To facilitate retrieving and processing biochemical reaction data such as Rhea, MetaCyc, KEGG and Unipathway, the package provides the functions to download and parse data, instantiate generic reaction and check mass-balance. The package aims to construct an integrated metabolic network and genome-scale metabolic model.
| Version: | 1.5.1 |
| Depends: | R (≥ 3.0.3), fmcsR, ChemmineR |
| Imports: | plyr, RCurl, gdata, KEGGREST, data.table, stringr |
| Published: | 2015-05-19 |
| Author: | Byoungnam Min, Byeonghyeok Park, Kyoung Heon Kim and In-Geol Choi |
| Maintainer: | Byoungnam Min <mbnmbn00 at gmail.com> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | no |
| CRAN checks: | RbioRXN results |
| Reference manual: | RbioRXN.pdf |
| Package source: | RbioRXN_1.5.1.tar.gz |
| Windows binaries: | r-devel: RbioRXN_1.5.1.zip, r-release: RbioRXN_1.5.1.zip, r-oldrel: RbioRXN_1.5.1.zip |
| OS X Mavericks binaries: | r-release: RbioRXN_1.5.1.tgz, r-oldrel: not available |
| Old sources: | RbioRXN archive |
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