sampling for Stick-Breaking Mixtures
2015-04-02 DiffCorr Analyzing and Visualizing Differential Correlation Networks in Biological Data
2015-04-02 GPfit Gaussian Processes Modeling
2015-04-02 HighDimOut Outlier Detection Algorithms for High-Dimensional Data
2015-04-02 maptpx MAP Estimation of Topic Models
2015-04-02 MCMC4Extremes Posterior Distribution of Extreme Value Models in R
2015-04-02 mra Analysis of Mark-Recapture Data
2015-04-02 mutoss Unified Multiple Testing Procedures
2015-04-02 PermAlgo Permutational Algorithm to Simulate Survival Data
2015-04-02 Rarity Calculation of Rarity Indices for Species and Assemblages of Species
2015-04-02 sybilccFBA Cost Constrained FLux Balance Analysis: MetabOlic Modeling with ENzyme kineTics (MOMENT)
2015-04-01 gazepath Gazepath Transforms Eye-Tracking Data into Fixations and Saccades
2015-04-01 HarmonicRegression Harmonic Regression to One or more Time Series
2015-04-01 KMDA Kernel-Based Metabolite Differential Analysis
2015-04-01 Laterality Functions to Calculate Common Laterality Statistics in Primatology
2015-04-01 scidb An R Interface to SciDB
2015-04-01 TimeWarp Date Calculations and Manipulation
2015-04-01 track Store Objects on Disk Automatically
2015-03-31 bayesGDS Scalable Rejection Sampling for Bayesian Hierarchical Models
2015-03-31 CARBayesdata Data Sets Used in the Vignette Accompanying the CARBayes Package
2015-03-31 DatABEL File-Based Access to Large Matrices Stored on HDD in Binary Format
2015-03-31 GenSA Functions for Generalized Simulated Annealing
2015-03-31 longclust Model-Based Clustering and Classification for Longitudinal Data
2015-03-31 MatchingFrontier Computation of the Balance - Sample Size Frontier in Matching Methods for Causal Inference
2015-03-31 MethComp Functions for Analysis of Agreement in Method Comparison Studies
2015-03-31 orthogonalsplinebasis Orthogonal B-Spline Basis Functions
2015-03-31 questionr Functions to Make Surveys Processing Easier
2015-03-31 RLumShiny 'Shiny' Applications for the R Package 'Luminescence'
2015-03-31 shinyBS Twitter Bootstrap Components for Shiny
2015-03-30 Ake Associated Kernel Estimations
2015-03-30 ecoengine Programmatic Interface to the API Serving UC Berkeley's Natural History Data
2015-03-30 glinternet Learning Interactions via Hierarchical Group-Lasso Regularization
2015-03-30 RIGHT R Interactive Graphics via HTML
2015-03-30 servr A Simple HTTP Server to Serve Static Files or Dynamic Documents
2015-03-30 TFDEA Technology Forecasting using DEA (Data Envelopment Analysis)
2015-03-30 VdgRsm Plots of Scaled Prediction Variances for Response Surface Designs
2015-03-29 pscl Political Science Computational Laboratory, Stanford University
2015-03-29 Rd2roxygen Convert Rd to Roxygen Documentation
2015-03-28 spgs Statistical Patterns in Genomic Sequences
2015-03-27 AutoSEARCH General-to-Specific (GETS) Modelling
2015-03-27 eurostat Tools for Eurostat Open Data
2015-03-27 LPStimeSeries Learned Pattern Similarity and Representation for Time Series
2015-03-27 miniCRAN Create a Mini Version of CRAN Containing Only Selected Packages
2015-03-27 SAMUR Stochastic Augmentation of Matched Data Using Restriction Methods
2015-03-27 secrdesign Sampling Design for Spatially Explicit Capture-Recapture
2015-03-27 StatMeasures Easy Data Manipulation, Data Quality and Statistical Checks
2015-03-27 UNF Tools for Creating Universal Numeric Fingerprints for Data
2015-03-26 descomponer Seasonal Adjustment by Frequency Analysis
2015-03-26 KappaGUI GUI for Cohen's and Fleiss' Kappa
2015-03-26 kmodR K-Means with Simultaneous Outlier Detection
2015-03-26 ROCR Visualizing the Performance of Scoring Classifiers
2015-03-26 rr Statistical Methods for the Randomized Response Technique
2015-03-26 shinyFiles A Server-Side File System Viewer For Shiny
2015-03-25 flexCWM Flexible Cluster-Weighted Modeling
2015-03-25 investr Inverse Estimation/Calibration Functions
2015-03-25 pheno2geno High-Throughput Generation of Genetic Markers and Maps from Molecular Phenotypes for Crosses Between Inbred Strains
2015-03-25 timeROC Time-Dependent ROC Curve and AUC for Censored Survival Data
2015-03-25 tumblR Access to Tumblr v2 API
2015-03-24 FAwR Functions and Datasets for "Forest Analytics with R"
2015-03-24 mapfit A Tool for PH/MAP Parameter Estimation
2015-03-24 rgexf Build, Import and Export GEXF Graph Files
2015-03-23 Copula.Markov Estimation and Statistical Process Control Under Copula-Based Time Series Models
2015-03-23 measuRing Detection and Control of Tree-Ring Widths on Scanned Image Sections
2015-03-23 mht Multiple Hypothesis Testing for Variable Selection in High-Dimensional Linear Models
2015-03-23 NPBayesImpute Non-Parametric Bayesian Multiple Imputation for Categorical Data
2015-03-23 RSA Response Surface Analysis
2015-03-22 MCS Model Confidence Set Procedure
2015-03-22 psd Adaptive, Sine-Multitaper Power Spectral Density Estimation
2015-03-22 TR8 A Tool for Downloading Functional Traits Data for Plant Species
2015-03-21 mRMRe R package for parallelized mRMR ensemble feature selection
2015-03-20 alphahull Generalization of the Convex Hull of a Sample of Points in the Plane
2015-03-20 flora Tools for Interacting with the Brazilian Flora Checklist
2015-03-20 hierDiversity Hierarchical Multiplicative Partitioning of Complex Phenotypes
2015-03-20 lambda.r Modeling Data with Functional Programming
2015-03-20 LMest Latent Markov Models with and without Covariates
2015-03-20 prais Prais-Winsten Estimation Procedure for AR(1) Serial Correlation
2015-03-20 SAVE Bayesian Emulation, Calibration and Validation of Computer Models
2015-03-19 bisoreg Bayesian Isotonic Regression with Bernstein Polynomials
2015-03-19 eco Ecological Inference in 2x2 Tables
2015-03-19 mcmcplots Create Plots from MCMC Output
2015-03-19 NSM3 Functions and Datasets to Accompany Hollander, Wolfe, and Chicken - Nonparametric Statistical Methods, Third Edition
2015-03-19 rdrobust Robust Data-Driven Statistical Inference in Regression-Discontinuity Designs
2015-03-19 rkt Mann-Kendall Test, Seasonal and Regional Kendall Tests
2015-03-18 BatchExperiments Statistical Experiments on Batch Computing Clusters
2015-03-18 BatchJobs Batch Computing with R
2015-03-18 CARLIT Ecological Quality Ratios Calculation and Plot
2015-03-18 fftwtools Wrapper for FFTW3: Includes 1-D, Univariate and Multivariate, and 2-D Transform
2015-03-18 jtrans Johnson Transformation for Normality
2015-03-18 robumeta Robust Variance Meta-Regression
2015-03-18 saccades Detection of Fixations in Eye-Tracking Data
2015-03-17 atsd Support Querying Axibase Time-Series Database
2015-03-17 BGPhazard Markov Beta and Gamma Processes for Modeling Hazard Rates
2015-03-17 conting Bayesian Analysis of Contingency Tables
2015-03-17 DCluster Functions for the Detection of Spatial Clusters of Diseases
2015-03-17 gmm Generalized Method of Moments and Generalized Empirical Likelihood
2015-03-17 histmdl A Most Informative Histogram-Like Model
2015-03-17 rsatscan Tools, Classes, and Methods for Interfacing with SaTScan Stand-Alone Software
2015-03-17 staTools Statistical Tools for Social Network Analysis
2015-03-17 vcrpart Tree-Based Varying Coefficient Regression for Generalized Linear and Ordinal Mixed Models
2015-03-16 genalg R Based Genetic Algorithm
2015-03-16 gvcm.cat Regularized Categorical Effects/Categorical Effect Modifiers/Continuous/Smooth Effects in GLMs
2015-03-16 PRISMA Protocol Inspection and State Machine Analysis
2015-03-16 ROCS Receiver Operating Characteristics Surface
2015-03-16 survRM2 Comparing Restricted Mean Survival Time
2015-03-16 zoo S3 Infrastructure for Regular and Irregular Time Series (Z's Ordered Observations)
2015-03-15 jmetrik Tools for Interacting with 'jMetrik'
2015-03-15 metaMix Bayesian Mixture Analysis for Metagenomic Community Profiling
2015-03-15 NHPoisson Modelling and Validation of Non Homogeneous Poisson Processes
2015-03-15 separationplot Separation Plots
2015-03-15 tab Functions for Creating Summary Tables for Statistical Reports
2015-03-15 TDboost A Boosted Tweedie Compound Poisson Model
2015-03-14 clusterSim Searching for Optimal Clustering Procedure for a Data Set
2015-03-14 redcapAPI R Interface to REDCap
2015-03-14 scriptests Transcript-Based Unit Tests that are Easy to Create and Maintain
2015-03-14 symbolicDA Analysis of Symbolic Data
2015-03-13 abind Combine Multidimensional Arrays
2015-03-13 alm R Client for the Lagotto Altmetrics Platform
2015-03-13 betas Standardized Beta Coefficients
2015-03-13 bizdays Business Days Calculations and Utilities
2015-03-13 boottol Bootstrap Tolerance Levels for Credit Scoring Validation Statistics
2015-03-13 funFEM Clustering in the Discriminative Functional Subspace
2015-03-13 Holidays Holiday and Half-Day Data, for Use with the 'TimeWarp' Package
2015-03-12 GWAF Genome-Wide Association/Interaction Analysis and Rare Variant Analysis with Family Data
2015-03-12 nparcomp Multiple Comparisons and Simultaneous Confidence Intervals
2015-03-11 blatr Send Emails Using 'Blat' for Windows
2015-03-11 colorspace Color Space Manipulation
2015-03-11 gbm Generalized Boosted Regression Models
2015-03-11 gems Generalized Multistate Simulation Model
2015-03-11 MCL Markov Cluster Algorithm
2015-03-11 multigroup Multigroup Data Analysis
2015-03-11 NORRRM Geochemical Toolkit for R
2015-03-11 seismicRoll Fast Rolling Functions for Seismology using Rcpp
2015-03-11 texmexseq Treatment Effect eXplorer for Microbial Ecology eXperiments (using Sequence Counts)
2015-03-10 bartMachine Bayesian Additive Regression Trees
2015-03-10 binr Cut Numeric Values into Evenly Distributed Groups
2015-03-10 DiceOptim Kriging-Based Optimization for Computer Experiments
2015-03-10 EIAdata R Wrapper for the Energy Information Administration (EIA) API
2015-03-10 lmfor Functions for Forest Biometrics
2015-03-10 mixture Mixture Models for Clustering and Classification
2015-03-10 orca Computation of Graphlet Orbit Counts in Sparse Graphs
2015-03-10 qgraph Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation
2015-03-10 relevent Relational Event Models
2015-03-10 RVFam Rare Variants Association Analyses with Family Data
2015-03-10 showtextdb Font Files for the 'showtext' Package
2015-03-09 C50 C5.0 Decision Trees and Rule-Based Models
2015-03-09 deldir Delaunay Triangulation and Dirichlet (Voronoi) Tessellation
2015-03-09 desirability Desirability Function Optimization and Ranking
2015-03-09 informR Sequence Statistics for Relational Event Models
2015-03-09 SensusR Sensus Analytics
2015-03-09 SGCS Spatial Graph Based Clustering Summaries for Spatial Point Patterns
2015-03-08 csvread Fast Specialized CSV File Loader
2015-03-08 netgsa Network-Based Gene Set Analysis
2015-03-07 SID Structural Intervention Distance
2015-03-07 tm.plugin.lexisnexis Import Articles from LexisNexis Using the tm Text Mining Framework
2015-03-06 alabama Constrained Nonlinear Optimization
2015-03-06 ecospat Spatial Ecology Miscellaneous Methods
2015-03-06 recluster Ordination Methods for the Analysis of Beta-Diversity Indices
2015-03-05 CAM Causal Additive Model (CAM)
2015-03-05 DAMOCLES Dynamic Assembly Model of Colonization, Local Extinction and Speciation
2015-03-05 gtop Game-Theoretically OPtimal (GTOP) Reconciliation Method
2015-03-05 hyperSpec Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...)
2015-03-05 KOGMWU Functional Summary and Meta-Analysis of Gene Expression Data
2015-03-04 abf2 Load Gap-Free Axon ABF2 Files
2015-03-04 bootnet Bootstrap Methods for Various Network Estimation Routines
2015-03-04 clifro Easily Download and Visualise Climate Data from CliFlo
2015-03-04 krm Kernel Based Regression Models
2015-03-04 monreg Nonparametric Monotone Regression
2015-03-04 nCal Nonlinear Calibration
2015-03-04 Newdistns Computes Pdf, Cdf, Quantile and Random Numbers, Measures of Inference for 19 General Families of Distributions
2015-03-04 OceanView Visualisation of Oceanographic Data and Model Output
2015-03-04 rclinicaltrials Download Aggregate Trial Information and Results from ClinicalTrials.gov
2015-03-04 RISmed Download Content from NCBI Databases
2015-03-04 simctest Safe Implementation of Monte Carlo Tests
2015-03-03 BayesSummaryStatLM MCMC Sampling of Bayesian Linear Models via Summary Statistics
2015-03-03 BiSEp Toolkit to Identify Candidate Synthetic Lethality
2015-03-03 BOG Bacterium and Virus Analysis of Orthologous Groups (BOG) is a Package for Identifying Differentially Regulated Genes in the Light of Gene Functions
2015-03-03 coalescentMCMC MCMC Algorithms for the Coalescent
2015-03-03 FieldSim Random Fields (and Bridges) Simulations
2015-03-03 hornpa Horn's (1965) Test to Determine the Number of Components/Factors
2015-03-03 LPTime LP Nonparametric Approach to Non-Gaussian Non-Linear Time Series Modelling
2015-03-03 NAPPA Performs the Processing and Normalisation of Nanostring miRNA and mRNA Data
2015-03-03 NSUM Network Scale Up Method
2015-03-03 RcmdrPlugin.EACSPIR Plugin de R-Commander para el Manual 'EACSPIR'
2015-03-03 rsnps Get SNP (Single-Nucleotide Polymorphism) Data on the Web
2015-03-03 shinythemes Themes for Shiny
2015-03-03 simMSM Simulation of Event Histories for Multi-State Models
2015-03-03 stheoreme Klimontovich's S-Theorem Algorithm Implementation and Data Preparation Tools
2015-03-03 x.ent eXtraction of ENTity
2015-03-02 ggenealogy Visualization Tools for Genealogical Data
2015-03-02 IsingSampler Sampling Methods and Distribution Functions for the Ising Model
2015-03-02 lsr Companion to "Learning Statistics with R"
2015-03-02 PogromcyDanych PogromcyDanych / DataCrunchers is the Masive Online Open Course that Brings R and Statistics to the People
2015-03-02 RobPer Robust Periodogram and Periodicity Detection Methods
2015-03-01 BinNonNor Data Generation with Binary and Continuous Non-Normal Components
2015-03-01 Conake Continuous Associated Kernel Estimation
2015-03-01 emIRT EM Algorithms for Estimating Item Response Theory Models
2015-03-01 FinCovRegularization Covariance Matrix Estimation and Regularization for Finance
2015-03-01 gendata Generate and Modify Synthetic Datasets
2015-03-01 isingLenzMC Monte Carlo for Classical Ising Model
2015-03-01 PoisBinNonNor Data Generation with Poisson, Binary and Continuous Components
2015-03-01 PoisBinOrd Data Generation with Poisson, Binary and Ordinal Components
2015-03-01 XLConnect Excel Connector for R
2015-02-28 laketemps Lake Temperatures Collected by Situ and Satellite Methods from 1985-2009
2015-02-28 R.oo R Object-Oriented Programming with or without References
2015-02-28 sidier Substitution and Indel Distances to Infer Evolutionary Relationships
2015-02-28 timma Target Inhibition Interaction using Maximization and Minimization Averaging
2015-02-27 CoxRidge Cox Models with Dynamic Ridge Penalties
2015-02-27 FindIt Finding Heterogeneous Treatment Effects
2015-02-27 GenForImp The Forward Imputation: A Sequential Distance-Based Approach for Imputing Missing Data
2015-02-27 NormPsy Normalisation of Psychometric Tests
2015-02-26 CNVassoc Association Analysis of CNV Data and Imputed SNPs
2015-02-26 dplRCon Concordance for Dendroclimatology
2015-02-26 exact2x2 Exact Conditional Tests and Confidence Intervals for 2x2 tables
2015-02-26 FuzzyNumbers Tools to Deal with Fuzzy Numbers
2015-02-26 gte Generalized Turnbull's Estimator
2015-02-26 HardyWeinberg Graphical Tests for Hardy-Weinberg Equilibrium
2015-02-26 polyCub Cubature over Polygonal Domains
2015-02-26 PRROC Precision-Recall and ROC Curves for Weighted and Unweighted Data
2015-02-26 RcmdrPlugin.ROC Rcmdr Receiver Operator Characteristic Plug-In PACKAGE
2015-02-26 SurvCorr Correlation of Bivariate Survival Times
2015-02-25 aroma.apd A Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated]
2015-02-25 BoolNet Construction, Simulation and Analysis of Boolean Networks
2015-02-25 FGSG Feature Grouping and Selection Over an Undirected Graph
2015-02-25 GAabbreviate Abbreviating Questionnaires (or Other Measures) Using Genetic Algorithms
2015-02-25 ihs Inverse Hyperbolic Sine Distribution
2015-02-25 momentchi2 Moment-Matching Methods for Weighted Sums of Chi-Squared Random Variables
2015-02-25 multiPIM Variable Importance Analysis with Population Intervention Models
2015-02-25 multitaper Multitaper Spectral Analysis Tools
2015-02-25 SDD Serial Dependence Diagrams
2015-02-24 assist A Suite of R Functions Implementing Spline Smoothing Techniques
2015-02-24 autopls Partial Least Squares Regression with Backward Selection of Predictors
2015-02-24 babar Bayesian Bacterial Growth Curve Analysis in R
2015-02-24 coloredICA Implementation of Colored Independent Component Analysis and Spatial Colored Independent Component Analysis
2015-02-24 CombinS Construction Methods of some Series of PBIB Designs
2015-02-24 coxsei Fitting a CoxSEI Model
2015-02-24 FFD Freedom from Disease
2015-02-24 js Tools for Working with JavaScript in R
2015-02-24 likelihood Methods for Maximum Likelihood Estimation
2015-02-24 mwa Causal Inference in Spatiotemporal Event Data
2015-02-24 phenability Nonparametric Stability Analysis
2015-02-24 speaq Tools for Nuclear Magnetic Resonance Spectrum Alignment and Quantitative Analysis
2015-02-24 SvyNom Nomograms for Right-Censored Outcomes from Survey Designs
2015-02-23 crrstep Stepwise Covariate Selection for the Fine & Gray Competing Risks Regression Model
2015-02-23 games Statistical Estimation of Game-Theoretic Models
2015-02-23 nephro Biostatistics Utilities for Nephrology
2015-02-23 RcppAPT Rcpp Interface to the APT Package Manager
2015-02-23 stocks Fast Functions for Stock Market Analysis
2015-02-23 strataG Summaries and Population Structure Analyses of Haplotypic and Genotypic Data
2015-02-23 SurvLong Analysis of Proportional Hazards Model with Sparse Longitudinal Covariates
2015-02-23 wahc Autocorrelation and Heteroskedasticity Correction in Fixed Effect Panel Data Model
2015-02-23 wmlf Wavelet Leaders in Multifractal Analysis
2015-02-22 AsynchLong Regression Analysis of Sparse Asynchronous Longitudinal Data
2015-02-22 highTtest Simultaneous Critical Values for t-Tests in Very High Dimensions
2015-02-22 protoclust Hierarchical Clustering with Prototypes
2015-02-22 pvrank Rank Correlations
2015-02-22 RDota Data Analysis Toolbox for Dota2
2015-02-22 R.huge Methods for Accessing Huge Amounts of Data [deprecated]
2015-02-22 rpg Easy Interface to Advanced PostgreSQL Features
2015-02-22 ssize.fdr Sample Size Calculations for Microarray Experiments
2015-02-22 syuzhet Extracts Sentiment and Sentiment-Derived Plot Arcs from Text
2015-02-22 TAQMNGR Manage Tick-by-Tick Transaction Data
2015-02-21 frm Regression Analysis of Fractional Responses
2015-02-21 frmhet Regression Analysis of Fractional Responses Under Unobserved Heterogeneity
2015-02-21 Grid2Polygons Convert Spatial Grids to Polygons
2015-02-21 lmeNBBayes Compute the Personalized Activity Index Based on a Flexible Bayesian Negative Binomial Model
2015-02-21 pacman Package Management Tool
2015-02-21 RSurvey Analysis of Spatially Distributed Data
2015-02-20 exactRankTests Exact Distributions for Rank and Permutation Tests
2015-02-20 faisalconjoint Faisal Conjoint Model: A New Approach to Conjoint Analysis
2015-02-20 fastpseudo Fast Pseudo Observations
2015-02-20 msda Multi-Class Sparse Discriminant Analysis
2015-02-20 pullword R Interface to Pullword Service
2015-02-20 R.methodsS3 S3 Methods Simplified
2015-02-20 tseries Time Series Analysis and Computational Finance
2015-02-20 UBCRM Functions to Simulate and Conduct Dose-Escalation Phase I Studies
2015-02-19 bootstrap Functions for the Book "An Introduction to the Bootstrap"
2015-02-19 disparityfilter Disparity Filter Algorithm of Weighted Network
2015-02-19 ega Error Grid Analysis
2015-02-19 fgpt Floating Grid Permutation Technique
2015-02-19 partDSA Partitioning Using Deletion, Substitution, and Addition Moves
2015-02-19 precintcon Precipitation Intensity, Concentration and Anomaly Analysis
2015-02-19 Simile Interact with Simile Models
2015-02-18 clues Clustering Method Based on Local Shrinking
2015-02-18 clusterGeneration Random Cluster Generation (with Specified Degree of Separation)
2015-02-18 frmpd Regression Analysis of Panel Fractional Responses
2015-02-18 lbfgsb3 Limited Memory BFGS Minimizer with Bounds on Parameters
2015-02-18 MortalitySmooth Smoothing and Forecasting Poisson Counts with P-Splines
2015-02-18 oaxaca Blinder-Oaxaca Decomposition
2015-02-18 PST Probabilistic Suffix Trees and Variable Length Markov Chains
2015-02-18 rjade A Clean, Whitespace-Sensitive Template Language for Writing HTML
2015-02-18 semsfa Semiparametric Estimation of Stochastic Frontier Models
2015-02-17 analyz Model Layer for Automatic Data Analysis via CSV File Interpretation
2015-02-17 ATE Inference for Average Treatment Effects using Covariate Balancing
2015-02-17 eegkit Toolkit for Electroencephalography Data
2015-02-17 fastcluster Fast Hierarchical Clustering Routines for R and Python
2015-02-17 GaDiFPT First Passage Time Simulation for Gaussian Diffusion Processes
2015-02-17 gWidgets2RGtk2 Implementation of gWidgets2 for the RGtk2 Package
2015-02-17 hpcwld High Performance Cluster Models Based on Kiefer-Wolfowitz Recursion
2015-02-17 IBDhaploRtools Functions for the Analysis of IBD Haplo Output
2015-02-17 IBDLabels Convert Between Different IBD-State Labelling Schemes
2015-02-17 multisensi Multivariate Sensitivity Analysis
2015-02-17 palaeoSig Significance Tests for Palaeoenvironmental Reconstructions
2015-02-16 bde Bounded Density Estimation
2015-02-16 FDboost Boosting Functional Regression Models
2015-02-16 fdrDiscreteNull False Discovery Rate Procedure Under Discrete Null Distributions
2015-02-16 glba General Linear Ballistic Accumulator Models
2015-02-16 LPS Linear Predictor Score, for Binary Inference from Multiple Continuous Variables
2015-02-16 PCIT Partial Correlation Coefficient with Information Theory
2015-02-16 qrNLMM Quantile Regression for Nonlinear Mixed-Effects Models
2015-02-16 R4CouchDB An R Convenience Layer for CouchDB
2015-02-16 ramps Bayesian Geostatistical Modeling with RAMPS
2015-02-16 randomUniformForest Random Uniform Forests for Classification, Regression and Unsupervised Learning
2015-02-16 retistruct Retinal Reconstruction Program
2015-02-16 saeSim Simulation Tools for Small Area Estimation
2015-02-16 SCGLR Supervised Component Generalized Linear Regression
2015-02-16 sybilEFBA Using Gene Expression Data to Improve Flux Balance Analysis Predictions
2015-02-16 wbs Wild Binary Segmentation for Multiple Change-Point Detection
2015-02-15 MultiLCIRT Multidimensional Latent Class Item Response Theory Models
2015-02-15 nFCA Numerical Formal Concept Analysis for Systematic Clustering
2015-02-15 sapa Spectral Analysis for Physical Applications
2015-02-15 sparseBC Sparse Biclustering of Transposable Data
2015-02-15 ztable Zebra-Striped Tables in LaTeX and HTML Formats
2015-02-14 BayesBridge Bridge Regression
2015-02-14 minimist Parse Argument Options
2015-02-14 moonBook Functions and Datasets for the Book by Keon-Woong Moon
2015-02-14 phytotools Phytoplankton Production Tools
2015-02-14 Rborist Extensible, Parallelizable Implementation of the Random Forest Algorithm
2015-02-13 demi Differential Expression from Multiple Indicators
2015-02-13 eggCounts Hierarchical Modelling of Faecal Egg Counts
2015-02-13 plotGoogleMaps Plot Spatial or Spatio-Temporal Data Over Google Maps
2015-02-13 ROAuth R Interface For OAuth
2015-02-13 rockchalk Regression Estimation and Presentation
2015-02-13 shinyTree jsTree Bindings for Shiny
2015-02-13 tbart Teitz and Bart's p-Median Algorithm
2015-02-13 unittest TAP-Compliant Unit Testing
2015-02-12 FastKNN Fast k-Nearest Neighbors
2015-02-12 gaselect Genetic Algorithm (GA) for Variable Selection from High-Dimensional Data
2015-02-12 kselection Selection of K in K-Means Clustering
2015-02-12 MTS All-Purpose Toolkit for Analyzing Multivariate Time Series (MTS) and Estimating Multivariate Volatility Models
2015-02-12 poplite Tools for Simplifying the Population and Querying of SQLite Databases
2015-02-12 sgof Multiple Hypothesis Testing
2015-02-12 vows Voxelwise Semiparametrics
2015-02-11 ARPobservation Tools for Simulating Direct Behavioral Observation Recording Procedures Based on Alternating Renewal Processes
2015-02-11 Ckmeans.1d.dp Optimal k-Means Clustering for One-Dimensional Data
2015-02-11 condMVNorm Conditional Multivariate Normal Distribution
2015-02-11 presens R Interface for PreSens Fiber Optic Data
2015-02-11 rNMF Robust Nonnegative Matrix Factorization
2015-02-11 shinybootstrap2 Bootstrap 2 Web Components for Use with Shiny
2015-02-11 tmg Truncated Multivariate Gaussian Sampling
2015-02-11 treelet An Adaptive Multi-Scale Basis for High-Dimensional, Sparse and Unordered Data
2015-02-11 tscount Analysis of Count Time Series
2015-02-10 cccp Cone Constrained Convex Problems
2015-02-10 heritability Marker-Based Estimation of Heritability Using Individual Plant or Plot Data
2015-02-10 HSROC Meta-Analysis of Diagnostic Test Accuracy when Reference Test is Imperfect
2015-02-10 ICAFF Imperialist Competitive Algorithm
2015-02-10 kSamples K-Sample Rank Tests and their Combinations
2015-02-10 lmm Linear Mixed Models
2015-02-10 MSBVAR Markov-Switching, Bayesian, Vector Autoregression Models
2015-02-10 pan Multiple Imputation for Multivariate Panel or Clustered Data
2015-02-10 RInSp R Individual Specialization (RInSp)
2015-02-10 SoftClustering Soft Clustering Algorithms
2015-02-10 tau Text Analysis Utilities
2015-02-10 VNM Using V-algorithm and Newton-Raphson Method to Obtain Multiple-objective Optimal Design
2015-02-09 BradleyTerry2 Bradley-Terry Models
2015-02-09 excursions Excursion Sets and Contour Credibility Regions for Random Fields
2015-02-09 ivpanel Instrumental Panel Data Models
2015-02-09 LARF Local Average Response Functions for Instrumental Variable Estimation of Treatment Effects
2015-02-09 RPushbullet R Interface to the Pushbullet Messaging Service
2015-02-09 rtfbs Transcription Factor Binding Site Identification Tool
2015-02-08 cec2005benchmark Benchmark for the CEC 2005 Special Session on Real-Parameter Optimization
2015-02-08 MetNorm Statistical Methods for Normalizing Metabolomics Data
2015-02-08 RcppMLPACK Rcpp Integration for MLPACK Library
2015-02-08 SVMMatch Causal Effect Estimation and Diagnostics with Support Vector Machines
2015-02-07 klausuR Multiple Choice Test Evaluation
2015-02-07 Sabermetrics Sabermetrics Functions For Baseball Analytics
2015-02-06 FCMapper Fuzzy Cognitive Mapping
2015-02-06 knncat Nearest-neighbor Classification with Categorical Variables
2015-02-06 micromap Linked Micromap Plots
2015-02-06 PANICr PANIC Tests of Nonstationarity
2015-02-06 PoisNonNor Simultaneous Generation of Count and Continuous Data
2015-02-06 robustloggamma Robust estimation of the generalized log gamma model
2015-02-06 SimilarityMeasures Trajectory Similarity Measures
2015-02-06 sparseMVN Multivariate Normal Functions for Sparse Covariance and Precision Matrices
2015-02-06 TableMonster Table Monster
2015-02-06 varComp Variance Component Models
2015-02-05 BayesMed Default Bayesian Hypothesis Tests for Correlation, Partial Correlation, and Mediation
2015-02-05 emplik2 Empirical Likelihood Ratio Test for Two Samples with Censored Data
2015-02-05 fdatest Interval Testing Procedure for Functional Data
2015-02-05 mada Meta-Analysis of Diagnostic Accuracy
2015-02-05 svKomodo SciViews GUI API - Functions to interface with Komodo Edit/IDE
2015-02-04 BLCOP Black-Litterman and Copula Opinion Pooling Frameworks
2015-02-04 catnet Categorical Bayesian Network Inference
2015-02-04 GeneticTools Collection of Genetic Data Analysis Tools
2015-02-04 LiblineaR Linear Predictive Models Based on the LIBLINEAR C/C++ Library
2015-02-04 miscFuncs Miscellaneous Useful Functions
2015-02-04 pamctdp Principal Axes Methods for Contingency Tables with Partition Structures on Rows and Columns
2015-02-04 partialAR Partial Autoregression
2015-02-04 sparseHessianFD Numerical Estimation of Sparse Hessians
2015-02-04 statcheck Extract Statistics from Articles and Recompute P Values
2015-02-04 Tides Quasi-Periodic Time Series Characteristics
2015-02-04 trustOptim Trust Region Optimization for Nonlinear Functions with Sparse Hessians
2015-02-03 AncestryMapper Assigning Ancestry Based on Population References
2015-02-03 BBmisc Miscellaneous Helper Functions for B. Bischl
2015-02-03 BinOrdNonNor Concurrent Generation of Binary, Ordinal and Continuous Data
2015-02-03 CEC Cross-Entropy Clustering
2015-02-03 DetMCD DetMCD Algorithm (Robust and Deterministic Estimation of Location and Scatter)
2015-02-03 distrDoc Documentation for Packages distr, distrEx, distrSim, distrTEst, distrTeach, distrMod, and distrEllipse
2015-02-03 gamlss.tr Generating and fitting truncated (gamlss.family) distributions
2015-02-03 gamlss.util GAMLSS Utilities
2015-02-03 MatrixEQTL Matrix eQTL: Ultra fast eQTL analysis via large matrix operations
2015-02-03 poisDoubleSamp Confidence Intervals with Poisson Double Sampling
2015-02-03 qvcalc Quasi Variances for Factor Effects in Statistical Models
2015-02-03 RcmdrPlugin.survival R Commander Plug-in for the survival Package
2015-02-03 relimp Relative Contribution of Effects in a Regression Model
2015-02-03 RPPairwiseDesign Resolvable partially pairwise balanced design and Space-filling design via association scheme
2015-02-02 lmeNB Compute the Personalized Activity Index Based on a Negative Binomial Model
2015-02-02 lmom L-moments
2015-02-02 lmomRFA Regional frequency analysis using L-moments
2015-02-02 multicon Multivariate Constructs
2015-02-02 royston Royston's H Test: Multivariate Normality Test
2015-02-02 Rsampletrees Sampletrees Input/Output Processing
2015-02-02 SETPath Spiked Eigenvalue Test for Pathway data
2015-02-02 tripEstimation Metropolis Sampler and Supporting Functions for Estimating Animal Movement from Archival Tags and Satellite Fixes
2015-02-02 twang Toolkit for Weighting and Analysis of Nonequivalent Groups
2015-02-01 birk MA Birk's Functions
2015-02-01 CompRandFld Composite-Likelihood Based Analysis of Random Fields
2015-02-01 DFIT Differential Functioning of Items and Tests
2015-02-01 GWmodel Geographically-Weighted Models
2015-02-01 hbm Hierarchical Block Matrix Analysis
2015-01-31 BayesCR Bayesian Analysis of Censored Regression Models Under Scale Mixture of Skew Normal Distributions
2015-01-31 d3Network Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R
2015-01-31 infra An Infrastructure Proxy Function
2015-01-31 LMERConvenienceFunctions Model Selection and Post-hoc Analysis for (G)LMER Models
2015-01-31 multiAssetOptions Finite Difference Method for Multi-Asset Option Valuation
2015-01-31 RcppStreams Rcpp Integration of the Streamulus DSEL for Stream Processing
2015-01-30 brewdata Extracting Usable Data from the Grad Cafe Results Search
2015-01-30 kissmig a Keep It Simple Species Migration Model
2015-01-30 mvoutlier Multivariate outlier detection based on robust methods
2015-01-30 ppmlasso Point Process Models with LASSO Penalties
2015-01-30 SmarterPoland Tools for Accessing Various Datasets Developed by the Foundation SmarterPoland.pl
2015-01-29 cchs Cox Model for Case-Cohort Data with Stratified Subcohort-Selection
2015-01-29 devEMF EMF Graphics Output Device
2015-01-29 mousetrack Mouse-Tracking Measures from Trajectory Data
2015-01-29 portfolio Analysing equity portfolios
2015-01-29 roughrf Roughened Random Forests for Binary Classification
2015-01-28 ald The Asymmetric Laplace Distribution
2015-01-28 compareC Compare Two Correlated C Indices with Right-censored Survival Outcome
2015-01-28 CpGassoc Association Between Methylation and a Phenotype of Interest
2015-01-28 flower Tools for characterizing flowering traits
2015-01-28 KFKSDS Kalman Filter, Smoother and Disturbance Smoother
2015-01-28 LaF Fast access to large ASCII files
2015-01-28 MarkowitzR Statistical Significance of the Markowitz Portfolio
2015-01-28 metaMA Meta-analysis for MicroArrays
2015-01-28 RWeka R/Weka interface
2015-01-28 RWekajars R/Weka interface jars
2015-01-28 SLHD Maximin-Distance (Sliced) Latin Hypercube Designs
2015-01-28 SMNCensReg Fitting Univariate Censored Regression Model Under the Family of Scale Mixture of Normal Distributions
2015-01-27 cope Coverage Probability Excursion (CoPE) Sets
2015-01-27 FeedbackTS Analysis of Feedback in Time Series
2015-01-27 geoCount Analysis and Modeling for Geostatistical Count Data
2015-01-27 HMR Flux Estimation with Static Chamber Data
2015-01-27 MaxPro Maximum Projection Designs
2015-01-27 msarc Draw Diagrams (mis)Representing the Results of Mass Spec Experiments
2015-01-27 munfold Metric Unfolding
2015-01-27 mvnpermute Generate New Multivariate Normal Samples from Permutations
2015-01-27 qrLMM Quantile Regression for Linear Mixed-Effects Models
2015-01-27 quantification Quantification of Qualitative Survey Data
2015-01-27 RcmdrPlugin.SCDA Rcmdr Plugin for Designing and Analyzing Single-case Experiments
2015-01-27 reldist Relative Distribution Methods
2015-01-27 SCMA Single-Case Meta-Analysis
2015-01-27 SCRT Single-Case Randomization Tests
2015-01-27 SCVA Single-Case Visual Analysis
2015-01-27 spBayes Univariate and Multivariate Spatial-temporal Modeling
2015-01-27 tsoutliers Detection of Outliers in Time Series
2015-01-27 tufterhandout Tufte-style html document format for rmarkdown
2015-01-26 BayesVarSel Bayes Factors, Model Choice And Variable Selection In Linear Models
2015-01-26 Disake Discrete associated kernel estimators
2015-01-26 metaRNASeq Meta-analysis of RNA-seq data
2015-01-26 R2BayesX Estimate Structured Additive Regression Models with BayesX
2015-01-26 sae2 Small Area Estimation: Time-series Models
2015-01-26 stsm Structural Time Series Models
2015-01-25 RegressionFactory Expander Functions for Generating Full Gradient and Hessian from Single- and Multi-Slot Base Distributions
2015-01-25 spate Spatio-Temporal Modeling of Large Data Using a Spectral SPDE Approach
2015-01-24 CensRegMod Fits Normal and Student-t Censored Regression Model
2015-01-23 grplasso Fitting user specified models with Group Lasso penalty
2015-01-23 hysteresis Tools for Modeling Rate-Dependent Hysteretic Processes and Ellipses
2015-01-23 pbivnorm Vectorized Bivariate Normal CDF
2015-01-23 PBSmodelling GUI Tools Made Easy: Interact with Models and Explore Data
2015-01-23 remMap Regularized Multivariate Regression for Identifying Master Predictors
2015-01-23 timeDate Rmetrics - Chronological and Calendar Objects
2015-01-22 cec2013 Benchmark functions for the Special Session and Competition on Real-Parameter Single Objective Optimization at CEC-2013
2015-01-22 ESEA ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis
2015-01-22 micromapST Linked Micromap Plots for U. S. States
2015-01-22 sig Print Function Signatures
2015-01-22 timeordered Time-ordered and time-aggregated network analyses
2015-01-22 wesanderson A Wes Anderson Palette Generator
2015-01-21 ArfimaMLM Arfima-MLM Estimation For Repeated Cross-Sectional Data
2015-01-21 conformal Conformal Prediction for Regression and Classification
2015-01-21 coxphf Cox regression with Firth's penalized likelihood
2015-01-21 D2C Predicting Causal Direction from Dependency Features
2015-01-21 drmdel Dual Empirical Likelihood Inference under Density Ratio Models in the Presence of Multiple Samples
2015-01-21 gammSlice Generalized additive mixed model analysis via slice sampling
2015-01-21 ggm Functions for graphical Markov models
2015-01-21 hht The Hilbert-Huang Transform: Tools and Methods
2015-01-21 loa Various Options and Add-ins for Lattice
2015-01-21 MenuCollection Collection of Configurable GTK+ Menus
2015-01-21 MODISTools MODIS Subsetting Tools
2015-01-21 RgoogleMaps Overlays on Google map tiles in R
2015-01-20 psychotools Infrastructure for Psychometric Modeling
2015-01-20 psychotree Recursive Partitioning Based on Psychometric Models
2015-01-20 snpRF Random Forest for SNPs to Prevent X-chromosome SNP Importance Bias
2015-01-19 gsw Gibbs Sea Water Functions
2015-01-19 imputeLCMD A collection of methods for left-censored missing data imputation
2015-01-19 INLABMA Bayesian Model Averaging with INLA
2015-01-18 hddtools Hydrological Data Discovery Tools
2015-01-18 survSNP Power Calculations for SNP Studies with Censored Outcomes
2015-01-17 flexmix Flexible Mixture Modeling
2015-01-17 HTMLUtils Facilitates Automated HTML Report Creation
2015-01-17 nontarget Detecting, Combining and Filtering Isotope, Adduct and Homologue Series Relations in High-Resolution Mass Spectrometry (HRMS) Data
2015-01-17 rAverage Parameter estimation for the averaging model of Information Integration Theory
2015-01-16 AICcmodavg Model Selection and Multimodel Inference Based on (Q)AIC(c)
2015-01-16 anfis Adaptive Neuro Fuzzy Inference System in R
2015-01-16 batchmeans Consistent Batch Means Estimation of Monte Carlo Standard Errors
2015-01-16 caretEnsemble Ensembles of Caret Models
2015-01-16 chemometrics Multivariate Statistical Analysis in Chemometrics
2015-01-16 fwsim Fisher-Wright Population Simulation
2015-01-16 latdiag Draws diagrams useful for checking latent scales
2015-01-16 longpower Sample size calculations for longitudinal data
2015-01-16 ngspatial Fitting the centered autologistic and sparse spatial generalized linear mixed models for areal data
2015-01-16 OrdinalLogisticBiplot Biplot representations of ordinal variables
2015-01-16 pearson7 Maximum Likelihood Inference for the Pearson VII Distribution with Shape Parameter 3/2
2015-01-16 sphet Estimation of spatial autoregressive models with and without heteroskedastic innovations
2015-01-15 bgeva Binary Generalized Extreme Value Additive Models
2015-01-15 bmrm Bundle Methods for Regularized Risk Minimization Package
2015-01-15 cmm Categorical Marginal Models
2015-01-15 COPASutils Tools for processing COPAS large-particle flow cytometer data
2015-01-15 EMP Expected Maximum Profit Classification Performance Measure
2015-01-15 mixer Random graph clustering
2015-01-15 MultiMeta Meta-analysis of Multivariate Genome Wide Association Studies
2015-01-14 ASPBay Bayesian Inference on Causal Genetic Variants using Affected Sib-Pairs Data
2015-01-14 HiDimMaxStable Inference on High Dimensional Max-Stable Distributions
2015-01-14 mailR A Utility to Send Emails from R
2015-01-14 mztwinreg Regression Models for Monozygotic Twin Data
2015-01-14 prabclus Functions for Clustering of Presence-Absence, Abundance and Multilocus Genetic Data
2015-01-14 robustDA Robust Mixture Discriminant Analysis
2015-01-14 rphast Interface to PHAST Software for Comparative Genomics
2015-01-14 spnet Plotting (social) networks on maps
2015-01-14 SPODT Spatial Oblique Decision Tree
2015-01-14 stratigraph Toolkit for the plotting and analysis of stratigraphic and palaeontological data
2015-01-14 WCE Weighted Cumulative Exposure Models
2015-01-13 ads Spatial point patterns analysis
2015-01-13 bigrquery An Interface to Google's BigQuery API
2015-01-13 chromer Interface to Chromosome Counts Database API
2015-01-13 dst Using Dempster-Shafer Theory
2015-01-13 FACTscorer Scores the FACT and FACIT Family of Patient-Reported Outcome Measures
2015-01-13 fsia Import and Analysis of OMR Data from FormScanner
2015-01-13 HierO A graphical user interface for calculating power and sample size for hierarchical data
2015-01-13 hwwntest Tests of White Noise using Wavelets
2015-01-13 MBmca Nucleic Acid Melting Curve Analysis on Microbead Surfaces with R
2015-01-13 PCPS Principal Coordinates of Phylogenetic Structure
2015-01-13 RCALI Calculation of the Integrated Flow of Particles between Polygons
2015-01-13 readMLData Reading Machine Learning Benchmark Data Sets in Different Formats
2015-01-13 Rttf2pt1 Package for ttf2pt1 program
2015-01-13 Sunder Quantification of the effect of geographic versus environmental isolation on genetic differentiation
2015-01-13 traj Trajectory Analysis
2015-01-12 classyfire Robust multivariate classification using highly optimised SVM ensembles
2015-01-12 CNOGpro Copy Numbers of Genes in prokaryotes
2015-01-12 DEEPR Dirichlet-multinomial Evolutionary Event Profile Randomization (DEEPR) test
2015-01-12 Geneland Detection of structure from multilocus genetic data
2015-01-12 HomoPolymer Theoretical Model to Simulate Radical Polymerization
2015-01-12 penMSM Estimating Regularized Multi-state Models Using L1 Penalties
2015-01-12 secrlinear Spatially Explicit Capture-Recapture for Linear Habitats
2015-01-12 stabs Stability Selection with Error Control
2015-01-11 leiv Bivariate Linear Errors-In-Variables Estimation
2015-01-11 neldermead R port of the Scilab neldermead module
2015-01-10 aoristic aoristic analysis with spatial output (kml)
2015-01-10 ctv CRAN Task Views
2015-01-10 hsphase Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data
2015-01-10 MNM Multivariate Nonparametric Methods. An Approach Based on Spatial Signs and Ranks
2015-01-10 neuRosim Functions to Generate fMRI Data Including Activated Data, Noise Data and Resting State Data
2015-01-10 RcppClassic Deprecated 'classic' Rcpp API
2015-01-10 RFmarkerDetector Multivariate Analysis of Metabolomics Data using Random Forests
2015-01-10 waveslim Basic wavelet routines for one-, two- and three-dimensional signal processing
2015-01-09 blockTools Block, Assign, and Diagnose Potential Interference in Randomized Experiments
2015-01-09 DEoptim Global Optimization by Differential Evolution
2015-01-09 LSD Lots of Superior Depictions
2015-01-09 pvar Calculation and Application of p-variation
2015-01-09 randomizationInference Flexible Randomization-Based Inference
2015-01-09 RcppProgress An Interruptible Progress Bar with OpenMP Support for C++ in R Packages
2015-01-09 textometry Textual Data Analysis Package used by the TXM Software
2015-01-08 brnn brnn (Bayesian regularization for feed-forward neural networks)
2015-01-08 interferenceCI Exact Confidence Intervals in the Presence of Interference
2015-01-08 io A Unified Framework for Input-Output Operations in R
2015-01-08 noia Implementation of the Natural and Orthogonal InterAction (NOIA) model
2015-01-08 sra Selection Response Analysis
2015-01-07 BEQI2 Benthic Ecosystem Quality Index 2
2015-01-07 cudaBayesreg CUDA Parallel Implementation of a Bayesian Multilevel Model for fMRI Data Analysis
2015-01-07 eaf Plots of the Empirical Attainment Function
2015-01-07 FastPCS FastPCS Robust Fit of Multivariate Location and Scatter
2015-01-07 gdimap Generalized Diffusion Magnetic Resonance Imaging
2015-01-07 glpkAPI R Interface to C API of GLPK
2015-01-07 mwaved Multichannel Wavelet Deconvolution with Additive Long Memory Noise
2015-01-07 RGENERATEPREC Tools To Generate Daily-Precipitation Time Series
2015-01-07 tsc Likelihood-ratio Tests for Two-Sample Comparisons
2015-01-06 DAMisc Dave Armstrong's Miscellaneous Functions
2015-01-06 gWidgets2tcltk Toolkit Implementation of gWidgets2 for tcltk
2015-01-06 medicalrisk Medical Risk and Comorbidity Tools for ICD-9-CM Data
2015-01-06 physiology Calculate Physiological Characteristics of Adults and Children
2015-01-06 RcppCNPy Read-Write Support for NumPy Files via Rcpp
2015-01-05 CorrBin Nonparametrics with Clustered Binary and Multinomial Data
2015-01-05 DistributionUtils Distribution Utilities
2015-01-05 EnsembleBase Extensible Package for Parallel, Batch Training of Base Learners for Ensemble Modeling
2015-01-05 GeneralizedHyperbolic The Generalized Hyperbolic Distribution
2015-01-05 hwriterPlus hwriterPlus: Extending the hwriter Package
2015-01-05 moments Moments, cumulants, skewness, kurtosis and related tests
2015-01-05 mritc MRI Tissue Classification
2015-01-05 NormalLaplace The Normal Laplace Distribution
2015-01-05 RadTran Radon and Soil Gas Transport in 2D Porous Medium
2015-01-05 RGENERATE Tools To Generate Vector Time Series
2015-01-05 SCEPtER Stellar CharactEristics Pisa Estimation gRid
2015-01-05 SkewHyperbolic The Skew Hyperbolic Student t-Distribution
2015-01-05 TH.data TH's Data Archive
2015-01-05 VarianceGamma The Variance Gamma Distribution
2015-01-04 AnglerCreelSurveySimulation Simulate a Bus Route Creel Survey of Anglers
2015-01-04 EntropyEstimation Estimation of Entropy and Related Quantities
2015-01-04 intReg Interval Regression
2015-01-04 jiebaRD Chinese Text Segmentation Data for jiebaR Package
2015-01-04 rUnemploymentData Data and Functions for USA State and County Unemployment Data
2015-01-04 swirl Learn R, in R
2015-01-04 ThreeArmedTrials Design and Analysis of Clinical Non-inferiority or Superiority Trials with Active and Placebo Control
2015-01-03 PivotalR A Fast, Easy-to-use Tool for Manipulating Tables in Databases and A Wrapper of MADlib
2015-01-02 dropR Analyze Drop Out of an Experiment or Survey
2015-01-02 ForImp Imputation of Missing Values Through a Forward Imputation Algorithm
2015-01-02 lazyeval Lazy (Non-Standard) Evaluation
2015-01-02 TreePar Estimating birth and death rates based on phylogenies
2015-01-01 EnsembleCV Extensible Package for Cross-Validation-Based Integration of Base Learners
2015-01-01 glrt Generalized Logrank Tests for Interval-censored Failure Time Data
2015-01-01 msBP Multiscale Bernstein Polynomials for Densities
2015-01-01 Storm Write Storm Bolts in R using the Storm Multi-Language Protocol
2014-12-31 bibtex bibtex parser
2014-12-31 ca Simple, Multiple and Joint Correspondence Analysis
2014-12-31 CNprep Pre-process DNA Copy Number (CN) Data for Detection of CN Events
2014-12-31 digitalPCR Estimate copy number for digital PCR
2014-12-31 Quor Quantile Ordering
2014-12-31 RAMP Regularized Generalized Linear Models with Interaction Effects
2014-12-31 spMC Continuous-Lag Spatial Markov Chains
2014-12-31 YaleToolkit Data exploration tools from Yale University
2014-12-30 BCDating Business Cycle Dating and Plotting Tools
2014-12-30 CORE Cores of Recurrent Events
2014-12-30 ParDNAcopy Parallel implementation of the "segment" function of package "DNAcopy"
2014-12-30 TBSSurvival Survival Analysis using a Transform-Both-Sides model
2014-12-29 countrycode Convert Country Names and Country Codes
2014-12-29 diffEq Functions from the book Solving Differential Equations in R
2014-12-29 dupiR Bayesian inference from count data using discrete uniform priors
2014-12-29 ecolMod "A practical guide to ecological modelling - using R as a simulation platform"
2014-12-29 metabolomics Analysis of Metabolomics Data
2014-12-29 raters A Modification of Fleiss' Kappa in Case of Nominal and Ordinal Variables
2014-12-29 selectiongain A tool for calculation and optimization of the expected gain from multi-stage selection
2014-12-29 TBEST Tree Branches Evaluated Statistically for Tightness
2014-12-29 usl Analyze System Scalability with the Universal Scalability Law
2014-12-28 BNDataGenerator Data Generator based on Bayesian Network Model
2014-12-28 lm.beta Add Standardized Regression Coefficients to lm-Objects
2014-12-28 rmngb Miscellaneous Collection of Functions for Medical Data Analysis
2014-12-28 rneos rneos: XML-RPC Interface to NEOS
2014-12-27 extraTrees Extremely Randomized Trees (ExtraTrees) Method for Classification and Regression
2014-12-26 LIM Linear Inverse Model examples and solution methods
2014-12-26 NetIndices Estimating network indices, including trophic structure of foodwebs in R
2014-12-26 RConics Computations on Conics
2014-12-26 ReacTran Reactive transport modelling in 1D, 2D and 3D
2014-12-26 Statomica Statomica utility package
2014-12-24 additivityTests Additivity Tests in the Two Way Anova with Single Sub-class Numbers
2014-12-24 BayClone2 Bayesian Feature Allocation Model for Tumor Heterogeneity
2014-12-24 historydata Data Sets for Historians
2014-12-24 ismev An Introduction to Statistical Modeling of Extreme Values
2014-12-24 manipulate Interactive Plots for RStudio
2014-12-24 OutlierDM Outlier Detection for Multi-replicated High-throughput Data
2014-12-24 OutrankingTools Functions for Solving Multiple-criteria Decision-making Problems
2014-12-24 pbdSLAP Programming with Big Data – Scalable Linear Algebra Packages
2014-12-24 selectr Translate CSS Selectors to XPath Expressions
2014-12-23 KrigInv Kriging-based Inversion for Deterministic and Noisy Computer Experiments
2014-12-23 StratSel Strategic Selection Estimator
2014-12-22 convevol Quantifies and assesses the significance of convergent evolution
2014-12-22 depmix Dependent Mixture Models
2014-12-22 graphicsQC Quality Control for Graphics in R
2014-12-22 MAd Meta-Analysis with Mean Differences
2014-12-22 mhsmm Inference for Hidden Markov and Semi-Markov Models
2014-12-22 MPDiR Data sets and scripts for Modeling Psychophysical Data in R
2014-12-21 aplore3 Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic Regression" (3rd ed.)
2014-12-21 PredictABEL Assessment of Risk Prediction Models
2014-12-21 qmrparser Parser combinator in R
2014-12-21 reports Assist the Workflow of Writing Academic Articles and Other Reports
2014-12-21 spfrontier Spatial Stochastic Frontier models estimation
2014-12-20 doMPI Foreach parallel adaptor for the Rmpi package
2014-12-20 NORTARA Generation of Multivariate Data with Arbitrary Marginals
2014-12-20 orgR Analyse Text Files Created by Emacs' Org mode
2014-12-20 RMAWGEN Multi-site Auto-regressive Weather GENerator
2014-12-20 SCEPtERbinary Stellar CharactEristics Pisa Estimation gRid for Binary Systems
2014-12-20 splm Econometric Models for Spatial Panel Data
2014-12-20 svDialogs SciViews GUI API - Dialog boxes
2014-12-20 tcltk2 Tcl/Tk Additions
2014-12-20 testit A Simple Package for Testing R Packages
2014-12-19 bgmm Gaussian Mixture Modeling Algorithms And The Belief-based Mixture Modeling
2014-12-19 geonames Interface to www.geonames.org web service
2014-12-19 lpme Local Polynomial Estimator in Measurement Error Models
2014-12-19 penalized L1 (lasso and fused lasso) and L2 (ridge) penalized estimation in GLMs and in the Cox model
2014-12-19 RJDBC Provides access to databases through the JDBC interface
2014-12-19 sBF Smooth Backfitting
2014-12-19 spanr Search Partition Analysis
2014-12-19 srd Draws Scaled Rectangle Diagrams
2014-12-18 crs Categorical Regression Splines
2014-12-18 DCGL Differential Co-expression Analysis and Differential Regulation Analysis of Gene Expression Microarray Data
2014-12-18 GPC Generalized Polynomial Chaos
2014-12-18 multiband Period Estimation for Multiple Bands
2014-12-18 RnavGraph Using Graphs as a Navigational Infrastructure
2014-12-18 RoughSetKnowledgeReduction Simplification of Decision Tables using Rough Sets
2014-12-18 selfingTree Genotype Probabilities in Intermediate Generations of Inbreeding Through Selfing
2014-12-18 sprinter Framework for Screening Prognostic Interactions
2014-12-17 amap Another Multidimensional Analysis Package
2014-12-17 FPDclustering PD-Clustering and Factor PD-Clustering
2014-12-17 hexView Viewing Binary Files
2014-12-17 nullabor Tools for Graphical Inference
2014-12-17 plsRbeta Partial Least Squares Regression for Beta Regression Models
2014-12-17 plsRcox Partial Least Squares Regression for Cox Models and Related Techniques
2014-12-17 plsRglm Partial Least Squares Regression for Generalized Linear Models
2014-12-17 RcppDL Deep Learning Methods via Rcpp
2014-12-17 refset Subsets with Reference Semantics
2014-12-17 rmatio Read and Write Matlab Files
2014-12-17 rSFA Slow Feature Analysis in R
2014-12-17 seqinr Biological Sequences Retrieval and Analysis
2014-12-17 soil.spec Soil Spectroscopy Tools and Reference Models
2014-12-17 stpp Space-Time Point Pattern simulation, visualisation and analysis
2014-12-16 dti Analysis of diffusion weighted imaging (DWI) data
2014-12-16 fda Functional Data Analysis
2014-12-16 FinancialInstrument Financial Instrument Model Infrastructure for R
2014-12-16 GrammR Graphical Representation and Modeling of Metagenomic Reads
2014-12-16 leaderCluster Leader Clustering Algorithm
2014-12-16 readBrukerFlexData Reads Mass Spectrometry Data in Bruker *flex Format
2014-12-16 RECA Relevant Component Analysis for Supervised Distance Metric Learning
2014-12-16 sdnet Soft Discretization-based Bayesian Network Inference
2014-12-16 season Seasonal analysis of health data
2014-12-16 WaveletComp Computational Wavelet Analysis
2014-12-15 Taxonstand Taxonomic Standardization of Plant Species Names
2014-12-15 wildlifeDI Calculate Indices of Dynamic Interaction for Wildlife Telemetry Data
2014-12-14 logconPH CoxPH Model with Log Concave Baseline Distribution
2014-12-14 varSelRF Variable Selection using Random Forests
2014-12-13 blowtorch Constrained Optimization Via Stochastic Gradient Descent
2014-12-13 rgpui UI for the RGP genetic programming framework
2014-12-13 Rmosek The R-to-MOSEK Optimization Interface
2014-12-13 Vdgraph Variance dispersion graphs and Fraction of design space plots for response surface designs
2014-12-12 DSpat Spatial Modelling for Distance Sampling Data
2014-12-12 rnbn Access NBN Data
2014-12-11 c060 Extended Inference for Lasso and Elastic-Net Regularized Cox and Generalized Linear Models
2014-12-10 biomod2 Ensemble platform for species distribution modeling
2014-12-10 bnormnlr Bayesian Estimation for Normal Heteroscedastic Nonlinear Regression Models
2014-12-10 dbstats Distance-Based Statistics
2014-12-10 DnE Distribution and Equation
2014-12-10 filenamer Easy Management of File Names
2014-12-10 gsalib Utility Functions For GATK
2014-12-10 pawacc Physical activity with accelerometers
2014-12-10 spiders Fits predator preferences model
2014-12-10 vitality Fitting Routines for the Vitality Family of Mortality Models
2014-12-09 Cprob Conditional probability function of a competing event
2014-12-09 cvAUC Cross-Validated Area Under the ROC Curve Confidence Intervals
2014-12-09 etm Empirical Transition Matrix
2014-12-09 isopam Isopam (Clustering)
2014-12-09 MRSP Multinomial Response Models with Structured Penalties
2014-12-09 normalp Routines for Exponential Power Distribution
2014-12-09 RDataCanvas Basic Runtime Support for Datacanvas.io
2014-12-09 rzmq R Bindings for ZeroMQ
2014-12-08 bdynsys Bayesian Dynamical System Model
2014-12-08 BerlinData Easy access to Berlin related data
2014-12-08 breakage SICM pipette tip geometry estimation
2014-12-08 ccda Combined Cluster and Discriminant Analysis
2014-12-08 extrafont Tools for using fonts
2014-12-08 fSRM Social Relations Analyses With Roles ("Family SRM")
2014-12-08 MetSizeR GUI Tool for Estimating Sample Sizes for Metabolomic Experiments
2014-12-08 rbounds Perform Rosenbaum bounds sensitivity tests for matched and unmatched data
2014-12-08 rJPSGCS R-interface to Gene Drop Simulation from JPSGCS
2014-12-08 RSurveillance Design and Analysis of Disease Surveillance Activities
2014-12-08 tgp Bayesian treed Gaussian process models
2014-12-07 BayesianAnimalTracker Bayesian Melding of GPS and DR Path for Animal Tracking
2014-12-07 dashboard Interactive Data Visualization with D3.js
2014-12-07 metasens Advanced Statistical Methods to Model and Adjust for Bias in Meta-Analysis
2014-12-07 RColorBrewer ColorBrewer Palettes
2014-12-07 rtdists Response time distributions
2014-12-07 tempdisagg Methods for Temporal Disaggregation and Interpolation of Time Series
2014-12-06 algstat Algebraic statistics in R
2014-12-06 NISTunits Fundamental Physical Constants and Unit Conversions from NIST
2014-12-06 Rcgmin Conjugate Gradient Minimization of Nonlinear Functions
2014-12-06 reshape2 Flexibly Reshape Data: A Reboot of the Reshape Package
2014-12-06 Rvmmin Variable Metric Nonlinear Function Minimization
2014-12-05 acid Analysing Conditional Distributions of Income
2014-12-05 ars Adaptive Rejection Sampling
2014-12-05 BLR Bayesian Linear Regression
2014-12-05 gettingtothebottom Learning Optimization and Machine Learning for Statistics
2014-12-05 nlmrt Functions for Nonlinear Least Squares Solutions
2014-12-05 okmesonet Retrieve Oklahoma Mesonet climatological data
2014-12-05 optextras Tools to Support Optimization Methods
2014-12-05 PCAmixdata Multivariate Analysis of Mixed Data
2014-12-05 popReconstruct Reconstruct Human Populations of the Recent Past
2014-12-05 robfilter Robust Time Series Filters
2014-12-05 tlm Effects under Linear, Logistic and Poisson Regression Models with Transformed Variables
2014-12-05 tourr Implement Tour Methods in R Code
2014-12-04 BEDASSLE Quantifies effects of geo/eco distance on genetic differentiation
2014-12-04 BoomSpikeSlab MCMC for Spike and Slab Regression
2014-12-04 extWeibQuant Estimate Lower Extreme Quantile with the Censored Weibull MLE and Censored Weibull Mixture
2014-12-04 gmailr Access the Gmail RESTful API
2014-12-04 HGNChelper Handy Functions for Working With HGNC Gene Symbols and Affymetrix Probeset Identifiers
2014-12-04 HSSVD Biclustering with Heterogeneous Variance
2014-12-04 LeafAngle Analysis and Visualization of Plant Leaf Angle Distributions
2014-12-04 MasterBayes ML and MCMC Methods for Pedigree Reconstruction and Analysis
2014-12-04 nonnest2 Tests of Non-nested Models
2014-12-04 NPS Convenience Functions and Tests for Working With the Net Promoter Score (NPS)
2014-12-04 rAltmetric Retrieves Altmerics Data For Any Published Paper From Altmetric.com
2014-12-04 RStars Access to the Digital Universe Data set API
2014-12-04 sensitivityPStrat Principal Stratification Sensitivity Analysis Functions
2014-12-04 spcr Sparse principal component regression
2014-12-04 stratification Univariate Stratification of Survey Populations
2014-12-03 Boom Bayesian Object Oriented Modeling
2014-12-03 deTestSet Testset for differential equations
2014-12-03 genMOSS Functions for the Bayesian Analysis of GWAS Data
2014-12-03 panelaggregation Aggregate Longitudinal Survey Data
2014-12-03 rngSetSeed Seeding the Default RNG with a Numeric Vector
2014-12-03 sequences Generic and Biological Sequences
2014-12-03 YplantQMC Plant Architectural Analysis with Yplant and QuasiMC
2014-12-02 DOBAD Analysis of Discretely Observed linear Birth-And-Death(-and-immigration) Markov Chains
2014-12-02 FLIM Farewell’s Linear Increments Model
2014-12-02 gamboostMSM Estimating multistate models using gamboost()
2014-12-02 MOrder Check Time Homogeneity and Markov Chain Order
2014-12-02 plgp Particle Learning of Gaussian Processes
2014-12-02 radar Fundamental Formulas for Radar
2014-12-02 rrcov Scalable Robust Estimators with High Breakdown Point
2014-12-02 rrcovHD Robust multivariate Methods for High Dimensional Data
2014-12-02 rrcovNA Scalable Robust Estimators with High Breakdown Point for Incomplete Data
2014-12-02 turfR TURF Analysis for R
2014-12-02 VAR.etp VAR modelling: estimation, testing, and prediction
2014-12-02 wrassp Interface to the ASSP Library
2014-12-01 kriging Ordinary Kriging
2014-12-01 MindOnStats Data sets included in Utts and Heckard's Mind on Statistics
2014-12-01 occ Estimates PET neuroreceptor occupancies
2014-12-01 ssd Sample Size Determination (SSD) for Unordered Categorical Data
2014-11-30 rngwell19937 Random number generator WELL19937a with 53 or 32 bit output
2014-11-29 enviPick Peak picking for high resolution mass spectrometry data
2014-11-29 Lmoments L-moments and quantile mixtures
2014-11-29 mco Multiple Criteria Optimization Algorithms and Related Functions
2014-11-29 rainfreq Rainfall Frequency (Design Storm) Estimates from the US National Weather Service
2014-11-29 revealedPrefs Revealed Preferences and Microeconomic Rationality
2014-11-29 simrel Linear Model Data Simulation and Design of Computer Experiments
2014-11-28 EnsemblePCReg Extensible Package for Principal-Component-Regression-based Integration of Base Learners
2014-11-28 EnsemblePenReg Extensible Classes and Methods for Penalized-Regression-based Integration of Base Learners
2014-11-28 highfrequency Tools For Highfrequency Data Analysis
2014-11-28 Unicode Unicode Data and Utilities
2014-11-27 CINOEDV Co-Information based N-Order Epistasis Detector and Visualizer
2014-11-27 DECIDE DEComposition of Indirect and Direct Effects
2014-11-27 genpathmox Generalized PATHMOX Algorithm for PLS-PM, LS and LAD Regression
2014-11-27 miRtest combined miRNA- and mRNA-testing
2014-11-27 orderedLasso Ordered Lasso and Time-lag Sparse Regression
2014-11-27 SSrat Two-dimensional sociometric status determination with rating scales
2014-11-27 superbiclust Generating Robust Biclusters from a Bicluster Set (Ensemble Biclustering)
2014-11-26 EstSimPDMP Estimation and Simulation for PDMPs
2014-11-26 gWidgetsRGtk2 Toolkit implementation of gWidgets for RGtk2
2014-11-26 hierarchicalDS Functions For Performing Hierarchical Analysis of Distance Sampling Data
2014-11-26 kpodclustr Method for Clustering Partially Observed Data
2014-11-26 MCPMod Design and Analysis of Dose-Finding Studies (see also DoseFinding package)
2014-11-26 moduleColor Basic Module Functions
2014-11-26 NHMM Bayesian NHMM Modeling (Multiple Time Series)
2014-11-26 SunterSampling Sunter's sampling design
2014-11-25 acss Algorithmic Complexity for Short Strings
2014-11-25 bipartite Visualising bipartite networks and calculating some (ecological) indices
2014-11-25 dataframes2xls dataframes2xls writes data frames to xls files
2014-11-25 DiscreteInverseWeibull Discrete inverse Weibull distribution
2014-11-25 distrMod Object Oriented Implementation of Probability Models
2014-11-25 GPArotation GPA Factor Rotation
2014-11-25 gsarima Two functions for Generalized SARIMA time series simulation
2014-11-25 iccbeta Multilevel model intraclass correlation for slope heterogeneity
2014-11-25 Julia Fractal Image Data Generator
2014-11-25 KODAMA Knowledge discovery by accuracy maximization
2014-11-25 maboost Binary and Multiclass Boosting Algorithms
2014-11-25 musicNMR Conversion of Nuclear Magnetic Resonance spectrum in audio file
2014-11-25 rstiefel Random orthonormal matrix generation on the Stiefel manifold
2014-11-25 setRNG Set (Normal) Random Number Generator and Seed
2014-11-25 SMR Externally Studentized Midrange Distribution
2014-11-25 soma General-Purpose Optimisation With the Self-Organising Migrating Algorithm
2014-11-25 StressStrength Computation and estimation of reliability of stress-strength models
2014-11-25 SweaveListingUtils Utilities for Sweave together with TeX listings package
2014-11-24 acepack ace() and avas() for selecting regression transformations
2014-11-24 Bergm Bayesian analysis for exponential random graph models
2014-11-24 choiceDes Design Functions for Choice Studies
2014-11-24 choplump Choplump tests
2014-11-24 genridge Generalized Ridge Trace Plots for Ridge Regression
2014-11-24 paleobioDB Download and Process Data from the Paleobiology Database
2014-11-24 RCMIP5 Tools for Manipulating and Summarizing CMIP5 Data
2014-11-24 rdatamarket Data access API for DataMarket.com
2014-11-24 RNCEP Obtain, Organize, and Visualize NCEP Weather Data
2014-11-24 sgr Sample Generation by Replacement
2014-11-24 someKfwer Controlling the Generalized Familywise Error Rate
2014-11-24 xpose4 Tools for Nonlinear Mixed-Effect Model Building and Diagnostics
2014-11-23 EloRating Animal Dominance Hierarchies by Elo Rating
2014-11-22 magrittr A Forward-Pipe Operator for R
2014-11-22 MAPA Multiple Aggregation Prediction Algorithm
2014-11-22 PoweR Computation of Power and Level Tables for Hypothesis Tests
2014-11-22 proteomics Statistical Analysis of High Throughput Proteomics Data
2014-11-22 sisus SISUS: Stable Isotope Sourcing using Sampling
2014-11-21 Ramd Tools For Managing File/function Dependencies In R
2014-11-20 BACprior Choice of the Hyperparameter Omega in the Bayesian Adjustment for Confounding (BAC) Algorithm
2014-11-20 bglm Bayesian Estimation in Generalized Linear Models
2014-11-20 crmn CCMN and other noRMalizatioN methods for metabolomics data
2014-11-20 deltaPlotR Identification of dichotomous differential item functioning (DIF) using Angoff's Delta Plot method
2014-11-20 gset Group Sequential Design in Equivalence Studies
2014-11-20 ilc Lee-Carter Mortality Models using Iterative Fitting Algorithms
2014-11-20 RAPIDR Reliable Accurate Prenatal non-Invasive Diagnosis R package
2014-11-20 treethresh Methods for Tree-based Local Adaptive Thresholding
2014-11-20 x12 x12 - wrapper function and structure for batch processing
2014-11-20 x12GUI X12 - Graphical User Interface
2014-11-19 acnr Annotated Copy-Number Regions
2014-11-19 adaptivetau Tau-leaping stochastic simulation
2014-11-19 analogueExtra Additional functions for use with the analogue package
2014-11-19 basicspace Recovering a Basic Space from Issue Scales
2014-11-19 cocorresp Co-correspondence Analysis Methods
2014-11-19 PGICA Parallel Group ICA Algorithm
2014-11-19 QuACN QuACN: Quantitative Analysis of Complex Networks
2014-11-19 SEAsic Score Equity Assessment- summary index computation
2014-11-19 sqlutils Utilities for working with SQL files
2014-11-19 waterData An R Package for Retrieval, Analysis, and Anomaly Calculation of Daily Hydrologic Time Series Data
2014-11-18 attribrisk Population Attributable Risk
2014-11-18 boolean3 Boolean Binary Response Models
2014-11-18 cooccur Probabilistic Species Co-occurrence Analysis in R
2014-11-18 lokern Kernel Regression Smoothing with Local or Global Plug-in Bandwidth
2014-11-18 spatialTailDep Estimation of spatial tail dependence models
2014-11-18 TSclust Time Series Clustering Utilities
2014-11-17 goric Generalized Order-Restricted Information Criterion
2014-11-17 mcprofile Multiple Contrast Profiles
2014-11-17 randtests Testing randomness in R
2014-11-17 sla Two-Group Straight Line ANCOVA
2014-11-17 spThin Functions for Spatial Thinning of Species Occurrence Records for Use in Ecological Models
2014-11-16 FLSSS Fixed Size Subset Sum Solution
2014-11-16 vudc Visualization of Univariate Data for Comparison
2014-11-15 vowels Vowel Manipulation, Normalization, and Plotting
2014-11-14 entropy Estimation of Entropy, Mutual Information and Related Quantities
2014-11-14 ttScreening Genome-wide DNA methylation sites screening by use of training and testing samples
2014-11-13 aftgee Accelerated Failure Time Model with Generalized Estimating Equations
2014-11-13 bdscale Remove Weekends and Holidays From ggplot2 Axes
2014-11-13 dbarts Discrete Bayesian Additive Regression Trees Sampler
2014-11-13 megaptera MEGAPhylogeny Techniques in R
2014-11-13 optimx A Replacement and Extension of the optim() Function
2014-11-13 toxtestD Experimental design for binary toxicity tests
2014-11-12 R2GUESS Wrapper functions for GUESS
2014-11-12 rmongodb R-MongoDB driver
2014-11-11 catdata Categorical Data
2014-11-11 DepthProc DepthProc
2014-11-11 glogis Fitting and Testing Generalized Logistic Distributions
2014-11-11 lymphclon Accurate Estimation of Clonal Coincidences and Abundances from Biological Replicates
2014-11-10 episplineDensity Density Estimation with Soft Information by Exponential Epi-splines
2014-11-10 gsDesign Group Sequential Design
2014-11-10 ionflows Calculate the Number of Required Flows for Semiconductor Sequencing
2014-11-10 ips Interfaces to Phylogenetic Software in R
2014-11-10 ISBF Iterative Selection of Blocks of Features - ISBF
2014-11-10 ModelGood Validation of risk prediction models
2014-11-10 PHYLOGR Functions for Phylogenetically Based Statistical Analyses
2014-11-10 Rcpp11 R and C++11
2014-11-10 Rothermel Rothermel fire spread model for R
2014-11-10 TUWmodel Lumped Hydrological Model for Education Purposes
2014-11-09 DOvalidation Local Linear Hazard Estimation with Do-Validated and Cross-Validated Bandwidths
2014-11-09 riskSimul Risk Quantification for Stock Portfolios under the T-Copula Model
2014-11-08 LinCal Static Univariate Frequentist and Bayesian Linear Calibration
2014-11-08 OptionPricing Option Pricing with Efficient Simulation Algorithms
2014-11-07 BB Solving and Optimizing Large-Scale Nonlinear Systems
2014-11-07 BTYD Implementing Buy 'Til You Die Models
2014-11-07 npsm Package for Nonparametric Statistical Methods using R
2014-11-07 PANDA Preferential Attachment Based Common Neighbor Distribution Derived Functional Associations
2014-11-07 sqldf Perform SQL Selects on R Data Frames
2014-11-06 anim.plots Simple Animated Plots For R
2014-11-06 CpGFilter CpG Filtering Method Based on Intra-class Correlation Coefficients
2014-11-06 diagram Functions for visualising simple graphs (networks), plotting flow diagrams
2014-11-06 elliptic elliptic functions
2014-11-06 PLSbiplot1 The Partial Least Squares (PLS) Biplot
2014-11-06 pushoverr Send push notifications using Pushover
2014-11-05 hcp Change Point Estimation for Regression with Heteroscedastic Data
2014-11-05 MAT Multidimensional Adaptive Testing
2014-11-05 MPAgenomics Multi-Patient Analysis of Genomic Markers
2014-11-05 ordinalgmifs Ordinal Regression for High-dimensional Data
2014-11-05 shape Functions for plotting graphical shapes, colors
2014-11-05 strap Stratigraphic Tree Analysis for Palaeontology
2014-11-05 TRSbook Functions and Datasets to Accompany the Book "The R Software: Fundamentals of Programming and Statistical Analysis"
2014-11-05 WARN Weaning Age Reconstruction with Nitrogen isotope analysis
2014-11-04 FME A Flexible Modelling Environment for Inverse Modelling, Sensitivity, Identifiability, Monte Carlo Analysis
2014-11-03 BayesTree Bayesian Additive Regression Trees
2014-11-03 CombinePValue Combine a Vector of Correlated p-values
2014-11-03 limSolve Solving Linear Inverse Models
2014-11-03 rjson JSON for R
2014-11-03 ScoreGGUM Score Persons Using the Generalized Graded Unfolding Model
2014-11-03 sdcTarget Statistical Disclosure Control Substitution Matrix Calculator
2014-11-02 bcpa Behavioral change point analysis of animal movement
2014-11-02 CountsEPPM Mean and variance modeling of count data
2014-11-02 OptimalCutpoints Computing optimal cutpoints in diagnostic tests
2014-11-01 kaps K-Adaptive Partitioning for Survival data
2014-11-01 RMTstat Distributions, Statistics and Tests derived from Random Matrix Theory
2014-11-01 smac Sparse Multi-category Angle-Based Large-Margin Classifiers
2014-10-31 PrivateLR Differentially Private Regularized Logistic Regression
2014-10-31 tuple Find every match, or orphan, duplicate, triplicate, or other replicated values
2014-10-30 fAssets Rmetrics - Analysing and Modelling Financial Assets
2014-10-30 fPortfolio Rmetrics - Portfolio Selection and Optimization
2014-10-30 mapplots Data Visualisation on Maps
2014-10-29 fBasics Rmetrics - Markets and Basic Statistics
2014-10-29 isdals Provides datasets for Introduction to Statistical Data Analysis for the Life Sciences
2014-10-29 ldr Methods for likelihood-based dimension reduction in regression
2014-10-28 CateSelection Categorical Variable Selection Methods
2014-10-28 energy E-statistics (energy statistics)
2014-10-28 lassoscore High-Dimensional Inference with the Penalized Score Test
2014-10-28 safi Sensitivity Analysis for Functional Input
2014-10-27 astsa Applied Statistical Time Series Analysis
2014-10-27 DALY DALY Calculator - A GUI for stochastic DALY calculation in R
2014-10-27 qdm Fitting a Quadrilateral Dissimilarity Model to Same-Different Judgments
2014-10-27 ropensecretsapi R Package for the OpenSecrets.org API
2014-10-27 RQDA R-based Qualitative Data Analysis
2014-10-26 RSelenium R bindings for Selenium WebDriver
2014-10-25 BayesMixSurv Bayesian Mixture Survival Models using Additive Mixture-of-Weibull Hazards, with Lasso Shrinkage and Stratification
2014-10-25 choroplethrMaps Contains maps used by the choroplethr package
2014-10-25 DBKGrad Discrete Beta Kernel Graduation of Mortality Data
2014-10-25 FSelector Selecting attributes
2014-10-25 highD2pop Two-Sample Tests for Equality of Means in High Dimension
2014-10-25 ivpack Instrumental Variable Estimation
2014-10-25 RSQLite SQLite Interface for R
2014-10-25 simTool Conduct Simulation Studies with a Minimal Amount of Source Code
2014-10-25 vecsets like base::sets tools but keeps duplicate elements
2014-10-23 IsingFit Fitting Ising models using the eLasso method
2014-10-23 matR Metagenomics Analysis Tools for R
2014-10-23 sld Estimation and Use of the Quantile-Based Skew Logistic Distribution
2014-10-23 splitstackshape Stack and Reshape Datasets After Splitting Concatenated Values
2014-10-22 confidence Confidence Estimation of Environmental State Classifications
2014-10-22 FDGcopulas Multivariate Dependence with FDG Copulas
2014-10-22 JMdesign Joint Modeling of Longitudinal and Survival Data - Power Calculation
2014-10-22 pcaPP Robust PCA by Projection Pursuit
2014-10-22 sigloc Signal Location Estimation
2014-10-22 stepp Subpopulation Treatment Effect Pattern Plot (STEPP)
2014-10-21 cdcsis Conditional Distance Correlation and Its Related Feature Screening Method
2014-10-21 equate Observed-Score Linking and Equating
2014-10-21 MESS Miscellaneous Esoteric Statistical Scripts
2014-10-21 nhlscrapr Compiling the NHL Real Time Scoring System Database for easy use in R
2014-10-21 npsp Nonparametric spatial (geo)statistics
2014-10-21 tclust Robust Trimmed Clustering
2014-10-20 icapca Mixed ICA/PCA
2014-10-20 MDSGUI A GUI for interactive MDS in R
2014-10-20 npmlreg Nonparametric maximum likelihood estimation for random effect models
2014-10-20 Rook Rook - a web server interface for R
2014-10-19 flare Family of Lasso Regression
2014-10-19 multispatialCCM Multispatial Convergent Cross Mapping
2014-10-18 landpred Landmark Prediction of a Survival Outcome
2014-10-18 rareNMtests Ecological and biogeographical null model tests for comparing rarefaction curves
2014-10-18 stochprofML Stochastic Profiling using Maximum Likelihood Estimation
2014-10-17 ecoval Procedures for Ecological Assessment of Surface Waters
2014-10-17 gsg Calculation of selection coefficients
2014-10-17 mdscore Improved Score Tests for Generalized Linear Models
2014-10-17 pBrackets Plot Brackets
2014-10-17 RMKdiscrete Sundry Discrete Probability Distributions
2014-10-17 segmag Determine Event Boundaries in Event Segmentation Experiments
2014-10-16 Metatron Meta-analysis for Classification Data and Correction to Imperfect Reference
2014-10-16 NPCirc Nonparametric Circular Methods
2014-10-16 PubMedWordcloud PubMed Word Clouds
2014-10-16 RcmdrPlugin.steepness Steepness Rcmdr Plug-in
2014-10-16 rivernet Read, Analyze and Plot River Networks
2014-10-16 StMoSim Plots a QQ-Norm Plot with several Gaussian simulations
2014-10-16 windex windex: Analysing convergent evolution using the Wheatsheaf index
2014-10-15 AlgDesign Algorithmic Experimental Design
2014-10-15 evtree Evolutionary Learning of Globally Optimal Trees
2014-10-15 GA Genetic Algorithms
2014-10-15 nsgp Non-Stationary Gaussian Process Regression
2014-10-15 utility Construct, Evaluate and Plot Value and Utility Functions
2014-10-15 vetools Tools for Venezuelan Environmental Data
2014-10-14 dice Calculate probabilities of various dice-rolling events
2014-10-14 FADA Variable selection for supervised classification in high dimension
2014-10-14 mclogit Mixed Conditional Logit
2014-10-14 overlap Estimates of coefficient of overlapping for animal activity patterns
2014-10-13 CP Conditional Power Calculations
2014-10-13 datamart Unified access to your data sources
2014-10-13 popRange popRange: A spatially and temporally explicit forward genetic simulator
2014-10-13 QualInt Test for Qualitative Interactions
2014-10-13 rcdk rcdk - Interface to the CDK Libraries
2014-10-13 sptm SemiParametric Transformation Model Methods
2014-10-12 ConvergenceConcepts Seeing convergence concepts in action
2014-10-12 RNetLogo Provides an Interface to the Agent-Based Modelling Platform NetLogo
2014-10-10 MplusAutomation Automating Mplus Model Estimation and Interpretation
2014-10-10 RSQLServer SQL Server R Database Interface (DBI)
2014-10-09 anominate alpha-NOMINATE Ideal Point Estimator
2014-10-09 ENiRG Ecological Niche in R and GRASS
2014-10-09 minqa Derivative-free optimization algorithms by quadratic approximation
2014-10-09 mpcv Multivariate Process Capability Vector
2014-10-08 moult Models for analysing moult in birds
2014-10-08 Rdsm Threads Environment for R
2014-10-07 CINID Curculionidae INstar IDentification
2014-10-07 mnormpow Multivariate Normal Distributions with Power Integrand
2014-10-07 PLordprob Multivariate Ordered Probit Model via Pairwise Likelihood
2014-10-07 qcc Quality Control Charts
2014-10-07 sft Functions for Systems Factorial Technology Analysis of Data
2014-10-07 TEEReg Trimmed Elemental Estimation for Linear Models
2014-10-07 TurtleGraphics Turtle graphics in R
2014-10-07 VecStatGraphs3D Vector analysis using graphical and analytical methods in 3D
2014-10-06 GISTools Some further GIS capabilities for R
2014-10-06 grofit The package was developed to fit fit many growth curves obtained under different conditions
2014-10-06 lllcrc Local Log-linear Models for Capture-Recapture
2014-10-06 mvprpb Orthant Probability of the Multivariate Normal Distribution
2014-10-06 NB Maximum Likelihood method in estimating effective population size from genetic data
2014-10-06 pingr Check If a Remote Computer is Up
2014-10-06 ProjectTemplate Automates the creation of new statistical analysis projects
2014-10-06 snipEM Snipping methods for robust estimation and clustering
2014-10-06 ZIM Zero-Inflated Models for Count Time Series with Excess Zeros
2014-10-05 catIrt An R Package for Simulating IRT-Based Computerized Adaptive Tests
2014-10-04 R2HTML HTML exportation for R objects
2014-10-04 SightabilityModel Wildlife Sightability Modeling
2014-10-04 vec2dtransf 2D Cartesian Coordinate Transformation
2014-10-02 DDIwR DDI with R
2014-10-02 mycor Automatic Correlation and Regression Test in a Data Frame
2014-10-02 shrink Global, Parameterwise and Joint Post-Estimation Shrinkage
2014-10-02 TED Turbulence Time Series Event Detection and Classification
2014-10-01 exsic Convenience Functions for Botanists to Create Specimens Indices
2014-10-01 SQDA Sparse Quadratic Discriminant Analysis
2014-10-01 steepness Testing Steepness of Dominance Hierarchies
2014-09-30 protViz Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
2014-09-29 activity Animal Activity Statistics
2014-09-29 atmcmc Automatically Tuned Markov Chain Monte Carlo
2014-09-29 DoE.wrapper Wrapper package for design of experiments functionality
2014-09-29 EffectStars Visualization of Categorical Response Models
2014-09-29 GPFDA Apply Gaussian Process in Functional data analysis
2014-09-29 httpRequest Basic HTTP Request
2014-09-29 log4r A simple logging system for R, based on log4j
2014-09-29 rFDSN Get Seismic Data from the International Federation of Digital Seismograph Networks
2014-09-29 ScottKnott The ScottKnott Clustering Algorithm
2014-09-29 sprint Simple Parallel R INTerface
2014-09-28 mc2d Tools for Two-Dimensional Monte-Carlo Simulations
2014-09-28 neural Neural Networks
2014-09-27 MetFns Analysis of Visual Meteor Data
2014-09-27 oro.pet Rigorous - Positron Emission Tomography
2014-09-27 propagate Propagation of Uncertainty
2014-09-26 ADDT A Package for Analysis of Accelerated Destructive Degradation Test Data
2014-09-26 alr4 Data to accompany Applied Linear Regression 4rd edition
2014-09-26 aplpack Another Plot PACKage: stem.leaf, bagplot, faces, spin3R, plotsummary, plothulls, and some slider functions
2014-09-26 cape Combined analysis of pleiotropy and epistasis
2014-09-26 GenWin Spline Based Window Boundaries for Genomic Analyses
2014-09-26 Guerry Maps, data and methods related to Guerry (1833) "Moral Statistics of France"
2014-09-26 iC10TrainingData Training datasets for iC10 package
2014-09-26 jSonarR jSonar Analytics Platform API for R
2014-09-26 oc OC Roll Call Analysis Software
2014-09-25 betareg Beta Regression
2014-09-25 ivprobit Instrumental variables probit model
2014-09-25 qqman Q-Q and manhattan plots for GWAS data
2014-09-25 SPREDA Statistical Package for Reliability Data Analysis
2014-09-24 DBI R Database Interface
2014-09-24 deming Deming, Thiel-Sen and Passing-Bablock Regression
2014-09-24 parsedate Recognize and Parse Dates in Various Formats, Including All ISO 8601 Formats
2014-09-23 pvsR An R package to interact with the Project Vote Smart API for scientific research
2014-09-23 SemiPar Semiparametic Regression
2014-09-23 wnominate WNOMINATE Roll Call Analysis Software
2014-09-22 documair Automatic Documentation for R packages
2014-09-22 IBrokers R API to Interactive Brokers Trader Workstation
2014-09-22 mpmi Mixed-pair mutual information estimators
2014-09-22 predictmeans Calculate Predicted Means for Linear Models
2014-09-21 CGP Composite Gaussian process models
2014-09-21 RcmdrPlugin.MA Graphical User Interface for Conducting Meta-Analyses in R
2014-09-21 sendmailR send email using R
2014-09-21 trotter Pseudo-Vectors Containing All Permutations, Combinations and Subsets of Objects Taken from a Vector
2014-09-20 Density.T.HoldOut Density.T.HoldOut: Non-combinatorial T-estimation Hold-Out for density estimation
2014-09-20 mitools Tools for multiple imputation of missing data
2014-09-20 OrdLogReg Ordinal Logic Regression
2014-09-19 allelematch Identifying unique multilocus genotypes where genotyping error and missing data may be present
2014-09-19 beanplot Visualization via Beanplots (like Boxplot/Stripchart/Violin Plot)
2014-09-19 BEANSP Bayesian Estimate of Age-specific Nest Survival Probabilities
2014-09-19 bReeze Functions for wind resource assessment
2014-09-19 comclim Community climate statistics
2014-09-19 edgeRun More Powerful Unconditional Testing of Negative Binomial Means for Digital Gene Expression Data
2014-09-19 iki.dataclim Consistency, Homogeneity and Summary Statistics of Climatological Data
2014-09-19 LogicForest Logic Forest
2014-09-19 nat.nblast NeuroAnatomy Toolbox (nat) Extension for Assessing Neuron Similarity and Clustering
2014-09-19 nlWaldTest Wald Test of nonlinear restrictions for regression parameters
2014-09-19 opentraj Tools for Creating and Analysing Air Trajectory Data
2014-09-19 RidgeFusion R Package for Ridge Fusion in Statistical Learning
2014-09-19 RMOA Connect R with MOA for Massive Online Analysis
2014-09-19 SmoothHazard Fitting illness-death model for interval-censored data
2014-09-19 spatialnbda Performs spatial NBDA in a Bayesian context
2014-09-18 adaptDA Adaptive Mixture Discriminant Analysis
2014-09-18 bbo Biogeography-Based Optimization
2014-09-18 betategarch Simulation, estimation and forecasting of Beta-Skew-t-EGARCH models
2014-09-18 ivbma Bayesian Instrumental Variable Estimation and Model Determination via Conditional Bayes Factors
2014-09-18 modTempEff Modelling temperature effects using time series data
2014-09-18 uskewFactors Model-based clustering via mixtures of unrestricted skew-t factor analyzer models
2014-09-17 fCopulae Rmetrics - Bivariate Dependence Structures with Copulae
2014-09-17 qgtools Tools for Quantitative Genetics Data Analyses
2014-09-17 RadioSonde Tools for plotting skew-T diagrams and wind profiles
2014-09-17 RMOAjars External jars required for package RMOA
2014-09-16 compute.es Compute Effect Sizes
2014-09-16 dlm Bayesian and Likelihood Analysis of Dynamic Linear Models
2014-09-16 fRegression Rmetrics - Regression Based Decision and Prediction
2014-09-16 GuardianR The Guardian API Wrapper
2014-09-16 hypergea Hypergeometric tests
2014-09-16 m4fe Models for Financial Economics
2014-09-16 PerformanceAnalytics Econometric tools for performance and risk analysis
2014-09-16 polidata Political Data Interface in R
2014-09-16 qat Quality Assurance Toolkit
2014-09-16 UPMASK Unsupervised Photometric Membership Assignment in Stellar Clusters
2014-09-15 binequality Methods for Analyzing Binned Income Data
2014-09-15 demography Forecasting mortality, fertility, migration and population data
2014-09-15 genlasso Path algorithm for generalized lasso problems
2014-09-15 propOverlap Feature (gene) selection based on the Proportional Overlapping Scores
2014-09-15 qpcR Modelling and analysis of real-time PCR data
2014-09-15 Ryacas R interface to the yacas computer algebra system
2014-09-15 SOR Estimation using Sequential Offsetted Regression
2014-09-14 agop Aggregation Operators and Preordered Sets
2014-09-14 EDISON Network Reconstruction and Changepoint Detection
2014-09-14 RcmdrPlugin.coin Rcmdr Coin Plug-In
2014-09-14 RH2 DBI/RJDBC interface to h2 Database
2014-09-14 RPMM Recursively Partitioned Mixture Model
2014-09-13 geepack Generalized Estimating Equation Package
2014-09-13 phyloland Modelling Competitive Exclusion and Limited Dispersal in a Statistical Phylogeographic Framework
2014-09-13 referenceIntervals Reference Intervals
2014-09-12 Mobilize Mobilize plots and functions
2014-09-12 nettools A Network Comparison Framework
2014-09-12 PepPrep Insilico peptide mutation, digestion and homologous comparison
2014-09-12 SimComp Simultaneous Comparisons for Multiple Endpoints
2014-09-12 zCompositions Imputation of Zeros and Nondetects in Compositional Data Sets
2014-09-11 knnIndep Independence tests and benchmarks
2014-09-11 lefse Phylogenetic and Functional Analyses for Ecology
2014-09-11 OjaNP Multivariate Methods Based on the Oja Median and Related Concepts
2014-09-11 RankResponse Ranking Responses in a Single Response Question or a Multiple Response Question
2014-09-11 rChoiceDialogs rChoiceDialogs collection
2014-09-11 rsubgroup Subgroup Discovery and Analytics
2014-09-10 caTools Tools: moving window statistics, GIF, Base64, ROC AUC, etc
2014-09-10 eegkitdata Data for package eegkit
2014-09-10 ForwardSearch Forward Search using asymptotic theory
2014-09-10 hwriter HTML Writer - Outputs R objects in HTML format
2014-09-10 Ohmage R Client for Ohmage 2 server
2014-09-10 RcmdrPlugin.IPSUR An IPSUR Plugin for the R Commander
2014-09-10 saery Small Area Estimation for Rao and Yu Model
2014-09-09 bpkde Back-Projected Kernel Density Estimation
2014-09-09 CircE Circumplex models Estimation
2014-09-09 couchDB Connect and work with couchDB databases
2014-09-09 globalOptTests Objective functions for benchmarking the performance of global optimization algorithms
2014-09-09 micropan Microbial Pan-genome Analysis
2014-09-08 astro Astronomy Functions, Tools and Routines
2014-09-08 easyanova Analysis of variance and other important complementary analyzes
2014-09-08 emulator Bayesian emulation of computer programs
2014-09-08 funHDDC Model-based clustering in group-specific functional subspaces
2014-09-08 lunar Lunar Phase & Distance, Seasons and Other Environmental Factors
2014-09-08 minque An R Package for Linear Mixed Model Analyses
2014-09-08 slackr Send messages, images, R objects and files to Slack.com channels/users
2014-09-08 SNFtool Similarity Network Fusion
2014-09-07 bionetdata Biological and chemical data networks
2014-09-07 OpenRepGrid Tools to analyse repertory grid data
2014-09-07 PerfMeas PerfMeas: Performance Measures for ranking and classification tasks
2014-09-06 fMultivar Rmetrics - Analysing and Modeling Multivariate Financial Return Distributions
2014-09-06 GDAtools A toolbox for the analysis of categorical data in social sciences, and especially Geometric Data Analysis
2014-09-06 pyramid Functions to draw population pyramid
2014-09-05 caseMatch Identify similar cases for qualitative case studies
2014-09-05 GxM Maximum Likelihood Estimation for Gene-by-Measured Environment Interaction Models
2014-09-05 readbitmap Simple Unified Interface to Read Bitmap Images (BMP,JPEG,PNG)
2014-09-04 BCA Business and Customer Analytics
2014-09-04 cooptrees Cooperative aspects of optimal trees in weighted graphs
2014-09-04 CopulaRegression Bivariate Copula Based Regression Models
2014-09-04 helloJavaWorld Hello Java World
2014-09-04 idr Irreproducible discovery rate
2014-09-04 insuranceData A Collection of Insurance Datasets Useful in Risk Classification in Non-life Insurance
2014-09-04 kmi Kaplan-Meier multiple imputation for the analysis of cumulative incidence functions in the competing risks setting
2014-09-04 miscset Miscellaneous Tools Set
2014-09-04 MRCV Methods for Analyzing Multiple Response Categorical Variables (MRCVs)
2014-09-04 parcor Regularized estimation of partial correlation matrices
2014-09-04 plsdof Degrees of Freedom and Statistical Inference for Partial Least Squares Regression
2014-09-04 PP Person Parameter estimation
2014-09-04 ppls Penalized Partial Least Squares
2014-09-04 pqantimalarials web tool for estimating under-five deaths caused by poor-quality antimalarials in sub-Saharan Africa
2014-09-04 RcmdrPlugin.BCA Rcmdr Plug-In for Business and Customer Analytics
2014-09-04 SDaA Sampling: Design and Analysis
2014-09-04 sparseSEM Sparse-aware Maximum Likelihood for Structural Equation Models
2014-09-03 coreTDT TDT for compound heterozygous and recessive models
2014-09-03 DNAtools Tools for analysing forensic genetic DNA data
2014-09-03 logitchoice Fitting l2-regularized logit choice models via generalized gradient descent
2014-09-03 upclass Updated Classification Methods using Unlabeled Data
2014-09-02 ds Descriptive Statistics
2014-09-02 exactmeta Exact fixed effect meta analysis
2014-09-02 optrees Optimal Trees in Weighted Graphs
2014-09-02 rappdirs Application directories: determine where to save data, caches and logs
2014-09-01 heavy Package for robust estimation using heavy-tailed distributions
2014-09-01 RankAggreg Weighted rank aggregation
2014-09-01 Rbitcoin R & bitcoin integration
2014-09-01 RCEIM RCEIM - R Cross Entropy Inspired Method for Optimization
2014-09-01 traitr An interface for creating GUIs modeled in part after traits UI module for python
2014-08-31 chemosensors A tool for the design of synthetic experiments in machine olfaction
2014-08-31 chords Estimation in respondent driven samples
2014-08-31 lbfgs Limited-memory BFGS Optimization
2014-08-31 pmg Poor Man's GUI
2014-08-31 rcdklibs rcdklib - CDK libraries packaged for R
2014-08-30 mcIRT IRT models for multiple choice items (mcIRT)
2014-08-30 nsRFA Non-supervised Regional Frequency Analysis
2014-08-30 survivalMPL Penalised Maximum Likelihood for Survival Analysis Models
2014-08-29 BIOM.utils Utilities for the BIOM (Biological Observation Matrix) Format
2014-08-29 Eplot Plotting longitudinal series
2014-08-29 FreeSortR Free Sorting data analysis
2014-08-29 iosmooth Functions for smoothing with infinite order flat-top kernels
2014-08-29 lakemorpho Lake morphometry in R
2014-08-29 mme Multinomial Mixed Effects Models
2014-08-29 raincpc Obtain and Analyze Rainfall Data from the Climate Prediction Center
2014-08-29 Rcapture Loglinear Models for Capture-Recapture Experiments
2014-08-29 SQUAREM Squared extrapolation methods for accelerating fixed-point iterations
2014-08-29 turboEM A Suite of Convergence Acceleration Schemes for EM, MM and other fixed-point algorithms
2014-08-28 bfast Breaks For Additive Season and Trend (BFAST)
2014-08-28 BioStatR Initiation à la Statistique avec R
2014-08-28 cgAUC Calculate AUC-type measure when gold standard is continuous and the corresponding optimal linear combination of variables with respect to it
2014-08-28 gWidgets gWidgets API for building toolkit-independent, interactive GUIs
2014-08-28 ifultools Insightful Research Tools
2014-08-28 RcmdrPlugin.DoE R Commander Plugin for (industrial) Design of Experiments
2014-08-27 blkergm Fitting block ERGM given the block structure on social networks
2014-08-27 dotenv Load environment variables from .env
2014-08-27 GMD Generalized Minimum Distance of distributions
2014-08-27 gsubfn Utilities for strings and function arguments
2014-08-27 lmeVarComp Testing for a subset of variance components in linear mixed models
2014-08-27 MultiSV MultiSV: an R package for identification of structural variations in multiple populations based on whole genome resequencing
2014-08-27 pamr Pam: prediction analysis for microarrays
2014-08-27 ptinpoly Point-In-Polyhedron Test (2D and 3D)
2014-08-27 shopifyr An R Interface to the Shopify API
2014-08-26 BTSPAS Bayesian Time-Strat. Population Analysis
2014-08-26 cents Censored time series
2014-08-26 HTSCluster Clustering high throughput sequencing (HTS) data
2014-08-26 KANT Package to identify and sort genes overexpressed
2014-08-26 minerva minerva: Maximal Information-Based Nonparametric Exploration R package for Variable Analysis
2014-08-26 testthatsomemore A mocking, stubbing, and file testing framework extending testthat
2014-08-25 commandr Command pattern in R
2014-08-25 CommonJavaJars Useful libraries for building a Java based GUI under R
2014-08-25 granova Graphical Analysis of Variance
2014-08-24 CosmoPhotoz Photometric redshift estimation using generalized linear models
2014-08-24 mkde 2D and 3D movement-based kernel density estimates (MKDEs)
2014-08-24 RsimMosaic R Simple IMage Mosaic creation library
2014-08-24 sonicLength Estimating Abundance of Clones from DNA fragmentation data
2014-08-23 AMOEBA A Multidirectional Optimum Ecotope-Based Algorithm
2014-08-23 bigRR Generalized Ridge Regression (with special advantage for p >> n cases)
2014-08-23 labeling Axis Labeling
2014-08-23 mppa Statistics for analysing multiple simultaneous point processes on the real line
2014-08-23 pauwels2014 Bayesian Experimental Design for Systems Biology
2014-08-23 survAccuracyMeasures Estimate accuracy measures for risk prediction markers from survival data
2014-08-22 bdsmatrix Routines for Block Diagonal Symmetric matrices
2014-08-22 scaRabee Optimization Toolkit for Pharmacokinetic-Pharmacodynamic Models
2014-08-22 wpp2012 World Population Prospects 2012
2014-08-22 xlsxjars Package required POI jars for the xlsx package
2014-08-21 childsds Calculation of standard deviation scores adduced from different growth standards
2014-08-21 sensory Simultaneous Model-Based Clustering and Imputation via a Progressive Expectation-Maximization (PEM) algorithm
2014-08-21 SocialNetworks Generates social networks based on distance
2014-08-21 TableToLongForm TableToLongForm
2014-08-20 CCTpack Cultural Consensus Theory applications to data
2014-08-20 matpow matrix powers
2014-08-20 mokken Mokken Scale Analysis in R
2014-08-19 DStree Recursive Partitioning for Discrete-Time Survival Trees
2014-08-19 extlasso Maximum penalized likelihood estimation with extended lasso penalty
2014-08-19 FD Measuring functional diversity (FD) from multiple traits, and other tools for functional ecology
2014-08-19 laeken Estimation of indicators on social exclusion and poverty
2014-08-19 RcmdrPlugin.EcoVirtual Rcmdr EcoVirtual Plugin
2014-08-19 rite The Right Editor to Write R
2014-08-19 TukeyC Conventional Tukey Test
2014-08-18 BayesX R Utilities Accompanying the Software Package BayesX
2014-08-18 bigmemory.sri A shared resource interface for Bigmemory Project packages
2014-08-18 mvrtn Mean and Variance of Truncated Normal Distribution
2014-08-18 PhyActBedRest Marks periods of sleep in Actigraph accelerometer data
2014-08-17 classify Classification Accuracy and Consistency under IRT models
2014-08-17 gglasso Group Lasso Penalized Learning Using A Unified BMD Algorithm
2014-08-17 LPmerge Merging linkage maps by linear programming
2014-08-16 EcoVirtual Simulation of Ecological Models
2014-08-16 planar Multilayer optics
2014-08-16 RGoogleAnalytics R Wrapper for the Google Analytics API
2014-08-16 RootsExtremaInflections Finds roots, extrema and inflection points of a curve
2014-08-16 snpar Supplementary Non-parametric Statistics Methods
2014-08-15 COUNT Functions, data and code for count data
2014-08-15 CVTuningCov Regularized Estimators of Covariance Matrices with CV Tuning
2014-08-15 gCat Graph-based two-sample tests for categorical data
2014-08-15 phtt Panel Data Analysis with Heterogeneous Time Trends
2014-08-15 pycno Pycnophylactic Interpolation
2014-08-15 rtype A strong type system for R
2014-08-15 semPlot Path diagrams and visual analysis of various SEM packages' output
2014-08-15 survey analysis of complex survey samples
2014-08-14 AntWeb programmatic interface to the AntWeb
2014-08-14 fastGHQuad Fast Rcpp implementation of Gauss-Hermite quadrature
2014-08-14 hmmm hierarchical multinomial marginal models
2014-08-14 RFLPtools Tools to analyse RFLP data
2014-08-14 trimTrees Trimmed opinion pools of trees in a random forest
2014-08-14 XLConnectJars JAR dependencies for the XLConnect package
2014-08-13 dicionariosIBGE Dictionaries for reading microdata surveys from IBGE
2014-08-13 growthrate Bayesian reconstruction of growth velocity
2014-08-13 LEAPFrOG Likelihood Estimation of Admixture in Parents From Offspring Genotypes
2014-08-13 linkcomm Tools for Generating, Visualizing, and Analysing Link Communities in Networks
2014-08-13 ReporteRsjars External jars required for package ReporteRs
2014-08-13 tvd Total Variation Denoising
2014-08-12 astrodatR Astronomical Data
2014-08-12 cAIC4 Conditional Akaike information criterion for lme4
2014-08-12 cramer Multivariate nonparametric Cramer-Test for the two-sample-problem
2014-08-12 random.polychor.pa A Parallel Analysis With Polychoric Correlation Matrices
2014-08-12 Xmisc Xiaobei's miscellaneous classes and functions
2014-08-11 hdi High-Dimensional Inference
2014-08-11 ibeemd Irregular-lattice based ensemble empirical mode decomposition
2014-08-11 lgtdl A set of methods for longitudinal data objects
2014-08-11 threeboost Thresholded variable selection and prediction based on estimating equations
2014-08-11 vartors Transform Definition of Variables to R Scripts
2014-08-11 wfe Weighted Linear Fixed Effects Regression Models for Causal Inference
2014-08-10 hglasso Learning graphical models with hubs
2014-08-10 RWebLogo plotting custom sequence logos
2014-08-10 tiger TIme series of Grouped ERrors
2014-08-10 UScancer Create US cancer datasets from SEER, IARC, and US Census data
2014-08-10 vrtest Variance Ratio tests and other tests for Martingale Difference Hypothesis
2014-08-09 astrolibR Astronomy Users Library
2014-08-09 CHAT Clonal Heterogeneity Analysis Tool
2014-08-09 dglars Differential Geometric LARS (dgLARS) method
2014-08-09 distr Object oriented implementation of distributions
2014-08-09 ecipex Efficient calculation of fine structure isotope patterns via Fourier transforms of simplex-based elemental models
2014-08-09 muhaz Hazard Function Estimation in Survival Analysis
2014-08-09 NScluster Simulation and Estimation of the Neyman-Scott Type Spatial Cluster Models
2014-08-09 SnowballC Snowball stemmers based on the C libstemmer UTF-8 library
2014-08-09 sybilcycleFreeFlux cycle-Free Flux balance analysis: Efficient removal of thermodynamically infeasible cycles from metabolic flux distributions
2014-08-08 itertools2 itertools2: Functions creating iterators for efficient looping
2014-08-08 portes Portmanteau Tests for Univariate and Multivariate Time Series Models
2014-08-08 rgp R genetic programming framework
2014-08-08 RTriangle Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator
2014-08-08 SpatialPack Package for analysis of spatial data
2014-08-06 heatmapFit Fit statistic for binary dependent variable models
2014-08-06 klaR Classification and visualization
2014-08-06 osDesign Design and analysis of observational studies
2014-08-06 rje Miscellaneous useful functions
2014-08-05 dave Functions for "Data Analysis in Vegetation Ecology"
2014-08-05 dendroextras Extra functions to cut, label and colour dendrogram clusters
2014-08-05 dlnm Distributed Lag Non-linear Models
2014-08-05 EMMIXuskew Fitting Unrestricted Multivariate Skew t Mixture Models
2014-08-05 expp Spatial analysis of extra-pair paternity
2014-08-05 hmm.discnp Hidden Markov models with discrete non-parametric observation distributions
2014-08-05 SDMTools Species Distribution Modelling Tools: Tools for processing data associated with species distribution modelling exercises
2014-08-04 nloptr R interface to NLopt
2014-08-04 symmoments Symbolic central and noncentral moments of the multivariate normal distribution
2014-08-03 interAdapt interAdapt
2014-08-03 PottsUtils Utility Functions of the Potts Models
2014-08-03 sanitizers C/C++ source code to trigger Address and Undefined Behaviour Sanitizers
2014-08-03 statfi statfi R tools
2014-08-02 CerioliOutlierDetection Outlier detection using the iterated RMCD method of Cerioli (2010)
2014-08-02 MGRASTer API Client for the MG-RAST Server of the US DOE KBase
2014-08-02 xlsx Read, write, format Excel 2007 and Excel 97/2000/XP/2003 files
2014-08-01 ic.infer Inequality constrained inference in linear normal situations
2014-08-01 LinearizedSVR Linearized Support Vector Regression
2014-08-01 optiscale Optimal scaling
2014-08-01 subgroup Methods for exploring treatment effect heterogeneity in subgroup analysis of clinical trials
2014-07-31 agsemisc Miscellaneous plotting and utility functions
2014-07-31 FrF2 Fractional Factorial designs with 2-level factors
2014-07-31 GeoDE A geometrical Approach to Differential expression and gene-set enrichment
2014-07-31 RefFreeEWAS EWAS using reference-Free DNA methylation mixture deconvolution
2014-07-31 SAPP Statistical Analysis of Point Processes
2014-07-31 timsac TIMe Series Analysis and Control package
2014-07-30 btf Estimates univariate function via Bayesian trend filtering
2014-07-30 CRF CRF - Conditional Random Fields
2014-07-30 ExceedanceTools Confidence regions for exceedance sets and contour lines
2014-07-30 rareGE Testing Gene-Environment Interaction for Rare Genetic Variants
2014-07-29 hasseDiagram Drawing Hasse diagram
2014-07-29 NeatMap Non-clustered heatmap alternatives
2014-07-28 cosinor Tools for estimating and predicting the cosinor model
2014-07-28 cvxclustr Splitting methods for convex clustering
2014-07-28 gmp Multiple Precision Arithmetic
2014-07-28 LowRankQP Low Rank Quadratic Programming
2014-07-28 ltbayes Simulation-Based Bayesian Inference for Latent Traits of Item Response Models
2014-07-28 RJSONIO Serialize R objects to JSON, JavaScript Object Notation
2014-07-28 rYoutheria Access to the YouTheria mammal trait database
2014-07-26 dcmr Attribute profile estimation using Diagnostic Classification Models and MCMC
2014-07-26 DiscML DiscML: An R package for estimating evolutionary rates of discrete characters using maximum likelihood
2014-07-26 infotheo Information-Theoretic Measures
2014-07-26 stsm.class Class and Methods for Structural Time Series Models
2014-07-25 AppliedPredictiveModeling Functions and Data Sets for 'Applied Predictive Modeling'
2014-07-25 inTrees Interpret Tree Ensembles
2014-07-25 nicheROVER (Niche) (R)egion and Niche (Over)lap Metrics for Multidimensional Ecological Niches
2014-07-25 TreeSimGM Simulating Phylogenetic Trees under a General Model
2014-07-24 imguR Imgur API Client Package for R
2014-07-24 ManyTests Multiple testing procedures of Cox (2011) and Wang and Cox (2007)
2014-07-24 mtk Mexico ToolKit library (MTK)
2014-07-24 sensitivitymw Sensitivity analysis using weighted M-statistics
2014-07-24 spuRs Functions and Datasets for "Introduction to Scientific Programming and Simulation Using R"
2014-07-24 ssh.utils Local and remote system commands with output and error capture
2014-07-24 tables Formula-driven table generation
2014-07-23 hglm.data Data for The hglm Package
2014-07-23 ReorderCluster Reordering the dendrogram according to the class labels
2014-07-23 rnaseqWrapper Wrapper for several R packages and scripts to automate RNA-seq analysis
2014-07-22 babynames US baby names 1880-2013
2014-07-22 fueleconomy EPA fuel economy data
2014-07-22 glasso Graphical lasso- estimation of Gaussian graphical models
2014-07-22 leapp latent effect adjustment after primary projection
2014-07-22 MDPtoolbox Markov Decision Processes toolbox
2014-07-22 mewAvg A Fixed Memeory Moving Expanding Window Average
2014-07-22 nasaweather Collection of datasets from the ASA 2006 data expo
2014-07-22 nontargetData Quantized simulation data of isotope pattern centroids
2014-07-22 nycflights13 Data about flights departing NYC in 2013
2014-07-22 RMRAINGEN RMRAINGEN (R Multi-site RAINfall GENeretor): a package to generate daily time series of rainfall from monthly mean values
2014-07-22 SPACECAP A Program to Estimate Animal Abundance and Density using Bayesian Spatially-Explicit Capture-Recapture Models
2014-07-22 splusTimeDate Times and Dates from S-PLUS
2014-07-21 BayesLogit Logistic Regression
2014-07-21 densityClust Clustering by fast search and find of density peaks
2014-07-21 gamm4 Generalized additive mixed models using mgcv and lme4
2014-07-21 GeoGenetix Quantification of the effect of geographic versus environmental isolation on genetic differentiation
2014-07-21 ineq Measuring Inequality, Concentration, and Poverty
2014-07-21 msme Functions and Datasets for "Methods of Statistical Model Estimation"
2014-07-21 SuperLearner Super Learner Prediction
2014-07-20 gWidgetstcltk Toolkit implementation of gWidgets for tcltk package
2014-07-20 ProgGUIinR support package for "Programming Graphical User Interfaces in R"
2014-07-20 SBRect Detecting structural breaks using rectangle covering (non-parametric method)
2014-07-19 RGtk2 R bindings for Gtk 2.8.0 and above
2014-07-19 slp Discrete Prolate Spheroidal (Slepian) Sequence Regression Smoothers
2014-07-19 TEQR Target Equivalence Range Design
2014-07-18 bezier Bezier Curve and Spline Toolkit
2014-07-18 mem Moving Epidemic Method R Package
2014-07-18 siRSM Single-Index Response Surface Models
2014-07-17 mvcwt Wavelet analysis of multiple time series
2014-07-17 nscancor Non-Negative and Sparse CCA
2014-07-17 nsprcomp Non-Negative and Sparse PCA
2014-07-16 functional Curry, Compose, and other higher-order functions
2014-07-16 GCAI.bias Guided Correction Approach for Inherited bias (GCAI.bias)
2014-07-16 hillmakeR Perform occupancy analysis
2014-07-16 phaseR Phase Plane Analysis of One and Two Dimensional Autonomous ODE Systems
2014-07-16 translate Bindings for the Google Translate API v2
2014-07-15 ParallelForest Random Forest Classification with Parallel Computing
2014-07-15 quad Exact permutation moments of quadratic form statistics
2014-07-15 ROSE ROSE: Random Over-Sampling Examples
2014-07-15 synchrony Methods for computing spatial, temporal, and spatiotemporal statistics
2014-07-14 IDPSurvival Imprecise Dirichlet Process for Survival Analysis
2014-07-14 regress Gaussian linear models with linear covariance structure
2014-07-12 IAT Functions to use with data from the Implicit Association Test
2014-07-11 popKorn For interval estimation of mean of selected populations
2014-07-11 refund.wave Wavelet-Domain Regression with Functional Data
2014-07-11 tth TeX to HTML/MathML Translators tth/ttm
2014-07-10 CondReg Condition Number Regularized Covariance Estimation
2014-07-10 COSINE COndition SpecIfic sub-NEtwork
2014-07-10 metafolio Metapopulation simulations for conserving salmon through portfolio optimization
2014-07-10 pRSR Test of periodicity using response surface regression
2014-07-10 robustvarComp Robust Estimation of Variance Component Models
2014-07-10 rysgran Grain size analysis, textural classifications and distribution of unconsolidated sediments
2014-07-10 surv2sampleComp Inference for model-free between-group parameters for censored survival data
2014-07-09 crossReg Confidence intervals for crossover points of two simple regression lines
2014-07-09 translateR Bindings for the Google and Microsoft Translation APIs
2014-07-08 EvoRAG Evolutionary Rates Across Gradients
2014-07-08 RmixmodCombi Combining Mixture Components for Clustering
2014-07-08 sievetest Sieve test reporting functions
2014-07-07 readODS Read ODS files and puts them into data frames
2014-07-06 rkvo Read Key/Value Pair Observations
2014-07-05 eive An algorithm for reducing errors-in-variable bias in simple linear regression
2014-07-05 ForIT Functions from the 2nd Italian Forest Inventory (INFC)
2014-07-05 Thinknum Thinknum Data Connection
2014-07-05 tm.plugin.factiva Import articles from Factiva using the tm text mining framework
2014-07-04 CompGLM Conway-Maxwell-Poisson GLM and distribution functions
2014-07-04 rinat Access iNaturalist data through APIs
2014-07-04 SOD SOD for multidimensional scaling
2014-07-03 Bayesianbetareg Bayesian Beta regression: joint mean and precision modeling
2014-07-03 mcc Moment Corrected Correlation
2014-07-03 movMF Mixtures of von Mises-Fisher Distributions
2014-07-03 qualCI Causal Inference with Qualitative and Ordinal Information on Outcomes
2014-07-02 FunctionalNetworks An algorithm for gene and gene set network inference
2014-07-02 hSDM hierarchical Bayesian species distribution models
2014-07-02 LogConcDEAD Log-concave Density Estimation in Arbitrary Dimensions
2014-07-02 MAVTgsa Three methods to identify differentially expressed gene sets, ordinary least square test, Multivariate Analysis Of Variance test with n contrasts and Random forest
2014-07-02 spatial.tools R functions for working with spatial data
2014-07-01 Rcplex R interface to CPLEX
2014-07-01 scoring Proper scoring rules
2014-07-01 subsemble An Ensemble Method for Combining Subset-Specific Algorithm Fits
2014-07-01 sudoku Sudoku Puzzle Generator and Solver
2014-06-30 CORM The Clustering of Regression Models Method
2014-06-30 GenBinomApps Clopper-Pearson Confidence Interval and Generalized Binomial Distribution
2014-06-30 rococo RObust rank COrrelation COefficient and test
2014-06-30 stressr Fetch and plot financial stress index and component data
2014-06-29 BANOVA Hierarchical Bayesian ANOVA Models
2014-06-28 np Nonparametric kernel smoothing methods for mixed data types
2014-06-28 stosim Stochastic Simulator for Reliability Modeling of Repairable Systems
2014-06-27 cond Approximate conditional inference for logistic and loglinear models
2014-06-27 rforensicbatwing BATWING for calculating forensic trace-suspect match probabilities
2014-06-26 ezsim provide an easy to use framework to conduct simulation
2014-06-26 pedigreemm Pedigree-based mixed-effects models
2014-06-26 RelValAnalysis Relative Value Analysis
2014-06-26 sp23design Design and Simulation of seamless Phase II-III Clinical Trials
2014-06-25 dagbag Learning directed acyclic graphs (DAGs) through bootstrap aggregating
2014-06-25 ngram An n-gram Babbler
2014-06-25 nlsMicrobio Nonlinear regression in predictive microbiology
2014-06-24 EasyStrata Evaluation of stratified genome-wide association meta-analysis results
2014-06-24 FisHiCal Iterative FISH-based Calibration of Hi-C Data
2014-06-24 InventorymodelPackage Inventorymodel
2014-06-24 LS2Wstat A Multiscale Test of Spatial Stationarity for LS2W processes
2014-06-24 matlab MATLAB emulation package
2014-06-24 optR Optimization Toolbox for solving linear systems
2014-06-24 RWBP Detects spatial outliers using a Random Walk on Bipartite Graph
2014-06-24 rwt Rice Wavelet Toolbox wrapper
2014-06-24 weatherData Get Weather Data from the Web
2014-06-23 rClinicalCodes R tools for integrating with the www.clinicalcodes.org repository
2014-06-22 eegAnalysis Tools for analysis and classification of electroencephalography (EEG) data
2014-06-22 pbdNCDF4 Programming with Big Data – Interface to Parallel Unidata NetCDF4 Format Data Files
2014-06-22 TaoTeProgramming Illustrations from Tao Te Programming
2014-06-21 aemo Download and process AEMO price and demand data
2014-06-21 bcpmeta Bayesian Multiple Changepoint Detection Using Metadata
2014-06-21 ConnMatTools Tools for working with connectivity matrices
2014-06-21 funreg funreg (Functional Regression for Irregularly Timed Data)
2014-06-20 parallelMCMCcombine Methods for combining independent subset Markov chain Monte Carlo (MCMC) posterior samples to estimate a posterior density given the full data set
2014-06-19 CommunityCorrelogram Ecological Community Correlogram
2014-06-19 hazus Damage functions from FEMA's HAZUS software for use in modeling financial losses from natural disasters
2014-06-18 fmri Analysis of fMRI experiments
2014-06-18 iGasso Genetic association tests and utilities
2014-06-18 localsolver R API to LocalSolver
2014-06-18 OmicKriging OmicKriging for Phenotypic Prediction
2014-06-17 clogitL1 Fitting exact conditional logistic regression with lasso and elastic net penalties
2014-06-17 cmprsk Subdistribution Analysis of Competing Risks
2014-06-17 KernSmoothIRT Nonparametric Item Response Theory
2014-06-17 tictoc Functions for timing R scripts, as well as implementations of Stack and List structures
2014-06-16 arnie "Arnie" box office records 1982-2014
2014-06-16 RI2by2 Randomization inference for treatment effects on a binary outcome
2014-06-15 RSKC Robust sparse K-means
2014-06-15 xhmmScripts XHMM R scripts
2014-06-14 babel Ribosome profiling data analysis
2014-06-14 rbitcoinchartsapi R Package for the BitCoinCharts.com API
2014-06-14 table1xls Produces summary tables and exports them to multi-tab spreadsheet format (.xls or .xlsx)
2014-06-13 AssetPricing Optimal pricing of assets with fixed expiry date
2014-06-13 DeducerText Deducer GUI for Text Data
2014-06-13 ElstonStewart Elston-Stewart Algorithm
2014-06-13 ESGtoolkit Toolkit for the simulation of financial assets and interest rates models
2014-06-13 PCDSpline Semiparametric regression analysis of panel count data using monotone splines
2014-06-13 wordcloud Word Clouds
2014-06-12 CopyDetect Computing Statistical Indices to Detect Answer Copying on Multiple-Choice Tests
2014-06-12 faraway Functions and datasets for books by Julian Faraway
2014-06-12 flip Multivariate Permutation Tests
2014-06-12 qVarSel Variables Selection for Clustering and Classification
2014-06-12 ustyc Fetch US Treasury yield curve data
2014-06-12 yaml Methods to convert R data to YAML and back
2014-06-11 tm.plugin.alceste Import texts from files in the Alceste format using the tm text mining framework
2014-06-11 tm.plugin.mail Text Mining E-Mail Plug-In
2014-06-10 gsmoothr Smoothing tools
2014-06-10 HiCseg Detection of domains in HiC data
2014-06-10 ICsurv A package for semiparametric regression analysis of interval-censored data
2014-06-10 ORCI Several confidence intervals for the odds ratio
2014-06-10 popdemo Provides Tools For Demographic Modelling Using Projection Matrices
2014-06-10 qmap Statistical transformations for post-processing climate model output
2014-06-10 SCI Standardized Climate Indices such as SPI, SRI or SPEI
2014-06-09 IsoCI Confidence intervals for current status data based on transformations and bootstrap
2014-06-08 synlik Synthetic Likelihood methods for intractable likelihoods
2014-06-07 compositions Compositional Data Analysis
2014-06-07 Cubist Rule- and Instance-Based Regression Modeling
2014-06-07 genasis Global ENvironmental ASsessment Information System (GENASIS) computational tools
2014-06-07 Interact Tests for marginal interactions in a 2 class response model
2014-06-07 kobe Tools for the provision of scientific fisheries management advice
2014-06-07 Rmalschains Continuous Optimization using Memetic Algorithms with Local Search Chains (MA-LS-Chains) in R
2014-06-06 memgene Spatial pattern detection in genetic distance data using Moran's Eigenvector Maps
2014-06-06 tweedie Tweedie exponential family models
2014-06-05 AR1seg Segmentation of an autoregressive Gaussian process of order 1
2014-06-05 SpatialEpi Methods and Data for Spatial Epidemiology
2014-06-05 vbsr Variational Bayes Spike Regression Regularized Linear Models
2014-06-04 ChargeTransport Charge Transfer Rates and Charge Carrier Mobilities
2014-06-04 rsdepth Ray Shooting Depth (i.e. RS Depth) functions for bivariate analysis
2014-06-04 sas7bdat SAS Database Reader (experimental)
2014-06-03 ebSNP Genotyping and SNP calling using single-sample next generation sequencing data
2014-06-03 popgraph This is an R package that constructs and manipulates population graphs
2014-06-02 dissUtils Utilities for making pairwise comparisons of multivariate data
2014-06-02 Mposterior Mposterior: R package for Robust and Scalable Bayes via a Median of Subset Posterior Measures
2014-06-02 orloca The package deals with Operations Research LOCational Analysis models
2014-06-02 rHealthDataGov Retrieve data sets from the HealthData.gov data API
2014-06-01 rmetasim An individual-based population genetic simulation environment
2014-05-31 lasso2 L1 constrained estimation aka ‘lasso’
2014-05-31 pbo Probability of Backtest Overfitting
2014-05-31 ripa R Image Processing and Analysis
2014-05-31 rplotengine R as a plotting engine
2014-05-31 STPGA Selection of Training Populations by Genetic Algorithm
2014-05-31 taRifx.geo Collection of various spatial functions
2014-05-30 interventionalDBN Interventional Inference for Dynamic Bayesian Networks
2014-05-30 kdetrees Nonparametric method for identifying discordant phylogenetic trees
2014-05-30 qcr Quality control and reliability
2014-05-30 SensitivityCaseControl Sensitivity Analysis for Case-Control Studies
2014-05-29 bootruin A bootstrap test for the probability of ruin in the classical risk process
2014-05-29 LearnBayes Functions for Learning Bayesian Inference
2014-05-29 taRifx Collection of utility and convenience functions
2014-05-28 harvestr A Parallel Simulation Framework
2014-05-28 ivlewbel Uses heteroscedasticity to estimate mismeasured and endogenous regressor models
2014-05-28 ordBTL Modelling comparison data with ordinal response
2014-05-28 seg A set of tools for measuring spatial segregation
2014-05-27 bbmle Tools for general maximum likelihood estimation
2014-05-27 bmmix Bayesian multinomial mixture
2014-05-27 metagen Inference in Meta Analysis and Meta Regression
2014-05-26 pbdPROF Programming with Big Data — MPI Profiling Tools
2014-05-26 SRRS The Stepwise Response Refinement Screener (SRRS)
2014-05-23 alphashape3d Implementation of the 3D alpha-shape for the reconstruction of 3D sets from a point cloud
2014-05-23 Modalclust Hierarchical Modal Clustering
2014-05-23 OrgMassSpecR Organic Mass Spectrometry
2014-05-23 rpart.utils Tools for parsing and manipulating rpart objects, including generating machine readable rules
2014-05-23 tsbridge Calculate normalising constants for Bayesian time series models
2014-05-23 ucbthesis UC Berkeley graduate division thesis template
2014-05-22 BCE Bayesian composition estimator: estimating sample (taxonomic) composition from biomarker data
2014-05-22 nmcdr Non-parametric Multiple Change-points Detection
2014-05-21 KRLS Kernel-based Regularized Least squares (KRLS)
2014-05-21 monomvn Estimation for multivariate normal and Student-t data with monotone missingness
2014-05-21 Rmpi Interface (Wrapper) to MPI (Message-Passing Interface)
2014-05-21 spatial.gev.bma Hierarchical spatial generalized extreme value (GEV) modeling with Bayesian Model Averaging (BMA)
2014-05-19 cubfits Codon Usage Bias Fits
2014-05-19 hawkes Hawkes process simulation and calibration toolkit
2014-05-18 cladoRcpp C++ implementations of phylogenetic cladogenesis calculations
2014-05-18 cstar Substantive significance testing for regression estimates and marginal effects
2014-05-18 Hankel Univariate non-parametric two-sample test based on empirical Hankel transforms
2014-05-18 MC2toPath Translates information from netcdf files with MC2 output into inter-PVT transitions
2014-05-18 robust Robust Library
2014-05-17 boostr A modular framework to bag or boost any estimation procedure
2014-05-17 micEconAids Demand Analysis with the Almost Ideal Demand System (AIDS)
2014-05-16 detect Analyzing Wildlife Data with Detection Error
2014-05-16 dynia Fit Dynamic Intervention Model
2014-05-16 FGN Fractional Gaussian Noise and power law decay time series model fitting
2014-05-16 mvctm Multivariate Variance Components Tests for Multilevel Data
2014-05-16 PBSddesolve Solver for Delay Differential Equations
2014-05-16 QRM Provides R-language Code to Examine Quantitative Risk Management Concepts
2014-05-14 ALDqr Quantile Regression Using Asymmetric Laplace Distribution
2014-05-14 erpR Event-related potentials (ERP) analysis, graphics and utility functions
2014-05-14 hydroApps Tools and models for hydrological applications
2014-05-14 pkgmaker Package development utilities
2014-05-14 rvHPDT Calling haplotype-based and variant-based pedigree disequilibrium test for rare variants in pedigrees
2014-05-14 shp2graph Convert a SpatialLinesDataFrame object to a "igraph-class" object
2014-05-13 cutoffR CUTOFF: A Spatio-temporal Imputation Method
2014-05-13 samplingEstimates Sampling Estimates
2014-05-12 finiteruinprob Computation of the probability of ruin within a finite time horizon
2014-05-12 stilt Separable Gaussian Process Interpolation (Emulation)
2014-05-11 siplab Spatial individual-plant modelling
2014-05-10 rSCA An R Package for Stepwise Cluster Analysis
2014-05-09 akmeans Adaptive Kmeans algorithm based on threshold
2014-05-09 msap Statistical analysis for Methylation-sensitive Amplification Polymorphism data
2014-05-08 fishMod Fits Poisson-sum-of-Gammas GLMs, Tweedie GLMs, and delta log-normal mdoels
2014-05-08 iRepro Reproducibility for Interval-Censored Data
2014-05-08 PPtree Projection pursuit classification tree
2014-05-08 ProfessR Grades Setting and Exam Maker
2014-05-08 psgp Projected Spatial Gaussian Process (psgp) methods
2014-05-08 rbundler Rbundler manages an application's dependencies systematically and repeatedly
2014-05-07 bdvis Biodiversity Data Visualizations
2014-05-07 CALIBERrfimpute Multiple imputation using MICE and Random Forest
2014-05-07 Dominance ADI (average dominance index), social network graphs with dual directions, and music notation graph
2014-05-07 freestats Statistical algorithms used in common data mining course
2014-05-07 futile.matrix Random matrix generation and manipulation
2014-05-07 glm2 Fitting Generalized Linear Models
2014-05-07 gplm Generalized partial linear models (GPLM)
2014-05-07 metap Meta-analysis of significance values
2014-05-07 noncensus U.S. Census Regional and Demographic Data
2014-05-07 PCGSE Principal Component Gene Set Enrichment
2014-05-07 tawny Provides various portfolio optimization strategies including random matrix theory and shrinkage estimators
2014-05-06 bandit Functions for simple A/B split test and multi-armed bandit analysis
2014-05-06 FLR Fuzzy Logic Rule Classifier
2014-05-06 KappaV Calculates "vectorial Kappa", an index of congruence between patchy mosaics
2014-05-06 networkreporting Tools for using network reporting estimators
2014-05-06 RcmdrPlugin.MPAStats R Commander Plug-in for MPA Statistics
2014-05-06 tawny.types Common types for tawny
2014-05-05 dams Dams in the United States from the National Inventory of Dams (NID)
2014-05-05 MCMC.OTU Bayesian analysis of multivariate counts data
2014-05-05 truncSP Semi-parametric estimators of truncated regression models
2014-05-04 endorse R Package for Analyzing Endorsement Experiments
2014-05-04 hydrogeo Groundwater data presentation and interpretation
2014-05-03 sglr An R package for power and boundary calculations in pre-licensure vaccine trials using a sequential generalized likelihood ratio test
2014-05-02 BalancedSampling Balanced and spatially balanced sampling
2014-05-02 benchmark Benchmark Experiments Toolbox
2014-05-02 GeneFeST Bayesian calculation of gene-specific FST from genomic SNP data
2014-05-02 HK80 Conversion Tools for HK80 Geographical Coordinate System
2014-05-02 irtProb Utilities and Probability Distributions Related to Multidimensional Person Item Response Models
2014-05-02 NominalLogisticBiplot Biplot representations of categorical data
2014-05-02 rcppbugs R binding for cppbugs
2014-05-02 RcppSMC Rcpp bindings for Sequential Monte Carlo
2014-05-01 dynsurv Dynamic models for survival data
2014-05-01 MultiCNVDetect Multiple Copy Number Variation Detection
2014-05-01 nplplot Plotting linkage and association results
2014-05-01 ocean Biophysical Oceanography Tools
2014-05-01 PTE Personalized Treatment Evaluator
2014-04-30 CMPControl Control Charts for Conway-Maxwell-Poisson Distribution
2014-04-30 lar History of labour relations package
2014-04-30 pdfCluster Cluster analysis via nonparametric density estimation
2014-04-30 SoilR Models of Soil Organic Matter Decomposition
2014-04-29 bayesDem Graphical User Interface for bayesTFR, bayesLife and bayesPop
2014-04-29 bbefkr Bayesian bandwidth estimation and semi-metric selection for the functional kernel regression with unknown error density
2014-04-29 hierNet A Lasso for Hierarchical Interactions
2014-04-29 MBA Multilevel B-spline Approximation
2014-04-29 uniReg Unimodal penalized spline regression using B-splines
2014-04-28 EasyMARK Utility functions for working with mark-recapture data
2014-04-28 GGEBiplotGUI GGEBiplotGUI: Interactive GGE Biplots in R
2014-04-28 mcheatmaps Multiple matrices heatmap visualization
2014-04-28 pxR PC-Axis with R
2014-04-27 plusser A Google+ Interface for R
2014-04-27 QCA3 Yet another package for Qualitative Comparative Analysis
2014-04-26 Rpdb Read, write, visualize and manipulate PDB files
2014-04-25 DandEFA Dandelion Plot for R-mode Exploratory Factor Analysis
2014-04-25 DynClust Denoising and clustering for dynamical image sequence (2D or 3D)+T
2014-04-25 flux Flux rate calculation from dynamic closed chamber measurements
2014-04-25 ICEbox Individual Conditional Expectation Plot Toolbox
2014-04-25 RSvgDevice An R SVG graphics device
2014-04-24 binhf Haar-Fisz functions for binomial data
2014-04-24 clusterfly Explore clustering interactively using R and GGobi
2014-04-24 EvCombR Evidence Combination in R
2014-04-24 falcon Finding Allele-specific Copy Number in Next-Generation Sequencing Data
2014-04-24 MILC MIcrosimulation Lung Cancer (MILC) model
2014-04-24 polywog Bootstrapped Basis Regression with Oracle Model Selection
2014-04-24 rggobi Interface between R and GGobi
2014-04-24 rpubchem rpubchem - Interface to the PubChem Collection
2014-04-24 sand Statistical Analysis of Network Data with R
2014-04-23 classifly Explore classification models in high dimensions
2014-04-23 meifly Interactive model exploration using GGobi
2014-04-23 micEconCES Analysis with the Constant Elasticity of Substitution (CES) function
2014-04-23 packHV A few useful functions for statisticians
2014-04-23 reshape Flexibly reshape data
2014-04-23 SNPassoc SNPs-based whole genome association studies
2014-04-22 apmsWAPP Pre- and Postprocessing for AP-MS data analysis based on spectral counts
2014-04-22 crackR Probabilistic damage tolerance analysis for fatigue cracking of metallic aerospace structures
2014-04-22 DIFlasso A penalty approach to Differential Item Functioning in Rasch Models
2014-04-22 dynamicTreeCut Methods for detection of clusters in hierarchical clustering dendrograms
2014-04-22 IQCC Improved Quality Control Charts
2014-04-22 kcirt k-Cube Thurstonian IRT Models
2014-04-22 memoise Memoise functions
2014-04-22 micEcon Microeconomic Analysis and Modelling
2014-04-22 micEconSNQP Symmetric Normalized Quadratic Profit Function
2014-04-22 profr An alternative display for profiling information
2014-04-22 quipu Summary charts of micro satellite profiles for a set of biological samples
2014-04-22 R2STATS A GTK GUI for fitting and comparing GLM and GLMM in R
2014-04-21 GSAgm Gene Set Analysis using the Gamma Method
2014-04-19 RApiSerialize R API Serialization
2014-04-19 Reol R interface to the Encyclopedia of Life
2014-04-19 RTextureMetrics Functions for calculation of texture metrics for Grey Level Co-occurrence Matrices
2014-04-19 rWBclimate A package for accessing World Bank climate data
2014-04-18 AnthropMMD A GUI for Mean Measures of Divergence
2014-04-18 bayesQR Bayesian quantile regression
2014-04-18 Bclim Bayesian Palaeoclimate Reconstruction from Pollen
2014-04-17 ATmet Advanced Tools for Metrology
2014-04-17 ModelMap Creates Random Forest and Stochastic Gradient Boosting Models, and applies them to GIS .img files to build detailed prediction maps
2014-04-17 MSQC Multivariate Statistical Quality Control
2014-04-17 poisson.glm.mix Fit high dimensional mixtures of Poisson GLMs
2014-04-16 bigalgebra BLAS routines for native R matrices and big.matrix objects
2014-04-16 mizer Multi-species sIZE spectrum modelling in R
2014-04-16 PropCIs Various confidence interval methods for proportions
2014-04-16 simboot Simultaneous inference for diversity indices
2014-04-15 Johnson Johnson Transformation
2014-04-15 NBPSeq Negative Binomial Models for RNA-Sequencing Data
2014-04-15 RGIFT Create quizzes in GIFT Format
2014-04-15 scar Shape-Constrained Additive Regression: a Maximum Likelihood Approach
2014-04-15 scio Sparse Column-wise Inverse Operator
2014-04-14 AMORE A MORE flexible neural network package
2014-04-14 DivE Diversity Estimator
2014-04-14 LOGICOIL LOGICOIL: multi-state prediction of coiled-coil oligomeric state
2014-04-14 pumilioR Pumilio in R
2014-04-13 hydroPSO Particle Swarm Optimisation, with focus on Environmental Models
2014-04-13 RcppBDT Rcpp bindings for the Boost Date_Time library
2014-04-13 SensoMineR Sensory data analysis with R
2014-04-12 BootPR Bootstrap Prediction Intervals and Bias-Corrected Forecasting
2014-04-12 earlywarnings Early Warning Signals Toolbox for Detecting Critical Transitions in Timeseries
2014-04-12 fastM Fast Computation of Multivariate M-estimators
2014-04-12 Rcsdp R interface to the CSDP semidefinite programming library
2014-04-11 gRapfa Acyclic Probabilistic Finite Automata
2014-04-11 rvTDT population control weighted rare-variants TDT
2014-04-10 archetypes Archetypal Analysis
2014-04-10 grt General Recognition Theory
2014-04-10 ora Convenient Tools for Working with Oracle Databases
2014-04-09 bit A class for vectors of 1-bit booleans
2014-04-09 cuttlefish.model An R package to perform LPUE standardization and stock assessment of the English Channel cuttlefish stock using a two-stage biomass model
2014-04-09 ff memory-efficient storage of large data on disk and fast access functions
2014-04-09 GHQp Gauss Hermite Quadrature with pruning
2014-04-09 PBSadmb ADMB for R Using Scripts or GUI
2014-04-09 spsmooth spsmooth: An Extension Package for 'mgcv'
2014-04-08 coxphw Weighted Estimation in Cox Regression
2014-04-07 disclap Discrete Laplace Exponential Family
2014-04-07 MMS Fixed effects Selection in Linear Mixed Models
2014-04-07 tuneR Analysis of music and speech
2014-04-05 acss.data Data Only: Algorithmic Complexity of Short Strings (Computed via Coding Theorem Method)
2014-04-05 argparse Command line optional and positional argument parser
2014-04-05 bbemkr Bayesian bandwidth estimation for multivariate kernel regression with Gaussian error
2014-04-05 isotonic.pen Penalized Isotonic Regression in one and two dimensions
2014-04-05 nonrandom Stratification and matching by the propensity score
2014-04-04 EcoHydRology A community modeling foundation for Eco-Hydrology
2014-04-04 fts R interface to tslib (a time series library in c++)
2014-04-04 palinsol Insolation for palaeoclimate studies
2014-04-03 csampling Functions for Conditional Simulation in Regression-Scale Models
2014-04-03 doRedis Foreach parallel adapter for the rredis package
2014-04-03 findpython Python tools to find an acceptable python binary
2014-04-03 marg Approximate marginal inference for regression-scale models
2014-04-03 Methplot Visualize the methylation patterns
2014-04-03 nlreg Higher Order Inference for Nonlinear Heteroscedastic Models
2014-04-03 pcg Preconditioned Conjugate Gradient Algorithm for solving Ax=b
2014-04-03 rDVR The rDVR package allows you to start stop and save a video server from within R
2014-04-03 TrackReconstruction Reconstruct animal tracks from magnetometer, accelerometer, depth and optional speed data
2014-04-02 fifer A collection of miscellaneous functions
2014-04-02 kimisc Kirill's miscellaneous functions
2014-04-02 lpint Local polynomial estimators of intensity function or its derivatives
2014-04-02 slam Sparse Lightweight Arrays and Matrices
2014-04-01 tosls Instrumental Variables Two Stage Least Squares estimation
2014-03-31 evdbayes Bayesian Analysis in Extreme Value Theory
2014-03-31 r2d2 Bivariate (Two-Dimensional) Confidence Region and Frequency Distribution
2014-03-31 sparsediscrim Sparse and Regularized Discriminant Analysis
2014-03-31 WrightMap Wright Map: IRT item-person map with ConQuest integration
2014-03-30 partsm Periodic Autoregressive Time Series Models
2014-03-30 TunePareto Multi-objective parameter tuning for classifiers
2014-03-28 aCRM Convenience functions for analytical Customer Relationship Management
2014-03-28 EMA Easy Microarray data Analysis
2014-03-28 FacPad Bayesian Sparse Factor Analysis model for the inference of pathways responsive to drug treatment
2014-03-28 FinTS Companion to Tsay (2005) Analysis of Financial Time Series
2014-03-28 GraphPCA GraphPCA, Graphical tools of histogram PCA
2014-03-28 invGauss Threshold regression that fits the (randomized drift) inverse Gaussian distribution to survival data
2014-03-28 MMMS Multi-Marker Molecular Signature for Treatment-specific Subgroup Identification
2014-03-28 pdmod Proximal/distal modeling framework for Pavlovian conditioning phenomena
2014-03-28 polyaAeppli Implementation of the Polya-Aeppli distribution
2014-03-27 iFad An integrative factor analysis model for drug-pathway association inference
2014-03-26 Rphylip An R interface for PHYLIP
2014-03-26 SubLasso Gene selection using Lasso for Microarray data with user-defined genes fixed in model
2014-03-25 clValid Validation of Clustering Results
2014-03-25 CMF Collective matrix factorization
2014-03-25 Devore7 Data sets from Devore's "Prob and Stat for Eng (7th ed)"
2014-03-25 ivfixed Instrumental fixed effect panel data model
2014-03-25 mcga Machine coded genetic algorithms for real-valued optimization problems
2014-03-24 ccgarch Conditional Correlation GARCH models
2014-03-24 CCpop One and two locus GWAS of binary phenotype with case-control-population design
2014-03-24 lsdv Least square dummy variable regression
2014-03-24 OutlierDC Outlier Detection using quantile regression for Censored Data
2014-03-22 BiDimRegression Calculates the bidimensional regression between two 2D configurations
2014-03-22 dna Differential Network Analysis
2014-03-22 fbati Gene by Environment Interaction and Conditional Gene Tests for Nuclear Families
2014-03-22 kintone kintone REST client package for R
2014-03-22 RND Risk Neutral Density Extraction Package
2014-03-21 caschrono Séries temporelles avec R - Méthodes et cas
2014-03-21 MARSS Multivariate Autoregressive State-Space Modeling
2014-03-21 PwrGSD Power in a Group Sequential Design
2014-03-21 Stack Stylized concatenation of data.frames or ffdfs
2014-03-20 AmpliconDuo Statistical Analysis Of Amplicon Data Of The Same Sample To Identify Artefacts
2014-03-20 deepnet deep learning toolkit in R
2014-03-20 gIPFrm Generalized Iterative Proportional Fitting for Relational Models
2014-03-20 Paneldata Linear models for panel data
2014-03-20 pspearman Spearman's rank correlation test
2014-03-19 BIPOD BIPOD (Bayesian Inference for Partially Observed diffusions)
2014-03-19 fontcm Computer Modern font for use with extrafont package
2014-03-19 PKreport A reporting pipeline for checking population pharmacokinetic model assumption
2014-03-19 PoisNor Simultaneous generation of multivariate data with Poisson and normal marginals
2014-03-19 resemble Regression and similarity evaluation for memory-based learning in spectral chemometrics
2014-03-18 brainR Helper functions to misc3d and rgl packages for brain imaging
2014-03-18 comato Analysis of Concept Maps
2014-03-18 tractor.base A package for reading, manipulating and visualising magnetic resonance images
2014-03-17 date Functions for handling dates
2014-03-17 EBS Exact Bayesian Segmentation
2014-03-17 IPMpack Builds and analyses Integral Projection Models (IPMs)
2014-03-17 plot3Drgl Plotting multi-dimensional data - using rgl
2014-03-17 uplift Uplift Modeling
2014-03-15 plot2groups Plot scatter points for two groups of values
2014-03-15 sbioPN sbioPN: Simulation of deterministic and stochastic spatial biochemical reaction networks using Petri Nets
2014-03-15 ssmrob Robust estimation and inference in sample selection models
2014-03-14 gof Model-diagnostics based on cumulative residuals
2014-03-14 pensim Simulation of high-dimensional data and parallelized repeated penalized regression
2014-03-14 qtlnet Causal Inference of QTL Networks
2014-03-14 ykmeans K-means using a target variable
2014-03-13 PharmPow Pharmacometric Power calculations for mixed study designs
2014-03-12 binomlogit Efficient MCMC for Binomial Logit Models
2014-03-12 gmt Interface between GMT Map-Making Software and R
2014-03-12 itertools Iterator Tools
2014-03-12 LIStest Tests of independence based on the Longest Increasing Subsequence
2014-03-12 normtest Tests for Normality
2014-03-12 plotMCMC MCMC Diagnostic Plots
2014-03-12 scape Statistical Catch-at-Age Plotting Environment
2014-03-12 sparsenet Fit sparse linear regression models via nonconvex optimization
2014-03-11 MEMSS Data sets from Mixed-effects Models in S
2014-03-11 mlmRev Examples from Multilevel Modelling Software Review
2014-03-11 SASmixed Data sets from "SAS System for Mixed Models"
2014-03-10 hqmisc Miscellaneous convenience functions and dataset
2014-03-10 hrr Horizontal rule for the R language
2014-03-10 metRology Support for metrological applications
2014-03-10 relax relax – R Editor for Literate Analysis and lateX
2014-03-10 XML2R EasieR XML data collection
2014-03-09 BurStFin Burns Statistics Financial
2014-03-09 gpairs gpairs: The Generalized Pairs Plot
2014-03-09 gRapHD Efficient selection of undirected graphical models for high-dimensional datasets
2014-03-09 regsubseq Detect and Test Regular Sequences and Subsequences
2014-03-09 spatialsegregation Segregation measures for multitype spatial point patterns
2014-03-09 tmle Targeted Maximum Likelihood Estimation
2014-03-07 CPHshape Find the maximum likelihood estimator of the shape constrained hazard baseline and the effect parameters in the Cox proportional hazards model
2014-03-07 doRNG Generic Reproducible Parallel Backend for foreach Loops
2014-03-07 geneSignatureFinder A Gene-signatures finder tools
2014-03-07 gptk Gaussian Processes Tool-Kit
2014-03-07 Jmisc Julian Miscellaneous Function
2014-03-07 Momocs Shape Analysis of Outlines
2014-03-07 svd Interfaces to various state-of-art SVD and eigensolvers
2014-03-07 svyPVpack A package for complex surveys including plausible values
2014-03-06 bdpv Inference and design for predictive values in binary diagnostic tests
2014-03-06 covreg A simultaneous regression model for the mean and covariance
2014-03-06 eiwild Ecological Inference with individual and aggregate data
2014-03-06 flowfield Forecasts future values of a univariate time series
2014-03-06 mixRasch Mixture Rasch Models with JMLE
2014-03-06 multiDimBio Multivariate Analysis and Visualization for Biological Data
2014-03-06 MultiOrd Generation of multivariate ordinal variates
2014-03-06 polySegratio Simulate and test marker dosage for dominant markers in autopolyploids
2014-03-06 polySegratioMM Bayesian mixture models for marker dosage in autopolyploids
2014-03-06 rngtools Utility functions for working with Random Number Generators
2014-03-05 aws Adaptive Weights Smoothing
2014-03-05 bagRboostR Ensemble bagging and boosting classifiers
2014-03-05 expectreg Expectile and Quantile Regression
2014-03-05 FDRreg False discovery rate regression
2014-03-05 hbim Hill/Bliss Independence Model for Combination Vaccines
2014-03-05 inarmix Mixture models for longitudinal count data
2014-03-05 picante R tools for integrating phylogenies and ecology
2014-03-04 bioPN Simulation of deterministic and stochastic biochemical reaction networks using Petri Nets
2014-03-04 factorplot factorplot
2014-03-04 insol Solar Radiation
2014-03-04 sesem Spatially explicit structural equation modeling
2014-03-04 Table1Heatmap Table 1 Heatmap
2014-03-04 weights Weighting and Weighted Statistics
2014-03-03 bestglm Best Subset GLM
2014-03-03 ICGE Estimation of number of clusters and identification of atypical units
2014-03-03 RADami R Package for Phylogenetic Analysis of RADseq Data
2014-03-03 simFrame Simulation framework
2014-03-03 SSsimple State space models
2014-03-03 svIDE SciViews GUI API - IDE and code editor functions
2014-03-03 widals Weighting by Inverse Distance with Adaptive Least Squares for Massive Space-Time Data
2014-03-02 optimbase R port of the Scilab optimbase module
2014-03-02 partitionMetric Compute a distance metric between two partitions of a set
2014-03-02 pastecs Package for Analysis of Space-Time Ecological Series
2014-03-02 SciViews SciViews GUI API - Main package
2014-03-02 svDialogstcltk SciViews GUI API - Dialog boxes using Tcl/Tk
2014-03-02 svGUI SciViews GUI API - Functions to manage GUIs
2014-03-02 svHttp SciViews GUI API - R HTTP server
2014-03-02 svMisc SciViews GUI API - Miscellaneous functions
2014-03-02 svSocket SciViews GUI API - R Socket Server
2014-03-02 svTools SciViews GUI API - Tools (wrapper for packages tools and codetools)
2014-03-02 svUnit SciViews GUI API - Unit testing
2014-03-02 svWidgets SciViews GUI API - Widgets & Windows
2014-03-02 zooimage Analysis of numerical zooplankton images
2014-03-01 aqr Interface methods to use with an ActiveQuant Master Server
2014-03-01 CoImp Copula based imputation method
2014-03-01 mcll Monte Carlo Local Likelihood Estimation
2014-02-28 anchors Statistical analysis of surveys with anchoring vignettes
2014-02-28 bPeaks bPeaks: an intuitive peak-calling strategy to detect transcription factor binding sites from ChIP-seq data in small eukaryotic genomes
2014-02-28 morgenstemning Color schemes compatible with red-green color perception difficulties
2014-02-28 rpanel Simple interactive controls for R using the tcltk library
2014-02-27 GDELTtools Download, slice, and normalize GDELT data
2014-02-27 isocir Isotonic Inference for Circular data
2014-02-27 panelAR Estimation of Linear AR(1) Panel Data Models with Cross-Sectional Heteroskedasticity and/or Correlation
2014-02-26 ALKr Generate Age-Length Keys for fish populations
2014-02-26 pencopula Flexible Copula Density Estimation with Penalized Hierarchical B-Splines
2014-02-26 rvgtest Tools for Analyzing Non-Uniform Pseudo-Random Variate Generators
2014-02-26 scrypt scrypt key derivation functions for R
2014-02-26 seas Seasonal analysis and graphics, especially for climatology
2014-02-26 snp.plotter snp.plotter
2014-02-25 CTT Classical Test Theory Functions
2014-02-25 HMMpa Analysing accelerometer data using hidden Markov models
2014-02-25 saemix Stochastic Approximation Expectation Maximization (SAEM) algorithm
2014-02-25 SimuChemPC Simulation process of 4 selection methods in predicting chemical potent compounds
2014-02-24 biom An interface package (beta) for the BIOM file format
2014-02-24 fractaldim Estimation of fractal dimensions
2014-02-24 gridBase Integration of base and grid graphics
2014-02-24 lmodel2 Model II Regression
2014-02-24 msir Model-based Sliced Inverse Regression
2014-02-24 MSwM Fitting Markov Switching Models
2014-02-24 mvc Multi-View Clustering
2014-02-24 RegClust Cluster analysis via regression coefficients
2014-02-24 RYoudaoTranslate R package provide functions to translate English words into Chinese
2014-02-24 StableEstim Estimate the 4 parameters of stable law using different methods
2014-02-24 tabplot Tableplot, a visualization of large datasets
2014-02-23 EMMIXcontrasts Contrasts in mixed effects for EMMIX model with random effects
2014-02-23 psData A package to download regularly maintained political science data sets and make commonly used, but infrequently updated variables based on this data
2014-02-22 blender Analyze biotic homogenization of landscapes
2014-02-22 bursts Markov model for bursty behavior in streams
2014-02-22 hcci Interval estimation for the parameters of linear models with heteroskedasticity (Wild Bootstrap)
2014-02-22 plumbr Mutable and dynamic data models
2014-02-21 arf3DS4 Activated Region Fitting, fMRI data analysis (3D)
2014-02-21 dynlm Dynamic Linear Regression
2014-02-21 eulerian eulerian: A package to find eulerian paths from graphs
2014-02-21 longCatEDA Package for Plotting Categorical Longitudinal and Time-Series Data
2014-02-21 lpmodeler Modeler for linear programs (LP) and mixed integer linear programs (MILP)
2014-02-21 ncdf4.helpers Helper functions for use with the ncdf4 package
2014-02-21 RDieHarder R interface to the dieharder RNG test suite
2014-02-21 SPAr Perform rare variants association analysis based on summation of partition approaches
2014-02-21 zendeskR Zendesk API Wrapper
2014-02-20 ARTP Gene and Pathway p-values computed using the Adaptive Rank Truncated Product
2014-02-20 denstrip Density strips and other methods for compactly illustrating distributions
2014-02-20 DiagTest3Grp Diagnostic test summary measures for three ordinal groups
2014-02-20 diffusionMap Diffusion map
2014-02-20 lorec LOw Rand and sparsE Covariance matrix estimation
2014-02-20 mixreg Functions to fit mixtures of regressions
2014-02-20 OLScurve OLS growth curve trajectories
2014-02-20 RFreak R/FrEAK interface
2014-02-19 mGSZ Gene set analysis based on GSZ-scoring function and asymptotic p-value
2014-02-18 pbdDEMO Programming with Big Data – Demonstrations of pbd Packages
2014-02-18 rfisheries R interface for fisheries data
2014-02-17 bshazard Nonparametric Smoothing of the Hazard Function
2014-02-17 edeR Email Data Extraction Using R
2014-02-17 grppenalty Concave 1-norm and 2-norm group penalty in linear and logistic regression
2014-02-17 praktikum Kvantitatiivsete meetodite praktikumi asjad / Functions used in the course "Quantitative methods in behavioural sciences" (SHPH.00.004), University of Tartu
2014-02-17 RcmdrPlugin.pointG Graphical POINT of view for questionnaire data Rcmdr Plug-In
2014-02-17 turner Turn vectors and lists of vectors into indexed structures
2014-02-16 DTComPair Comparison of Binary Diagnostic Tests in a Paired Study Design
2014-02-16 sdtoolkit Scenario Discovery Tools to Support Robust Decision Making
2014-02-15 CRAC Cosmology R Analysis Code
2014-02-14 prospectr Miscellaneous functions for processing and sample selection of vis-NIR diffuse reflectance data
2014-02-14 surface Fitting Hansen Models to Investigate Convergent Evolution
2014-02-13 KATforDCEMRI Kinetic analysis and visualization of DCE-MRI data
2014-02-13 rsae Robust Small Area Estimation
2014-02-13 wrspathrow Functions for working with Worldwide Reference System (WRS)
2014-02-12 bio.infer Predict environmental conditions from biological observations
2014-02-12 ecosim Toolbox for Aquatic Ecosystem Modeling
2014-02-12 mcr Method Comparison Regression
2014-02-12 MLCM Maximum Likelihood Conjoint Measurement
2014-02-12 packdep Mapping dependencies among R packages
2014-02-12 QCGWAS Quality Control of Genome Wide Association Study results
2014-02-12 SAM Sparse Additive Modelling
2014-02-12 wrspathrowData Data used by the wrspathrow package
2014-02-11 bfa Bayesian Factor Analysis
2014-02-11 chromoR Analysis of chromosomal interactions data (correction, segmentation and comparison)
2014-02-11 dlmodeler Generalized Dynamic Linear Modeler
2014-02-11 frair Functional response analysis in R
2014-02-11 HMMCont Hidden Markov Model for Continuous Observations Processes
2014-02-11 schwartz97 A package on the Schwartz two-factor commodity model
2014-02-10 FKF Fast Kalman Filter
2014-02-10 npst Generalization of Hewitt's Seasonality Test
2014-02-08 FAiR Factor Analysis in R
2014-02-08 phyreg Implements the Phylogenetic Regression of Grafen (1989)
2014-02-07 cpca Methods to perform Common Principal Component Analysis (CPCA)
2014-02-07 gpr A Minimalistic package to apply Gaussian Process in R
2014-02-07 Ruchardet R package to detect character encoding
2014-02-07 SYNCSA SYNCSA - Analysis of functional and phylogenetic patterns in metacommunities
2014-02-06 easynls Easy nonlinear model
2014-02-06 VecStatGraphs2D Vector analysis using graphical and analytical methods in 2D
2014-02-05 paf Attributable Fraction Function for Censored Survival Data
2014-02-05 StrainRanking Ranking of pathogen strains
2014-02-04 depmixS4 Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4
2014-02-04 hydroGOF Goodness-of-fit functions for comparison of simulated and observed hydrological time series
2014-02-03 MetABEL Meta-analysis of genome-wide SNP association results
2014-02-03 pmclust Parallel Model-Based Clustering
2014-02-02 optimsimplex R port of the Scilab optimsimplex module
2014-02-01 SCBmeanfd Simultaneous Confidence Bands for the Mean of Functional Data
2014-02-01 vbdm Variational Bayes Discrete Mixture Model
2014-01-31 bqtl Bayesian QTL mapping toolkit
2014-01-31 EMD Empirical Mode Decomposition and Hilbert Spectral Analysis
2014-01-31 fdaMixed Functional data analysis in a mixed model framework
2014-01-31 naturalsort Natural Ordering
2014-01-31 Pomic Pomic
2014-01-31 rgam Robust Generalized Additive Model
2014-01-31 SBSA Simplified Bayesian Sensitivity Analysis
2014-01-30 mmeta Multivariate Meta-Analysis
2014-01-30 pSI Specificity Index Statistic
2014-01-30 VariABEL Testing of genotypic variance heterogeneity to detect potentially interacting SNP
2014-01-29 lazyData A LazyData Facility
2014-01-29 VoxR Metrics extraction of trees from T-LiDAR data
2014-01-28 CVcalibration Estimation of the Calibration Equation with Error-in Observations
2014-01-28 RapidPolygonLookup Polygon lookup using kd trees
2014-01-28 Rramas Matrix population models
2014-01-27 dualScale Dual Scaling Analysis of Multiple Choice Data
2014-01-27 ebal Entropy reweighting to create balanced samples
2014-01-27 MergeGUI A GUI for Merging Datasets in R
2014-01-27 Synth Synthetic Control Group Method for Comparative Case Studies
2014-01-26 sqliter Connection wrapper to SQLite databases
2014-01-25 gnmf Generalized Non-negative Matrix Factorization Based on Renyi Divergence
2014-01-25 PEMM A Penalized EM algorithm incorporating missing-data mechanism
2014-01-25 RWiener Wiener process distribution functions
2014-01-24 gconcord Concord method for Graphical Model Selection
2014-01-24 LSC Local Statistical Complexity - Automatic Pattern Discovery in Spatio-Temporal Data
2014-01-23 cSFM Covariate-adjusted Skewed Functional Model (cSFM)
2014-01-23 hydroTSM Time series management, analysis and interpolation for hydrological modelling
2014-01-23 interval Weighted Logrank Tests and NPMLE for interval censored data
2014-01-23 irtoys Simple interface to the estimation and plotting of IRT models
2014-01-23 jpeg Read and write JPEG images
2014-01-23 msos Datasets and Functions used in Multivariate Statistics: Old School by John Marden
2014-01-23 pedantics Functions to facilitate power and sensitivity analyses for genetic studies of natural populations
2014-01-23 saws Small-Sample Adjustments for Wald tests Using Sandwich Estimators
2014-01-23 sigclust Statistical Significance of Clustering
2014-01-22 acs Download, manipulate, and present data from the US Census American Community Survey
2014-01-22 BayesSingleSub Computation of Bayes factors for interrupted time-series designs
2014-01-22 Gammareg classic gamma regression: joint modeling of mean and shape parameters
2014-01-22 psyphy Functions for analyzing psychophysical data in R
2014-01-22 RAMpath Structural Equation Modeling using the reticular action model (RAM) Notation
2014-01-22 rateratio.test Exact rate ratio test
2014-01-21 gvlma Global Validation of Linear Models Assumptions
2014-01-21 truncnorm Truncated normal distribution
2014-01-20 HUM compute HUM value and visualize ROC curves
2014-01-19 blockmatrix blockmatrix: Tools to solve algebraic systems with partitioned matrices
2014-01-19 cda Coupled dipole approximation of light scattering by clusters of nanoparticles
2014-01-19 IBHM Approximation using the IBHM method
2014-01-19 ldbounds Lan-DeMets Method for Group Sequential Boundaries
2014-01-19 mfx Marginal Effects, Odds Ratios and Incidence Rate Ratios for GLMs
2014-01-19 RHRV Heart rate variability analysis of ECG data
2014-01-19 RTextTools Automatic Text Classification via Supervised Learning
2014-01-19 simexaft simexaft
2014-01-19 WeightedCluster Clustering of Weighted Data
2014-01-18 HBSTM Hierarchical Bayesian Space-Time models for Gaussian space-time data
2014-01-17 odfWeave Sweave processing of Open Document Format (ODF) files
2014-01-17 SCORER2 SCORER 2.0: an algorithm for distinguishing parallel dimeric and trimeric coiled-coil sequences
2014-01-17 wpp2008 World Population Prospects 2008
2014-01-16 dfexplore Explore data.frames by plotting NA and classes of each variable
2014-01-16 multinbmod Regression analysis of overdispersed correlated count data
2014-01-16 quadrupen Sparsity by Worst-Case Quadratic Penalties
2014-01-16 sm Smoothing methods for nonparametric regression and density estimation
2014-01-15 clustsig Significant Cluster Analysis
2014-01-15 Funclustering A package for functional data clustering
2014-01-15 GWsignif Genome-wide significance for whole genome sequencing studies
2014-01-15 mph Multiscale persistent homology
2014-01-15 OPDOE OPtimal Design Of Experiments
2014-01-15 RAtmosphere Standard Atmospheric profiles
2014-01-14 ICEinfer Incremental Cost-Effectiveness (ICE) Statistical Inference from Two Unbiased Samples
2014-01-14 iDynoR R Analysis package for iDynoMiCS Simulation Results
2014-01-14 linkim Linkage information based genotype imputation method
2014-01-14 RockFab Rock fabric and strain analysis tools
2014-01-14 RXshrink Maximum Likelihood Shrinkage via Generalized Ridge or Least Angle Regression
2014-01-14 sna Tools for Social Network Analysis
2014-01-13 MF Mitigated Fraction
2014-01-13 TimeMachine Time Machine
2014-01-11 DSBayes Bayesian subgroup analysis in clinical trials
2014-01-11 kst Knowledge Space Theory
2014-01-10 citbcmst CIT Breast Cancer Molecular SubTypes Prediction
2014-01-10 citccmst CIT Colon Cancer Molecular SubTypes Prediction
2014-01-10 jointPm Risk estimation using the joint probability method
2014-01-10 networkTomography Tools for network tomography
2014-01-10 plRasch Log Linear by Linear Association models and Rasch family models by pseudolikelihood estimation
2014-01-10 poLCA Polytomous variable Latent Class Analysis
2014-01-09 cwm Cluster Weighted Models by EM algorithm
2014-01-09 dagR R functions for directed acyclic graphs
2014-01-09 gpmap Analysing and plotting genotype-phenotype maps
2014-01-08 CADFtest This package performs the CADF unit root test proposed in Hansen (1995)
2014-01-08 GRaF Species distribution modelling using latent Gaussian random fields
2014-01-08 PGM2 Recursive method for construction of nested resolvable designs and uniform designs associated
2014-01-08 WhatIf WhatIf: Software for Evaluating Counterfactuals
2014-01-07 AdMit Adaptive Mixture of Student-t distributions
2014-01-07 rapportools Miscellaneous (stats) helper functions with sane defaults for reporting
2014-01-07 RVowpalWabbit R interface to the Vowpal Wabbit
2014-01-07 shuffle The shuffle estimator for explainable variance
2014-01-07 smatr (Standardised) Major Axis Estimation and Testing Routines
2014-01-07 streamR Access to Twitter Streaming API via R
2014-01-06 oem Orthogonalizing Expectation maximization
2014-01-06 RFOC Graphics for Spherical Distributions and Earthquake Focal Mechanisms
2014-01-06 robcor Robust Correlations
2014-01-06 sfa Stochastic Frontier Analysis
2014-01-06 TeachNet Fits neural networks to learn about back propagation
2014-01-05 glmmGS Gauss-Seidel Generalized Linear Mixed Model solver
2014-01-05 RClimMAWGEN RClimMAWGEN (R Climate Index Multi-site Auto-regressive Weather GENeretor): a package to generate time series of climate indices from RMAWGEN generations
2014-01-04 DESnowball Bagging with Distance-based Regression for Differential Gene Expression Analyses
2014-01-04 SWATmodel A multi-OS implementation of the TAMU SWAT model
2014-01-03 AdaptiveSparsity Adaptive Sparsity Models
2014-01-03 compHclust Complementary Hierarchical Clustering
2014-01-03 cosmosR cosmosR
2014-01-03 fractal Fractal Time Series Modeling and Analysis
2014-01-03 glmnetcr Fit a penalized constrained continuation ratio model for predicting an ordinal response
2014-01-03 glmpathcr Fit a penalized continuation ratio model for predicting an ordinal response
2014-01-03 qrfactor Simultaneous simulation of Q and R mode factor analyses with Spatial data
2014-01-02 binom Binomial Confidence Intervals For Several Parameterizations
2014-01-02 BioGeoBEARS BioGeography with Bayesian (and Likelihood) Evolutionary Analysis in R Scripts
2014-01-02 FAMT Factor Analysis for Multiple Testing (FAMT) : simultaneous tests under dependence in high-dimensional data
2014-01-02 glmmBUGS Generalised Linear Mixed Models and Spatial Models with WinBUGS, BRugs, or OpenBUGS
2014-01-02 PBImisc A set of datasets used in my classes or in the book ,,Modele liniowe i mieszane w R, wraz z przykladami w analizie danych”
2014-01-02 PedCNV An implementation for association analysis with CNV data
2014-01-02 robustgam Robust Estimation for Generalized Additive Models
2014-01-02 VIMGUI Visualization and Imputation of Missing Values
2014-01-02 xts eXtensible Time Series
2014-01-01 mmm an R package for analyzing multivariate longitudinal data with multivariate marginal models
2014-01-01 PLRModels Statistical inference in partial linear regression models
2013-12-31 fitDRC Fitting Density Ratio Classes
2013-12-31 missForest Nonparametric Missing Value Imputation using Random Forest
2013-12-31 mmm2 Multivariate marginal models with shared regression parameters
2013-12-31 texmex Statistical modelling of extreme values
2013-12-31 TiddlyWikiR Create dynamic reports using a TiddlyWiki template
2013-12-30 dtt Discrete Trigonometric Transforms
2013-12-30 financial Solving financial problems in R
2013-12-30 mblm Median-Based Linear Models
2013-12-30 moonsun Basic astronomical calculations with R
2013-12-30 PIGE Self contained gene set analysis for gene- and pathway-environment interaction analysis
2013-12-30 seawaveQ U.S. Geological Survey seawaveQ model
2013-12-30 wmtsa Wavelet Methods for Time Series Analysis
2013-12-28 acm4r Align-and-Count Method comparisons of RFLP data
2013-12-28 mhurdle Multiple hurdle Tobit models
2013-12-28 pglm panel generalized linear model
2013-12-28 rgabriel Gabriel Multiple Comparison Test and Plot the Confidence Interval on Barplot
2013-12-27 clustrd Methods for joint dimension reduction and clustering
2013-12-27 extfunnel Additional Funnel Plot Augmentations
2013-12-27 GenABEL genome-wide SNP association analysis
2013-12-27 GenABEL.data Package contains data which is used by GenABEL example and test functions
2013-12-27 mlogit multinomial logit model
2013-12-27 ROC632 Construction of diagnostic or prognostic scoring system and internal validation of its discriminative capacities based on ROC curve and 0.633+ boostrap resampling
2013-12-27 saves Fast load variables
2013-12-27 SIN A SINful Approach to Selection of Gaussian Graphical Markov Models
2013-12-27 spider Species Identity and Evolution in R
2013-12-27 truncreg Truncated Gaussian Regression Models
2013-12-26 cpk Clinical Pharmacokinetics
2013-12-26 mycobacrvR Integrative immunoinformatics for Mycobacterial diseases in R platform
2013-12-24 evt0 Mean of order p, peaks over random threshold Hill and high quantile estimates
2013-12-24 RcmdrPlugin.sos Efficiently search the R help pages
2013-12-24 safeBinaryRegression Safe Binary Regression
2013-12-24 TSTutorial Fitting and Predict Time Series Interactive Laboratory
2013-12-23 audio Audio Interface for R
2013-12-23 MigClim Implementing dispersal into species distribution models
2013-12-23 SHIP SHrinkage covariance Incorporating Prior knowledge
2013-12-21 JGR JGR - Java GUI for R
2013-12-21 pa Performance Attribution for Equity Portfolios
2013-12-21 pmcgd pmcgd
2013-12-21 RSofia Port of sofia-ml (http://code.google.com/p/sofia-ml/) to R
2013-12-20 AdequacyModel Adequacy of probabilistic models and generation of pseudo-random numbers
2013-12-20 ltm Latent Trait Models under IRT
2013-12-20 ROCt Time-dependent ROC curve estimation and adaptation to the relative survival context
2013-12-19 AssotesteR Statistical Tests for Genetic Association Studies
2013-12-19 BBRecapture Bayesian Behavioural Capture-Recapture Models
2013-12-19 colortools Tools for colors in a Hue-Saturation-Value (HSV) color model
2013-12-19 minPtest Gene region-level testing procedure for SNP data, using the min P test resampling approach
2013-12-19 TilePlot Characterization of functional genes in complex microbial communities using tiling DNA microarrays
2013-12-18 bvls The Stark-Parker algorithm for bounded-variable least squares
2013-12-18 cellVolumeDist Functions to fit cell volume distributions and thereby estimate cell growth rates and division times
2013-12-18 FindMinIC Find Models with Minimum IC
2013-12-18 HWEBayes Bayesian investigation of Hardy-Weinberg Equilibrium via estimation and testing
2013-12-18 maxlike Model species distributions by estimating the probability of occurrence using presence-only data
2013-12-18 mvna Nelson-Aalen estimator of the cumulative hazard in multistate models
2013-12-18 PropClust Propensity Clustering and Decomposition
2013-12-18 RAppArmor Interfaces to Linux and AppArmor security methods
2013-12-18 RcmdrPlugin.lfstat Rcmdr Plug-In for low flow analysis
2013-12-18 scalreg Scaled sparse linear regression
2013-12-18 VHDClassification Discrimination/Classification in very high dimension with linear and quadratic rules
2013-12-18 wavelets A package of functions for computing wavelet filters, wavelet transforms and multiresolution analyses
2013-12-18 ycinterextra Yield curve or zero-coupon prices interpolation and extrapolation
2013-12-17 Demerelate Functions to calculate relatedness on diploid genetic data
2013-12-17 fBonds Bonds and Interest Rate Models
2013-12-17 fExtremes Rmetrics - Extreme Financial Market Data
2013-12-17 g.data Delayed-Data Packages
2013-12-17 iRefR iRefIndex Manager
2013-12-17 reportRx Tools for automatically generating reproducible clinical report
2013-12-17 spacom Spatially weighted context data for multilevel modelling
2013-12-16 pbdDMAT Programming with Big Data – Distributed Matrix Methods
2013-12-16 RobRSVD Robust Regularized Singular Value Decomposition
2013-12-16 simone Statistical Inference for MOdular NEtworks (SIMoNe)
2013-12-15 fcd Fused Community Detection
2013-12-15 lpc Lassoed principal components for testing significance of features
2013-12-15 MVB Mutivariate Bernoulli log-linear model
2013-12-15 NetSim A Social Networks Simulation Tool in R
2013-12-15 svdvisual SVD visualization tools
2013-12-14 DunnettTests Software implementation of step-down and step-up Dunnett test procedures
2013-12-14 fortunes R Fortunes
2013-12-14 MiST Mixed effects Score Test for continuous outcomes
2013-12-14 pbdBASE Programming with Big Data – Base Wrappers for Distributed Matrices
2013-12-13 adhoc calculate ad hoc distance thresholds for DNA barcoding identification
2013-12-13 amei Adaptive Management of Epidemiological Interventions
2013-12-13 clusterPower Power calculations for cluster-randomized and cluster-randomized crossover trials
2013-12-13 HIV.LifeTables HIV calibrated model life tables for countries with generalized HIV epidemics
2013-12-13 Kmisc Kevin Miscellaneous
2013-12-13 logconcens Maximum likelihood estimation of a log-concave density based on censored data
2013-12-13 Oncotree Estimating oncogenetic trees
2013-12-13 skda Sparse (Multicategory) Kernel Discriminant Analysis
2013-12-13 survrec Survival analysis for recurrent event data
2013-12-12 BACCO Bayesian Analysis of Computer Code Output (BACCO)
2013-12-12 betapart Partitioning beta diversity into turnover and nestedness components
2013-12-12 dmt Dependency Modeling Toolkit
2013-12-12 gcbd GPU/CPU Benchmarking in Debian-based systems
2013-12-12 languageR Data sets and functions with "Analyzing Linguistic Data: A practical introduction to statistics"
2013-12-12 mleur Maximum likelihood unit root test
2013-12-12 multitable Simultaneous manipulation of multiple arrays of data, with data.list objects
2013-12-12 Myrrix Interface to Myrrix. Myrrix is a complete, real-time, scalable clustering and recommender system, evolved from Apache Mahout
2013-12-12 rworldmap Mapping global data, vector and raster
2013-12-12 sealasso Standard Error Adjusted Adaptive Lasso
2013-12-12 SeleMix Selective Editing via Mixture models
2013-12-12 untb ecological drift under the UNTB
2013-12-11 aidar Tools for reading AIDA (http://aida.freehep.org/) files into R
2013-12-11 diffractometry Baseline identification and peak decomposition for x-ray diffractograms
2013-12-11 etable Easy Table
2013-12-11 ExPosition Exploratory analysis with the singular value decomposition
2013-12-11 giRaph The giRaph package for graph representation in R
2013-12-11 grImport Importing Vector Graphics
2013-12-11 InPosition Inference Tests for ExPosition
2013-12-11 mathgraph Directed and undirected graphs
2013-12-11 mlogitBMA Bayesian Model Averaging for Multinomial Logit Models
2013-12-11 pgs Precision of Geometric Sampling
2013-12-11 prob Elementary Probability on Finite Sample Spaces
2013-12-11 rpartitions Code for integer partitioning
2013-12-11 smfsb SMfSB 2e: Stochastic Modelling for Systems Biology, second edition
2013-12-11 SOAR Memory management in R by delayed assignments
2013-12-11 TExPosition Two-table ExPosition
2013-12-11 TInPosition Inference tests for TExPosition
2013-12-10 aylmer A generalization of Fisher's exact test
2013-12-10 Bessel Bessel – Bessel Functions Computations and Approximations
2013-12-10 bfp Bayesian Fractional Polynomials
2013-12-10 binomSamSize Confidence intervals and sample size determination for a binomial proportion under simple random sampling and pooled sampling
2013-12-10 CCM Correlation classification method (CCM)
2013-12-10 cloudUtil Cloud Util Plots
2013-12-10 conics Plot Conics
2013-12-10 corclass Correlational Class Analysis
2013-12-10 CVST Fast Cross-Validation via Sequential Testing
2013-12-10 fTrading Technical Trading Analysis
2013-12-10 fxregime Exchange Rate Regime Analysis
2013-12-10 hyperdirichlet A generalization of the Dirichlet distribution
2013-12-10 iBUGS An Interface to WinBUGS/OpenBUGS/JAGS by gWidgets
2013-12-10 mlegp Maximum Likelihood Estimates of Gaussian Processes
2013-12-10 pathmox Pathmox Approach of Segmentation Trees in Partial Least Squares Path Modeling
2013-12-10 prettyGraphs publication-quality graphics
2013-12-10 SII Calculate ANSI S3.5-1997 Speech Intelligibility Index
2013-12-10 sparseLTSEigen RcppEigen back end for sparse least trimmed squares regression
2013-12-10 tdthap TDT tests for extended haplotypes
2013-12-09 calibrator Bayesian calibration of complex computer codes
2013-12-09 DIME DIME (Differential Identification using Mixture Ensemble)
2013-12-09 vrmlgen Generate 3D visualizations for data exploration on the web
2013-12-08 approximator Bayesian prediction of complex computer codes
2013-12-08 discrimARTs Discrimination of Alternative Reproductive Tactics (ARTs)
2013-12-07 elrm Exact Logistic Regression via MCMC
2013-12-07 hflights Flights that departed Houston in 2011
2013-12-07 sortinghat sortinghat
2013-12-06 assertthat Easy pre and post assertions
2013-12-06 NADA Nondetects And Data Analysis for environmental data
2013-12-05 Brobdingnag Very large numbers in R
2013-12-05 DynamicDistribution Dynamically visualized probability distributions and their moments
2013-12-05 hddplot Use known groups in high-dimensional data to derive scores for plots
2013-12-05 MaXact Exact max-type Cochran-Armitage trend test(CATT)
2013-12-05 multivator A multivariate emulator
2013-12-05 ref References for R
2013-12-05 Sample.Size Sample size calculation
2013-12-05 snpStatsWriter Flexible writing of snpStats objects to flat files
2013-12-04 obs.agree An R package to assess agreement between observers
2013-12-03 ADM3 An Interpretation of the ADM method - automated detection algorithm
2013-12-03 ClustOfVar Clustering of variables
2013-12-03 DEMEtics Evaluating the genetic differentiation between populations based on Gst and D values
2013-12-03 ecodist Dissimilarity-based functions for ecological analysis
2013-12-03 Interpol.T Hourly interpolation of multiple temperature daily series
2013-12-03 iplots iPlots - interactive graphics for R
2013-12-03 netClass netClass: An R Package for Network-Based Biomarker Discovery
2013-12-03 png Read and write PNG images
2013-12-03 RCassandra R/Cassandra interface
2013-12-02 dvn Access to The Dataverse Network APIs
2013-12-02 GrassmannOptim Grassmann Manifold Optimization
2013-12-02 mRm An R package for conditional maximum likelihood estimation in mixed Rasch models
2013-12-02 PoiClaClu Classification and clustering of sequencing data based on a Poisson model
2013-12-02 superMDS Implements the supervised multidimensional scaling (superMDS) proposal of Witten and Tibshirani (2011)
2013-12-01 exptest Tests for Exponentiality
2013-11-30 adephylo adephylo: exploratory analyses for the phylogenetic comparative method
2013-11-29 caper Comparative Analyses of Phylogenetics and Evolution in R
2013-11-29 cycloids cycloids
2013-11-28 aml Adaptive Mixed LASSO
2013-11-28 ergm.userterms User-specified terms for the statnet suite of packages
2013-11-28 LCFdata Data sets for package “LMERConvenienceFunctions”
2013-11-28 ROI R Optimization Infrastructure
2013-11-28 ROI.plugin.glpk ROI-plugin GLPK
2013-11-28 ROI.plugin.quadprog ROI-plugin quadprog
2013-11-28 ROI.plugin.symphony ROI-plugin symphony
2013-11-27 prognosticROC Prognostic ROC curves for evaluating the predictive capacity of a binary test
2013-11-26 asd Simulations for adaptive seamless designs
2013-11-26 hda Heteroscedastic Discriminant Analysis
2013-11-26 LICORS Light Cone Reconstruction of States - Predictive State Estimation From Spatio-Temporal Data
2013-11-25 dils Data-Informed Link Strength. Combine multiple-relationship networks into a single weighted network. Impute (fill-in) missing network links
2013-11-25 FastImputation Learn from training data then quickly fill in missing data
2013-11-25 frontiles Partial Frontier Efficiency Analysis
2013-11-25 humanFormat Human-friendly formatting functions
2013-11-25 intamap procedures for automated interpolation
2013-11-24 boxplotdbl Double Box Plot for Two-Axes Correlation
2013-11-24 bpca Biplot of Multivariate Data Based on Principal Components Analysis
2013-11-23 demoKde Kernel Density Estimation for Demonstration Purposes
2013-11-23 growthmodels Nonlinear Growth Models
2013-11-22 BayesXsrc R Package Distribution of the BayesX C++ Sources
2013-11-22 DoubleCone Test against parametric regression function
2013-11-22 GMMBoost Likelihood-based Boosting for Generalized mixed models
2013-11-22 msgpackR A library to serialize or unserialize data in MessagePack format
2013-11-21 BSagri Statistical methods for safety assessment in agricultural field trials
2013-11-21 lestat A package for LEarning STATistics
2013-11-21 osmar OpenStreetMap and R
2013-11-21 PubBias Performs simulation study to look for publication bias, using a technique described by Ioannidis and Trikalinos; Clin Trials. 2007;4(3):245-53
2013-11-20 magic create and investigate magic squares
2013-11-20 PearsonDS Pearson Distribution System
2013-11-20 vegclust Fuzzy clustering of vegetation data
2013-11-20 witness This package fits eyewitness data using Clark's (2003) WITNESS model
2013-11-19 gcdnet LASSO and (adaptive) Elastic-Net penalized least squares, logistic regression, HHSVM and squared hinge loss SVM using a fast GCD algorithm
2013-11-19 mlDNA Machine Learning-based Differential Network Analysis of Transcriptome Data
2013-11-19 somebm some Brownian motions simulation functions
2013-11-19 VLF Frequency Matrix Approach for Assessing Very Low Frequency Variants in Sequence Records
2013-11-18 codadiags Markov chain Monte Carlo burn-in based on "bridge" statistics
2013-11-18 eqs2lavaan EQS Output Conversion to lavaan Functions
2013-11-18 MetStaT Statistical metabolomics tools
2013-11-18 rbefdata BEFdata R package
2013-11-17 glmmML Generalized linear models with clustering
2013-11-17 vscc Variable selection for clustering and classification
2013-11-16 contrast A collection of contrast methods
2013-11-16 grade Binary Grading functions for R
2013-11-15 DiceView Plot methods for computer experiments design and surrogate
2013-11-15 DiscriMiner Tools of the Trade for Discriminant Analysis
2013-11-15 PropScrRand Propensity score methods for assigning treatment in randomized trials
2013-11-15 VizOR Graphical visualization tools for complex observational data with focus on health sciences (VizOR)
2013-11-14 maxent Low-memory Multinomial Logistic Regression with Support for Text Classification
2013-11-14 tester Tests and checks characteristics of R objects
2013-11-13 diaplt Beads Summary Plot of Ranges
2013-11-13 EMMIXskew The EM Algorithm and Skew Mixture Distribution
2013-11-13 HaploSim Functions to simulate haplotypes
2013-11-13 mreg Fits regression models when the outcome is partially missing
2013-11-13 Rambo The Random Subgraph Model
2013-11-12 colorfulVennPlot Plot and add custom coloring to Venn diagrams for 2-dimensional, 3-dimensional and 4-dimensional data
2013-11-12 distory Distance Between Phylogenetic Histories
2013-11-12 robustfa An Object Oriented Solution for Robust Factor Analysis
2013-11-12 rtf Rich Text Format (RTF) Output
2013-11-11 clv Cluster Validation Techniques
2013-11-11 GenKern Functions for generating and manipulating binned kernel density estimates
2013-11-11 rGammaGamma Gamma convolutions for methylation array background correction
2013-11-10 FusedPCA Community Detection via Fused Principal Component Analysis
2013-11-09 aqfig Functions to help display air quality model output and monitoring data
2013-11-09 dielectric Defines some physical constants and dielectric functions commonly used in optics, plasmonics
2013-11-09 edrGraphicalTools Provides tools for dimension reduction methods
2013-11-08 brglm Bias reduction in binomial-response generalized linear models
2013-11-08 circular Circular Statistics
2013-11-08 quint Qualitative Interaction Trees
2013-11-08 stima Simultaneous Threshold Interaction Modeling Algorithm
2013-11-07 localdepth Local Depth
2013-11-07 pcse Panel-Corrected Standard Error Estimation in R
2013-11-07 SPEI Calculation of the Standardised Precipitation-Evapotranspiration Index
2013-11-06 ABCoptim Implementation of Artificial Bee Colony (ABC) Optimization
2013-11-06 CPMCGLM Correction of the pvalue after multiple coding
2013-11-06 Hotelling Hotelling's T-squared test and variants
2013-11-06 learningr Data and functions to accompany the book "Learning R"
2013-11-06 Rclusterpp Linkable C++ clustering
2013-11-06 RGenetics R packages for genetics research
2013-11-05 comparison Multivariate likelihood ratio calculation and evaluation
2013-11-05 shinyAce Ace editor bindings for Shiny
2013-11-05 sspline Smoothing Splines on the Sphere
2013-11-04 gskat GEE_KM
2013-11-04 isva Independent Surrogate Variable Analysis
2013-11-04 ktsolve Configurable function for solving families of nonlinear equations
2013-11-04 matie Measuring Association and Testing Independence Efficiently
2013-11-04 mvShapiroTest Generalized Shapiro-Wilk test for multivariate normality
2013-11-04 smam Statistical Modeling of Animal Movements
2013-11-04 someMTP Some Multiple Testing Procedures
2013-11-04 termstrc Zero-coupon Yield Curve Estimation
2013-11-03 pedigree Pedigree functions
2013-11-02 prinsimp Finding and plotting simple basis vectors for multivariate data
2013-11-02 RCPmod Regions of common profiles modelling with mixtures-of-experts
2013-11-01 PAGI The package can identify the dysregulated KEGG pathways based on global influence from the internal effect of pathways and crosstalk between pathways
2013-11-01 rgcvpack R Interface for GCVPACK Fortran Package
2013-10-31 ACD Categorical data analysis with complete or missing responses
2013-10-31 CIFsmry Weighted summary of cumulative incidence functions
2013-10-31 DDHFm Variance Stabilization by Data-Driven Haar-Fisz (for Microarrays)
2013-10-31 gllm Generalised log-linear model
2013-10-31 lmf Functions for estimation and inference of selection in age-structured populations
2013-10-31 MRsurv A multiplicative-regression model for relative survival
2013-10-31 sExtinct Calculates the historic date of extinction given a series of sighting events
2013-10-31 SpatialNP Multivariate nonparametric methods based on spatial signs and ranks
2013-10-30 SuppDists Supplementary distributions
2013-10-29 cluster.datasets Cluster Analysis Data Sets
2013-10-28 BayesSAE Bayesian Analysis of Small Area Estimation
2013-10-28 fingerprint Functions to operate on binary fingerprint data
2013-10-28 IPSUR Introduction to Probability and Statistics Using R
2013-10-27 mar1s Multiplicative AR(1) with Seasonal Processes
2013-10-26 clpAPI R Interface to C API of COIN-OR Clp
2013-10-25 CARrampsOcl Reparameterized and marginalized posterior sampling for conditional autoregressive models, OpenCL implementation
2013-10-25 DCL Claims Reserving under the Double Chain Ladder Model
2013-10-25 dgof Discrete Goodness-of-Fit Tests
2013-10-25 hdlm Fitting High Dimensional Linear Models
2013-10-25 kmconfband Kaplan-Meier Simultaneous Confidence Band for the Survivor Function
2013-10-25 SPARQL SPARQL client
2013-10-24 BASIX BASIX: An efficient C/C++ toolset for R
2013-10-24 fastcox Lasso and elastic-net penalized Cox's regression in high dimensions models using the cocktail algorithm
2013-10-24 mcgibbsit Warnes and Raftery's MCGibbsit MCMC diagnostic
2013-10-23 fbRanks Association Football (Soccer) Ranking via Poisson Regression
2013-10-23 globalGSA Global Gene-Set Analysis for Association Studies
2013-10-23 MFHD Multivariate Functional Halfspace Depth
2013-10-22 ACTCD Asymptotic Classification Theory for Cognitive Diagnosis
2013-10-22 HDtweedie The Lasso for the Tweedie's Compound Poisson Model Using an IRLS-BMD Algorithm
2013-10-22 Rmisc Rmisc: Ryan Miscellaneous
2013-10-22 smart Sparse Multivariate Analysis via Rank Transformation
2013-10-22 snapshot Gadget N-body cosmological simulation code snapshot I/O utilities
2013-10-22 sphereplot Spherical plotting
2013-10-22 sss Tools for importing files in the triple-s .(Standard Survey Structure) format
2013-10-22 surveydata Tools to manipulate survey data
2013-10-21 lomb Lomb-Scargle Periodogram
2013-10-21 mQTL Metabolomic Quantitative Trait Locus Mapping
2013-10-21 wavethresh Wavelets statistics and transforms
2013-10-20 RRF Regularized Random Forest
2013-10-19 hdrcde Highest density regions and conditional density estimation
2013-10-18 datautils Support functions for packages VBmix, semisupKernelPCA, and patchPlot
2013-10-18 locits Test of stationarity and localized autocovariance
2013-10-17 OIsurv Survival analysis supplement to OpenIntro guide
2013-10-17 RTConnect Tools for analyzing sales report files of iTunes Connect
2013-10-16 DAAGxtras Data Sets and Functions, supplementary to DAAG
2013-10-16 lxb Fast LXB file reader
2013-10-16 NormalGamma Normal-gamma convolution model
2013-10-16 regpro Nonparametric Regression
2013-10-15 corrplot Visualization of a correlation matrix
2013-10-15 cvq2 Calculate the predictive squared correlation coefficient
2013-10-15 Segmentor3IsBack A Fast Segmentation Algorithm
2013-10-15 zoom A spatial data visualization tool
2013-10-14 costat Time series costationarity determination
2013-10-14 EMMAgeo End-member modelling algorithm and supporting functions for grain-size analysis
2013-10-13 Correlplot A collection of functions for graphing correlation matrices
2013-10-13 shinyRGL Shiny Wrappers for RGL
2013-10-12 cpa Confirmatory Path Analysis through the d-sep tests
2013-10-12 FITSio FITS (Flexible Image Transport System) utilities
2013-10-12 mcGlobaloptim Global optimization using Monte Carlo and Quasi Monte Carlo simulation
2013-10-12 rdd Regression Discontinuity Estimation
2013-10-12 rsig Robust Signature Selection for Survival Outcomes
2013-10-11 GlobalDeviance Global Deviance Permutation Tests
2013-10-11 LOST Missing morphometric data simulation and estimation
2013-10-11 MRwarping Multiresolution time warping for functional data
2013-10-11 OptHedging Estimation of value and hedging strategy of call and put options
2013-10-10 TestSurvRec Statistical tests to compare two survival curves with recurrent events
2013-10-09 binMto Asymptotic simultaneous confidence intervals for many-to-one comparisons of proportions
2013-10-09 ScrabbleScore Calculates Scrabble score for strings
2013-10-08 bmem Mediation analysis with missing data using bootstrap
2013-10-08 caroline A Collection of Database, Data Structure, Visualization, and Utility Functions for R
2013-10-07 censNID censored NID samples
2013-10-07 migration.indices Migration indices
2013-10-05 DAAGbio Data Sets and Functions, for demonstrations with expression arrays and gene sequences
2013-10-05 fdrci Permutation-based FDR Point and Confidence Interval Estimation
2013-10-04 kitagawa Spectral response of water wells to harmonic strain and pressure
2013-10-04 TDD Time-Domain Deconvolution of Seismometer Response
2013-10-03 HEAT Health Effects of Air Pollution and Temperature (HEAT)
2013-10-03 powerAnalysis Power analysis in experimental design
2013-10-03 riv Robust instrumental variables estimator
2013-10-02 SpeciesMix Fit Mixtures of Archetype species
2013-10-01 kulife Datasets and functions from the (now non-existing) Faculty of Life Sciences, University of Copenhagen
2013-10-01 PsumtSim Simulations of grouped responses relative to baseline
2013-09-30 AUC Threshold independent performance measures for probabilistic classifiers
2013-09-30 LCA Localised Co-Dependency Analysis
2013-09-30 ParentOffspring Conduct the Parent-Offspring Test Using Monomorphic SNP Markers
2013-09-30 plan Tools for project planning
2013-09-30 topsis TOPSIS method for multiple-criteria decision making (MCDM)
2013-09-29 coloc Colocalisation tests of two genetic traits
2013-09-29 elliplot Ellipse Summary Plot of Quantiles
2013-09-27 BAYSTAR On Bayesian analysis of Threshold autoregressive model (BAYSTAR)
2013-09-27 FitARMA FitARMA: Fit ARMA or ARIMA using fast MLE algorithm
2013-09-27 MRMR Multivariate Regression Models for Reserving
2013-09-27 rDNA R Bindings for the Discourse Network Analyzer
2013-09-26 ssvd Sparse SVD
2013-09-25 sos Search contributed R packages, sort by package
2013-09-25 SubCultCon Maximum-Likelihood Cultural Consensus Analysis with Sub-Cultures
2013-09-25 wgsea Wilcoxon based gene set enrichment analysis
2013-09-24 NPHMC Sample Size Calculation for the Proportional Hazards Mixture Cure Model