Last updated on 2017-07-26 01:56:23.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.6.2 | 2.85 | 41.70 | 44.55 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.3.6.2 | 2.89 | 42.25 | 45.14 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.3.6.2 | 70.19 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3.6.2 | 72.69 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 0.3.6.2 | 14.00 | 124.00 | 138.00 | NOTE | |
| r-patched-linux-x86_64 | 0.3.6.2 | 3.02 | 40.69 | 43.70 | NOTE | |
| r-patched-solaris-x86 | 0.3.6.2 | 83.20 | NOTE | |||
| r-release-linux-x86_64 | 0.3.6.2 | 2.94 | 40.15 | 43.09 | NOTE | |
| r-release-windows-ix86+x86_64 | 0.3.6.2 | 12.00 | 119.00 | 131.00 | NOTE | |
| r-release-osx-x86_64 | 0.3.6.2 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 0.3.6.2 | 12.00 | 76.00 | 88.00 | NOTE | |
| r-oldrel-osx-x86_64 | 0.3.6.2 | WARN |
Version: 0.3.6.2
Check: R code for possible problems
Result: NOTE
data.reduction: no visible global function definition for ‘prcomp’
data.reduction: no visible global function definition for ‘hclust’
data.reduction: no visible global function definition for ‘as.dist’
data.reduction: no visible global function definition for ‘cor’
data.reduction: no visible global function definition for ‘dist’
heatmap1: no visible global function definition for ‘sd’
lineplot: no visible global function definition for ‘sd’
normalize: no visible global function definition for ‘sd’
profileplot3d : ColorFunction: no visible global function definition
for ‘rgb’
profileplot3d : ColorFunction: no visible global function definition
for ‘colorRamp’
profileplot3d: no visible global function definition for ‘sd’
profileplot3d: no visible global function definition for ‘gray’
Undefined global functions or variables:
as.dist colorRamp cor dist gray hclust prcomp rgb sd
Consider adding
importFrom("grDevices", "colorRamp", "gray", "rgb")
importFrom("stats", "as.dist", "cor", "dist", "hclust", "prcomp", "sd")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.3.6.2
Check: compiled code
Result: NOTE
File ‘NeatMap/libs/NeatMap.so’:
Found ‘rand’, possibly from ‘rand’ (C)
Object: ‘nMDS_R.o’
Found ‘srand’, possibly from ‘srand’ (C)
Object: ‘nMDS_R.o’
File ‘NeatMap/libs/NeatMap.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.3.6.2
Check: compiled code
Result: NOTE
File 'NeatMap/libs/i386/NeatMap.dll':
Found 'rand', possibly from 'rand' (C)
Object: 'nMDS_R.o'
Found 'srand', possibly from 'srand' (C)
Object: 'nMDS_R.o'
File 'NeatMap/libs/x64/NeatMap.dll':
Found 'rand', possibly from 'rand' (C)
Object: 'nMDS_R.o'
Found 'srand', possibly from 'srand' (C)
Object: 'nMDS_R.o'
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.
See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.3.6.2
Check: compiled code
Result: NOTE
File ‘NeatMap/libs/NeatMap.so’:
Found ‘rand’, possibly from ‘rand’ (C)
Object: ‘nMDS_R.o’
Found ‘srand’, possibly from ‘srand’ (C)
Object: ‘nMDS_R.o’
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavor: r-patched-solaris-x86
Version: 0.3.6.2
Check: compiled code
Result: NOTE
File ‘NeatMap/libs/NeatMap.so’:
Found ‘_rand’, possibly from ‘rand’ (C)
Object: ‘nMDS_R.o’
Found ‘_srand’, possibly from ‘srand’ (C)
Object: ‘nMDS_R.o’
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64
Version: 0.3.6.2
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
Flavor: r-oldrel-osx-x86_64
Version: 0.3.6.2
Check: dependencies in R code
Result: NOTE
Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-oldrel-osx-x86_64
Version: 0.3.6.2
Check: S3 generic/method consistency
Result: WARN
Invalid MIT-MAGIC-COOKIE-1 key
See section ‘Generic functions and methods’ in the ‘Writing R
Extensions’ manual.
Flavor: r-oldrel-osx-x86_64
Version: 0.3.6.2
Check: replacement functions
Result: WARN
Invalid MIT-MAGIC-COOKIE-1 key
The argument of a replacement function which corresponds to the right
hand side must be named ‘value’.
Flavor: r-oldrel-osx-x86_64
Version: 0.3.6.2
Check: foreign function calls
Result: NOTE
Invalid MIT-MAGIC-COOKIE-1 key
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Flavor: r-oldrel-osx-x86_64
Version: 0.3.6.2
Check: R code for possible problems
Result: NOTE
Invalid MIT-MAGIC-COOKIE-1 keydata.reduction: no visible global function definition for ‘prcomp’
data.reduction: no visible global function definition for ‘hclust’
data.reduction: no visible global function definition for ‘as.dist’
data.reduction: no visible global function definition for ‘cor’
data.reduction: no visible global function definition for ‘dist’
heatmap1: no visible global function definition for ‘sd’
lineplot: no visible global function definition for ‘sd’
normalize: no visible global function definition for ‘sd’
profileplot3d : ColorFunction: no visible global function definition
for ‘rgb’
profileplot3d : ColorFunction: no visible global function definition
for ‘colorRamp’
profileplot3d: no visible global function definition for ‘sd’
profileplot3d: no visible global function definition for ‘gray’
Undefined global functions or variables:
as.dist colorRamp cor dist gray hclust prcomp rgb sd
Consider adding
importFrom("grDevices", "colorRamp", "gray", "rgb")
importFrom("stats", "as.dist", "cor", "dist", "hclust", "prcomp", "sd")
to your NAMESPACE file.
Flavor: r-oldrel-osx-x86_64
Version: 0.3.6.2
Check: for missing documentation entries
Result: WARN
Invalid MIT-MAGIC-COOKIE-1 key
All user-level objects in a package should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Flavor: r-oldrel-osx-x86_64
Version: 0.3.6.2
Check: for code/documentation mismatches
Result: WARN
Invalid MIT-MAGIC-COOKIE-1 key
Invalid MIT-MAGIC-COOKIE-1 key
Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-oldrel-osx-x86_64
Version: 0.3.6.2
Check: Rd \usage sections
Result: NOTE
Invalid MIT-MAGIC-COOKIE-1 key
The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Flavor: r-oldrel-osx-x86_64