Sets up and executes a HiSSE model (Hidden State Speciation and Extinction) on a phylogeny and character sets to test for hidden shifts in trait dependent rates of diversification.
| Version: | 1.4 |
| Depends: | ape, deSolve, GenSA, subplex, data.table |
| Imports: | parallel, phytools, methods |
| Suggests: | diversitree, knitr |
| Published: | 2016-01-07 |
| Author: | Jeremy M. Beaulieu, Brian O'Meara |
| Maintainer: | Jeremy Beaulieu <jbeaulieu at nimbios.org> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | yes |
| Materials: | README |
| CRAN checks: | hisse results |
| Reference manual: | hisse.pdf |
| Vignettes: |
Running hisse |
| Package source: | hisse_1.4.tar.gz |
| Windows binaries: | r-devel: hisse_1.4.zip, r-release: hisse_1.4.zip, r-oldrel: hisse_1.4.zip |
| OS X Snow Leopard binaries: | r-release: hisse_1.4.tgz, r-oldrel: hisse_1.0.tgz |
| OS X Mavericks binaries: | r-release: hisse_1.4.tgz |
| Old sources: | hisse archive |