Predicts the presence of signal peptides in eukaryotic protein using hidden semi-Markov models. The implemented algorithm can be accessed from both the command line and GUI.
| Version: | 1.4 |
| Depends: | R (≥ 3.0.0) |
| Imports: | graphics, seqinr, shiny, stats, utils |
| LinkingTo: | Rcpp |
| Suggests: | DT, rmarkdown |
| Published: | 2016-03-03 |
| Author: | Michal Burdukiewicz [cre, aut], Piotr Sobczyk [aut] |
| Maintainer: | Michal Burdukiewicz <michalburdukiewicz at gmail.com> |
| License: | GPL-3 |
| URL: | https://github.com/michbur/signalhsmm |
| NeedsCompilation: | yes |
| Citation: | signalHsmm citation info |
| Materials: | README ChangeLog |
| CRAN checks: | signalHsmm results |
| Reference manual: | signalHsmm.pdf |
| Package source: | signalHsmm_1.4.tar.gz |
| Windows binaries: | r-devel: signalHsmm_1.4.zip, r-release: signalHsmm_1.4.zip, r-oldrel: signalHsmm_1.4.zip |
| OS X Snow Leopard binaries: | r-release: signalHsmm_1.4.tgz, r-oldrel: not available |
| OS X Mavericks binaries: | r-release: signalHsmm_1.4.tgz |
| Old sources: | signalHsmm archive |