CRAN Package Check Results for Package WhopGenome

Last updated on 2016-10-25 23:47:58.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.9.4 11.11 17.23 28.34 ERROR
r-devel-linux-x86_64-debian-gcc 0.9.4 11.87 16.62 28.49 ERROR
r-devel-linux-x86_64-fedora-clang 0.9.4 57.11 ERROR
r-devel-linux-x86_64-fedora-gcc 0.9.4 49.03 ERROR
r-devel-windows-ix86+x86_64 0.9.4 174.00 53.00 227.00 ERROR
r-patched-linux-x86_64 0.9.4 10.71 15.93 26.64 OK
r-patched-solaris-sparc 0.9.4 255.70 NOTE
r-patched-solaris-x86 0.9.4 57.60 NOTE
r-release-linux-x86_64 0.9.4 10.84 16.01 26.85 OK
r-release-osx-x86_64-mavericks 0.9.4 OK
r-release-windows-ix86+x86_64 0.9.4 112.00 56.00 168.00 OK
r-oldrel-windows-ix86+x86_64 0.9.4 137.00 47.00 184.00 OK

Check Details

Version: 0.9.4
Check: examples
Result: ERROR
    Running examples in ‘WhopGenome-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: fai_close
    > ### Title: Closes a file previously opened with fai_open
    > ### Aliases: fai_close
    >
    > ### ** Examples
    >
    >
    > ##
    > ## Example :
    > ##
    > faifile <- system.file("extdata", "ex.fasta", package = "WhopGenome")
    > faifh <- fai_open( faifile )
    > stopifnot( faifh != NULL )
    Error in faifh != NULL :
     comparison (2) is possible only for atomic and list types
    Calls: stopifnot
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.9.4
Check: examples
Result: ERROR
    Running examples in ‘WhopGenome-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: fai_close
    > ### Title: Closes a file previously opened with fai_open
    > ### Aliases: fai_close
    >
    > ### ** Examples
    >
    >
    > ##
    > ## Example :
    > ##
    > faifile <- system.file("extdata", "ex.fasta", package = "WhopGenome")
    > faifh <- fai_open( faifile )
    > stopifnot( faifh != NULL )
    Error in faifh != NULL :
     comparison (2) is possible only for atomic and list types
    Calls: stopifnot
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang

Version: 0.9.4
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     tabix/knetfile.c:438:5: warning: ISO C does not support the 'I64' ms_printf length modifier [-Wformat=]
Flavor: r-devel-windows-ix86+x86_64

Version: 0.9.4
Check: running examples for arch ‘i386’
Result: ERROR
    Running examples in 'WhopGenome-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: fai_close
    > ### Title: Closes a file previously opened with fai_open
    > ### Aliases: fai_close
    >
    > ### ** Examples
    >
    >
    > ##
    > ## Example :
    > ##
    > faifile <- system.file("extdata", "ex.fasta", package = "WhopGenome")
    > faifh <- fai_open( faifile )
    > stopifnot( faifh != NULL )
    Error in faifh != NULL :
     comparison (2) is possible only for atomic and list types
    Calls: stopifnot
    Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 0.9.4
Check: running examples for arch ‘x64’
Result: ERROR
    Running examples in 'WhopGenome-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: fai_close
    > ### Title: Closes a file previously opened with fai_open
    > ### Aliases: fai_close
    >
    > ### ** Examples
    >
    >
    > ##
    > ## Example :
    > ##
    > faifile <- system.file("extdata", "ex.fasta", package = "WhopGenome")
    > faifh <- fai_open( faifile )
    > stopifnot( faifh != NULL )
    Error in faifh != NULL :
     comparison (2) is possible only for atomic and list types
    Calls: stopifnot
    Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 0.9.4
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘RMySQL’
Flavors: r-patched-solaris-sparc, r-patched-solaris-x86