fcros: A Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations

A fold change rank based method is presented to search for differentially expressed genes and to detect recurrent chromosomal copy number aberrations. This method may be useful for high-throughput biological data (microarray, sequencing, ...). Probabilities are associated with genes/probes in the dataset and there is no problem of multiple tests when using this method. For aCGH data, segmentation results are obtained by merging the significant probes detected.

Version: 1.5.2
Depends: R (≥ 2.10)
Published: 2016-11-17
Author: Doulaye Dembele
Maintainer: Doulaye Dembele <doulaye at igbmc.fr>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
CRAN checks: fcros results


Reference manual: fcros.pdf
Package source: fcros_1.5.2.tar.gz
Windows binaries: r-devel: fcros_1.5.2.zip, r-release: fcros_1.5.2.zip, r-oldrel: fcros_1.5.zip
OS X Mavericks binaries: r-release: fcros_1.5.2.tgz, r-oldrel: fcros_1.5.tgz
Old sources: fcros archive


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