This is a simple package that fits the logistic equation to microbial growth curve data (e.g., repeated absorbance measurements taken from a plate reader over time). From this fit, a variety of metrics are provided, including the maximum growth rate, the doubling time, the carrying capacity, the area under the logistic curve, and the time to the inflection point.
| Version: | 0.2.1 |
| Depends: | R (≥ 2.10) |
| Imports: | caTools (≥ 1.17.1), minpack.lm (≥ 1.1), stats (≥ 3.2.2), graphics (≥ 3.2.2), grDevices (≥ 3.2.2) |
| Suggests: | testthat, knitr, dplyr, ggplot2 |
| Published: | 2016-03-29 |
| Author: | Kathleen sprouffske [aut, cre] |
| Maintainer: | Kathleen sprouffske <sprouffske at gmail.com> |
| BugReports: | https://github.com/sprouffske/growthcurver/issues |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://github.com/sprouffske/growthcurver |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | growthcurver results |
| Reference manual: | growthcurver.pdf |
| Vignettes: |
Using growthcurver |
| Package source: | growthcurver_0.2.1.tar.gz |
| Windows binaries: | r-devel: growthcurver_0.2.1.zip, r-release: growthcurver_0.2.1.zip, r-oldrel: growthcurver_0.2.1.zip |
| OS X Mavericks binaries: | r-release: growthcurver_0.2.1.tgz, r-oldrel: growthcurver_0.2.1.tgz |
| Old sources: | growthcurver archive |
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