Last updated on 2016-12-28 23:47:15.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.0.8 | 2.88 | 39.76 | 42.64 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.0.8 | 2.85 | 39.88 | 42.73 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.0.8 | 88.70 | NOTE | --no-stop-on-test-error | ||
| r-devel-linux-x86_64-fedora-gcc | 0.0.8 | 89.37 | NOTE | --no-stop-on-test-error | ||
| r-devel-macos-x86_64-clang | 0.0.8 | 69.92 | NOTE | --no-stop-on-test-error | ||
| r-devel-windows-ix86+x86_64 | 0.0.8 | 10.00 | 123.00 | 133.00 | NOTE | |
| r-patched-linux-x86_64 | 0.0.8 | 2.87 | 36.24 | 39.11 | NOTE | |
| r-patched-solaris-sparc | 0.0.8 | 484.30 | NOTE | |||
| r-patched-solaris-x86 | 0.0.8 | 106.50 | NOTE | |||
| r-release-linux-x86_64 | 0.0.8 | 2.80 | 36.15 | 38.95 | NOTE | |
| r-release-osx-x86_64-mavericks | 0.0.8 | NOTE | ||||
| r-release-windows-ix86+x86_64 | 0.0.8 | 9.00 | 58.00 | 67.00 | WARN | |
| r-oldrel-windows-ix86+x86_64 | 0.0.8 | 8.00 | 91.00 | 99.00 | NOTE |
Version: 0.0.8
Check: dependencies in R code
Result: NOTE
Package in Depends field not imported from: ‘survival’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.0.8
Check: R code for possible problems
Result: NOTE
abf.normal : <anonymous>: no visible global function definition for
‘dnorm’
abf.t : <anonymous>: no visible global function definition for ‘dt’
abf.t : <anonymous>: no visible global function definition for ‘dnorm’
chi2ncp: no visible global function definition for ‘qchisq’
chi2ncp: no visible global function definition for ‘pchisq’
chi2ncp: no visible global function definition for ‘uniroot’
chi2ncp : <anonymous>: no visible global function definition for
‘pchisq’
coeff.extract: no visible global function definition for ‘coefficients’
contrasting.rainbow: no visible global function definition for
‘rainbow’
fitmix: no visible global function definition for ‘rexp’
fitmix: no visible global function definition for ‘sd’
fitmix.plot: no visible global function definition for ‘density’
fitmix.plot: no visible global function definition for ‘plot’
fitmix.plot: no visible global function definition for ‘rug’
fitmix.plot: no visible global function definition for ‘polygon’
fitmix.plot: no visible global function definition for ‘lines’
fitmix.plot: no visible global function definition for ‘dnorm’
fitmix.plot: no visible global function definition for ‘rainbow’
fitmix.plot : <anonymous>: no visible global function definition for
‘dnorm’
fitmix.plot: no visible global function definition for ‘legend’
fitmix.simulate: no visible global function definition for ‘rnorm’
fitmix1: no visible global function definition for ‘quantile’
fitmix1: no visible global function definition for ‘sd’
fitmix1 : <anonymous>: no visible global function definition for
‘dnorm’
gls.approx.logistic: no visible global function definition for
‘as.formula’
gls.approx.logistic: no visible global function definition for
‘predict’
gls.approx.logistic: no visible global function definition for ‘glm’
gls.approx.logistic: no visible binding for global variable
‘na.exclude’
grs.filter.Qrs: no visible global function definition for ‘pchisq’
grs.onesnp.apply: no visible global function definition for ‘update’
grs.onesnp.apply: no visible global function definition for
‘update.formula’
grs.onesnp.apply: no visible global function definition for ‘formula’
grs.plot: no visible global function definition for ‘plot’
grs.plot: no visible global function definition for ‘qnorm’
grs.plot: no visible global function definition for ‘abline’
grs.plot: no visible global function definition for ‘lines’
grs.plot: no visible global function definition for ‘points’
grs.summary: no visible global function definition for ‘pchisq’
hapmap.read.haplotypes: no visible global function definition for
‘read.table’
hapmap.snpdata: no visible global function definition for ‘na.omit’
multipheno.T2: no visible global function definition for ‘cor’
multipheno.T2: no visible global function definition for ‘pchisq’
read.snpdata.impute: no visible global function definition for
‘read.table’
read.snpdata.mach: no visible global function definition for
‘read.table’
read.snpdata.plink: no visible global function definition for
‘read.table’
run.blat: no visible global function definition for ‘read.table’
stepdown.moments2: no visible global function definition for ‘qchisq’
stepdown.moments2: no visible global function definition for ‘pchisq’
stepup.moments2: no visible global function definition for ‘qchisq’
stepup.moments2: no visible global function definition for ‘pchisq’
test.subsample: no visible global function definition for ‘update’
test.subsample: no visible global function definition for
‘update.formula’
test.subsample: no visible global function definition for ‘formula’
test.subsample: no visible global function definition for ‘binom.test’
Undefined global functions or variables:
abline as.formula binom.test coefficients cor density dnorm dt
formula glm legend lines na.exclude na.omit pchisq plot points
polygon predict qchisq qnorm quantile rainbow read.table rexp rnorm
rug sd uniroot update update.formula
Consider adding
importFrom("grDevices", "rainbow")
importFrom("graphics", "abline", "legend", "lines", "plot", "points",
"polygon", "rug")
importFrom("stats", "as.formula", "binom.test", "coefficients", "cor",
"density", "dnorm", "dt", "formula", "glm", "na.exclude",
"na.omit", "pchisq", "predict", "qchisq", "qnorm",
"quantile", "rexp", "rnorm", "sd", "uniroot", "update",
"update.formula")
importFrom("utils", "read.table")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64
Version: 0.0.8
Flags: --no-stop-on-test-error
Check: dependencies in R code
Result: NOTE
Package in Depends field not imported from: ‘survival’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang
Version: 0.0.8
Flags: --no-stop-on-test-error
Check: R code for possible problems
Result: NOTE
abf.normal : <anonymous>: no visible global function definition for
‘dnorm’
abf.t : <anonymous>: no visible global function definition for ‘dt’
abf.t : <anonymous>: no visible global function definition for ‘dnorm’
chi2ncp: no visible global function definition for ‘qchisq’
chi2ncp: no visible global function definition for ‘pchisq’
chi2ncp: no visible global function definition for ‘uniroot’
chi2ncp : <anonymous>: no visible global function definition for
‘pchisq’
coeff.extract: no visible global function definition for ‘coefficients’
contrasting.rainbow: no visible global function definition for
‘rainbow’
fitmix: no visible global function definition for ‘rexp’
fitmix: no visible global function definition for ‘sd’
fitmix.plot: no visible global function definition for ‘density’
fitmix.plot: no visible global function definition for ‘plot’
fitmix.plot: no visible global function definition for ‘rug’
fitmix.plot: no visible global function definition for ‘polygon’
fitmix.plot: no visible global function definition for ‘lines’
fitmix.plot: no visible global function definition for ‘dnorm’
fitmix.plot: no visible global function definition for ‘rainbow’
fitmix.plot : <anonymous>: no visible global function definition for
‘dnorm’
fitmix.plot: no visible global function definition for ‘legend’
fitmix.simulate: no visible global function definition for ‘rnorm’
fitmix1: no visible global function definition for ‘quantile’
fitmix1: no visible global function definition for ‘sd’
fitmix1 : <anonymous>: no visible global function definition for
‘dnorm’
gls.approx.logistic: no visible global function definition for
‘as.formula’
gls.approx.logistic: no visible global function definition for
‘predict’
gls.approx.logistic: no visible global function definition for ‘glm’
gls.approx.logistic: no visible binding for global variable
‘na.exclude’
grs.filter.Qrs: no visible global function definition for ‘pchisq’
grs.onesnp.apply: no visible global function definition for ‘update’
grs.onesnp.apply: no visible global function definition for
‘update.formula’
grs.onesnp.apply: no visible global function definition for ‘formula’
grs.plot: no visible global function definition for ‘plot’
grs.plot: no visible global function definition for ‘qnorm’
grs.plot: no visible global function definition for ‘abline’
grs.plot: no visible global function definition for ‘lines’
grs.plot: no visible global function definition for ‘points’
grs.summary: no visible global function definition for ‘pchisq’
hapmap.read.haplotypes: no visible global function definition for
‘read.table’
hapmap.snpdata: no visible global function definition for ‘na.omit’
multipheno.T2: no visible global function definition for ‘cor’
multipheno.T2: no visible global function definition for ‘pchisq’
read.snpdata.impute: no visible global function definition for
‘read.table’
read.snpdata.mach: no visible global function definition for
‘read.table’
read.snpdata.plink: no visible global function definition for
‘read.table’
run.blat: no visible global function definition for ‘read.table’
stepdown.moments2: no visible global function definition for ‘qchisq’
stepdown.moments2: no visible global function definition for ‘pchisq’
stepup.moments2: no visible global function definition for ‘qchisq’
stepup.moments2: no visible global function definition for ‘pchisq’
test.subsample: no visible global function definition for ‘update’
test.subsample: no visible global function definition for
‘update.formula’
test.subsample: no visible global function definition for ‘formula’
test.subsample: no visible global function definition for ‘binom.test’
Undefined global functions or variables:
abline as.formula binom.test coefficients cor density dnorm dt
formula glm legend lines na.exclude na.omit pchisq plot points
polygon predict qchisq qnorm quantile rainbow read.table rexp rnorm
rug sd uniroot update update.formula
Consider adding
importFrom("grDevices", "rainbow")
importFrom("graphics", "abline", "legend", "lines", "plot", "points",
"polygon", "rug")
importFrom("stats", "as.formula", "binom.test", "coefficients", "cor",
"density", "dnorm", "dt", "formula", "glm", "na.exclude",
"na.omit", "pchisq", "predict", "qchisq", "qnorm",
"quantile", "rexp", "rnorm", "sd", "uniroot", "update",
"update.formula")
importFrom("utils", "read.table")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang
Version: 0.0.8
Check: re-building of vignette outputs
Result: WARN
Error in re-building vignettes:
...
Loading required package: survival
Warning: running command '"D:\compiler\texmf\miktex\bin\texify.exe" --quiet --pdf "ashg2012.tex" --max-iterations=20 -I "D:/RCompile/recent/R-3.3.2/share/texmf/tex/latex" -I "D:/RCompile/recent/R-3.3.2/share/texmf/bibtex/bst"' had status 1
Error: running 'texi2dvi' on 'ashg2012.tex' failed
LaTeX errors:
! LaTeX Error: File `D:/RCompile/recent/R-33\unhbox\voidb@x \penalty \@M \ {}1.
2/share/texmf/tex/latex/Sweave.sty' not found.
Type X to quit or <RETURN> to proceed,
or enter new name. (Default extension: sty)
Execution halted
Flavor: r-release-windows-ix86+x86_64
Version: 0.0.8
Check: re-building of vignette outputs
Result: NOTE
Error in re-building vignettes:
...
Loading required package: survival
Warning: running command '"D:\compiler\texmf\miktex\bin\texify.exe" --quiet --pdf "ashg2012.tex" --max-iterations=20 -I "D:/RCompile/recent/R-3.2.5/share/texmf/tex/latex" -I "D:/RCompile/recent/R-3.2.5/share/texmf/bibtex/bst"' had status 1
Error: running 'texi2dvi' on 'ashg2012.tex' failed
LaTeX errors:
! LaTeX Error: File `D:/RCompile/recent/R-32\unhbox\voidb@x \penalty \@M \ {}1.
5/share/texmf/tex/latex/Sweave.sty' not found.
Type X to quit or <RETURN> to proceed,
or enter new name. (Default extension: sty)
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64