CRAN Package Check Results for Package SVMMaj

Last updated on 2016-10-24 23:48:36.

Check Details

Version: 0.2-2
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: ‘kernlab’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 0.2-2
Check: R code for possible problems
Result: NOTE
    roccurve: warning in formatC(sum(c1 * cumsum(c2)), digit = 4): partial
     argument match of ‘digit’ to ‘digits’
    svmmajtuning: warning in .svmmaj(Z[groups != i, ], y[groups != i],
     lambda = lambda[l], w = w[groups != i], increase.step =
     increase.step, hinge = newHinge, theta = theta, check.positive =
     FALSE, convergence = convergence, ...): partial argument match of
     ‘hinge’ to ‘hingef’
    .svmmaj: no visible global function definition for ‘update’
    auc: no visible global function definition for ‘error’
    getUpdate: no visible global function definition for ‘vanilladot’
    getUpdate: no visible global function definition for ‘kernelMatrix’
    isb: no visible global function definition for ‘quantile’
    normalize: no visible global function definition for ‘sd’
    plot.hinge: no visible global function definition for ‘plot’
    plot.hinge: no visible global function definition for ‘lines’
    plot.hinge: no visible global function definition for ‘points’
    plot.svmmaj: no visible global function definition for ‘density’
    plot.svmmaj: no visible global function definition for ‘bw.nrd0’
    plot.svmmaj: no visible global function definition for ‘plot’
    plot.svmmaj: no visible global function definition for ‘title’
    plot.svmmaj: no visible global function definition for ‘lines’
    plot.svmmaj: no visible global function definition for ‘par’
    plot.svmmaj: no visible global function definition for ‘legend’
    plotWeights: no visible global function definition for ‘layout’
    plotWeights: no visible global function definition for ‘par’
    plotWeights: no visible global function definition for ‘barplot’
    plotWeights: no visible global function definition for ‘plot’
    plotWeights: no visible global function definition for ‘title’
    plotWeights: no visible global function definition for ‘lines’
    plotWeights: no visible global function definition for ‘legend’
    predict.svmmaj: no visible global function definition for ‘plot’
    predict.svmmaj: no visible global function definition for ‘density’
    predict.transDat: no visible global function definition for
     ‘model.matrix’
    qhat.theta: no visible global function definition for ‘kernelMatrix’
    roccurve: no visible global function definition for ‘error’
    roccurve: no visible global function definition for ‘plot’
    roccurve: no visible global function definition for ‘lines’
    svmmaj.default: no visible binding for global variable ‘vanilladot’
    svmmaj.default: no visible binding for global variable ‘na.omit’
    svmmaj.default: no visible global function definition for ‘kpar’
    svmmaj.default: no visible global function definition for ‘update’
    svmmaj2.default: no visible binding for global variable ‘vanilladot’
    svmmaj2.default: no visible binding for global variable ‘na.omit’
    svmmaj2.default: no visible global function definition for ‘kpar’
    svmmajcrossval : <anonymous>: no visible global function definition for
     ‘update’
    svmmajtuning: no visible binding for global variable ‘vanilladot’
    svmmajtuning: no visible binding for global variable ‘na.omit’
    transformdata: no visible global function definition for ‘model.matrix’
    Undefined global functions or variables:
     barplot bw.nrd0 density error kernelMatrix kpar layout legend lines
     model.matrix na.omit par plot points quantile sd title update
     vanilladot
    Consider adding
     importFrom("graphics", "barplot", "layout", "legend", "lines", "par",
     "plot", "points", "title")
     importFrom("stats", "bw.nrd0", "density", "model.matrix", "na.omit",
     "quantile", "sd", "update")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 0.2-2
Check: Rd line widths
Result: NOTE
    Rd file 'svmmajcrossval.Rd':
     \usage lines wider than 90 characters:
     svmmajcrossval(X,y,search.grid=list(lambda=2^seq(5,-5,length.out=19)),...,convergence=1e-4,
     weights.obs=1, check.positive = TRUE, print.progress=FALSE, ngroup = 5, groups = NULL)
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.2-2
Check: dependencies in R code
Result: NOTE
    Namespaces in Imports field not imported from:
     ‘MASS’ ‘graphics’ ‘methods’ ‘stats’
     All declared Imports should be used.
    Package in Depends field not imported from: ‘kernlab’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-osx-x86_64-mavericks, r-oldrel-windows-ix86+x86_64

Version: 0.2-2
Check: R code for possible problems
Result: NOTE
    roccurve: warning in formatC(sum(c1 * cumsum(c2)), digit = 4): partial
     argument match of 'digit' to 'digits'
    svmmajtuning: warning in .svmmaj(Z[groups != i, ], y[groups != i],
     lambda = lambda[l], w = w[groups != i], increase.step =
     increase.step, hinge = newHinge, theta = theta, check.positive =
     FALSE, convergence = convergence, ...): partial argument match of
     'hinge' to 'hingef'
    auc: no visible global function definition for 'error'
    getUpdate: no visible global function definition for 'vanilladot'
    getUpdate: no visible global function definition for 'kernelMatrix'
    qhat.theta: no visible global function definition for 'kernelMatrix'
    roccurve: no visible global function definition for 'error'
    svmmaj.default: no visible binding for global variable 'vanilladot'
    svmmaj.default: no visible global function definition for 'kpar'
    svmmaj2.default: no visible binding for global variable 'vanilladot'
    svmmaj2.default: no visible global function definition for 'kpar'
    svmmajtuning: no visible binding for global variable 'vanilladot'
Flavor: r-oldrel-windows-ix86+x86_64