AmyloGram: Prediction of Amyloid Proteins

Predicts amyloid proteins using random forests trained on the n-gram encoded peptides. The implemented algorithm can be accessed from both the command line and shiny-based GUI.

Version: 1.0
Depends: R (≥ 3.0.0)
Imports: biogram, ranger, seqinr, shiny
Suggests: DT, ggplot2, knitr, markdown, rmarkdown
Published: 2016-09-24
Author: Michal Burdukiewicz [cre, aut], Piotr Sobczyk [ctb], Stefan Roediger [ctb]
Maintainer: Michal Burdukiewicz <michalburdukiewicz at>
License: GPL-3
NeedsCompilation: no
Citation: AmyloGram citation info
Materials: README
CRAN checks: AmyloGram results


Reference manual: AmyloGram.pdf
Package source: AmyloGram_1.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X Mavericks binaries: r-release: AmyloGram_1.0.tgz, r-oldrel: AmyloGram_1.0.tgz


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