Implements Partition-Assisted Clustering, which utilizes a collection of partition based nonparametric density estimation techniques to improve the robustness and accuracy of downstream clustering. The package also provides functions for effectively visualizing the clustering results. It is particularly useful for finding and visualizing subpopulations in single-cell data analysis.
| Version: | 1.0.5 |
| Imports: | Rcpp (≥ 0.12.2), NMF, RJSONIO, data.table, dplyr |
| LinkingTo: | Rcpp |
| Suggests: | knitr |
| Published: | 2016-04-10 |
| Author: | Dangna Li, Henry Li |
| Maintainer: | Dangna Li <ldangna at gmail.com> |
| License: | GPL-3 |
| NeedsCompilation: | yes |
| SystemRequirements: | C++11 |
| CRAN checks: | PAC results |
| Reference manual: | PAC.pdf |
| Vignettes: |
Using the PAC package |
| Package source: | PAC_1.0.5.tar.gz |
| Windows binaries: | r-devel: PAC_1.0.5.zip, r-release: PAC_1.0.5.zip, r-oldrel: PAC_1.0.5.zip |
| OS X Mavericks binaries: | r-release: PAC_1.0.5.tgz, r-oldrel: PAC_1.0.5.tgz |
| Old sources: | PAC archive |
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