Provides automatization for plot generation succeeding common molecular dynamics analyses. This includes straightforward plots, such as RMSD (Root-Mean-Square-Deviation) and RMSF (Root-Mean-Square-Fluctuation) but also more sophisticated ones such as dihedral angle maps, hydrogen bonds, cluster bar plots and DSSP (Definition of Secondary Structure of Proteins) analysis.
Version: | 0.3.1 |
Depends: | R (≥ 3.0.0), methods, MASS, RColorBrewer, gplots, gtools |
Published: | 2016-04-28 |
Author: | Christian Margreitter [aut, cre] |
Maintainer: | Christian Margreitter <christian.margreitter at gmail.com> |
License: | GPL-3 |
URL: | https://github.com/MDplot/MDplot |
NeedsCompilation: | no |
Citation: | MDplot citation info |
Materials: | NEWS |
CRAN checks: | MDplot results |
Reference manual: | MDplot.pdf |
Package source: | MDplot_0.3.1.tar.gz |
Windows binaries: | r-devel: MDplot_0.3.1.zip, r-release: MDplot_0.3.1.zip, r-oldrel: MDplot_0.3.1.zip |
OS X Mavericks binaries: | r-release: MDplot_0.3.1.tgz, r-oldrel: MDplot_0.3.1.tgz |
Old sources: | MDplot archive |
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