Contains functionality for import and managing of downloaded genome annotation Data from Ensembl genome browser (European Bioinformatics Institute) and from UCSC genome browser (University of California, Santa Cruz) and annotation routines for genomic positions and splice site positions.
| Version: | 1.7.0 |
| Depends: | methods, doBy, RSQLite |
| Imports: | DBI |
| Published: | 2016-05-14 |
| Author: | Wolfgang Kaisers |
| Maintainer: | Wolfgang Kaisers <kaisers at med.uni-duesseldorf.de> |
| License: | GPL-2 |
| NeedsCompilation: | yes |
| Materials: | NEWS ChangeLog |
| CRAN checks: | refGenome results |
| Reference manual: | refGenome.pdf |
| Vignettes: |
Introduction Introduction |
| Package source: | refGenome_1.7.0.tar.gz |
| Windows binaries: | r-devel: refGenome_1.7.0.zip, r-release: refGenome_1.7.0.zip, r-oldrel: refGenome_1.7.0.zip |
| OS X Mavericks binaries: | r-release: refGenome_1.7.0.tgz, r-oldrel: refGenome_1.7.0.tgz |
| Old sources: | refGenome archive |
| Reverse depends: | rbamtools |
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