Last updated on 2016-12-28 23:47:28.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.2-6 | 1.38 | 43.09 | 44.47 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 2.2-6 | 1.19 | 40.66 | 41.85 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 2.2-6 | 80.77 | NOTE | --no-stop-on-test-error | ||
| r-devel-linux-x86_64-fedora-gcc | 2.2-6 | 79.56 | NOTE | --no-stop-on-test-error | ||
| r-devel-macos-x86_64-clang | 2.2-6 | 62.95 | NOTE | --no-stop-on-test-error | ||
| r-devel-windows-ix86+x86_64 | 2.2-6 | 8.00 | 76.00 | 84.00 | NOTE | |
| r-patched-linux-x86_64 | 2.2-6 | 1.16 | 38.14 | 39.30 | NOTE | |
| r-patched-solaris-sparc | 2.2-6 | 513.80 | NOTE | |||
| r-patched-solaris-x86 | 2.2-6 | 92.30 | NOTE | |||
| r-release-linux-x86_64 | 2.2-6 | 1.16 | 38.51 | 39.67 | NOTE | |
| r-release-osx-x86_64-mavericks | 2.2-6 | NOTE | ||||
| r-release-windows-ix86+x86_64 | 2.2-6 | 7.00 | 68.00 | 75.00 | NOTE | |
| r-oldrel-windows-ix86+x86_64 | 2.2-6 | 5.00 | 67.00 | 72.00 | OK |
Version: 2.2-6
Check: S3 generic/method consistency
Result: NOTE
Found the following apparent S3 methods exported but not registered:
print.alleleobject print.comprabclust print.nnclean print.prab
print.prabclust print.summary.prabtest summary.prabtest
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64
Version: 2.2-6
Check: R code for possible problems
Result: NOTE
NNclean: no visible global function definition for ‘dist’
NNclean: no visible global function definition for ‘hist’
NNclean: no visible global function definition for ‘box’
NNclean: no visible global function definition for ‘lines’
abundtest: no visible global function definition for ‘as.dist’
alleleconvert: no visible global function definition for ‘read.table’
alleleconvert: no visible global function definition for ‘write.table’
alleleinit: no visible global function definition for ‘read.table’
autoreg: no visible global function definition for ‘lm’
autoreg: no visible global function definition for ‘abline’
cluspop.nb: no visible global function definition for ‘runif’
comp.test: no visible global function definition for ‘chisq.test’
coord2dist: no visible global function definition for ‘read.table’
coord2dist: no visible global function definition for ‘as.dist’
geco: no visible global function definition for ‘as.dist’
homogen.test: no visible global function definition for ‘ppois’
homogen.test: no visible global function definition for ‘pnorm’
hprabclust: no visible global function definition for ‘cmdscale’
hprabclust: no visible global function definition for ‘as.dist’
hprabclust: no visible global function definition for ‘hclust’
hprabclust: no visible global function definition for ‘cutree’
hprabclust: no visible global function definition for ‘plot’
lociplots: no visible global function definition for ‘plot’
lociplots: no visible global function definition for ‘grey’
prab.sarestimate: no visible global function definition for ‘coef’
prab.sarestimate: no visible global function definition for ‘lm’
prabclust: no visible global function definition for ‘cmdscale’
prabclust: no visible global function definition for ‘plot’
prabinit: no visible global function definition for ‘read.table’
prabinit: no visible global function definition for ‘median’
prabinit: no visible global function definition for ‘mad’
randpop.nb: no visible global function definition for ‘runif’
regpop.sar: no visible global function definition for ‘runif’
regpop.sar: no visible global function definition for ‘rnorm’
Undefined global functions or variables:
abline as.dist box chisq.test cmdscale coef cutree dist grey hclust
hist lines lm mad median plot pnorm ppois read.table rnorm runif
write.table
Consider adding
importFrom("grDevices", "grey")
importFrom("graphics", "abline", "box", "hist", "lines", "plot")
importFrom("stats", "as.dist", "chisq.test", "cmdscale", "coef",
"cutree", "dist", "hclust", "lm", "mad", "median", "pnorm",
"ppois", "rnorm", "runif")
importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64
Version: 2.2-6
Flags: --no-stop-on-test-error
Check: S3 generic/method consistency
Result: NOTE
Found the following apparent S3 methods exported but not registered:
print.alleleobject print.comprabclust print.nnclean print.prab
print.prabclust print.summary.prabtest summary.prabtest
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang
Version: 2.2-6
Flags: --no-stop-on-test-error
Check: R code for possible problems
Result: NOTE
NNclean: no visible global function definition for ‘dist’
NNclean: no visible global function definition for ‘hist’
NNclean: no visible global function definition for ‘box’
NNclean: no visible global function definition for ‘lines’
abundtest: no visible global function definition for ‘as.dist’
alleleconvert: no visible global function definition for ‘read.table’
alleleconvert: no visible global function definition for ‘write.table’
alleleinit: no visible global function definition for ‘read.table’
autoreg: no visible global function definition for ‘lm’
autoreg: no visible global function definition for ‘abline’
cluspop.nb: no visible global function definition for ‘runif’
comp.test: no visible global function definition for ‘chisq.test’
coord2dist: no visible global function definition for ‘read.table’
coord2dist: no visible global function definition for ‘as.dist’
geco: no visible global function definition for ‘as.dist’
homogen.test: no visible global function definition for ‘ppois’
homogen.test: no visible global function definition for ‘pnorm’
hprabclust: no visible global function definition for ‘cmdscale’
hprabclust: no visible global function definition for ‘as.dist’
hprabclust: no visible global function definition for ‘hclust’
hprabclust: no visible global function definition for ‘cutree’
hprabclust: no visible global function definition for ‘plot’
lociplots: no visible global function definition for ‘plot’
lociplots: no visible global function definition for ‘grey’
prab.sarestimate: no visible global function definition for ‘coef’
prab.sarestimate: no visible global function definition for ‘lm’
prabclust: no visible global function definition for ‘cmdscale’
prabclust: no visible global function definition for ‘plot’
prabinit: no visible global function definition for ‘read.table’
prabinit: no visible global function definition for ‘median’
prabinit: no visible global function definition for ‘mad’
randpop.nb: no visible global function definition for ‘runif’
regpop.sar: no visible global function definition for ‘runif’
regpop.sar: no visible global function definition for ‘rnorm’
Undefined global functions or variables:
abline as.dist box chisq.test cmdscale coef cutree dist grey hclust
hist lines lm mad median plot pnorm ppois read.table rnorm runif
write.table
Consider adding
importFrom("grDevices", "grey")
importFrom("graphics", "abline", "box", "hist", "lines", "plot")
importFrom("stats", "as.dist", "chisq.test", "cmdscale", "coef",
"cutree", "dist", "hclust", "lm", "mad", "median", "pnorm",
"ppois", "rnorm", "runif")
importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang