CRAN Package Check Results for Package SPACECAP

Last updated on 2017-07-26 01:56:41.

Check Details

Version: 1.1.0
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: ‘tcltk’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1.0
Check: R code for possible problems
Result: NOTE
    SPACECAP: no visible global function definition for ‘tclRequire’
    SPACECAP: no visible global function definition for ‘tktoplevel’
    SPACECAP: no visible global function definition for ‘tclVar’
    SPACECAP : readFile1: no visible global function definition for
     ‘tclvalue’
    SPACECAP : readFile1: no visible global function definition for
     ‘tkgetOpenFile’
    SPACECAP : readFile1: no visible global function definition for
     ‘read.csv’
    SPACECAP : readFile1: no visible global function definition for
     ‘tkconfigure’
    SPACECAP : readFile1: no visible global function definition for
     ‘tkdelete’
    SPACECAP : readFile1: no visible global function definition for
     ‘tkinsert’
    SPACECAP : readFile1: no visible global function definition for
     ‘tkfocus’
    SPACECAP : readFile2: no visible global function definition for
     ‘tclvalue’
    SPACECAP : readFile2: no visible global function definition for
     ‘tkgetOpenFile’
    SPACECAP : readFile2: no visible global function definition for
     ‘read.csv’
    SPACECAP : readFile2: no visible global function definition for
     ‘tkconfigure’
    SPACECAP : readFile2: no visible global function definition for
     ‘tkdelete’
    SPACECAP : readFile2: no visible global function definition for
     ‘tkinsert’
    SPACECAP : readFile2: no visible global function definition for
     ‘tkfocus’
    SPACECAP : readFile3: no visible global function definition for
     ‘tclvalue’
    SPACECAP : readFile3: no visible global function definition for
     ‘tkgetOpenFile’
    SPACECAP : readFile3: no visible global function definition for
     ‘read.csv’
    SPACECAP : readFile3: no visible global function definition for
     ‘tkconfigure’
    SPACECAP : readFile3: no visible global function definition for
     ‘tkdelete’
    SPACECAP : readFile3: no visible global function definition for
     ‘tkinsert’
    SPACECAP : readFile3: no visible global function definition for
     ‘tkfocus’
    SPACECAP: no visible global function definition for ‘tkframe’
    SPACECAP: no visible global function definition for ‘tkpack’
    SPACECAP: no visible global function definition for ‘tktext’
    SPACECAP: no visible global function definition for ‘tkscrollbar’
    SPACECAP : <anonymous>: no visible global function definition for
     ‘tkyview’
    SPACECAP: no visible global function definition for ‘tkconfigure’
    SPACECAP : <anonymous>: no visible global function definition for
     ‘tkset’
    SPACECAP : SCRd.fn: no visible global function definition for
     ‘tkinsert’
    SPACECAP : SCRd.fn: no visible global function definition for ‘rbinom’
    SPACECAP : SCRd.fn: no visible global function definition for
     ‘tkProgressBar’
    SPACECAP : SCRd.fn: no visible global function definition for
     ‘setTkProgressBar’
    SPACECAP : SCRd.fn: no visible global function definition for ‘rnorm’
    SPACECAP : SCRd.fn: no visible global function definition for ‘runif’
    SPACECAP : SCRd.fn: no visible global function definition for ‘rbeta’
    SPACECAP : SCRd.fn: no visible binding for global variable ‘sd’
    SPACECAP : SCRd.fn: no visible global function definition for
     ‘write.csv’
    SPACECAP : SCRd.fn: no visible global function definition for ‘jpeg’
    SPACECAP : SCRd.fn: no visible global function definition for ‘plot’
    SPACECAP : SCRd.fn: no visible global function definition for ‘density’
    SPACECAP : SCRd.fn: no visible global function definition for
     ‘segments’
    SPACECAP : SCRd.fn: no visible global function definition for ‘legend’
    SPACECAP : SCRd.fn: no visible global function definition for ‘dev.off’
    SPACECAP : SCRd.fn: no visible global function definition for
     ‘tclArray’
    SPACECAP : SCRd.fn: no visible global function definition for
     ‘tclvalue’
    SPACECAP : SCRd.fn: no visible global function definition for
     ‘tkwidget’
    SPACECAP : SCRd.fn: no visible global function definition for ‘tklabel’
    SPACECAP : SCRd.fn: no visible global function definition for ‘tkgrid’
    SPACECAP : SCRd.fn: no visible global function definition for ‘tkpack’
    SPACECAP : run: no visible global function definition for ‘tclvalue’
    SPACECAP : run: no visible global function definition for ‘tkcget’
    SPACECAP : run: no visible global function definition for
     ‘tkmessageBox’
    SPACECAP : run: no visible global function definition for ‘tkinsert’
    SPACECAP : run: no visible global function definition for ‘tkfocus’
    SPACECAP : run: no visible global function definition for ‘tkdestroy’
    SPACECAP : run: no visible global function definition for ‘tkframe’
    SPACECAP : run: no visible global function definition for ‘tkpack’
    SPACECAP : exit: no visible global function definition for ‘tkdestroy’
    SPACECAP : helpme : <anonymous>: no visible global function definition
     for ‘tkmessageBox’
    SPACECAP : helpme: no visible global function definition for
     ‘tkmessageBox’
    SPACECAP: no visible global function definition for ‘tkwm.title’
    SPACECAP: no visible global function definition for ‘tkmenu’
    SPACECAP: no visible global function definition for ‘tkadd’
    SPACECAP: no visible global function definition for ‘tklabel’
    SPACECAP: no visible global function definition for ‘tkgrid’
    SPACECAP: no visible global function definition for ‘tkentry’
    SPACECAP: no visible global function definition for ‘tkbutton’
    SPACECAP : OnOk1: no visible global function definition for ‘tkinsert’
    SPACECAP : OnOk1: no visible global function definition for
     ‘tkmessageBox’
    SPACECAP : OnOk1: no visible global function definition for ‘tclvalue’
    SPACECAP : OnOk1: no visible global function definition for ‘tkfocus’
    SPACECAP : OnOk1: no visible global function definition for
     ‘tkconfigure’
    SPACECAP : OnReset1: no visible global function definition for
     ‘tkconfigure’
    SPACECAP: no visible global function definition for ‘tkgrid.configure’
    SPACECAP: no visible global function definition for ‘tkradiobutton’
    SPACECAP : onOk2: no visible global function definition for
     ‘tkconfigure’
    SPACECAP : onOk2: no visible global function definition for ‘tkinsert’
    SPACECAP : onReset2: no visible global function definition for
     ‘tkconfigure’
    SPACECAP : OnOk3: no visible global function definition for ‘tclvalue’
    SPACECAP : OnOk3: no visible global function definition for
     ‘tkmessageBox’
    SPACECAP : OnOk3: no visible global function definition for ‘tkfocus’
    SPACECAP : OnOk3: no visible global function definition for ‘tkinsert’
    SPACECAP : OnOk3: no visible global function definition for
     ‘tkconfigure’
    SPACECAP : onReset3: no visible global function definition for
     ‘tkconfigure’
    plotDetFunc: no visible global function definition for ‘curve’
    plotDetFunc: no visible global function definition for ‘arrows’
    plotDetFunc: no visible global function definition for ‘text’
    Undefined global functions or variables:
     arrows curve density dev.off jpeg legend plot rbeta rbinom read.csv
     rnorm runif sd segments setTkProgressBar tclArray tclRequire tclVar
     tclvalue text tkProgressBar tkadd tkbutton tkcget tkconfigure
     tkdelete tkdestroy tkentry tkfocus tkframe tkgetOpenFile tkgrid
     tkgrid.configure tkinsert tklabel tkmenu tkmessageBox tkpack
     tkradiobutton tkscrollbar tkset tktext tktoplevel tkwidget tkwm.title
     tkyview write.csv
    Consider adding
     importFrom("grDevices", "dev.off", "jpeg")
     importFrom("graphics", "arrows", "curve", "legend", "plot", "segments",
     "text")
     importFrom("stats", "density", "rbeta", "rbinom", "rnorm", "runif",
     "sd")
     importFrom("utils", "read.csv", "write.csv")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.1.0
Check: dependencies in R code
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 keyPackage in Depends field not imported from: ‘tcltk’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavor: r-oldrel-osx-x86_64

Version: 1.1.0
Check: S3 generic/method consistency
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    See section ‘Generic functions and methods’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-oldrel-osx-x86_64

Version: 1.1.0
Check: replacement functions
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    The argument of a replacement function which corresponds to the right
    hand side must be named ‘value’.
Flavor: r-oldrel-osx-x86_64

Version: 1.1.0
Check: foreign function calls
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
    See chapter ‘System and foreign language interfaces’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-oldrel-osx-x86_64

Version: 1.1.0
Check: for missing documentation entries
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    All user-level objects in a package should have documentation entries.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-oldrel-osx-x86_64

Version: 1.1.0
Check: for code/documentation mismatches
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    Invalid MIT-MAGIC-COOKIE-1 key
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-oldrel-osx-x86_64

Version: 1.1.0
Check: Rd \usage sections
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-oldrel-osx-x86_64

Version: 1.1.0
Check: examples
Result: ERROR
    Running examples in ‘SPACECAP-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: SPACECAP
    > ### Title: Fits spatially-explicit capture recapture models
    > ### Aliases: SPACECAP
    >
    > ### ** Examples
    >
    > SPACECAP()
    Invalid MIT-MAGIC-COOKIE-1 keyError in structure(.External(.C_dotTclObjv, objv), class = "tclObj") :
     [tcl] invalid command name "toplevel".
    Calls: SPACECAP ... tktoplevel -> tkwidget -> tcl -> .Tcl.objv -> structure
    Execution halted
Flavor: r-oldrel-osx-x86_64