SimReg: Similarity Regression

Functions for performing Bayesian similarity regression, and evaluating the probability of association between sets of ontological terms and binary response vector. A random model is compared with one in which the log odds of a true response is linked to the semantic similarity between terms and a latent characteristic ontological profile.

Version: 3.0
Depends: R (≥ 3.0.0)
Imports: Rcpp (≥ 0.11.1), ontologyIndex (≥ 2.0), ontologySimilarity (≥ 2.0), ontologyPlot
LinkingTo: Rcpp
Suggests: knitr
Published: 2016-10-15
Author: Daniel Greene
Maintainer: Daniel Greene <dg333 at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
CRAN checks: SimReg results


Reference manual: SimReg.pdf
Vignettes: Similarity Regression - Introduction
Prior phenotypic information
Package source: SimReg_3.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X Mavericks binaries: r-release: SimReg_3.0.tgz, r-oldrel: SimReg_3.0.tgz
Old sources: SimReg archive


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