Identify differentially expressed genes in RNA-seq count data using quasi-Poisson or quasi-negative binomial models with 'QL', 'QLShrink' and 'QLSpline' methods (Lund, Nettleton, McCarthy, and Smyth, 2012).
| Version: | 1.0-8 |
| Depends: | R (≥ 3.1.2) |
| Imports: | edgeR, mgcv, pracma |
| Suggests: | BB, nleqslv |
| Published: | 2015-05-15 |
| Author: | Steve Lund [aut], Long Qu [aut, cre, ctb], Ian Marschner [aut] (The author of glm2::glm.fit2, which was modified slightly leading to glm.fit3 in this package.), R Core Team [aut] (The author of stats::glm.fit, which was modified slightly leading to glm.fit3 in this package.) |
| Maintainer: | Long Qu <long.qu at wright.edu> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | yes |
| CRAN checks: | QuasiSeq results |
| Reference manual: | QuasiSeq.pdf |
| Package source: | QuasiSeq_1.0-8.tar.gz |
| Windows binaries: | r-devel: QuasiSeq_1.0-8.zip, r-release: QuasiSeq_1.0-8.zip, r-oldrel: QuasiSeq_1.0-8.zip |
| OS X Mavericks binaries: | r-release: QuasiSeq_1.0-8.tgz, r-oldrel: QuasiSeq_1.0-8.tgz |
| Old sources: | QuasiSeq archive |
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