ddpcr: Analysis and Visualization of Droplet Digital PCR in R and on the Web

An interface to explore, analyze, and visualize droplet digital PCR (ddPCR) data in R. This is the first non-proprietary software for analyzing duplex ddPCR data. An interactive tool was also created and is available online to facilitate this analysis for anyone who is not comfortable with using R.

Version: 1.0.1
Depends: R (≥ 3.1.0)
Imports: DT (≥ 0.1), dplyr (≥ 0.4.0), ggplot2 (≥, lazyeval (≥ 0.1.10), magrittr (≥ 1.5), mixtools (≥ 1.0.2), plyr (≥ 1.8.1), readr (≥ 0.1.0), shiny (≥ 0.11.0), shinyjs (≥ 0.4.0)
Suggests: ggExtra (≥ 0.3.0), graphics, grid (≥ 3.2.2), gridExtra (≥ 2.0.0), knitr (≥ 1.7), rmarkdown, stats, testthat (≥ 0.9.1), utils
Published: 2016-02-19
Author: Dean Attali [aut, cre]
Maintainer: Dean Attali <daattali at gmail.com>
BugReports: https://github.com/daattali/ddpcr/issues
License: MIT + file LICENSE
URL: https://github.com/daattali/ddpcr
NeedsCompilation: no
Materials: README
CRAN checks: ddpcr results


Reference manual: ddpcr.pdf
Vignettes: Algorithms in ddpcr analysis
Extending ddpcr by adding new plate types
Package ddpcr
Package source: ddpcr_1.0.1.tar.gz
Windows binaries: r-devel: ddpcr_1.0.1.zip, r-release: ddpcr_1.0.1.zip, r-oldrel: ddpcr_1.0.1.zip
OS X Snow Leopard binaries: r-release: ddpcr_1.0.1.tgz, r-oldrel: not available
OS X Mavericks binaries: r-release: ddpcr_1.0.1.tgz