Last updated on 2017-07-26 01:56:03.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.4 | 3.74 | 35.37 | 39.11 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.4 | 3.69 | 35.18 | 38.87 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.4 | 54.49 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.4 | 56.45 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 0.4 | 11.00 | 55.00 | 66.00 | NOTE | |
| r-patched-linux-x86_64 | 0.4 | 3.72 | 36.02 | 39.73 | NOTE | |
| r-patched-solaris-x86 | 0.4 | 85.90 | NOTE | |||
| r-release-linux-x86_64 | 0.4 | 3.81 | 35.24 | 39.05 | NOTE | |
| r-release-windows-ix86+x86_64 | 0.4 | 9.00 | 75.00 | 84.00 | NOTE | |
| r-release-osx-x86_64 | 0.4 | ERROR | ||||
| r-oldrel-windows-ix86+x86_64 | 0.4 | 8.00 | 53.00 | 61.00 | NOTE | |
| r-oldrel-osx-x86_64 | 0.4 | WARN |
Version: 0.4
Check: DESCRIPTION meta-information
Result: NOTE
Malformed Title field: should not end in a period.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 0.4
Check: top-level files
Result: NOTE
Non-standard file/directory found at top level:
‘doc’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.4
Check: dependencies in R code
Result: NOTE
Packages in Depends field not imported from:
‘Rglpk’ ‘corrplot’ ‘lattice’ ‘rgl’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.4
Check: R code for possible problems
Result: NOTE
BFD_Processor: no visible global function definition for ‘read.table’
BFD_Processor: no visible global function definition for ‘write.table’
BFD_Processor: no visible global function definition for ‘png’
BFD_Processor: no visible global function definition for ‘plot’
BFD_Processor: no visible global function definition for ‘dev.off’
BFD_Processor: no visible global function definition for ‘read.delim’
BFD_Processor: no visible global function definition for ‘pdf’
BFD_Processor: no visible global function definition for ‘levelplot’
BFD_Processor: no visible global function definition for ‘heatmap’
BFD_Processor: no visible global function definition for ‘cor’
BFD_Processor: no visible global function definition for ‘corrplot’
DEGREE_MEASURE: no visible global function definition for ‘write.table’
Exhaustive_double_deletion: no visible global function definition for
‘combn’
Exhaustive_double_deletion: no visible global function definition for
‘write.table’
Exhaustive_single_deletion: no visible global function definition for
‘write.table’
Exhaustive_single_deletion: no visible global function definition for
‘hist’
Exhaustive_single_deletion: no visible global function definition for
‘pdf’
Exhaustive_single_deletion: no visible global function definition for
‘barplot’
Exhaustive_single_deletion: no visible global function definition for
‘dev.off’
FBA_solve: no visible global function definition for ‘Rglpk_solve_LP’
FLUX_VAR_ANALYSIS: no visible global function definition for
‘write.table’
PERTURBATION_analysis: no visible global function definition for ‘plot’
PERTURBATION_analysis: no visible global function definition for ‘png’
PERTURBATION_analysis: no visible global function definition for
‘dev.off’
PERTURBATION_analysis: no visible global function definition for
‘write.table’
PHPP: no visible global function definition for ‘levelplot’
PHPP: no visible global function definition for ‘persp3d’
PHPP: no visible global function definition for ‘play3d’
PHPP: no visible global function definition for ‘spin3d’
PLOT_FVA_SPAN: no visible global function definition for ‘pdf’
PLOT_FVA_SPAN: no visible global function definition for ‘barplot’
PLOT_FVA_SPAN: no visible global function definition for ‘par’
PLOT_FVA_SPAN: no visible global function definition for ‘dev.off’
SINGLE_DEL_FLUXOME: no visible global function definition for ‘pdf’
SINGLE_DEL_FLUXOME: no visible global function definition for ‘barplot’
SINGLE_DEL_FLUXOME: no visible global function definition for ‘par’
SINGLE_DEL_FLUXOME: no visible global function definition for ‘dev.off’
flux_difference_plotter: no visible global function definition for
‘pdf’
flux_difference_plotter: no visible global function definition for
‘barplot’
flux_difference_plotter: no visible global function definition for
‘par’
flux_difference_plotter: no visible global function definition for
‘dev.off’
Undefined global functions or variables:
Rglpk_solve_LP barplot combn cor corrplot dev.off heatmap hist
levelplot par pdf persp3d play3d plot png read.delim read.table
spin3d write.table
Consider adding
importFrom("grDevices", "dev.off", "pdf", "png")
importFrom("graphics", "barplot", "hist", "par", "plot")
importFrom("stats", "cor", "heatmap")
importFrom("utils", "combn", "read.delim", "read.table", "write.table")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 0.4
Check: package dependencies
Result: ERROR
Package required but not available: ‘Rglpk’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-release-osx-x86_64
Version: 0.4
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
Flavor: r-oldrel-osx-x86_64
Version: 0.4
Check: dependencies in R code
Result: NOTE
Invalid MIT-MAGIC-COOKIE-1 keyPackages in Depends field not imported from:
‘Rglpk’ ‘corrplot’ ‘lattice’ ‘rgl’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Flavor: r-oldrel-osx-x86_64
Version: 0.4
Check: S3 generic/method consistency
Result: WARN
Invalid MIT-MAGIC-COOKIE-1 key
See section ‘Generic functions and methods’ in the ‘Writing R
Extensions’ manual.
Flavor: r-oldrel-osx-x86_64
Version: 0.4
Check: replacement functions
Result: WARN
Invalid MIT-MAGIC-COOKIE-1 key
The argument of a replacement function which corresponds to the right
hand side must be named ‘value’.
Flavor: r-oldrel-osx-x86_64
Version: 0.4
Check: foreign function calls
Result: NOTE
Invalid MIT-MAGIC-COOKIE-1 key
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Flavor: r-oldrel-osx-x86_64
Version: 0.4
Check: for missing documentation entries
Result: WARN
Invalid MIT-MAGIC-COOKIE-1 key
All user-level objects in a package should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Flavor: r-oldrel-osx-x86_64
Version: 0.4
Check: for code/documentation mismatches
Result: WARN
Invalid MIT-MAGIC-COOKIE-1 key
Invalid MIT-MAGIC-COOKIE-1 key
Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-oldrel-osx-x86_64
Version: 0.4
Check: Rd \usage sections
Result: NOTE
Invalid MIT-MAGIC-COOKIE-1 key
The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Flavor: r-oldrel-osx-x86_64