hisse: Hidden State Speciation and Extinction

Sets up and executes a HiSSE model (Hidden State Speciation and Extinction) on a phylogeny and character sets to test for hidden shifts in trait dependent rates of diversification.

Version: 1.4
Depends: ape, deSolve, GenSA, subplex, data.table
Imports: parallel, phytools, methods
Suggests: diversitree, knitr
Published: 2016-01-07
Author: Jeremy M. Beaulieu, Brian O'Meara
Maintainer: Jeremy Beaulieu <jbeaulieu at nimbios.org>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
Materials: README
CRAN checks: hisse results


Reference manual: hisse.pdf
Vignettes: Running hisse
Package source: hisse_1.4.tar.gz
Windows binaries: r-devel: hisse_1.4.zip, r-release: hisse_1.4.zip, r-oldrel: hisse_1.4.zip
OS X Snow Leopard binaries: r-release: hisse_1.4.tgz, r-oldrel: hisse_1.0.tgz
OS X Mavericks binaries: r-release: hisse_1.4.tgz
Old sources: hisse archive