Last updated on 2016-10-24 23:48:27.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.2.1 | 8.57 | 123.35 | 131.92 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.2.1 | 8.61 | 121.81 | 130.42 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.2.1 | 282.85 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.2.1 | 266.71 | ERROR | |||
| r-devel-macos-x86_64-clang | 2.2.1 | 212.64 | OK | |||
| r-devel-windows-ix86+x86_64 | 2.2.1 | 33.00 | 342.00 | 375.00 | OK | |
| r-patched-linux-x86_64 | 2.2.1 | 9.33 | 120.90 | 130.24 | OK | |
| r-patched-solaris-sparc | 2.2.1 | 1328.10 | ERROR | |||
| r-patched-solaris-x86 | 2.2.1 | 326.70 | OK | |||
| r-release-linux-x86_64 | 2.2.1 | 8.18 | 122.63 | 130.81 | OK | |
| r-release-osx-x86_64-mavericks | 2.2.1 | OK | ||||
| r-release-windows-ix86+x86_64 | 2.2.1 | 37.00 | 341.00 | 378.00 | OK | |
| r-oldrel-windows-ix86+x86_64 | 2.2.1 | 48.00 | 364.00 | 412.00 | OK |
Memtest notes: valgrind
Version: 2.2.1
Check: tests
Result: ERROR
Running the tests in ‘tests/test-all.R’ failed.
Last 13 lines of output:
This is poppr version 2.2.1. To get started, type package?poppr
OMP parallel support: available
Error in if (maxx > 1) x <- x/maxx :
missing value where TRUE/FALSE needed
Calls: test_check ... update_edge_scales -> gray -> adjustcurve -> rerange
In addition: Warning messages:
1: In mlg.filter.internal(pop, threshold, missing, memory, algorithm, :
The data resulted in a negative or invalid distance or cluster id. Result vector is incomplete.
2: In min(x, na.rm = TRUE) :
no non-missing arguments to min; returning Inf
3: In max(x, na.rm = TRUE) :
no non-missing arguments to max; returning -Inf
testthat results ================================================================
OK: 132 SKIPPED: 47 FAILED: 0
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 2.2.1
Check: examples
Result: ERROR
Running examples in ‘poppr-Ex.R’ failed
The error most likely occurred in:
> ### Name: bitwise.dist
> ### Title: Calculate a dissimilarity distance matrix for SNP data.
> ### Aliases: bitwise.dist
>
> ### ** Examples
>
> set.seed(999)
> x <- glSim(n.ind = 10, n.snp.nonstruc = 5e2, n.snp.struc = 5e2, ploidy = 2)
*** caught segfault ***
address 7400000, cause 'memory not mapped'
Flavor: r-patched-solaris-sparc
Version: 2.2.1
Check: tests
Result: ERROR
Running the tests in ‘tests/test-all.R’ failed.
Last 13 lines of output:
/// adegenet 2.0.1 is loaded ////////////
> overview: '?adegenet'
> tutorials/doc/questions: 'adegenetWeb()'
> bug reports/feature requests: adegenetIssues()
This is poppr version 2.2.1. To get started, type package?poppr
OMP parallel support: available
*** caught segfault ***
address 7000000, cause 'memory not mapped'
Flavor: r-patched-solaris-sparc