phylo_path()
has become more streamlined with functionality moved to other functions. The phylopath
object now containts all necessary models and data, summary()
is used to obtain the results table, and best()
and average()
are used to extract and fit the best or average model. See the vignette for details.
Model averaging for arbitrary models is now possible with average_DAGs()
.
Model averaging now supports both conditional and full model averaging.
Both the old est_DAG()
and the new average_DAGs()
now return objects of a new class fitted_DAG
, that has it's seperate plot
method. The plot
method for objects of class DAG
has been simplified.
Model averaging now returns standard errors and confidence intervals based on the MuMIn
package (issue #1).
A new function plot_coefs
for plotting regression coefficients and their confidence intervals has been added.