g2f: Find and Fill Gaps in Metabolic Networks

For a given metabolic network, this package finds the gaps (metabolites not produced or not consumed in any other reaction), and fills it from the stoichiometric reactions of a reference metabolic reconstruction using a weighting function. Also the option to download all the set of gene-associated stoichiometric reactions for a specific organism from the KEGG database <http://www.genome.jp/kegg/> is available.

Version: 0.1
Imports: KEGGREST, minval (≥ 0.5), sybil
Published: 2016-10-08
Author: Kelly Botero[aut,cre], Daniel Osorio[aut,cre], Janneth Gonzalez[aut], Andres Pinzon[aut].
Maintainer: Daniel Osorio <dcosorioh at unal.edu.co>
License: GPL-2
NeedsCompilation: no
Materials: README
CRAN checks: g2f results

Downloads:

Reference manual: g2f.pdf
Package source: g2f_0.1.tar.gz
Windows binaries: r-devel: g2f_0.1.zip, r-release: g2f_0.1.zip, r-oldrel: g2f_0.1.zip
OS X Mavericks binaries: r-release: g2f_0.1.tgz, r-oldrel: not available

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