The functions in this package remove batch effects from microarrary normalized data. The expression levels of the genes are represented in a matrix where rows correspond to independent samples and columns to genes (variables). The batches are represented by categorical variables (objects of class factor). When further covariates of interest are available they can be used to remove efficiently the batch effects and adjust the data.
| Version: | 4.0 |
| Depends: | MASS |
| Published: | 2013-03-12 |
| Author: | Marco Giordan |
| Maintainer: | Marco Giordan <marco.giordan at fmach.it> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| CRAN checks: | ber results |
| Reference manual: | ber.pdf |
| Package source: | ber_4.0.tar.gz |
| Windows binaries: | r-devel: ber_4.0.zip, r-release: ber_4.0.zip, r-oldrel: ber_4.0.zip |
| OS X Mavericks binaries: | r-release: ber_4.0.tgz, r-oldrel: ber_4.0.tgz |
| Old sources: | ber archive |
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