CRAN Package Check Results for Package NBPSeq

Last updated on 2016-10-24 23:48:24.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.0 1.57 24.18 25.75 NOTE
r-devel-linux-x86_64-debian-gcc 0.3.0 1.62 24.16 25.79 NOTE
r-devel-linux-x86_64-fedora-clang 0.3.0 45.81 NOTE
r-devel-linux-x86_64-fedora-gcc 0.3.0 43.71 NOTE
r-devel-macos-x86_64-clang 0.3.0 36.97 NOTE
r-devel-windows-ix86+x86_64 0.3.0 15.00 54.00 69.00 NOTE
r-patched-linux-x86_64 0.3.0 1.57 22.73 24.30 NOTE
r-patched-solaris-sparc 0.3.0 269.60 NOTE
r-patched-solaris-x86 0.3.0 54.20 NOTE
r-release-linux-x86_64 0.3.0 1.50 22.19 23.68 NOTE
r-release-osx-x86_64-mavericks 0.3.0 NOTE
r-release-windows-ix86+x86_64 0.3.0 7.00 55.00 62.00 NOTE
r-oldrel-windows-ix86+x86_64 0.3.0 20.00 48.00 68.00 OK

Check Details

Version: 0.3.0
Check: R code for possible problems
Result: NOTE
    .plot.nbp.test: no visible global function definition for ‘boxplot’
    compute.tail.prob: no visible global function definition for ‘dnbinom’
    disp.nbq: no visible global function definition for ‘median’
    disp.nbs: no visible global function definition for ‘quantile’
    disp.step: no visible global function definition for ‘quantile’
    estimate.norm.factors.AH2010 : <anonymous>: no visible global function
     definition for ‘median’
    example.smart.plot: no visible global function definition for ‘rnorm’
    example.smart.plot: no visible global function definition for ‘par’
    example.smart.plot: no visible global function definition for ‘plot’
    example.smart.plot: no visible global function definition for ‘rgb’
    hoa.1d: no visible global function definition for ‘pnorm’
    hoa.hd: no visible global function definition for ‘pchisq’
    irls.nb: no visible global function definition for ‘txtProgressBar’
    irls.nb: no visible global function definition for ‘setTxtProgressBar’
    ll.nb: no visible global function definition for ‘dnbinom’
    ma.plot: no visible global function definition for ‘abline’
    ma.plot: no visible global function definition for ‘points’
    mv.line: no visible global function definition for ‘lines’
    mv.plot: no visible binding for global variable ‘var’
    mv.points: no visible binding for global variable ‘var’
    mv.points: no visible global function definition for ‘points’
    optim.disp.apl: no visible global function definition for ‘optim’
    optim.disp.pl: no visible global function definition for ‘optim’
    optim.pcl: no visible global function definition for ‘optim’
    phi.line: no visible global function definition for ‘lines’
    phi.plot: no visible binding for global variable ‘var’
    plot.nb.data: no visible global function definition for ‘boxplot’
    plot.nb.data: no visible global function definition for ‘hist’
    plot.nb.data : panel.hist: no visible global function definition for
     ‘par’
    plot.nb.data : panel.hist: no visible global function definition for
     ‘hist’
    plot.nb.data : panel.hist: no visible global function definition for
     ‘rect’
    plot.nb.data: no visible global function definition for ‘pairs’
    plot.nb.data : <anonymous>: no visible global function definition for
     ‘abline’
    plot.nb.dispersion: no visible global function definition for ‘plot’
    plot.nbp: no visible global function definition for ‘boxplot’
    plot.nbp: no visible global function definition for ‘par’
    print.nb.data: no visible global function definition for ‘str’
    print.nb.data: no visible global function definition for ‘head’
    print.nb.dispersion: no visible global function definition for ‘str’
    print.nb.dispersion: no visible global function definition for ‘head’
    print.nb.test: no visible global function definition for ‘str’
    smart.plot: no visible global function definition for ‘xy.coords’
    smart.plot: no visible global function definition for ‘gray’
    smart.plot: no visible global function definition for ‘rgb’
    smart.points: no visible global function definition for ‘xy.coords’
    smart.points: no visible global function definition for ‘gray’
    smart.points: no visible global function definition for ‘rgb’
    smart.points: no visible global function definition for ‘points’
    test.coefficient: no visible global function definition for
     ‘txtProgressBar’
    test.coefficient: no visible global function definition for
     ‘setTxtProgressBar’
    test.compute.tail.prob: no visible global function definition for
     ‘rnbinom’
    test.compute.tail.prob: no visible global function definition for
     ‘plot’
    test.compute.tail.prob: no visible global function definition for
     ‘hist’
    thin.counts: no visible global function definition for ‘rbinom’
    Undefined global functions or variables:
     abline boxplot dnbinom gray head hist lines median optim pairs par
     pchisq plot pnorm points quantile rbinom rect rgb rnbinom rnorm
     setTxtProgressBar str txtProgressBar var xy.coords
    Consider adding
     importFrom("grDevices", "gray", "rgb", "xy.coords")
     importFrom("graphics", "abline", "boxplot", "hist", "lines", "pairs",
     "par", "plot", "points", "rect")
     importFrom("stats", "dnbinom", "median", "optim", "pchisq", "pnorm",
     "quantile", "rbinom", "rnbinom", "rnorm", "var")
     importFrom("utils", "head", "setTxtProgressBar", "str",
     "txtProgressBar")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64